Metagenome / Metatranscriptome Family F053122

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053122
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	99 residues
Representative Sequence	MLQKLDWLRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT
Number of Associated Samples	109
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	15.60 %
% of genes near scaffold ends (potentially truncated)	37.59 %
% of genes from short scaffolds (< 2000 bps)	84.40 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.355 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.929 % of family members)
Environment Ontology (ENVO)	Unclassified (41.844 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (72.340 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.51% β-sheet: 13.83% Coil/Unstructured: 27.66%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF00753	Lactamase_B	9.22
PF00072	Response_reg	8.51
PF01436	NHL	2.84
PF00082	Peptidase_S8	2.84
PF02518	HATPase_c	2.13
PF04229	GrpB	1.42
PF02597	ThiS	1.42
PF01593	Amino_oxidase	0.71
PF08241	Methyltransf_11	0.71
PF00497	SBP_bac_3	0.71
PF07690	MFS_1	0.71
PF00873	ACR_tran	0.71
PF13777	Obsolete Pfam Family	0.71
PF07045	DUF1330	0.71
PF02852	Pyr_redox_dim	0.71
PF00141	peroxidase	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	1.42
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	1.42
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	1.42
COG0376	Catalase (peroxidase I)	Inorganic ion transport and metabolism [P]	0.71
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
All Organisms	root	All Organisms	49.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
cellular organisms	root	All Organisms → cellular organisms	49.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.55 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.35 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.42 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.42 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.71 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.35 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.42 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.35 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.42 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.71 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.35 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.42 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.71 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.35 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.42 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.71 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.35 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.42 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.71 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10170705	All Organisms → cellular organisms → Bacteria → Proteobacteria	1248	Open in IMG/M
3300000559\|F14TC_101645054	Not Available	790	Open in IMG/M
3300000789\|JGI1027J11758_12259963	Not Available	731	Open in IMG/M
3300002076\|JGI24749J21850_1072544	Not Available	534	Open in IMG/M
3300003267\|soilL1_10112236	All Organisms → cellular organisms → Bacteria	5430	Open in IMG/M
3300004114\|Ga0062593_100832241	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300004156\|Ga0062589_102440274	Not Available	540	Open in IMG/M
3300004479\|Ga0062595_102165376	Not Available	543	Open in IMG/M
3300004798\|Ga0058859_11715173	Not Available	513	Open in IMG/M
3300004798\|Ga0058859_11737475	Not Available	524	Open in IMG/M
3300005289\|Ga0065704_10110222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1985	Open in IMG/M
3300005290\|Ga0065712_10364804	Not Available	770	Open in IMG/M
3300005290\|Ga0065712_10666642	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005293\|Ga0065715_10149534	All Organisms → cellular organisms → Bacteria → Acidobacteria	1746	Open in IMG/M
3300005295\|Ga0065707_10007945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	4599	Open in IMG/M
3300005295\|Ga0065707_10465096	Not Available	787	Open in IMG/M
3300005328\|Ga0070676_11305639	Not Available	554	Open in IMG/M
3300005330\|Ga0070690_100279388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1191	Open in IMG/M
3300005332\|Ga0066388_100808592	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300005332\|Ga0066388_102921046	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300005333\|Ga0070677_10795715	Not Available	540	Open in IMG/M
3300005334\|Ga0068869_101372031	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005334\|Ga0068869_102053781	Not Available	513	Open in IMG/M
3300005337\|Ga0070682_100403730	Not Available	1034	Open in IMG/M
3300005340\|Ga0070689_100036325	All Organisms → cellular organisms → Bacteria	3768	Open in IMG/M
3300005344\|Ga0070661_101502730	Not Available	568	Open in IMG/M
3300005355\|Ga0070671_100014033	All Organisms → cellular organisms → Bacteria	6468	Open in IMG/M
3300005355\|Ga0070671_100604554	All Organisms → cellular organisms → Bacteria → Acidobacteria	948	Open in IMG/M
3300005356\|Ga0070674_100262520	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300005364\|Ga0070673_100034025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3852	Open in IMG/M
3300005364\|Ga0070673_100394372	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300005365\|Ga0070688_100029705	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3275	Open in IMG/M
3300005366\|Ga0070659_101618364	Not Available	578	Open in IMG/M
3300005456\|Ga0070678_100632138	Not Available	959	Open in IMG/M
3300005457\|Ga0070662_100040189	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3329	Open in IMG/M
3300005466\|Ga0070685_10945037	Not Available	644	Open in IMG/M
3300005518\|Ga0070699_100047393	All Organisms → cellular organisms → Bacteria	3719	Open in IMG/M
3300005530\|Ga0070679_100927861	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300005544\|Ga0070686_101223633	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005545\|Ga0070695_100232740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1333	Open in IMG/M
3300005545\|Ga0070695_101180864	Not Available	629	Open in IMG/M
3300005548\|Ga0070665_102246330	Not Available	549	Open in IMG/M
3300005564\|Ga0070664_101070457	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300005578\|Ga0068854_101355827	Not Available	642	Open in IMG/M
3300005614\|Ga0068856_102615353	Not Available	511	Open in IMG/M
3300005615\|Ga0070702_100347894	Not Available	1043	Open in IMG/M
3300005617\|Ga0068859_100012702	All Organisms → cellular organisms → Bacteria	8467	Open in IMG/M
3300005618\|Ga0068864_100049442	All Organisms → cellular organisms → Bacteria	3618	Open in IMG/M
3300005618\|Ga0068864_100877943	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300005713\|Ga0066905_101170546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300005713\|Ga0066905_101488965	Not Available	616	Open in IMG/M
3300005719\|Ga0068861_100141137	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300005764\|Ga0066903_104684674	Not Available	728	Open in IMG/M
3300005764\|Ga0066903_106112876	Not Available	630	Open in IMG/M
3300005840\|Ga0068870_10134279	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300005841\|Ga0068863_101211153	Not Available	761	Open in IMG/M
3300005937\|Ga0081455_10136981	Not Available	1906	Open in IMG/M
3300006049\|Ga0075417_10254889	Not Available	842	Open in IMG/M
3300006844\|Ga0075428_100070849	All Organisms → cellular organisms → Bacteria	3811	Open in IMG/M
3300006844\|Ga0075428_102655960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300006852\|Ga0075433_10320542	All Organisms → cellular organisms → Bacteria → Acidobacteria	1371	Open in IMG/M
3300006871\|Ga0075434_100355568	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300006881\|Ga0068865_100615098	Not Available	920	Open in IMG/M
3300006969\|Ga0075419_10102699	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300009094\|Ga0111539_11972676	Not Available	677	Open in IMG/M
3300009094\|Ga0111539_13447342	Not Available	508	Open in IMG/M
3300009100\|Ga0075418_11671627	Not Available	692	Open in IMG/M
3300009147\|Ga0114129_10218113	All Organisms → cellular organisms → Bacteria	2575	Open in IMG/M
3300009147\|Ga0114129_11491210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300009156\|Ga0111538_10668509	Not Available	1316	Open in IMG/M
3300009162\|Ga0075423_11871893	Not Available	648	Open in IMG/M
3300009176\|Ga0105242_12764172	Not Available	541	Open in IMG/M
3300009177\|Ga0105248_11188925	Not Available	862	Open in IMG/M
3300010043\|Ga0126380_10947546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	720	Open in IMG/M
3300010043\|Ga0126380_11306833	Not Available	632	Open in IMG/M
3300010047\|Ga0126382_10122119	Not Available	1730	Open in IMG/M
3300010047\|Ga0126382_11773532	Not Available	579	Open in IMG/M
3300010359\|Ga0126376_11991014	Not Available	622	Open in IMG/M
3300010360\|Ga0126372_10633890	Not Available	1032	Open in IMG/M
3300010360\|Ga0126372_11759336	Not Available	662	Open in IMG/M
3300010362\|Ga0126377_10003043	All Organisms → cellular organisms → Bacteria → Acidobacteria	11750	Open in IMG/M
3300010362\|Ga0126377_10572557	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300010362\|Ga0126377_12907271	Not Available	553	Open in IMG/M
3300010397\|Ga0134124_12378197	Not Available	571	Open in IMG/M
3300010399\|Ga0134127_10199964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1858	Open in IMG/M
3300011119\|Ga0105246_10269443	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300011119\|Ga0105246_11238123	Not Available	689	Open in IMG/M
3300012487\|Ga0157321_1010378	Not Available	709	Open in IMG/M
3300012948\|Ga0126375_10622360	Not Available	828	Open in IMG/M
3300012948\|Ga0126375_10842586	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300012957\|Ga0164303_10128697	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300012960\|Ga0164301_10445689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300012960\|Ga0164301_11923248	Not Available	501	Open in IMG/M
3300012961\|Ga0164302_10156060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1351	Open in IMG/M
3300012985\|Ga0164308_12051164	Not Available	533	Open in IMG/M
3300013297\|Ga0157378_10334981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1474	Open in IMG/M
3300013297\|Ga0157378_11589834	Not Available	699	Open in IMG/M
3300015371\|Ga0132258_10006300	All Organisms → cellular organisms → Bacteria	23561	Open in IMG/M
3300015371\|Ga0132258_10257445	All Organisms → cellular organisms → Bacteria → Acidobacteria	4270	Open in IMG/M
3300015373\|Ga0132257_100089263	All Organisms → cellular organisms → Bacteria	3527	Open in IMG/M
3300015373\|Ga0132257_101529163	All Organisms → cellular organisms → Bacteria → Acidobacteria	852	Open in IMG/M
3300015373\|Ga0132257_101912641	Not Available	764	Open in IMG/M
3300015374\|Ga0132255_100232106	All Organisms → cellular organisms → Bacteria	2628	Open in IMG/M
3300015374\|Ga0132255_102951086	Not Available	726	Open in IMG/M
3300018476\|Ga0190274_11197057	Not Available	843	Open in IMG/M
3300019362\|Ga0173479_10694037	Not Available	548	Open in IMG/M
3300020078\|Ga0206352_10981042	Not Available	639	Open in IMG/M
3300020610\|Ga0154015_1052143	Not Available	521	Open in IMG/M
3300021445\|Ga0182009_10047103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1807	Open in IMG/M
3300025893\|Ga0207682_10196071	Not Available	927	Open in IMG/M
3300025901\|Ga0207688_10553811	Not Available	723	Open in IMG/M
3300025908\|Ga0207643_10002301	All Organisms → cellular organisms → Bacteria	10385	Open in IMG/M
3300025908\|Ga0207643_10125823	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1521	Open in IMG/M
3300025916\|Ga0207663_11433647	Not Available	556	Open in IMG/M
3300025919\|Ga0207657_10901302	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	681	Open in IMG/M
3300025920\|Ga0207649_11212729	Not Available	596	Open in IMG/M
3300025931\|Ga0207644_10226528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1484	Open in IMG/M
3300025931\|Ga0207644_10356786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1188	Open in IMG/M
3300025932\|Ga0207690_10245495	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300025932\|Ga0207690_11228178	Not Available	626	Open in IMG/M
3300025936\|Ga0207670_10138399	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300025940\|Ga0207691_10573310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300025942\|Ga0207689_11007491	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300025945\|Ga0207679_11556415	Not Available	606	Open in IMG/M
3300025960\|Ga0207651_10013516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4675	Open in IMG/M
3300025960\|Ga0207651_10633704	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300025981\|Ga0207640_11533433	Not Available	599	Open in IMG/M
3300026041\|Ga0207639_10525565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1084	Open in IMG/M
3300026075\|Ga0207708_10064486	All Organisms → cellular organisms → Bacteria	2799	Open in IMG/M
3300026088\|Ga0207641_10059989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3241	Open in IMG/M
3300026088\|Ga0207641_11890918	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300026118\|Ga0207675_100004780	All Organisms → cellular organisms → Bacteria	13050	Open in IMG/M
3300026121\|Ga0207683_10331528	Not Available	1395	Open in IMG/M
3300026142\|Ga0207698_12664869	Not Available	509	Open in IMG/M
3300027873\|Ga0209814_10204209	Not Available	854	Open in IMG/M
3300031716\|Ga0310813_11242034	Not Available	687	Open in IMG/M
3300031720\|Ga0307469_11590595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300031892\|Ga0310893_10495287	Not Available	548	Open in IMG/M
3300031908\|Ga0310900_11166900	Not Available	639	Open in IMG/M
3300032205\|Ga0307472_102240495	Not Available	552	Open in IMG/M
3300032211\|Ga0310896_10822693	Not Available	533	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	58.16%
Environmental	Environmental	41.84%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.74%
Terrestrial	Environmental → Terrestrial	41.84%
Human	Host-Associated → Human	1.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	26.24%
Digestive System	Host-Associated → Human → Digestive System	1.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.24%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.02%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.31%
Loam	Environmental → Terrestrial → Soil → Loam	15.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.80%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.42%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.42%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.42%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.71%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.51%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.26%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.13%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.42%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.42%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012487	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_101707052	3300000550	Soil	MTWRRSFDNSSDVGVRERKSRSFPMQQKFDWLRRFLHLPEPRIEHLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYGPEDIVASHLFRGRHADEQLAEKADVGRLTLIATGFREIAK*
F14TC_1016450541	3300000559	Soil	MQQKFDWFRRFLHLPEPRIEHLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYGPEDIVASHLFRGRHADEQLAEKADVGRLTLIATGFREIAK
JGI1027J11758_122599632	3300000789	Soil	MQQKFDWLRRFFHPHQSRIERLATFWTVRGPSNRDLTCSSYRVQTGLELRVEYGPEDIVASHLFRGRDAGEQLAEKADAGRLTLIARGFREIAK*
JGI24749J21850_10725441	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	MLQKLDWLKRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGF
soilL1_101122362	3300003267	Sugarcane Root And Bulk Soil	MQHKFDWLRRFLYPRDPRIEHLATFWTVRGPSNRDLTCSAYRLRSGLELRVEYSPEDIVASQLFRGRGADEQLAEKAYAGRLTLIATGFREIAK*
Ga0062593_1008322412	3300004114	Soil	MQQKLDWLRRFLHSPEPRIEHLATYWKVRGPSNRDLTCSAYKVQTGLELRVEYGPEDIVASQLFQGRDAEQLAEKADVGRLTLIAKGFREIHP*
Ga0062589_1024402741	3300004156	Soil	MAALLIIRETDEGANERSRSFPMLQKLDWLRRFLHLSDPRIEHLATLWTVRGPSNRDLTCCAYRVQAGLELRIEYGPEDIVASQLFRGRDADERLCEKADVGLMTLVATGFREIAT*
Ga0062595_1021653761	3300004479	Soil	MQQKFDWLRRLLHLHEPRIERLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADELAEKADAGRLTLIATGFREI
Ga0058859_117151731	3300004798	Host-Associated	MLQKLDWLKRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREIAT*
Ga0058859_117374751	3300004798	Host-Associated	RFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0065704_101102224	3300005289	Switchgrass Rhizosphere	MQQKFDWLRRFLHPREPRIEHLATLWTVRGPSNRDLTCSAYRVQTGLELRVEYGPEDIVASHPFPGGDADVQLAETADAGRLTLIARGFREIAE*
Ga0065712_103648042	3300005290	Miscanthus Rhizosphere	MLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0065712_106666422	3300005290	Miscanthus Rhizosphere	QKLDWLRRFLHSPEPRIEHLATYWKVRGPSNRDLTCSAYKVQTGLELRVEYGPEDIVASQLFQGRDAEQLAEKADVGRLTLIAKGFREIHP*
Ga0065715_101495341	3300005293	Miscanthus Rhizosphere	MQKFDWLRRLLYPREPRIEHLATFWTVRGPSNRDLTCSAYRLRTGLELRVEYSPEDIVASQLFRGRDADEQLAEKADAGRLTLIATGFREIAK
Ga0065707_100079454	3300005295	Switchgrass Rhizosphere	MQQKFDWLRRFLHPREPRIEHLATLWTVRGPSNRDLTCSAYRVQTGLELRVEYGPEDIVASHXFPGGXADXQLAETADAGRLTLIAXGFREIAE*
Ga0065707_104650961	3300005295	Switchgrass Rhizosphere	MLQKLDWLRRFLHLSEARIEHLGTLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPDDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0070676_113056391	3300005328	Miscanthus Rhizosphere	SEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREIAT*
Ga0070690_1002793882	3300005330	Switchgrass Rhizosphere	MKRHGIATLLIIRETYEGANEKSRSFPMLQKLHWLRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0066388_1008085922	3300005332	Tropical Forest Soil	MQQKFDWLRRFLHLSEPRIEHLTTFWTVRGPSNRNLTCSAYRVQTGLELRVEYGPEDIVASHRFRGRHADEQLAEKADAGRLTLIARGFREIAT*
Ga0066388_1029210461	3300005332	Tropical Forest Soil	MLQKLHWLRRFLRLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRHADERLCEKADVGRLTLIATGFREIAT*
Ga0070677_107957151	3300005333	Miscanthus Rhizosphere	MLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0068869_1013720311	3300005334	Miscanthus Rhizosphere	RIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0068869_1020537811	3300005334	Miscanthus Rhizosphere	MQKFDWLRRLLYPREPRIEHLATFWTVRGPSNRDLTCSAYRLRTGLELRVEYSPEDIVASQLFRGRDADEQLAEKADAGRLTLIATGFREIAK*
Ga0070682_1004037301	3300005337	Corn Rhizosphere	MLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRNADERLCEKADVGRLTLIAT
Ga0070689_1000363255	3300005340	Switchgrass Rhizosphere	MKRHGIATLLIIRETYEGANEKSRSFPMLQKLHWLRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRNADERLCEKADVGRLTLIATGFREIAT*
Ga0070661_1015027301	3300005344	Corn Rhizosphere	MLQKLDWLKRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0070671_1000140338	3300005355	Switchgrass Rhizosphere	MPWGAALLRIVTRMSARTKIASFPMQQKFDWLRRLLHLHEPRIERLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADELAEKADAGRLTLIATGFREIAT*
Ga0070671_1006045541	3300005355	Switchgrass Rhizosphere	MPQKFDWLRRLLHPHEPRIEHLATFWTVRGPSNRDLTCSSYRVQTGLELRVEYSPQDIVASHLFRGRDADEQLAEKADAGRLTLIATGFREIANYAAAQQQQTAVGAGG*
Ga0070674_1002625202	3300005356	Miscanthus Rhizosphere	MLQKLDWLKRFLHLSEPRIEHLATLWTVRGPSNRDLTCSSYRVQTGLELRVEYGPEDIVASQLFQGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0070673_1000340253	3300005364	Switchgrass Rhizosphere	MQKFDWLRRLLYPREPRIEHLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADERVAQKADAGRLTLIATGFREIAT*
Ga0070673_1003943721	3300005364	Switchgrass Rhizosphere	LSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRNADERLCEKADVGRLTLIATGFREIAT*
Ga0070688_1000297051	3300005365	Switchgrass Rhizosphere	LHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREIAT*
Ga0070659_1016183642	3300005366	Corn Rhizosphere	MQQKLDWLRRFLHSPEPRIEHLATYWKVRGPSNRDLTCSAYKVQTGLELRVEYGPEDIVASQLFQGRDAEQLAEKADV
Ga0070678_1006321381	3300005456	Miscanthus Rhizosphere	MKRHGIATLLIIRETYEGANEKSRSFPMLQKLHWLRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIA
Ga0070662_1000401895	3300005457	Corn Rhizosphere	MLQKLDWLRRFLHLSEARIEHLGTLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREIAT*
Ga0070685_109450371	3300005466	Switchgrass Rhizosphere	MQHKFDWLRRLLHSHEPRIEHLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREIAT*
Ga0070699_1000473937	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LIIRETYEGANEKSRSFPMLQKLHWLRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREIAT*
Ga0070679_1009278611	3300005530	Corn Rhizosphere	IRETYEGANEKSRSFPMLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0070686_1012236332	3300005544	Switchgrass Rhizosphere	SEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRNADERLCEKADVGRLTLIATGFREIAT*
Ga0070695_1002327402	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MQQKFDWLRRLLHLHEPRIERLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADELAEKADAGRLTLIATGFREIAT*
Ga0070695_1011808641	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MLQKLDWLRRFLHLSEARIEHLGTLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREIAT
Ga0070665_1022463302	3300005548	Switchgrass Rhizosphere	VGCRVTKRQDIATLLIIRETYEGANEKSRSFPMLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0070664_1010704571	3300005564	Corn Rhizosphere	ISVCLAGLTVGCRVMKGHGIATLLIIRETYEGANEKSRSFPMLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0068854_1013558272	3300005578	Corn Rhizosphere	CLAGLTVRCRVTKRRDIATLLIIRETYEGANEKSRSFPMLKLDWLKRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREIAT*
Ga0068856_1026153531	3300005614	Corn Rhizosphere	MPQKFDWLRRLLHLHEPRIERLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADELAEKADAGRLTLIATGFREIAT*
Ga0070702_1003478942	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVG
Ga0068859_1000127023	3300005617	Switchgrass Rhizosphere	LVGVTVGCRVTKRQDIATLLIIRETYEGANEKSRSFPMLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0068864_1000494424	3300005618	Switchgrass Rhizosphere	MQHKFDWLRRLLHSHEPRIEHLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADERVAQKADAGRLTLIATGFREIAT*
Ga0068864_1008779431	3300005618	Switchgrass Rhizosphere	RFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREIAT*
Ga0066905_1011705462	3300005713	Tropical Forest Soil	MKQKFDWLRRLLHPHEPRIEHLATFWTVRGPSNRDLTCSAYRVQTGFELRVEYSPQDIVASQLIRGRDADEQLAEKADAGRLTLIATGFREIAR*
Ga0066905_1014889651	3300005713	Tropical Forest Soil	MLQKLDWLRRFLHLSEPRIEHLATLWTVRGPSNRDLTCRAYRVQTGLELRIEYGPEDIVASQLFRGRHADERLCEKADVGRLTLIATGFREIAT*
Ga0068861_1001411372	3300005719	Switchgrass Rhizosphere	MLQKLDWLKRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGD*
Ga0066903_1046846742	3300005764	Tropical Forest Soil	MALLITRETQEGANERSRSFPMMQKLHWLRRFLHFSDRRIEHLATLWTMRGPSNRDLTCCAYKVQTGLELRVEYGPEDIIASQLFRGHDADERLCEKADVGRLTLIATGFREIAT*
Ga0066903_1061128762	3300005764	Tropical Forest Soil	MLHKLDWLRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRHADERLCEKADVGRLTLIATGFREIAT*
Ga0068870_101342792	3300005840	Miscanthus Rhizosphere	MLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRNADERLCEKADVGRLTLIATGFREIAT*
Ga0068863_1012111531	3300005841	Switchgrass Rhizosphere	MKRHGIATLLIIRETYEGANEKSRSFPMLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT
Ga0081455_101369812	3300005937	Tabebuia Heterophylla Rhizosphere	MLQKLDWLRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRDADERLCEKADAGRLTLIATGFREIAT*
Ga0075417_102548892	3300006049	Populus Rhizosphere	MQQKFDWLRRFLHLSKPRIEHLATFWTVRGPSNRNLTCSAYRVQTGLELRVEYGPEDIVASHRFRGRHADEQLAEKADAGRLTLIARGFREIAT*
Ga0075428_1000708494	3300006844	Populus Rhizosphere	MQQKLDWLRRFLHLSKPRIEHLATFWTVRGPSNRNLTCSAYRVQTGLELRVEYGPEDIVASHRFRGRHADEQLAEKADAGRLTLIARGFREIAT*
Ga0075428_1026559601	3300006844	Populus Rhizosphere	SFPMQQKFDWLTRFLHPREPRIEHLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYGPEDIVASHLFRGRVADEQLAEKADAGRLTLIERGFREIAK*
Ga0075433_103205422	3300006852	Populus Rhizosphere	MQKFDWLRRLLYPREPRIEHLATFWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREIAT*
Ga0075434_1003555682	3300006871	Populus Rhizosphere	MPWGAALLRIVTRMSARAKIASFPMQQKFDWLRRLLHLHEPRIERLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADELAEKADAGRLTLIATGFREIAT*
Ga0068865_1006150981	3300006881	Miscanthus Rhizosphere	MLQKLDWLRRFLHLSEARIEHLGTLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRNADERLCEKADVGRLTLIATGFREIAT*
Ga0075419_101026991	3300006969	Populus Rhizosphere	MAALLIIREGANERSRSFPMLQKLDWLKRFLHLSDPRIEHLATLWTVRGPTNRDLTCCAYKVQTGLELRIEYGPEDIVASQLFRGRNADERLCEKADAGRLTLIATGFREIAT*
Ga0111539_119726761	3300009094	Populus Rhizosphere	MLQTLDWFRRFLHLPEPRIEHLATLWTVRGPSNRDLTCCAYKVQTGLELRVEYGPEDIVASQLFQGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0111539_134473422	3300009094	Populus Rhizosphere	FLHPREPRIEHLATLWTVRGPSNRDLTCSAYRVQTGLELRVEYGPEDIVASHRFRGRHADEQLAEKADAGRLTLIARGFREIAT*
Ga0075418_116716271	3300009100	Populus Rhizosphere	RIEHLATLWTVRGPTNRDLTCCAYKVQTGLELRIEYGPEDIVASQLFRGRNADERLCEKADAGRLTLIATGFREIAT*
Ga0114129_102181132	3300009147	Populus Rhizosphere	MGVRERKSRSFPMQQKFDWLRRFLHLSKPRIEHLATFWTVRGPSNRNLTCSAYRVQTGLELRVEYGPEDIVASHRFRGRHADEQLAEKADAGRLTLIARGFREIAT*
Ga0114129_114912101	3300009147	Populus Rhizosphere	MQQKFDWLTRFLHPREPRIEHLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYGPEDIVASHLFRGRVADEQLAEKADAGRLTLIERGFREIAK*
Ga0111538_106685092	3300009156	Populus Rhizosphere	MLQKLDWLKRFLHLSDPRIEHLATLWTVRGPTNRDLTCCAYKVQTGLELRIEYGPEDIVASQLFRGRNADERLCEKADAGRLTLIATGFREIAT*
Ga0075423_118718931	3300009162	Populus Rhizosphere	MQQKFDWLRRLLHLHEPRIECLATFWTVRGPSNRDLTCSAYRLRTGLELRVEYSPEDIVASQLFRGRDADEQLAEKADAGRLTLIATGFREIAK*
Ga0105242_127641721	3300009176	Miscanthus Rhizosphere	MLQKLDWLKRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRDADERLCEKADV
Ga0105248_111889252	3300009177	Switchgrass Rhizosphere	MQHKFDWLRRLLHFHEPRIEHLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADERVAQKADAGRLTLIATGFREIAT*
Ga0126380_109475461	3300010043	Tropical Forest Soil	MGVRERKSRSFPMQQKFDWLRRFLHLPEPRIEHLATFWTVRGPSNRNLTCSAYRVQTGLELRVEYGPEDIVASHRFRGRHADEQLAEKADAGRLTLIARGFREIAT*
Ga0126380_113068332	3300010043	Tropical Forest Soil	MAALLIIHETQEGANERSRSFPMLQKLDWLRRFLHLSKPRIEHLGTLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPDDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0126382_101221193	3300010047	Tropical Forest Soil	MAALLIIHETQEGANEKSRSFPMLQKLDWLRRFLHLSKPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPDDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0126382_117735322	3300010047	Tropical Forest Soil	MQQKFDWLRRFLHLSEPRIEHLTTFWTVRGPSNRNLTCSAYRVRTGLELRVEYGPEDIVASHRFRGRHADEQLAEKADAGRLTLIARGFREIAT*
Ga0126376_119910141	3300010359	Tropical Forest Soil	MLQKLDWLRRFLHLSDRRIEHLATLWTMRGPSNRDLTCCAYKVQTGLELRVEYGPEDIIASQLFRGHDADERLCEKADVGRLT
Ga0126372_106338902	3300010360	Tropical Forest Soil	MQQKFDWLRRLLHFHKPRIEHLATFWTVRGPSNRDLTCSAYRVQTGFELRVEYGPEDIVASQLFRGRDVDALLAEKADAGRLTLISRGFREIAK*
Ga0126372_117593361	3300010360	Tropical Forest Soil	MKQKFDWLRRLLHPHEPRIEHLATFWTVRGPSNRDLTCSAYRVRTGLELRIEYSPEDIVASHLFRGRDADELAEKADAGRLTLIATGFREIANSRSGQLPQTAAGAAG
Ga0126377_1000304314	3300010362	Tropical Forest Soil	MLQKLDWLRRFLHLSKPRIEHLGTLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPDDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0126377_105725572	3300010362	Tropical Forest Soil	MQQKFDWLRRLLHPHEPRIEHLGTFWTVRGPSNRDLTCSAYRVQTGFELRVEYSPQDIVASQLIRGRDADEQLAEKADAGRLTLIARGFREIHQTNLS*
Ga0126377_129072712	3300010362	Tropical Forest Soil	DWLGPRAVNREPRIEHVATFWTLRGASGRDITCSAYLTETGLELRTEYGPDAIIASQLLRGPGADECAAETADAWRLTLIAKGFQEIDG*
Ga0134124_123781971	3300010397	Terrestrial Soil	MQQKFDWLRRLLHRHEPRIERLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASQLFRGRDADEQLAEKADAGRLTLIATGFREIAK
Ga0134127_101999644	3300010399	Terrestrial Soil	MQQKFDWLRRFLHLREPRIEHLATFWTVRGPSNRDLTCSAYRLQTGLELRVEYGPEDIVASHVFRGRHADEQLAEKADAGRLTLIATGFREIAK*
Ga0105246_102694432	3300011119	Miscanthus Rhizosphere	MQQKLDWLRRFLHSPEPRIEHLATYWKVRGPSNRDLTCSAYKVQTGLELRVEYGPEDIVASQLFQGRDAEQLAEKADVGR
Ga0105246_112381231	3300011119	Miscanthus Rhizosphere	LVGVTVGCRVTKRQDIATLLIIRETYEGANEKSRSFPMLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREIAT*
Ga0157321_10103781	3300012487	Arabidopsis Rhizosphere	MKRHGIATLLIIRETYEGANEKSRSFPMLQKLHWLRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0126375_106223602	3300012948	Tropical Forest Soil	LGCRVTKRYDIAALSIIRKTHEGANEKSRSFAMLQKLDWLKRFFHLPEPRIEHLATLWTVRGPSNRDLTCCAYRVQAGIELRIEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0126375_108425861	3300012948	Tropical Forest Soil	LTVGCRVTKRHDMAARLIIHETQEGANERSRSFPMLQKLDWLRRFLHLSEPRREHLGKLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRHADERLCKKADVGRLTLLATGFREIAT*
Ga0164303_101286973	3300012957	Soil	MQQKFDWLRRLLHLHEPRIERLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADELAEKADAGRLTLIA
Ga0164301_104456892	3300012960	Soil	DWLRRLLHLHEPRIERLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADELAEKADAGRLTLIATGFREIAT*
Ga0164301_119232481	3300012960	Soil	MKRHGIATLLIIRETYEGANEKSRSFPMLQKLNWLRRLLHFSEPRIERLATLWTMRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASRLFRGRHANERLCEKADVGRLTLMATGFREIAT*
Ga0164302_101560602	3300012961	Soil	MQQKFDWLRRLLHFHEPRIERLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADELAEKADAGRLTLIATGFREIAT*
Ga0164308_120511642	3300012985	Soil	MQQKFDWLRRLLHLHEPRIERLATFWTVRGPSNRDLTCSAYRVQTGLELRIEYGPEDIVASQLFRGRNADERLCEKADVGRLTLIATGFREIAT*
Ga0157378_103349813	3300013297	Miscanthus Rhizosphere	MQQKFDWLRRLLHLHEPRIERLATFWTVRGPSNRDLTCSSYRVQTGLELRVEYSPQDIVASHLFRGRDADEQLAEKADAGRLTLIATGFREIANYAAAQQQQTAVGAGG*
Ga0157378_115898341	3300013297	Miscanthus Rhizosphere	VGVTVGCRVTKRQDIATLLIIRETYEGANEKSRSFPMLKLDWLKRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRNADERLCEKADVGRLTLIATGFREIAT*
Ga0132258_100063007	3300015371	Arabidopsis Rhizosphere	MNARTKSRFFPMPQKFDWLRRLLHPHEPRIEHLATFWTVRGPSNRDLTCSSYRVQTGLELRVEYSPQDIVASHLFRGRDADEQLAEKADAGRLTLIATGFREIANYAAAQQQQTAAGAGG
Ga0132258_102574451	3300015371	Arabidopsis Rhizosphere	MLQKLNWLRRLLHFSEPRIERLATLWTMRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASRLFRGRHANERLCEKADVGRLTLMATGFREIAT*
Ga0132257_1000892633	3300015373	Arabidopsis Rhizosphere	MERHDMAALLIIHETQEGANERSRSFPMLQKLDWLRRFLHLSEARIEHLGTLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPDDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0132257_1015291632	3300015373	Arabidopsis Rhizosphere	KFDWLRRLLHPHEPRIEHLATFWTVRGPSNRDLTCSSYRVQTGLELRVEYSPQDIVASHLFRGRDADEQLAEKADAGRLTLIATGFREIANYAAAQQQQTAAGAGG*
Ga0132257_1019126411	3300015373	Arabidopsis Rhizosphere	MKQKFDWLRRFLNPREPRLEHLATFWTVRGPSNRDLTCSAYRVQTGLELRVQYGPEDIVASQRFGGRDAEQLAEQADAGRLTLIATGFREIAE*
Ga0132255_1002321061	3300015374	Arabidopsis Rhizosphere	MLQKLDWLRRFLHLSEARIEHLGTLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPDDIVASQLFRGRDADERLCEKADVGRLTLIA
Ga0132255_1029510861	3300015374	Arabidopsis Rhizosphere	MLQTLDWFRRFLHLPEPRIEHLATLWTVRGPSNRDLTCCAYKVQTGLELRVEYEPEDIVASQLFQGRDADERLCEKADVGRLTLIATGFREIAT*
Ga0190274_111970571	3300018476	Soil	MTFGLGPPQQSRDPQSEHVATFRTLRGPSERDRTGSAYRVETGPELRVEYSAEEIVASELFRGVDADERLAEKADVGRRTLAAQGFREIARVSG
Ga0173479_106940371	3300019362	Soil	MQQKLDWLRRFLHSPEPRIEHLATYWKVRGPSNRDLTCSAYKVQTGLELRVEYGPEDIVASHLFRGRDADELAEKADAGRLTLIATGFREIAT
Ga0206352_109810421	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	RVTKRQDIATLLIIRETYEGANEKSRSFPMLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT
Ga0154015_10521431	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	MLQKLDWLKRFLHLAEPQIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT
Ga0182009_100471032	3300021445	Soil	MQHKFDWLRRLLHSHEPRIEHLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADERVAQKADAGRLTLIATGFREIAT
Ga0207682_101960711	3300025893	Miscanthus Rhizosphere	MLQKLDWLRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT
Ga0207688_105538111	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MQQKLDWLRRFLHSPEPRIEHLATYWKVRGPSNRDLTCSAYKVQTGLELRVEYGPEDIVASQLFQGRDAEQLAEKADVGRLTLIAKGFREIHP
Ga0207643_100023016	3300025908	Miscanthus Rhizosphere	MLQKLDWLKRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREIAT
Ga0207643_101258234	3300025908	Miscanthus Rhizosphere	LVGVTVGCRVTKRQDIATLLIIRETYEGANEKSRSFPMLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT
Ga0207663_114336471	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	HFSEPRIERLATLWTMRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASRLFRGRHANERLCEKADVGRLTLMATGFREIAT
Ga0207657_109013022	3300025919	Corn Rhizosphere	MQQKLDWLRRFLHSPEPRIEHLATYWKVRGPSNRDLTCSAYKVQTGLELRVEYGPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREVAT
Ga0207649_112127292	3300025920	Corn Rhizosphere	MLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT
Ga0207644_102265283	3300025931	Switchgrass Rhizosphere	MPQKFDWLRRLLHPHEPRIEHLATFWTVRGPSNRDLTCSSYRVQTGLELRVEYSPQDIVASHLFRGRDADEQLAEKADAGRLTLIATGFREIANYAAAQQQQTAVGAGG
Ga0207644_103567861	3300025931	Switchgrass Rhizosphere	LLRIVTRMSARTKIASFPMQQKFDWLRRLLHLHEPRIERLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADELAEKADAGRLTLIATGFREIAT
Ga0207690_102454953	3300025932	Corn Rhizosphere	LVGVTVGCRVTKRQDIATLLIIRETYEGANEKSRSFPMLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT
Ga0207690_112281782	3300025932	Corn Rhizosphere	MQQKLDWLRRFLHSPEPRIEHLATYWKVRGPSNRDLTCSAYKVQTGLELRVEYGPEDIVASQLFQGRDAEQLAEKADVGRLTLIAKGF
Ga0207670_101383992	3300025936	Switchgrass Rhizosphere	MKRHGIATLLIIRETYEGANEKSRSFPMLQKLHWLRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRNADERLCEKADVGRLTLIATGFREIA
Ga0207691_105733102	3300025940	Miscanthus Rhizosphere	RRLLHLHEPRIERLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADELAEKADAGRLTLIATGFREIAT
Ga0207689_110074913	3300025942	Miscanthus Rhizosphere	RIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT
Ga0207679_115564152	3300025945	Corn Rhizosphere	DRPGISVCLVGVTVGCRVTKRQDIATLLIIRETYEGANEKSLSLPMLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT
Ga0207651_100135164	3300025960	Switchgrass Rhizosphere	PRIEHLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADERVAQKADAGRLTLIATGFREIAT
Ga0207651_106337041	3300025960	Switchgrass Rhizosphere	SRSFPMLQKLHWLRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYGPEDIVASQLFRGRNADERLCEKADVGRLTLIATGFREIAT
Ga0207640_115334331	3300025981	Corn Rhizosphere	IRETYEGANEKSRSFPMLKLDWLKRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREIAT
Ga0207639_105255652	3300026041	Corn Rhizosphere	VGVTVGCRVTKRQDIATLLIIRETYEGANEKSRSFPMLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT
Ga0207708_100644861	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MLQKLDWLRRFLHLSEARIEHLGTLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPDDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT
Ga0207641_100599893	3300026088	Switchgrass Rhizosphere	KFDWLRRLLHLHEPRIERLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYSPEDIVASHLFRGRDADELAEKADAGRLTLIATGFREIAT
Ga0207641_118909181	3300026088	Switchgrass Rhizosphere	IRETYEGANEKSRSFPMLKLDWLRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT
Ga0207675_1000047806	3300026118	Switchgrass Rhizosphere	MLQKLDWLKRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGD
Ga0207683_103315283	3300026121	Miscanthus Rhizosphere	MKRHGIATLLIIRETYEGANEKSRSFPMLQKLHWLRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPEDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIA
Ga0207698_126648691	3300026142	Corn Rhizosphere	TKRQDIATLLIIRETYEGANEKSRSFPMLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVGRLTLIATGFREIAT
Ga0209814_102042091	3300027873	Populus Rhizosphere	MQQKFDWLRRFLHLSKPRIEHLATFWTVRGPSNRNLTCSAYRVQTGLELRVEYGPEDIVASHRFRGRHADEQLAEKADAGRLTLIARGFREIAT
Ga0310813_112420341	3300031716	Soil	MLKLDWFRRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRVEYGPDDIVASQLFLGRDADERLCEKADVGRLTLIATGFREIAT
Ga0307469_115905952	3300031720	Hardwood Forest Soil	MQQKFDWLTRFLHPREPRIEHLATFWTVRGPSNRDLTCSAYRVQTGLELRVEYGPEDIVASHRFRGRVADEQLAEKADAGRLTLIERGFREIAK
Ga0310893_104952871	3300031892	Soil	MLQKLDWLRRFLHLSEARIEHLGTLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPDDIVASQLFRGRDADERLCEKADVGRLTLIATGFRE
Ga0310900_111669002	3300031908	Soil	MLQKLDWLKRFLHLSEPRIEHLATLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPEDIVASQLFRGRHADERLCQKADVG
Ga0307472_1022404951	3300032205	Hardwood Forest Soil	MQQKFDWLRRFLHLSEPRIEHLATFWTVRGPSNRNLTCSAYRVQTGLELRVEYGPEDIVASHRFRGRHADEQLAEKADAGRLTLIARGFREIAT
Ga0310896_108226931	3300032211	Soil	VRFPMLQKLDWLRRFLHLSEARIEHLGTLWTVRGPSNRDLTCCAYRVQTGLELRIEYSPDDIVASQLFRGRDADERLCEKADVGRLTLIATGFREIAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053122

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences