Metagenome / Metatranscriptome Family F053178

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053178
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	99 residues
Representative Sequence	MVKTWLVRLELARDDDGSLSDEGIDALTRLLAEDRVKPVLTRGDSGTVLVQMTLDARDDMAARSAAERMLRDGANTVWSARGLPPFTIAFVDATELRS
Number of Associated Samples	87
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.33 %
% of genes near scaffold ends (potentially truncated)	28.37 %
% of genes from short scaffolds (< 2000 bps)	83.69 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.738 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (37.589 % of family members)
Environment Ontology (ENVO)	Unclassified (39.716 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.099 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.16% β-sheet: 28.57% Coil/Unstructured: 41.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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SCOP family	SCOP domain	Representative PDB	TM-score
d.280.1.1: Sulfolobus fructose-1,6-bisphosphatase-like	d3t2ca_	3t2c	0.74
d.58.57.1: Transposase IS200-like	d2vjva1	2vjv	0.73
d.128.1.0: Glutamine synthetase/guanido kinase	d2bvca2	2bvc	0.72
d.128.1.0: Glutamine synthetase/guanido kinase	d4lnoa2	4lno	0.72
d.58.57.1: Transposase IS200-like	d2f5ga_	2f5g	0.7

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF13466	STAS_2	4.96
PF01510	Amidase_2	4.26
PF06210	DUF1003	2.84
PF14018	DUF4234	2.84
PF00903	Glyoxalase	2.13
PF00582	Usp	1.42
PF04069	OpuAC	1.42
PF00528	BPD_transp_1	1.42
PF00248	Aldo_ket_red	1.42
PF05988	DUF899	1.42
PF02417	Chromate_transp	1.42
PF01934	HepT-like	1.42
PF07883	Cupin_2	1.42
PF13191	AAA_16	0.71
PF12680	SnoaL_2	0.71
PF00353	HemolysinCabind	0.71
PF00440	TetR_N	0.71
PF08495	FIST	0.71
PF00118	Cpn60_TCP1	0.71
PF12730	ABC2_membrane_4	0.71
PF13305	TetR_C_33	0.71
PF12770	CHAT	0.71
PF01740	STAS	0.71
PF08327	AHSA1	0.71
PF13581	HATPase_c_2	0.71
PF00355	Rieske	0.71
PF03861	ANTAR	0.71
PF03840	SecG	0.71
PF03706	LPG_synthase_TM	0.71
PF05048	NosD	0.71
PF14534	DUF4440	0.71
PF12840	HTH_20	0.71
PF04239	DUF421	0.71
PF07730	HisKA_3	0.71
PF07690	MFS_1	0.71
PF07311	Dodecin	0.71
PF01545	Cation_efflux	0.71
PF01370	Epimerase	0.71
PF07366	SnoaL	0.71
PF03144	GTP_EFTU_D2	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG4420	Uncharacterized membrane protein	Function unknown [S]	2.84
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	1.42
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	1.42
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	1.42
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	1.42
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.71
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.71
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.71
COG1314	Protein translocase subunit SecG	Intracellular trafficking, secretion, and vesicular transport [U]	0.71
COG2323	Uncharacterized membrane protein YcaP, DUF421 family	Function unknown [S]	0.71
COG3287	FIST domain protein MJ1623, contains FIST_N and FIST_C domains	Signal transduction mechanisms [T]	0.71
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.71
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.71
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.71
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.71
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.71
COG4398	Small ligand-binding sensory domain FIST	Signal transduction mechanisms [T]	0.71
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.71
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.74 %
Unclassified	root	N/A	43.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.74 %
Unclassified	root	N/A	43.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.74 %
Unclassified	root	N/A	43.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.26 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.26 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	29.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.42 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.26 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.31 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.84 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.42 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.71 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.71 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.26 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.51 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.84 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.42 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.42 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.71 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.71 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.26 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.51 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.84 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	1.42 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.71 %
Psychrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter	0.71 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.71 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.71 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.71 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.26 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.51 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.84 %
unclassified Lachnospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae	1.42 %
Psychrobacter lutiphocae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → Psychrobacter lutiphocae	0.71 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.71 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.71 %
Frigoribacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frigoribacterium	0.71 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.71 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.26 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.51 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.84 %
Lachnospiraceae bacterium MD308	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium MD308	1.42 %
unclassified Frigoribacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frigoribacterium → unclassified Frigoribacterium	0.71 %
Psychrobacter lutiphocae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → Psychrobacter lutiphocae	0.71 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.71 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.71 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.71 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.26 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.51 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.84 %
Lachnospiraceae bacterium MD308	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium MD308	1.42 %
Frigoribacterium sp. 9N	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frigoribacterium → unclassified Frigoribacterium → Frigoribacterium sp. 9N	0.71 %
Psychrobacter lutiphocae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → Psychrobacter lutiphocae	0.71 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.71 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.71 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.71 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005174\|Ga0066680_10495001	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300005174\|Ga0066680_10686924	Not Available	630	Open in IMG/M
3300005174\|Ga0066680_10938546	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005177\|Ga0066690_10336631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1022	Open in IMG/M
3300005180\|Ga0066685_10543882	Not Available	801	Open in IMG/M
3300005181\|Ga0066678_10300856	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300005184\|Ga0066671_10155325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1338	Open in IMG/M
3300005445\|Ga0070708_100055902	All Organisms → cellular organisms → Bacteria	3510	Open in IMG/M
3300005445\|Ga0070708_100128273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2346	Open in IMG/M
3300005445\|Ga0070708_100737918	Not Available	926	Open in IMG/M
3300005467\|Ga0070706_101925478	Not Available	536	Open in IMG/M
3300005536\|Ga0070697_101153055	Not Available	690	Open in IMG/M
3300005536\|Ga0070697_101479185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium MD308	607	Open in IMG/M
3300005556\|Ga0066707_10490057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	798	Open in IMG/M
3300005558\|Ga0066698_10786963	Not Available	618	Open in IMG/M
3300005560\|Ga0066670_10056706	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300005561\|Ga0066699_10873635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → Psychrobacter lutiphocae	629	Open in IMG/M
3300005575\|Ga0066702_10355940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	890	Open in IMG/M
3300006031\|Ga0066651_10778076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium MD308	518	Open in IMG/M
3300006034\|Ga0066656_10387271	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300006046\|Ga0066652_100421462	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300006794\|Ga0066658_10750314	Not Available	544	Open in IMG/M
3300006797\|Ga0066659_11808087	Not Available	517	Open in IMG/M
3300007076\|Ga0075435_101110133	Not Available	691	Open in IMG/M
3300009012\|Ga0066710_100072988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4417	Open in IMG/M
3300009012\|Ga0066710_100099217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3887	Open in IMG/M
3300009012\|Ga0066710_100321444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2276	Open in IMG/M
3300009012\|Ga0066710_100484224	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300009012\|Ga0066710_101195868	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300009012\|Ga0066710_104118730	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300009012\|Ga0066710_104856189	Not Available	503	Open in IMG/M
3300009053\|Ga0105095_10108858	Not Available	1505	Open in IMG/M
3300009088\|Ga0099830_10138777	Not Available	1859	Open in IMG/M
3300009089\|Ga0099828_11066057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	719	Open in IMG/M
3300009089\|Ga0099828_11636136	Not Available	567	Open in IMG/M
3300009090\|Ga0099827_10108017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2223	Open in IMG/M
3300009090\|Ga0099827_10676539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	891	Open in IMG/M
3300009090\|Ga0099827_11360328	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300009091\|Ga0102851_12531112	Not Available	587	Open in IMG/M
3300009137\|Ga0066709_101601616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	932	Open in IMG/M
3300009137\|Ga0066709_101790757	Not Available	863	Open in IMG/M
3300009137\|Ga0066709_102441019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	708	Open in IMG/M
3300009137\|Ga0066709_103671926	Not Available	557	Open in IMG/M
3300009137\|Ga0066709_103903349	Not Available	542	Open in IMG/M
3300009147\|Ga0114129_11117487	All Organisms → cellular organisms → Bacteria → Terrabacteria group	986	Open in IMG/M
3300009147\|Ga0114129_11532936	Not Available	818	Open in IMG/M
3300009147\|Ga0114129_12161134	Not Available	670	Open in IMG/M
3300009171\|Ga0105101_10101187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1398	Open in IMG/M
3300009837\|Ga0105058_1130811	Not Available	602	Open in IMG/M
3300010320\|Ga0134109_10440016	Not Available	528	Open in IMG/M
3300010335\|Ga0134063_10449505	Not Available	638	Open in IMG/M
3300012189\|Ga0137388_11717626	Not Available	561	Open in IMG/M
3300012201\|Ga0137365_10169532	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300012204\|Ga0137374_10039138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5048	Open in IMG/M
3300012204\|Ga0137374_10047820	All Organisms → cellular organisms → Bacteria	4443	Open in IMG/M
3300012204\|Ga0137374_10096400	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2805	Open in IMG/M
3300012204\|Ga0137374_10185506	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300012204\|Ga0137374_10338006	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1219	Open in IMG/M
3300012204\|Ga0137374_10372420	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300012204\|Ga0137374_10455458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1003	Open in IMG/M
3300012204\|Ga0137374_10996666	All Organisms → cellular organisms → Bacteria → Terrabacteria group	606	Open in IMG/M
3300012206\|Ga0137380_10003944	All Organisms → cellular organisms → Bacteria	12976	Open in IMG/M
3300012206\|Ga0137380_10109347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frigoribacterium → unclassified Frigoribacterium → Frigoribacterium sp. 9N	2526	Open in IMG/M
3300012206\|Ga0137380_11402749	Not Available	583	Open in IMG/M
3300012208\|Ga0137376_10067268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2972	Open in IMG/M
3300012208\|Ga0137376_11058924	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300012209\|Ga0137379_10446607	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300012209\|Ga0137379_10558411	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300012210\|Ga0137378_10005847	All Organisms → cellular organisms → Bacteria	10667	Open in IMG/M
3300012210\|Ga0137378_11474290	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300012211\|Ga0137377_10181242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2022	Open in IMG/M
3300012211\|Ga0137377_10819693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300012211\|Ga0137377_11664261	Not Available	560	Open in IMG/M
3300012349\|Ga0137387_10010718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5376	Open in IMG/M
3300012350\|Ga0137372_10026128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5403	Open in IMG/M
3300012350\|Ga0137372_10240891	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300012350\|Ga0137372_10663987	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300012350\|Ga0137372_10833769	Not Available	660	Open in IMG/M
3300012353\|Ga0137367_10061846	All Organisms → cellular organisms → Bacteria	2794	Open in IMG/M
3300012353\|Ga0137367_10200009	Not Available	1448	Open in IMG/M
3300012353\|Ga0137367_11093411	Not Available	539	Open in IMG/M
3300012354\|Ga0137366_10188192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1546	Open in IMG/M
3300012355\|Ga0137369_10022022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6002	Open in IMG/M
3300012355\|Ga0137369_10178018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1664	Open in IMG/M
3300012355\|Ga0137369_10290250	Not Available	1218	Open in IMG/M
3300012355\|Ga0137369_10441296	Not Available	930	Open in IMG/M
3300012356\|Ga0137371_10405236	Not Available	1057	Open in IMG/M
3300012356\|Ga0137371_11295154	Not Available	539	Open in IMG/M
3300012360\|Ga0137375_10973953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300012373\|Ga0134042_1046418	Not Available	731	Open in IMG/M
3300012380\|Ga0134047_1043224	Not Available	569	Open in IMG/M
3300012532\|Ga0137373_10128480	Not Available	2168	Open in IMG/M
3300012532\|Ga0137373_10161945	Not Available	1877	Open in IMG/M
3300012532\|Ga0137373_10342100	Not Available	1177	Open in IMG/M
3300012532\|Ga0137373_10638653	Not Available	799	Open in IMG/M
3300012532\|Ga0137373_11084552	Not Available	574	Open in IMG/M
3300012972\|Ga0134077_10301751	Not Available	673	Open in IMG/M
3300014154\|Ga0134075_10562299	Not Available	515	Open in IMG/M
3300014318\|Ga0075351_1114300	Not Available	600	Open in IMG/M
3300014321\|Ga0075353_1034626	Not Available	988	Open in IMG/M
3300015359\|Ga0134085_10626770	Not Available	502	Open in IMG/M
3300015371\|Ga0132258_11740833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1571	Open in IMG/M
3300017997\|Ga0184610_1042577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1319	Open in IMG/M
3300018056\|Ga0184623_10017180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3180	Open in IMG/M
3300018056\|Ga0184623_10029393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2470	Open in IMG/M
3300018061\|Ga0184619_10435249	Not Available	587	Open in IMG/M
3300018063\|Ga0184637_10686036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300018064\|Ga0187773_10242088	Not Available	981	Open in IMG/M
3300018071\|Ga0184618_10243230	Not Available	760	Open in IMG/M
3300018074\|Ga0184640_10201832	Not Available	898	Open in IMG/M
3300018074\|Ga0184640_10237604	All Organisms → cellular organisms → Bacteria → Terrabacteria group	826	Open in IMG/M
3300018076\|Ga0184609_10109008	Not Available	1250	Open in IMG/M
3300018077\|Ga0184633_10613171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300018078\|Ga0184612_10036227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2559	Open in IMG/M
3300018079\|Ga0184627_10604438	Not Available	551	Open in IMG/M
3300018082\|Ga0184639_10216539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1015	Open in IMG/M
3300018082\|Ga0184639_10227021	Not Available	989	Open in IMG/M
3300018433\|Ga0066667_10315059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1225	Open in IMG/M
3300018468\|Ga0066662_10683598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	976	Open in IMG/M
3300018468\|Ga0066662_11079727	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300018482\|Ga0066669_11600841	Not Available	595	Open in IMG/M
3300025910\|Ga0207684_11535566	Not Available	541	Open in IMG/M
3300026552\|Ga0209577_10273199	Not Available	1269	Open in IMG/M
3300027731\|Ga0209592_1277255	Not Available	577	Open in IMG/M
3300027862\|Ga0209701_10360025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	821	Open in IMG/M
3300027875\|Ga0209283_10119220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1737	Open in IMG/M
3300027875\|Ga0209283_10367785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	941	Open in IMG/M
3300027882\|Ga0209590_10234066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1169	Open in IMG/M
3300028705\|Ga0307276_10141446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300028828\|Ga0307312_11088731	Not Available	529	Open in IMG/M
3300028878\|Ga0307278_10137720	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300030987\|Ga0308155_1001352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1396	Open in IMG/M
3300030990\|Ga0308178_1014701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1161	Open in IMG/M
3300031081\|Ga0308185_1025639	Not Available	696	Open in IMG/M
3300031081\|Ga0308185_1054368	Not Available	520	Open in IMG/M
3300031421\|Ga0308194_10118151	Not Available	784	Open in IMG/M
3300033416\|Ga0316622_100674629	Not Available	1194	Open in IMG/M
3300034644\|Ga0370548_068603	Not Available	667	Open in IMG/M
3300034680\|Ga0370541_003618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1317	Open in IMG/M
3300034680\|Ga0370541_003854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1291	Open in IMG/M
3300034681\|Ga0370546_016441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	940	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.45%
Host-Associated	Host-Associated	3.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.69%
Aquatic	Environmental → Aquatic	12.77%
Plants	Host-Associated → Plants	3.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.69%
Sediment	Environmental → Aquatic → Sediment	9.93%
Freshwater	Environmental → Aquatic → Freshwater	2.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.93%
Loam	Environmental → Terrestrial → Soil → Loam	4.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.84%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.13%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.71%
Sand	Environmental → Terrestrial → Soil → Sand	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.84%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.13%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	37.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.35%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.84%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.13%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.42%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.71%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031081	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066680_104950012	3300005174	Soil	KTWLVRLELARDDDGSLSDKGIEAPTQLLDKAQVQPVMARGDSGTVFVQMTVDARDGMAARSAAEEALRDGANKVWSALGLPPFTITFLDATSDRP*
Ga0066680_106869241	3300005174	Soil	MVKTWLVRLELARDDDGSLSDEGIDALTQLLAEGHVKPVLTRGPSGTVLVQMTLDAGDYVAARSAAEHMLRDGANNVWSALGLPPFTIAFVDATEGLR*
Ga0066680_109385461	3300005174	Soil	MVKTWLVRLELARDDDGSLSQEGVDALSQLLSEGHVKPVLTQGDSGTVLVQMTLDAGDQVAARSAAERMLRGGANTVWAALGLPPFTIAFVEVTEAAR*
Ga0066690_103366311	3300005177	Soil	VRRYNQTPMVKRWLVRLELARDDHGSLSDEVIDALTQLLAEGHANPVLTRGDSGTVRVQMTLEARDHMAARSAAEHMLREGARNVWSALGLPPFTIAFVDVTEGPR*
Ga0066685_105438823	3300005180	Soil	MVKTWLVRLEVARDDDGSLSDQGIDALTQVLAEGHVNPVLTRGGSGTMIVQMTLEARDGNAARTAAERMLRDGANSVWSALGLPPFTIAFLDATEGPR*
Ga0066678_103008562	3300005181	Soil	MVKTWQVRLELARDDNGSLSDEGIKALTDLLAERNAKPVVTRGESGTVLVQMTIDARDDMAARSAAEAMLREGATTVWSALGLPPFTIAFVDATKSRP*
Ga0066671_101553252	3300005184	Soil	MIRSWLVRLELARDDDGSLSDEGIEALSHRLAEHQVKPVVTRGDSGTVLVQVMLDARDDMAARAAAEHMLRDGANVVWSAFGLPPFTIAFVDATEAHR*
Ga0070708_1000559024	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VNLSGPHLYNQEEMVKTWVVRLELARDDDASLSDEGVRALTDLLAEHHVKPVLSRGDSGTILVQMTLDARDKMAARSAAERALRDGANTVWSALGLPPFTIAFVDATEGPR*
Ga0070708_1001282732	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVKTWLIRVELARDDDGSLSDDGIVALTGLLAADHVKPVLTRGASGTVLVQITLDARDNMTARSAAERMLRAGASKVWSDLGLPPFTIAFVDATEVPR*
Ga0070708_1007379182	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVKTWLVRLELARDDDGSLSDEGIDALTRLLAEDHVQPVLARGDSGTVLVQMTLDARDVMAARSAAEHMLRDGANTVWSALGLPPFTIAFLDATEGRR*
Ga0070706_1019254781	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MVKRWVVRLELARDDDGSLSDEGIEALTQLLDKDQVQPVIARGDSGTVLIQMTLDATDDMAARSAAEEALRNGANNVWSALGLPPFTITF
Ga0070697_1011530552	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ARDDNGALSDEAIRSLTDLLAEHSVNPVLTRGDSGTVLVELTLDARTDVAARSAAEALLRKGADTVWSALGLPPFTIAFGGATEARR*
Ga0070697_1014791851	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MVKTWQVRLELARDDNGSLSDEGIKALTDLLAERNAKPVVTRGESGTVLVQMTIDARDDMAARSAAEAMLREGANTVWSALGLPPFTIAFVDATKSRP*
Ga0066707_104900572	3300005556	Soil	MGRMDKTWLVRLELARDDDGSLSDEGVDSLTHLLAEDNVQPAITRGDSGTVNVQMTLEARDDMAARSAAERMLREGANKVWSALGLPPFTIAFLDATESRG*
Ga0066698_107869632	3300005558	Soil	LLPVCAGLRETVRHPATTIKEPMVKTWQVRLELARDDNGSLSDEGIKALTDLLAERNAKPVVTRGESGTVLVQMTIDARDDMAARSAAEAMLREGANTVWSALGLPPFTIAFVDATKGRP
Ga0066670_100567063	3300005560	Soil	MIRSWLVRLELARDDDGSLSDEGIEALSHRLAEHQVKPVVTRGDSGTVLVQVMLDARDDMAARAAAEHMLRDGANVVWSAFGLPPFTIAFVDATEDHR*
Ga0066699_108736351	3300005561	Soil	MVKKWLVRLELARDDDGSLSDEGIDALTQLLAEGHATPVLTRGDSGTVLVQMTLDARDDMAARSVANQVLRDGANAVWSAFGLPPFTITFL
Ga0066702_103559401	3300005575	Soil	MIRSWLVRLELARDDDGSLSDEGIEALSHRLAEHQVKPVVTRGDSGTVLVQVTLEARDDMAARAAAEHMLRDGANAVWSAFGLPPFTIAFVDATEDHR*
Ga0066651_107780761	3300006031	Soil	MARQSELVGSSTAVQSELMVKSWVVRLELARDDDGSLSDEGIDALTRLLAEEHVKPVLTRGDSGTVLVQVALDARDDMAARSAAEHMLRDGANRVWSALGLPPFTIVFCGAAEGRH*
Ga0066656_103872712	3300006034	Soil	KTWQVRLELARDDNGSLSDEGIKALTDLLAERNVKPVVIRGESGTVLVQMTIDARDDMAARSVAEAMLREGANTVWSALGLPPFTIAFVDATKSRP*
Ga0066652_1004214622	3300006046	Soil	VLSRVEMFSRVETGRRGSQWMAPQRESVASSRPLQSRLMIKSWVVRLELARDDDGSLSDEGIDALTRLLAEEHVKPVLTRGDSGTVLVQVTLDARDDMAARSTAEHMLRDGANSVWSALGLPPFTIAFLDAAEGRR*
Ga0066658_107503142	3300006794	Soil	MVKTWQVRLELARDDNGSLSDEGIKALTDLLAERNAKPVVTRGESGTVLVQMMIDARDDMAARSTAEAMLREGANTVWSALGLPPFTIAFVDATKSRP*
Ga0066659_118080871	3300006797	Soil	MLRAWLVRLELARDDDGSLSDEGIEALTQLLTERHVKPALTRGDSSTVLVQMTLDARDDMAARTAAEHMLRDGANTVWSALGLPPFTIAFVDATEGHR*
Ga0075435_1011101332	3300007076	Populus Rhizosphere	MVKTWLIRLELARDDDISLSDEGIDALTEVLAEDHVKPALTRGVSGTVLVQMRLDARDGRAAKATAERMLRDGADRVWSALGLPPFTIAFLDATEERL*
Ga0066710_1000729885	3300009012	Grasslands Soil	MGRMDKTWLVRLELARDDDGSLSDEGVDSLTHLLAEDNVQPAITRGDSGTVNVQMTLEARDDMAARSAAERMLREGANKVWSALGLPPFTIAFLDATESRG
Ga0066710_1000992173	3300009012	Grasslands Soil	MVRTWLVRLELARDDDGSLSDEGIDALTRLLAESHVKAGLSRGDSGTILVQLTLDARDAMAARSAAERALREGANSVWQARGLPPFTIAFVDSTEGPG
Ga0066710_1003214443	3300009012	Grasslands Soil	MVKTWLVRLELARDDDGSLSDEGIGALTDLLAEDHVKPVLTRGDSGTVVVQVTLDARDEMAARSAAEHMLRTGANTVWSARGLPPFTIAFVGVTEARP
Ga0066710_1004842243	3300009012	Grasslands Soil	VVPRGSRPAGPTDLRHYNQERMVRTWLVRLELARDDDGSLSNEGIDALTKLLAKDHVEPLLTRGESGTILVQMTLDARDDMAARSAANQILRDGANAVWSALGLPPFTITFLDATEGRS
Ga0066710_1011958683	3300009012	Grasslands Soil	MVKSWVVRLELARDDDGSLSSEGIDSLTRLLVKGNMQPVLTRGDSGTILVQVTLDARDEMAARSSAERVLRDGANSVWAALGLPPFTIVFLGAAEGRR
Ga0066710_1041187302	3300009012	Grasslands Soil	MVKTWLVRLEVARDDDGPLSDEGIDALTSLLAQGTGKPELTRGDSGTVHVRMTLEARDDMEARSAAERMLRECANTVWLAQGLPPFTI
Ga0066710_1048561891	3300009012	Grasslands Soil	LVRVSWLPDLGHYNQGPMVKTWVVRLELARDDDGSLSDEGIDALTRLLDEHHVKPILTRGDLGTVLVQMTLDARDEMAARSAAERTLRDGANTVWSALGLPPFTITFVAATEGPR
Ga0105095_101088583	3300009053	Freshwater Sediment	MIKTWRVRLELARDDDGPLSDEGVDALTHLLAEDGLKPFVIRGEKGAVVVQMMLDARDDRAVRSVAEHVLHDHASTVWSTLGLPPFTITFVDATEDAS*
Ga0099830_101387772	3300009088	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSDEGIDALTQLLGEGHVKPVLARGDSGTVLVQMTLDAGDYVAARSAAEHMLRDGANTVWSALRLPPFTIAFVDATEGLR*
Ga0099828_110660572	3300009089	Vadose Zone Soil	LVRLELARDDDGSLSDEGIDALTQLLAEGHVKPVLTRGDSGTVLVQMTLDAGDYVAARSAAEHMLRDGANNVWSALGLPPFTIAFVDATEGHR*
Ga0099828_116361361	3300009089	Vadose Zone Soil	MVKTWLVRLELARHDDGSLSQEGTDALSQLLSEGHVKPVLTQGDSGTVLVQMTLDAGDQVAARSAAEHMLRDGANTVWAALGLPPFTIAFVEVTEAPR*
Ga0099827_101080171	3300009090	Vadose Zone Soil	ELARDDNGCLSDEGIDALTKLLAEHHAKPVVTRGDSGTVLVQMTLDARDDMAARSAAEAVLREGANTVWSALGLPPFTIAFVDATQDRP*
Ga0099827_106765392	3300009090	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSDEGIDALTQLLAEGHVKPVLTRGDSGTVLVQMTLDAGDYVAARSAAEHMLRDGANNVWSALGLPPFTIAFVDATEGHR*
Ga0099827_113603281	3300009090	Vadose Zone Soil	MIKTWTVRLDLARDDDGPLSDEGIEALTRLLSENQMNPTVTRGDLGTVTVQLTIEARDDMAARSAAESVLRDGANKVWSELGLPPFTISFVDAQEARR*
Ga0102851_125311121	3300009091	Freshwater Wetlands	MIKAWRVRLELARDDDGPLSDEGVDALTHLLAGDDLKPVVTRGEMGAVVVQMTLDSRDDQAVRSVAEHMLHEHASTVWSTLGLPPFTITFVDATESAD*
Ga0066709_1016016162	3300009137	Grasslands Soil	MVKTWLVRLEVARDDDGPLSDEGIDALTSLLAQGPGKPELTRGDSGTVHVRMTLEARDDMEARSAAERMLREGANTVWLAQGLPPFTITFVDAKEIGR*
Ga0066709_1017907571	3300009137	Grasslands Soil	MVRTWLVRLELARDDDGSLSDEGIDALTRLLAESHVKAVLSRGDSGTILVQLTLDARDAMAARSAAERALREGANSVWQARGLPPFTIAFVDSTEGPG*
Ga0066709_1024410192	3300009137	Grasslands Soil	MVRTWLVRLELARDDDGSLSDQGIDALTKVLGEGHVKPVLTRGDSGTMIVQVTIEARDDSAARTAAERMLRDSANNVWSALGLPPFTIAFLDAKEGPR*
Ga0066709_1036719261	3300009137	Grasslands Soil	MDKTWLVRLELARDDDGSLSDEGVDSLTHLLAEDNVQPAITRGDSGTVNVQMTLEARDDMAARSAAERMLREGANKVWSALGLPPFTIAFLDATESRG*
Ga0066709_1039033492	3300009137	Grasslands Soil	MVKTWLVRMELARDDNGALSDEAIRTLTDLLAEHSVNPVLTRGDSGTVLVELTLDARTDVAARSAAEALLRKGADTVWSALALPPFTIAFGGATEARR*
Ga0114129_111174872	3300009147	Populus Rhizosphere	MDKTWTVRLELARDDDGALSDEGLASLTRLLDEEDMKPVLSRGQLGTVLIQLTISARDDMSARSAAERALREGATTVWAALGLPPFTIAFVDASEGPRQPGPAAG*
Ga0114129_115329361	3300009147	Populus Rhizosphere	MITTWRVRLELARDDDGVLSDDEIGALSEMLAQEHMTSELSHGDSGTVLVQMTIDARDDMAAKSAAERILRLSANSVWSARGLPPFTIAFMDALEGPREAPGAVEQAQE*
Ga0114129_121611342	3300009147	Populus Rhizosphere	MIKTWVVRVELARDDDGALSDEGLEALTQLLADEDVKPVLSRGDSGTVRVQMTIEARDDMAARSAAERFLRDGANTVWAARGLPPFTIAFVDASEAPR*
Ga0105101_101011872	3300009171	Freshwater Sediment	MIKTWRVRLELARDDDGPLSDEVVDALTHLLAEDDLKPFVIRGEMGAVVVQMMLDARDDRAVRSVAEHVLHDHASTVWSTLGLPPFTITFVDATEDAS*
Ga0105058_11308112	3300009837	Groundwater Sand	VKNAVSDVYNPLRMVKTWLVRLELARDDDGSLSDEGIGALTDLLAASHVKPVLTRGDSGTILVQVTLEARNDMAARSAAEDMLRNGANTVWSARGLPPFTIAFVGVEEVPR*
Ga0134109_104400162	3300010320	Grasslands Soil	MVKTWLVRLELARDDDGSLSDEGVDSLTHLLAEDNVQPVITRGDSGTVLVQMTLDARDDMAARSTAERMLRERANKVWSALGLPPFTIAFLDAAESRG*
Ga0134063_104495051	3300010335	Grasslands Soil	MIKTWLVRLELARDDDGALSDEGIDALTHLLAANVKPVITRGDSGSVLVQMTVEARDDMAARSAAERMLRDGANSVWAARGLPPFTIAFVGTAEAPK*
Ga0137388_117176262	3300012189	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSDEGIDALTQLLAEGHVKPVLTRGDSGTVLVQMTLDAGDYVAARSAAEHMLRDGANNVWSALGLPPFTIAFVDAMEGPRQVGLPVHEHEP*
Ga0137365_101695323	3300012201	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSDEGVDSLTHLLAEDNVQPVITRGDSGTVLVQMTLDARDDMAARSVAERMLREGANKVWSELGLPPFTIAFRDAKESRA*
Ga0137374_100391383	3300012204	Vadose Zone Soil	MVKTWLVRLEVARDDAGPLSDEGIEALTRLLAEDHAKPVLTRGDSGTVLVQVTVDARPDMAARFAAESMLRNGANTVWSALGLPPFTIAFVDATEGPRQAG*
Ga0137374_100478202	3300012204	Vadose Zone Soil	MVKTWVVRLELARDDDGALSDEGVDALTVLLAEHHTKPVLTRGDSGTVLVQMTLDARDDMAARSAAEAMLRGSANTVWSALGLPPFTISFVDATQGRP*
Ga0137374_100964004	3300012204	Vadose Zone Soil	MVKTWLVRLELARDDNGALSDEGVDSLTHLLAQDDVQPLITRGDSGTVLVQMTLDARDDMAARSTAERMLREGANKVWSALGLPPFTIAFLDATEGRG*
Ga0137374_101855063	3300012204	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSDEGVDALTSLLAEDQVQPVLTRGDSGTVLVQMTLDARDDMAARSAAERMLREGANRVWSALGLPPFTIAFLDATERRG*
Ga0137374_103380062	3300012204	Vadose Zone Soil	MVKTWLVRLQLSRDDDGSLSDQGIEALTQLLAEDKASPIVTRGDSGTVLVQVTLQARDDRAARSAAEQALRDGATKVWSSLGLPPFTIAYIDATEAPR*
Ga0137374_103724201	3300012204	Vadose Zone Soil	MDKRWSVRLELARDDGGSLSDEGIDALRQLLVQGNAKPVLTQGDSGTVLVQMTLDARDHMAARSVAEHMLRDGAHTVWSALGLPPFTIAFVEATEGPR*
Ga0137374_104554581	3300012204	Vadose Zone Soil	APATTIKEQMVKTWVVRLELARDDDGALSDEGVDALTQLLSEKHVKPVLTRGDSGTVLVQMTLDARDDMAARSAAEAMLRGSAYTVWSALGLPPFTISFVDAKQGRP*
Ga0137374_109966661	3300012204	Vadose Zone Soil	MVKAWLVRLELARDDDGSLSDEGIGALTDLLAEDHVKPVLTRGDSGTVLVQLTLDARDEMAARSAAEHLLRDGANTVWSARGLPPFTIAFVDVTEV*
Ga0137380_100039449	3300012206	Vadose Zone Soil	MMRGWRVRLHLARDDDGPLSDEGVEALTGLLSQDQAAKPAVTRGDLGTVVVQVTIDARDDITARSAAERLLREGANKVWSELGLPPFTIAYVDAVEERH*
Ga0137380_101093473	3300012206	Vadose Zone Soil	MVKSWLVRLELARDDNGSLSDEGIEALAKLLAKGYAKPVLTRGDAGTVLVQLTLEARDDMAAKSAAERTLREGANSVWSALGLPPFTIAFVDATEAPR*
Ga0137380_114027491	3300012206	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSDEGVDSLTHLLAEDNVQPVITRGDSGTVLVQMTLDARDDMAARSVAERMLREGANQVWSELGLPPFTIAFRDAKESRA*
Ga0137376_100672681	3300012208	Vadose Zone Soil	MVKSWVVRLELARDDDGSLSSEGIDSLTRLLVKGNMQPVLTRGDSGTILVQVTLDARDEMAARSSAERVLRDGANSVWAALGLPPFTIVFLGAAEGRR*
Ga0137376_110589242	3300012208	Vadose Zone Soil	MVKTWLVRLEVARDDDGPLSDEGIDALTSLLAQGPGKPELTRGDSGTVHVRMTLEARDDMEARSAAERMLREGANAVWLAQGLPPFTITFVDAKEIGR*
Ga0137379_104466071	3300012209	Vadose Zone Soil	MVKSWLVRLELARDDNGSLSDEGIEALAKLLAKGYAKPVLTRGDAGTVLVQLTLEARDDMAAKSAAERTLREGANSVWSALGLPPFTIAF
Ga0137379_105584112	3300012209	Vadose Zone Soil	MVRTWLVRLELARDDDGSLSDEGVDSLTHLLAEDNVQPVITRGDSGTVLVQMTLVARDDMAARSAAERMLREGANQVWSELGLPPFTIAFRDAKESRA*
Ga0137378_100058478	3300012210	Vadose Zone Soil	MVKTWLVRLEVARDDDGAVSDEGIEALARLLAENRVDPVLTRGDRGTILVRMTLDARDDMAARSAAERMLRDGANTVWSALGLPPFTIAFAGATEARS*
Ga0137378_114742902	3300012210	Vadose Zone Soil	CRHYNLLLIVRMCQVRLELARDDDGSLSDQGIDALTKVLGEGHVKPVLTRGDSGTMIVQVTIEARDDSAARTAAERMLRDSANNVWSALGLPPFTIAFLDAKEGPR*
Ga0137377_101812421	3300012211	Vadose Zone Soil	MVRTWLVRLELARDDDGSLSDQGIDALTRVLGEGHVKPVLTRGDSGTMIVQVTIEARDDSAARTAAERMLRDSANNVWSALGLPPFTIAFLDAKEGPR*
Ga0137377_108196932	3300012211	Vadose Zone Soil	LRETVRHPATTIKEPMVKTWQVRLELARDDNGSLSDEGIKALTDLLAERNAKPVVTRGESGTVLVQMTIDARDDMAARSAAEAMLREGANTVWSALGLPPFTIAFVDATKGRP*
Ga0137377_116642611	3300012211	Vadose Zone Soil	QLARDDDGPLSDEGIEALTLLLDTDRVHPVLARGDSGTVLVHMTLDARDDMAARSAAEDALRDGANRVWSALGLPPFTITFLDATLDRR*
Ga0137387_100107186	3300012349	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSDEGIDALTQLLAEGHVKPVLTRGDSGTVLVQMTLDAGDYVAARSAAEHMLRDGANNVWSALGLPPFTIAFVDAMEGHR*
Ga0137372_100261283	3300012350	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSDEGVDSLTHLLAEDNVQPVITRGDSGTVLVQMTLDARDDMAARSVAERMLREGANKVWSELGLPPFTIAFRDAKERRA*
Ga0137372_102408912	3300012350	Vadose Zone Soil	QHYNQVQMVKTWLVRLELARDDDGSLSDEGVDALTHLLAEDQVQPVLTRGDSGTVLVQMTLDARDDMAARSAAERMLREGANRVWSALGLPPFTIAFLDATERRGQT*
Ga0137372_106639871	3300012350	Vadose Zone Soil	MVRAWLVRLELASDDDGSLSDQRIDALTKVLGEGHVKPVLTRGDSGTMIVQVTIEARDDSAARTAAERMLRDSANNVWS
Ga0137372_108337691	3300012350	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSNEGIDALTKLLAKDHVEPLLTRGESGTILVQMTLDARDDMAARSAANQILRDGANAVWSAFGLPPFTITFLDA
Ga0137367_100618463	3300012353	Vadose Zone Soil	MVKAWLVRLELARDDDGSLSDEGIGALTDLLAEDHVKPVLTRGDSGTVLVQLTLDARDEMAARSAAEHMLRDGANTVWSA
Ga0137367_102000092	3300012353	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSDEGVDSLTHLLAEDNVQPVITRGDSGTVLVQMTLDARDDMAARSVAERMLREGANQVWSALGLPPFTIAFRDAKERRA*
Ga0137367_110934111	3300012353	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSDEGVDALTHLLAEDQVQPVLTRGDSGTVLVQMTLDARDDMAARSAAERMLRQGANRVWSALGLPPFTIAFLDATERRGQT*
Ga0137366_101881923	3300012354	Vadose Zone Soil	MVKMWLVRLELARDDDGALSDEGLDALTTLLAEDHVKPALSRGDSGTVLVQMTLNARDDMAARSAAERMLRDGANAVWSARGLPPFTIAFVDVTEVGG*
Ga0137369_1002202210	3300012355	Vadose Zone Soil	MVKAWLVRLELARDDDGSLSDEGIGALTDLLAEDHVKPVLTRGDSGTVLVQLTLDARDEMAARSAAEHMLRDGANTVWSARGLPPFTIAFVDVTEFAGNQ*
Ga0137369_101780181	3300012355	Vadose Zone Soil	MVKTWLVRLEVARDDAGPLSDEGIEALTRLLAEDHAKPVLTRGDSGTVLVQVTVDARTDMAARFAAESMLRNGANTVWSALGLPPFTIAFVDATEGPRQAG*
Ga0137369_102902502	3300012355	Vadose Zone Soil	MVKSWLVRLELARDDDGSLSDEGIDALTQLLAEGHANPLLTRGDSGTVLVQLTLDARDHMAARSAAEHMLREGASNVWSALRLPPFTIAFVDATEDPR*
Ga0137369_104412962	3300012355	Vadose Zone Soil	MVKTWVVRLELARDDDGALSDEGIDALTVLLAEHHTKPVLTRGDSGTVLVQMTLDARDDMAARSAAEAMLRGSANTVWSALGLPPFTISFVDATQGRP*
Ga0137371_104052362	3300012356	Vadose Zone Soil	RLELARDDDGSLSNEGIDALTKLLAKDHVEPLLTRGDSGTILVQMTLDARDDMAARSTANQILRDGANAVWSALGLPPFTITFLDATEGRS*
Ga0137371_112951541	3300012356	Vadose Zone Soil	MDKTWVVRLEVARDDDGAVSDEGVDALTHLLAEDHLEPVLTRGESGTVLVQVTLDARDDMAARSAAERMLRDGANKVWAALGLPPFTIAFRDA
Ga0137375_109739531	3300012360	Vadose Zone Soil	MIKTWLVRLEVARDDDGILTDEAIEALTQLLAERDVKPVLGRGDSGTVHVQMTIEATDQMAARSAAERMLREGANTVWSARGLPPFTIAFVGATEG
Ga0134042_10464182	3300012373	Grasslands Soil	RLELARDDDGSLSDEGIGALTALLAEHHVKSVLNRGHSGTVLVEMTLDARDDRAARSAAEAMLRKDANTVWSALGLPPFTIAFLDATEGPP*
Ga0134047_10432241	3300012380	Grasslands Soil	VHIEEWMTGVRHYNQDEMVKTWLVRLELARDDDGSLSDEGIGALTALLADHHVKSVLNRGHSGTVLVEMTLDARDDRAARSAAEAMLRKDANTVWSALGLPPFTFAFLDATEGPP*
Ga0137373_101284803	3300012532	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSDEGVDALTHLLAEDQVQPVLTRGDSGTVLVQMTLDARDDMAARSAAERMLREGANRVWSALGLPPFTIAFLDATERRGQT*
Ga0137373_101619453	3300012532	Vadose Zone Soil	MVKAWLVRLELARDDDGSLSDEGIGALTDLLAEDHVKPVLTRGDSGTVLVQLTLDARDEMAARSAAEHMLRDGANTVWSARGLPPFTIAFVDVTEV*
Ga0137373_103421001	3300012532	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSNEGIDALTKLLAKDHVEPLLTRGESGTILVQMTLDARDDMAARSAANQILRDGANAVWSAFGLPPFTITFLDATEGRS*
Ga0137373_106386531	3300012532	Vadose Zone Soil	MVKTWVVRLELARDDDGALSDEGVDALTQLLSEKHVKPVLTRGDSGTVLVQMTLDARDDMAARSAAEAMLRGSAYTVWSALGLPPFTISFVDAKQGRP*
Ga0137373_110845522	3300012532	Vadose Zone Soil	ALSDEGIDALTVLLAEHHTKPVLTRGDSGTVLVQMTLDARDDMAARSAAEAMLRGSANTVWSALGLPPFTISFVDATQGRP*
Ga0134077_103017511	3300012972	Grasslands Soil	MVKTWLVRLELARDDDGTLSDEGIKALTDLLAERNAKPVITRGDSGTVLIQMTIDARDDMAARSAAEAMLREGANTVWSALGLPPFTIAFVDATKSRP*
Ga0134075_105622991	3300014154	Grasslands Soil	MVKTWLVRLELARDDDGSLSDEGIDALTDLLAEDHVKPVLTRGDSGTVFVQVTLDARDEMAARSAAEQMLRTGANTVWSVRGLPPFTIAFVDATKSRP*
Ga0075351_11143002	3300014318	Natural And Restored Wetlands	GPVGDEGVDALTHLLAEDDLKPVLTRGEMGTVVVQMTLDAKNDRVARSDAEHVLHDHAVKVWSTLGLPPFSIAFVDAVEATD*
Ga0075353_10346262	3300014321	Natural And Restored Wetlands	MIRTWRVRLELARDDDGPLSDEGVDALTRLLAEDDLKPVLTSGEMGTVVVQMTLDAKNDRVARSDAEHVLHDHAVKVWSTLGLPPFSIAFVDAVEATD*
Ga0134085_106267701	3300015359	Grasslands Soil	MVKTWLVRLELARDDDGSLSNEGIDALTKLLAKDHVEPLLIRGESGTILVQMTLDARDDMAARSAANQILRDGANAVWSALGLPPFTITFLDATEGRS*
Ga0132258_117408332	3300015371	Arabidopsis Rhizosphere	MVKTWLIPLEVARDDDISLSDEGIDALTNLLAEDHVKPVLTRGDSGTVLVQMKLDARDGRAARATAERMLRDGADRVWSALGLPPFTIAFLDATEDRP*
Ga0184610_10425771	3300017997	Groundwater Sediment	APPVHNRWSEVRRSPARARLDQLMVKTWLVRLELARDDDGPLSDEGVGELTVRLTEDLGQPVLTRGDSGTVLVQMTLDATNESAARAAAERMLRDRAQVVWSALGLPPFTITFVDARLETNS
Ga0184623_100171802	3300018056	Groundwater Sediment	MVKTWLVRLELARDDDGPLSDEGVGELTVRLTEDLGQPVLTRGDSGTVLVQMTLDATNESAARAAAEHMLRDRAQVVWSALGLPPFTITFVDARLETNS
Ga0184623_100293932	3300018056	Groundwater Sediment	MVKTWLVRLELARDDDGSLSDEGIDALTRLLAEDRVKPVLTRGDSGTVLVQMTLDARDDMAARSAAERMLRDGANTVWSARGLPPFTIAFVDATELRS
Ga0184619_104352491	3300018061	Groundwater Sediment	MYPRDYNQLRMVKTWLVRLELARDDNGALSDEGVGALTDLLAEEHLKPVLSRGDSGTVLVQVTIDARDEMAARSAAEHTLRDGANTVWSARGLPPFTIAFVDVSEIPR
Ga0184637_106860362	3300018063	Groundwater Sediment	VKTWLVRLELARDDDGPLSDEGVRELTARLTEDLGQPVLTRGDSGTVLVQMTLDATNESAARAAAERMLRDRAQAVWVALGLPPFTITFVDAKPEGAS
Ga0187773_102420882	3300018064	Tropical Peatland	MIKVWRVRLELARDDDGPLSDEGVDALTHLLTEDDLKPVITRGEMGAVVVQMTLDARDDRAARSAAEHVLHDRASRVWSTLGLPPFSITFVDATEGGG
Ga0184618_102432303	3300018071	Groundwater Sediment	SPLMDKPWVVRLEVARDDDGALSDEAIAALTQQLAERHAKPAVTRGDSGTVVVQLAVEARDDRAARSAAEQILRDGANTVWSEFGLPPFTIAFVDATEPSG
Ga0184640_102018323	3300018074	Groundwater Sediment	MVKTWLVRLELARDDDGPLNDEGIDELTDRLTEDLGQPVLTRGDSGTVLVQMTIEAANDVGARAAAERLLRDRAHELWATLSLPPFT
Ga0184640_102376042	3300018074	Groundwater Sediment	MVKTWLVRLELARDDNGPLSDEGVGELTARLTEDLGQPVLTRGDSGTVLVQMTLDATNESAARAAAERMLRDRAQVVWTALGLPPFTITFVDANLASAAP
Ga0184609_101090082	3300018076	Groundwater Sediment	MVKTWMVRLELARDDDGSLSDEGIDALTSLLANDQAKPVLSRGESGTVLVQVTLDAKTDRAARSTAEQILRDGANKVWSALALPPFTIAFLDATEVSRQAE
Ga0184633_106131711	3300018077	Groundwater Sediment	GPLSDEGVGELTARLTEDLGQPVLTRGDSGTVLVQMTLDATNESAARAAAERMLRDRAQAVWVTLGLPPFTIIFVDARLEGAS
Ga0184612_100362273	3300018078	Groundwater Sediment	MVKTWLVRLELARDDDGPLSDEGVGELTVRLTEDLGQPVLTRGDSGTVLVQMTLDATNESAARAAAERMLRDRAQVIWMALGLPPFTITFVDARLETNS
Ga0184627_106044382	3300018079	Groundwater Sediment	MVKTWLVRLELARDDDGPLSDEGVGELTVRLTEDLGQPVLTRGDSGTVLVQMTLDATNESAARAAAERMLRDRAQAVWVALGLPPFTITFVDATLEGAG
Ga0184639_102165392	3300018082	Groundwater Sediment	MVKTWLVRLELARDDDGPLSDEGVRELTARLTEDLGQPVLTRGDSGTVLVQMTLDATNESAARAAAERMLRDRAQVVWMALGLPPFTITFVDATLEGAG
Ga0184639_102270211	3300018082	Groundwater Sediment	MVKKWLVRLELARDDDGPLNDEGIGELTDRLTEDLGQPVLTRGDSGTVLVQMTLDATNESAARAAAESMLRDRAQEVWLALGLPPFTITFVDARPEGAS
Ga0066667_103150592	3300018433	Grasslands Soil	MVKTWQVRLELARDDDGSLSDEGIKALTDLLAERNAKPVVTRGESGTVLVQMMIDARDDMAARSAAEAMLREGATTVWSALGLPPFTIAFVDATKSRP
Ga0066662_106835981	3300018468	Grasslands Soil	MVKTWVVRLALARDDDGSVSDEGIAALTEMLAANQVEPDLTRGDSGTVLVQMTLEARDDMAARSAAEAMLRKGANTVWSALGLPPFTIAFVDATQARR
Ga0066662_110797272	3300018468	Grasslands Soil	MVKTWLVRLELARDDDGSLSQEGVDALAQLLSEGHVKPVLTQGDSGTVLVQMTLDAGDQVAARSAAERMLRGGANTVWAALGLPPFTIAFVEVTEAAR
Ga0066669_116008412	3300018482	Grasslands Soil	AHERRYNQPPMIRRWRVRLHLARDDDGPLSDEGIEALTGLLSQDEAAKPVVTRGDLGTVVVQLTIDARDDTTARSAAERLLREGANKVWSELGLPPFTIVYLDAV
Ga0207684_115355661	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MVKRWVVRLELARDDDGSLSDEGIEALTQLLDKDQVQPVMARGDSGTVLIQMTLDATDDMAARSAAEEALRNGANNVWSALGLPPFTITFLD
Ga0209577_102731991	3300026552	Soil	MVKTWLVRLELARDDDGSLSDKGIEALTQLLDKAQVQPVMARGDSGTVFVQMTVDARDGMAARSAAEEALRDGANKVWSALGLPPFTITFLD
Ga0209592_12772551	3300027731	Freshwater Sediment	MIKTWRVRLELARDDDGPLSDEGVDALTHLLAEDGLKPFVIRGEKGAVVVQMMLDARDDRAVRSVAEHVLHDHASTVWSTLGLPPFTITFVDATEDAS
Ga0209701_103600252	3300027862	Vadose Zone Soil	LPHYNRQQMVKTWLVRLELARDDDGSLSDEGIDALTQLLGEGHVKPVLARGDSGTVLVQMTLDAGDYVAARSAAEHMLRDGANTVWSALRLPPFTIAFVDATEGLR
Ga0209283_101192204	3300027875	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSDEGIDALTQLLGEGHVKPVLARGDSGTVLVQMTLDAGDYVAARSAAEHMLRDGANTVWSALRLPPFTIAFVDATEGLR
Ga0209283_103677852	3300027875	Vadose Zone Soil	MVKTWLVRLELARDDDGSLSDEGIDALTQLLAEGHVKPVLTRGDSGTVLVQMTLDAGDYVAARSAAEHMLRDGANNVWSALGLPPFTIAFVDATEGHR
Ga0209590_102340661	3300027882	Vadose Zone Soil	ELARDDDGSLSDEGIDALTQLLAEGHVKPVLTRGDSGTVLVQMTLDARDDMAARSAAEAVLREGANTVWSALGLPPFTIAFVDATQDRP
Ga0307276_101414461	3300028705	Soil	MDKPWVVRLEVARDDDGALSDEAIAALTQQLAERHAKPAVTRGDSGTVVVQLAVEARDDRAARSAAEQILRDGANTVWSEFGLPPFTIAFVDATEASG
Ga0307312_110887311	3300028828	Soil	MVKTWLVRLELARDDDGSLSDEAITGLTRLLADGHVNPVLTRGDSGTVLILMTLEAGDYMAARSAAERVLRDGANTVWSALGLPPFTIALVDATEGPR
Ga0307278_101377203	3300028878	Soil	MRMVKTWLVRLELARDDDGSLSDEGIVALTDLLAEDHVKPVLTRGDSGTVLVQVTLDARDDMAARSAAERMLRDGANTVWSARGLPPFTIAFTDVAEV
Ga0308155_10013522	3300030987	Soil	MVETWLVRLELARDDDGSLSDEGIVALTDLLAEDHVKPVLTRGDSGTVLVQVTLDARDDMAARSAAERMLRDGANTVWSARGLPPFTIAFTDVAEVRR
Ga0308178_10147013	3300030990	Soil	MVKTWLVRLELARDDDGSLSDEGIVALTDLLAEDHVKPVLTRGDSGTVLVQVTLDARDDMAARSAAERMLRDGANTVWSARGLPPFTIAFTDVAEVRR
Ga0308185_10256392	3300031081	Soil	MVKTWLVRLELARDDNGALSDEGVSALTDLLAEEHLKPVLSRGDSGTVLVQVTIDARDEMAARSAAEHTLRDGANTVWSARGLPPFTIAFVDVSEIPR
Ga0308185_10543681	3300031081	Soil	LVRLELARDDDGSLSDEGIVALTDLLAEDHVKPVLTRGDSGTVLVQVTLDARDDMAARSAAERMLRDGANTVWSARGLPPFTIAFTDVAEVRR
Ga0308194_101181511	3300031421	Soil	DDGSLSDEGIVALTDLLAEDHVKPVLTRGDSGTVLVQVTLDARDDMAARSAAERMLRDGANTVWSARGLPPFTIAFTDVAEVRR
Ga0316622_1006746291	3300033416	Soil	MIKTWRVRLELARDDDGPVSDEGVDALTRLLAEDDLKPVLSRGEMSAVIVQVTLDARDDRLARSAAEHVLNDHASTVWSTLGLPPFSITFVDATEDGG
Ga0370548_068603_327_623	3300034644	Soil	MVKTWLVRLELARDDNGALSDEGVSALTDLLAEEHLKPVLSRGDSGTVLVQVTIDARDDMAARSAAEHTLRDGANTVWSARGLPPFTIAFVDVSEIPR
Ga0370541_003618_874_1221	3300034680	Soil	MMTPEWATNLRYYNSLRMVKTWLVRLELARDDDGLLSDEGVDALTDLLAEEHLKPVLSRGDSGTVLVQVTIDARDEMAARSAAEHTLRDGANTVWSARGLPPFTIAFVDVTEVPR
Ga0370541_003854_862_1158	3300034680	Soil	MVKTWRVRLELARDDNGLLSDEGIDALTDLLAEEHLKPVLSRGDSGTVLVQVTIDARDEMAARSAAEHTLRDGANTVWRARGLPPFTIAFVDVSEVPR
Ga0370546_016441_683_940	3300034681	Soil	DDDGSLSDEGIVALTDLLAEDHVKPVLTRGDSGTVLVQVTLDARDDMAARSAAERMLRDGANTVWSARGLPPFTIAFTDVAEVRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053178

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences