Metagenome / Metatranscriptome Family F052835

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052835
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	44 residues
Representative Sequence	METVAVGIPQRKPAHETPTEHAINVVFSLLLLATVIGLWIYFR
Number of Associated Samples	111
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.71 %
% of genes near scaffold ends (potentially truncated)	94.37 %
% of genes from short scaffolds (< 2000 bps)	88.73 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.958 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.056 % of family members)
Environment Ontology (ENVO)	Unclassified (30.282 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.296 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.21% β-sheet: 0.00% Coil/Unstructured: 64.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF16338	AGL_N	16.20
PF03073	TspO_MBR	7.75
PF00005	ABC_tran	2.11
PF13802	Gal_mutarotas_2	1.41
PF00069	Pkinase	1.41
PF07228	SpoIIE	0.70
PF00578	AhpC-TSA	0.70
PF06983	3-dmu-9_3-mt	0.70
PF17137	DUF5110	0.70
PF00378	ECH_1	0.70
PF16011	CBM9_2	0.70
PF13560	HTH_31	0.70
PF00348	polyprenyl_synt	0.70
PF12704	MacB_PCD	0.70
PF07883	Cupin_2	0.70
PF00171	Aldedh	0.70
PF00474	SSF	0.70
PF12867	DinB_2	0.70
PF00515	TPR_1	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG3476	Tryptophan-rich sensory protein TspO/CrtK (mitochondrial benzodiazepine receptor homolog)	Signal transduction mechanisms [T]	7.75
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.63
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.70
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	0.70
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.70
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.70
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.70
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.96 %
Unclassified	root	N/A	7.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.96 %
Unclassified	root	N/A	7.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.96 %
Unclassified	root	N/A	7.04 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	78.17 %
Unclassified	root	N/A	7.04 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.41 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.70 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.27 %
Unclassified	root	N/A	7.04 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.41 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.41 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.70 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.27 %
Unclassified	root	N/A	7.04 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.41 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.41 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.27 %
Unclassified	root	N/A	7.04 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.41 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1.41 %
Dehalococcoidales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales	0.70 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.70 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.27 %
Unclassified	root	N/A	7.04 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.41 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.41 %
Dehalococcoidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae	0.70 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.70 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.27 %
Unclassified	root	N/A	7.04 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.41 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.41 %
Dehalococcoides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides	0.70 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	0.70 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.27 %
Unclassified	root	N/A	7.04 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.41 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.41 %
Dehalococcoides mccartyi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	0.70 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	0.70 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10127708	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300000789\|JGI1027J11758_12817655	All Organisms → cellular organisms → Bacteria	2133	Open in IMG/M
3300002908\|JGI25382J43887_10150216	All Organisms → cellular organisms → Bacteria → Acidobacteria	1183	Open in IMG/M
3300002914\|JGI25617J43924_10089108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300002914\|JGI25617J43924_10319108	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300003220\|JGI26342J46808_1021504	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300004092\|Ga0062389_100478050	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300004092\|Ga0062389_104085734	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300004114\|Ga0062593_100073517	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2275	Open in IMG/M
3300005176\|Ga0066679_10454990	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300005176\|Ga0066679_10976630	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300005177\|Ga0066690_10911265	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300005295\|Ga0065707_11026777	Not Available	532	Open in IMG/M
3300005445\|Ga0070708_101862904	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300005542\|Ga0070732_10365399	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300005560\|Ga0066670_10636813	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300005564\|Ga0070664_100120980	All Organisms → cellular organisms → Bacteria	2292	Open in IMG/M
3300005569\|Ga0066705_10024184	All Organisms → cellular organisms → Bacteria → Acidobacteria	3183	Open in IMG/M
3300005586\|Ga0066691_10810756	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300006041\|Ga0075023_100097787	All Organisms → cellular organisms → Bacteria → Acidobacteria	1010	Open in IMG/M
3300006059\|Ga0075017_101622245	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300006162\|Ga0075030_101298430	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300006172\|Ga0075018_10417519	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300006794\|Ga0066658_10032899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2119	Open in IMG/M
3300006804\|Ga0079221_11161194	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300007258\|Ga0099793_10271145	All Organisms → cellular organisms → Bacteria → Acidobacteria	821	Open in IMG/M
3300009038\|Ga0099829_10404288	All Organisms → cellular organisms → Bacteria → Acidobacteria	1129	Open in IMG/M
3300009088\|Ga0099830_10123577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1961	Open in IMG/M
3300009089\|Ga0099828_10220982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1693	Open in IMG/M
3300009792\|Ga0126374_11184251	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300010048\|Ga0126373_11016743	Not Available	894	Open in IMG/M
3300010361\|Ga0126378_10309239	All Organisms → cellular organisms → Bacteria → Acidobacteria	1685	Open in IMG/M
3300010361\|Ga0126378_10329269	All Organisms → cellular organisms → Bacteria → Acidobacteria	1634	Open in IMG/M
3300010361\|Ga0126378_11588436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300010362\|Ga0126377_13470700	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300010379\|Ga0136449_102552694	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300011120\|Ga0150983_12007833	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300011271\|Ga0137393_10133858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2055	Open in IMG/M
3300011271\|Ga0137393_11123107	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300012096\|Ga0137389_10631843	All Organisms → cellular organisms → Bacteria → Acidobacteria	920	Open in IMG/M
3300012096\|Ga0137389_10785218	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300012199\|Ga0137383_11209373	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300012199\|Ga0137383_11222022	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300012203\|Ga0137399_10149959	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300012203\|Ga0137399_10379310	All Organisms → cellular organisms → Bacteria → Acidobacteria	1177	Open in IMG/M
3300012203\|Ga0137399_11734737	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300012205\|Ga0137362_10761112	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300012205\|Ga0137362_11028043	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300012205\|Ga0137362_11321759	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300012361\|Ga0137360_11367869	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300012361\|Ga0137360_11716634	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300012362\|Ga0137361_10413775	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300012582\|Ga0137358_10001149	All Organisms → cellular organisms → Bacteria	13915	Open in IMG/M
3300012685\|Ga0137397_10379599	All Organisms → cellular organisms → Bacteria → Acidobacteria	1053	Open in IMG/M
3300012917\|Ga0137395_10646395	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300012917\|Ga0137395_10719204	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300012924\|Ga0137413_11633577	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300012944\|Ga0137410_11157144	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300012951\|Ga0164300_10783464	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300012977\|Ga0134087_10180826	All Organisms → cellular organisms → Bacteria → Acidobacteria	934	Open in IMG/M
3300014150\|Ga0134081_10167177	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300015051\|Ga0137414_1136742	All Organisms → cellular organisms → Bacteria → Acidobacteria	1024	Open in IMG/M
3300015052\|Ga0137411_1290071	All Organisms → cellular organisms → Bacteria → Acidobacteria	4045	Open in IMG/M
3300015242\|Ga0137412_10580979	All Organisms → cellular organisms → Bacteria → Acidobacteria	850	Open in IMG/M
3300015372\|Ga0132256_101330897	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300015374\|Ga0132255_105496195	Not Available	536	Open in IMG/M
3300016357\|Ga0182032_10290403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1287	Open in IMG/M
3300016371\|Ga0182034_11988265	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300016404\|Ga0182037_11106604	Not Available	693	Open in IMG/M
3300018060\|Ga0187765_10712363	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300018468\|Ga0066662_10778740	All Organisms → cellular organisms → Bacteria → Acidobacteria	925	Open in IMG/M
3300018468\|Ga0066662_11839684	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300019789\|Ga0137408_1243516	All Organisms → cellular organisms → Bacteria → Acidobacteria	973	Open in IMG/M
3300019868\|Ga0193720_1017342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014	Open in IMG/M
3300020199\|Ga0179592_10022752	All Organisms → cellular organisms → Bacteria → Acidobacteria	2798	Open in IMG/M
3300020199\|Ga0179592_10427968	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300020579\|Ga0210407_10228282	All Organisms → cellular organisms → Bacteria → Acidobacteria	1449	Open in IMG/M
3300020579\|Ga0210407_10945430	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300020580\|Ga0210403_10108416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2254	Open in IMG/M
3300020581\|Ga0210399_10311659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1314	Open in IMG/M
3300020583\|Ga0210401_10184223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	1944	Open in IMG/M
3300020583\|Ga0210401_11344691	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300021086\|Ga0179596_10565147	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300021088\|Ga0210404_10488036	Not Available	695	Open in IMG/M
3300021171\|Ga0210405_11185634	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300021178\|Ga0210408_11203222	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300021403\|Ga0210397_10802167	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300021405\|Ga0210387_10207373	All Organisms → cellular organisms → Bacteria → Acidobacteria	1702	Open in IMG/M
3300021474\|Ga0210390_10531189	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300021476\|Ga0187846_10288490	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300021478\|Ga0210402_10684186	All Organisms → cellular organisms → Bacteria → Acidobacteria	948	Open in IMG/M
3300021478\|Ga0210402_11423836	Not Available	620	Open in IMG/M
3300021559\|Ga0210409_10020341	All Organisms → cellular organisms → Bacteria	6458	Open in IMG/M
3300021559\|Ga0210409_10083035	All Organisms → cellular organisms → Bacteria → Acidobacteria	2966	Open in IMG/M
3300021559\|Ga0210409_10399920	All Organisms → cellular organisms → Bacteria → Acidobacteria	1229	Open in IMG/M
3300022533\|Ga0242662_10351165	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300024288\|Ga0179589_10407490	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300025912\|Ga0207707_10301629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1385	Open in IMG/M
3300025917\|Ga0207660_10151685	All Organisms → cellular organisms → Bacteria → Acidobacteria	1781	Open in IMG/M
3300025931\|Ga0207644_10167072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1715	Open in IMG/M
3300026285\|Ga0209438_1070686	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300026285\|Ga0209438_1151675	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	610	Open in IMG/M
3300026310\|Ga0209239_1225483	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300026322\|Ga0209687_1112421	All Organisms → cellular organisms → Bacteria → Acidobacteria	880	Open in IMG/M
3300026322\|Ga0209687_1210787	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300026322\|Ga0209687_1222714	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300026323\|Ga0209472_1005886	All Organisms → cellular organisms → Bacteria	6517	Open in IMG/M
3300026359\|Ga0257163_1046964	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300026482\|Ga0257172_1074000	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300026524\|Ga0209690_1187940	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300026551\|Ga0209648_10204781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1502	Open in IMG/M
3300026552\|Ga0209577_10080293	All Organisms → cellular organisms → Bacteria → Acidobacteria	2684	Open in IMG/M
3300027660\|Ga0209736_1127694	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300027671\|Ga0209588_1179525	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300027855\|Ga0209693_10136297	All Organisms → cellular organisms → Bacteria → Acidobacteria	1213	Open in IMG/M
3300027862\|Ga0209701_10170419	All Organisms → cellular organisms → Bacteria → Acidobacteria	1316	Open in IMG/M
3300027862\|Ga0209701_10173644	All Organisms → cellular organisms → Bacteria → Acidobacteria	1301	Open in IMG/M
3300027867\|Ga0209167_10640017	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300027879\|Ga0209169_10286802	All Organisms → cellular organisms → Bacteria → Acidobacteria	864	Open in IMG/M
3300027882\|Ga0209590_11057559	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300027898\|Ga0209067_10137722	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300031562\|Ga0310886_10932038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300031718\|Ga0307474_10724233	All Organisms → cellular organisms → Bacteria → Acidobacteria	786	Open in IMG/M
3300031754\|Ga0307475_10306338	All Organisms → cellular organisms → Bacteria → Acidobacteria	1275	Open in IMG/M
3300031754\|Ga0307475_10797979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300031754\|Ga0307475_11056335	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300031754\|Ga0307475_11532896	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300031780\|Ga0318508_1083734	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300031820\|Ga0307473_11003466	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300031943\|Ga0310885_10337606	Not Available	788	Open in IMG/M
3300031962\|Ga0307479_11253809	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300031962\|Ga0307479_11711642	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300032009\|Ga0318563_10364818	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	782	Open in IMG/M
3300032076\|Ga0306924_12485346	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	520	Open in IMG/M
3300032180\|Ga0307471_100290297	All Organisms → cellular organisms → Bacteria → Acidobacteria	1716	Open in IMG/M
3300032205\|Ga0307472_100550875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1007	Open in IMG/M
3300032205\|Ga0307472_102741335	Not Available	504	Open in IMG/M
3300032829\|Ga0335070_11283615	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300032892\|Ga0335081_11995824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300033829\|Ga0334854_043046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.18%
Host-Associated	Host-Associated	2.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.85%
Aquatic	Environmental → Aquatic	6.34%
Plants	Host-Associated → Plants	2.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.44%
Sediment	Environmental → Aquatic → Sediment	4.23%
Freshwater	Environmental → Aquatic → Freshwater	2.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.11%
Peat	Environmental → Terrestrial → Peat	0.70%
Cave	Environmental → Terrestrial → Cave	0.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.39%
Loam	Environmental → Terrestrial → Soil → Loam	4.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.82%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.41%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.34%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.82%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.41%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.41%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.41%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.41%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.41%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.41%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.70%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101277082	3300000597	Forest Soil	TFATVDDKIETVAVGSRPVRKPAKETPLEKGMNIVFSLLLAGTVVGLWIYFH*
JGI1027J11758_128176553	3300000789	Soil	IDTITVDARQRKPVHETATEHRVNVVFSVLLVATVVGLWIYFR*
JGI25382J43887_101502161	3300002908	Grasslands Soil	ETIAVGIPQRKPAFETPTEHAINVVFSLMLLATVVGLWIYFR*
JGI25617J43924_100891081	3300002914	Grasslands Soil	ETVAVGIPVRKPAHETPTERAINIVFSLVLLATVVGLWIYFR*
JGI25617J43924_103191082	3300002914	Grasslands Soil	FATVDDKMETVAVGIPVRKPXHETPTERAINVVFSLVLLAXVVGLWIYFR*
JGI26342J46808_10215041	3300003220	Bog Forest Soil	TVVESRQQRKPAHETATERRINIFFSFLLLATVIGLWIYFR*
Ga0062389_1004780503	3300004092	Bog Forest Soil	EKIETTVVDPRQRKPAKETPTEHRLNIFFSLLLLGTVIGLWIYFR*
Ga0062389_1040857342	3300004092	Bog Forest Soil	TFATVDDKIETTVVGQSQRKPAHETPTEHRINVFASLLLLATVIGLWIYFR*
Ga0062593_1000735171	3300004114	Soil	ATVDDKMDTIAVGGAPERKPARETAAEHRINLIFTWLLIATVVGLWIYFR*
Ga0066679_104549902	3300005176	Soil	DDKMETVAVGIPQRKPAQETATEHAINVVFSLMLLATVVGLWIYFR*
Ga0066679_109766302	3300005176	Soil	EAVAVGTPVRKPAQETPREHRLNVIFSLLLVATVVGLWIYFR*
Ga0066690_109112652	3300005177	Soil	EKIETVAVGGPPLRKPAHETPMEHRINIVFSLLLLATVIGLWVYFR*
Ga0065707_102852991	3300005295	Switchgrass Rhizosphere	GLTFATVDDKMDTVAVGVPERKPARETPGERRMNVIFTCLLVATVIGLWIYFR*
Ga0065707_110267772	3300005295	Switchgrass Rhizosphere	TVDDKMDTIAVGGAPERKPARETAAEHRINLIFTWLLIATVVGLWIYFR*
Ga0070708_1018629042	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LTFATVDEKMEAVAVGTPVRKPAHETPTERRINVIFSLLLVGTVISLWIYFR*
Ga0070732_103653991	3300005542	Surface Soil	ATVDDKMDTVVVDARVRKPAHETATEHRINIAFSLLLLATVIGLWIYFR*
Ga0066670_106368131	3300005560	Soil	IGGPPMRKPAKETPAEHAINIAFSLLLLGTVIGLWIYFR*
Ga0070664_1001209802	3300005564	Corn Rhizosphere	MSFAFQKPAAETPGEHRINVAFSVLLVATVVGLWIYFR*
Ga0066705_100241843	3300005569	Soil	VGGPPMRKPAYETPAEHAINIVFSLLLLGTVVGLWIYFR*
Ga0066691_108107561	3300005586	Soil	FATVGDKMETVAVGIPQRKPAHETPTEHAVNVVFSLLLLATVVGLWIYFR*
Ga0075023_1000977871	3300006041	Watersheds	EKMEAVAVGTPVRKPAQETPMEHRINVVFSLLLLATVIGLWIYFR*
Ga0075028_1004362152	3300006050	Watersheds	DHKPAAETAAEHRLNVIFSFLLSATVVGLWIHFR*
Ga0075017_1016222451	3300006059	Watersheds	PVRKPAHETPTERRINIFASLLLLATVIGLWIYFR*
Ga0075030_1012984301	3300006162	Watersheds	GTPVRKPAHETPTEHRINIFASLLLLATVIGLWIYFR*
Ga0075018_104175192	3300006172	Watersheds	AGLTFATVDEKMDTFASGMPVRKPAHETPLEHRVNVIFSLLLLATVIGLWIYFR*
Ga0066658_100328991	3300006794	Soil	KMETIAVGIPQRKPAFETPTEHAINVVFSLMLLATVVGLWIYFR*
Ga0079221_111611942	3300006804	Agricultural Soil	VGGPPMRKPAKETPAEHAINIAFSLLLLATVIGLWIYFR*
Ga0099793_102711452	3300007258	Vadose Zone Soil	PVRKPAQETPMEHRLNVIFSLLLVATVVGLWIYFR*
Ga0099829_104042881	3300009038	Vadose Zone Soil	IETVAVGGPPPRKPAHETPMEHTLNVVFSLLLLSTVIGLWIYFR*
Ga0099830_101235773	3300009088	Vadose Zone Soil	VDDKMETVAVGIPQRKPAHETPTEHAINVVFSLLLLVTVIGLWIYFR*
Ga0099828_102209821	3300009089	Vadose Zone Soil	TFATVDDKMETVAVGIPVRKPAHETPTERAINIVFSLVLLATVVGLWIYFR*
Ga0126374_111842511	3300009792	Tropical Forest Soil	LAGLTFATVDEKMDITPVGTPVRKPAHETATEHRLNLAFSGLLLATVIGLWIYFR*
Ga0126373_110167431	3300010048	Tropical Forest Soil	TPVGSPVRKPAHETATELRINIAFSLLLLATVISLWVYFR*
Ga0126378_103092391	3300010361	Tropical Forest Soil	PPMRKPAKETPLEHGMNIVFSLLLAGTVVGLWIYFH*
Ga0126378_103292691	3300010361	Tropical Forest Soil	VRKPAKETPMEHAINIAFSLLLLGTVIGLWIYFR*
Ga0126378_115884361	3300010361	Tropical Forest Soil	PPMRKPAKETPMEHAINIAFSLLLLGTVIGLWIYFR*
Ga0126377_134707001	3300010362	Tropical Forest Soil	IRKPAKETPAEHAFNIAFSLLLLGTVIGLWIYFR*
Ga0136449_1025526942	3300010379	Peatlands Soil	AVGIPQRKPAHETPTERLINIVASLLLLATVISLWIYFR*
Ga0150983_120078331	3300011120	Forest Soil	VETTVVDPRQRKPAHETPTEHRINVVASLLLLATVIGLWIYFR*
Ga0137393_101338581	3300011271	Vadose Zone Soil	FATVDDKMETVAVGIPVRKPAFETPTERAINVVFSLVLLATVVGLWIYFR*
Ga0137393_111231072	3300011271	Vadose Zone Soil	DDKMETVAVGIPVRKPAHETPTERAINIVFSLVLLATVVGLWIYFR*
Ga0137389_106318433	3300012096	Vadose Zone Soil	VAVGGPAPRKPAHETPMEHTFNVVFSLLLLSTVIGLWIYFR*
Ga0137389_107852182	3300012096	Vadose Zone Soil	AVGTPVRKPAHETPTERRVNVIFSLLLLATVISLWIYFR*
Ga0137383_112093732	3300012199	Vadose Zone Soil	VDDKIDTIAVGGPPMRKPAHETPMERAINVAFSLLLLGTVVGLWIYFR*
Ga0137383_112220222	3300012199	Vadose Zone Soil	PPMRKPAKETPLEHGINIAFSLLLFGAVVGLWIYFR*
Ga0137399_101499594	3300012203	Vadose Zone Soil	FATVDDKMETTVVDTRQRKPAHETAAEHRINVIFSVLLLATVIGLWIYFR*
Ga0137399_103793103	3300012203	Vadose Zone Soil	VGTSVRKPAHETPTERRINIIFSLLLLATVIGLWIYFR*
Ga0137399_117347371	3300012203	Vadose Zone Soil	VDEKMEAVAVGTPVRKPAHETPTERRINVIFSLLLVGTVISLWIYFR*
Ga0137362_107611121	3300012205	Vadose Zone Soil	KRLAGLTFATVGDKMETVAVGIPVRKPAFETPTERAINVVFSLVLLATVVGLWIYFR*
Ga0137362_110280432	3300012205	Vadose Zone Soil	VRNPAHETPTERAINVVFSLVLLATVVGLWIYFR*
Ga0137362_113217592	3300012205	Vadose Zone Soil	VDDKMEAVAVGIPQRKPAHETPTERAINVVFSLMLLATVVGLWIYFR*
Ga0137360_113678692	3300012361	Vadose Zone Soil	DEKMEAVAVGTPVRKPAHETPTERRVNIIFSLVLLATVISLWIYFR*
Ga0137360_117166342	3300012361	Vadose Zone Soil	FATVGDKMETVAVGIPVRKPAFETPTERAINVVFSLVLLATVVGLWIYFR*
Ga0137361_104137751	3300012362	Vadose Zone Soil	TTVVDTRQRKPAHETAAEHRINVIFSVLLLATVIGLWIYFR*
Ga0137358_1000114913	3300012582	Vadose Zone Soil	VRKPAHETPTERRVNVIFSLLLLATVISLWIYFR*
Ga0137397_103795993	3300012685	Vadose Zone Soil	GLTFATVDDKMETVAVGVPQRKPAHETPAEYAINVVFSLLLLATVIGLWVYFR*
Ga0137395_106463952	3300012917	Vadose Zone Soil	RLAGLTFATVGDKMETVAVGIPVRKPAHETPTEYAVNVVFSLILLATVVGLWIYFR*
Ga0137395_107192042	3300012917	Vadose Zone Soil	SVRKPAHETPTERRINIIFSLLLLATVIGLWIYFR*
Ga0137413_116335772	3300012924	Vadose Zone Soil	DEKMAAVPVGTSVRKPAHETPAEHRMNVIFSLLLLATVVSLWIYFR*
Ga0137410_111571442	3300012944	Vadose Zone Soil	LTFATVDDKMETTVVDTRQRKPAHETAAEHRINVIFSVMLLATVIGLWIYFR*
Ga0164300_107834642	3300012951	Soil	FATVDEKIETTVVDPRQRKPAHETQTERVINIVFSFLLLGTVIGLWIYFR*
Ga0134087_101808263	3300012977	Grasslands Soil	FAIGGPPMRKPAKETPAEHAINIAFSLLLLGTVIGLWIYFR*
Ga0134081_101671772	3300014150	Grasslands Soil	ATVDDKMETVAVGIPQRKPAHETPTEHAINVVFSLMLLATVVGLWIYFR*
Ga0137414_11367423	3300015051	Vadose Zone Soil	KMAAVPVGTSVRKPAHETPAEHRMNVIFSLLLLATVISLWVYFR*
Ga0137411_12900719	3300015052	Vadose Zone Soil	MTSSDGMPLRKPAHETPMEHRINVIFSFLLLATVIGLWIYFR*
Ga0137412_105809792	3300015242	Vadose Zone Soil	PVGTSVRKPAHETPAEHRMNVIFSLLLLATVISLWVYFR*
Ga0132256_1013308972	3300015372	Arabidopsis Rhizosphere	TFATVAEKIETTHLSSPQRKPAHETPAERRMNVAFSLLLVVTVVALWIYFR*
Ga0132255_1054961952	3300015374	Arabidopsis Rhizosphere	TVDDKMDTVPVGMPVRKPAHETPMEHRVNVFFSLLLLATVIGLWIYFR*
Ga0182032_102904032	3300016357	Soil	PQRKPMLETAAEHRINVAFSLLLLATVIGLWIYFR
Ga0182034_119882652	3300016371	Soil	DDKIETVAVDSPPMRKHAKETPLEHGMNIVFSLLLAGTVVGLWIYFR
Ga0182037_111066042	3300016404	Soil	ETTVVSSPARKPAFETPLEHRLNVFFSLLLLATVIGLWIYFR
Ga0187765_107123631	3300018060	Tropical Peatland	SPQRKPAHETPMEHRINVIFSLLLAATVIALWIYFR
Ga0066662_107787401	3300018468	Grasslands Soil	DDKIETVAVGGPPPRKPAHETPMEHTFNVVFSLLLLSTVIGLWIYFR
Ga0066662_118396841	3300018468	Grasslands Soil	PPLRKPAHETPMEHRINIVFSLLLLATVIGLWVYFR
Ga0137408_12435161	3300019789	Vadose Zone Soil	METVAVGIPVRKPAHETPTERAINVVFSLVLLATVVGLWIYFR
Ga0193720_10173423	3300019868	Soil	VTFTEGGRKPAAETPAEHRVNVAFSVLLVATVVGLWVYFR
Ga0179592_100227521	3300020199	Vadose Zone Soil	VAVGIPVRKPAHETPTERAINVVFSLVLLATVVGLWIYFR
Ga0179592_104279682	3300020199	Vadose Zone Soil	VAVGIPQRKPAHETPTERAVNVIFSLLLLATVVGLWIYFR
Ga0210407_102282821	3300020579	Soil	TVVDPRQRKPAKETPTEHRLNIFFSLLLLGTVIGLWIYFR
Ga0210407_109454302	3300020579	Soil	KMETVAVGISVRKPAHETPVERAINVVFSLLLLATVVGLWIYFR
Ga0210403_101084163	3300020580	Soil	TFATVDDKMETVAVGVPQRKPAHETPAEHAINVVFSLLLLATVIGLWIYFR
Ga0210399_103116591	3300020581	Soil	EKMDAVAVGTPQRKPALETAAEHRMNLAFSGLLLATVIGLWIYFR
Ga0210401_101842234	3300020583	Soil	RGMDYKPAAETPQEHRLNVIFSLLLLATVIGLWFHFR
Ga0210401_113446912	3300020583	Soil	EKMEAVAVGTPVRKPAQETPMEHRINVVFSLLLLATVIGLWIYFR
Ga0179596_105651471	3300021086	Vadose Zone Soil	IPQRKPAHETPTERAVNVIFSLLLLATVVGLWIYFR
Ga0210404_104880361	3300021088	Soil	TVGEKIETTNVGSPVRKPAEETPGEHRMNVIFSLLLLATVIGLWIYFR
Ga0210405_111856342	3300021171	Soil	GLTFATVDEKIETTVVDPRQRKPAKETPTEHRLNIFFSLLLLGTVIGLWIYFR
Ga0210408_112032221	3300021178	Soil	VDEKIETTVVDPRQRKPAKETPTEHRLNIFFSLLLLGTVIGLWIYFR
Ga0210397_108021672	3300021403	Soil	VDDKMETVAVGIPVRKPAHETPAERAINVVFSLLLLATVVGLWIYF
Ga0210387_102073733	3300021405	Soil	FATVDDKMETVAVGTPVRKPAHETPTERRINIFASLLLLATVIGLWIYFR
Ga0210390_105311891	3300021474	Soil	ETVPVGTPVRKPAQETPTENRINVAFSLLLLATVIGLWIYFR
Ga0187846_102884902	3300021476	Biofilm	PQRKPAHETPMEHALNVVFSLVLLSIVIGLWIYFR
Ga0210402_106841861	3300021478	Soil	TFATVGEKMDVIPMGMPVRKPAHETPMEHRINVIFSLLLLATVIGLWIYFR
Ga0210402_114238361	3300021478	Soil	FATVNEKMETTVVDTRVRKPAQETAAEHRVNVIFSLALLATVIGLWIYFR
Ga0210409_100203411	3300021559	Soil	VGIPVRKPAHETPTERAVNVVFSLVLLATVVGLWIYFR
Ga0210409_100830353	3300021559	Soil	TVDDKMETVAVGVPQRKPAHETPAEHAINVVFSLLLLATVIGLWVYFR
Ga0210409_103999201	3300021559	Soil	IPVRKPAHETPAERAVNVVFSLVLLATVVGLWIYFR
Ga0242662_103511652	3300022533	Soil	VAVGVPQRKPAHETPAEHAINVVFSLLLLATVIGLWVYFR
Ga0179589_104074902	3300024288	Vadose Zone Soil	PVGTSVRKPAHETPAEHRMNVIFSLLLLATVISLWVYFR
Ga0207707_103016291	3300025912	Corn Rhizosphere	LVMSFAFQKPAAETPGEHRINVAFSVLLVATVVGLWIYFR
Ga0207660_101516853	3300025917	Corn Rhizosphere	TFATVDEKIETTVVDPRQRKPAHETQTERVINIVFSFLLLGTVIGLWIYFR
Ga0207644_101670721	3300025931	Switchgrass Rhizosphere	MSFAFQKPAAETPGEHRINVAFSVLLVATVVGLWIYFR
Ga0209438_10706861	3300026285	Grasslands Soil	AVGTPVRKPAQETPMEHRLNVIFSLLLVATVVGLWIYFR
Ga0209438_11516752	3300026285	Grasslands Soil	FATVDEKMDTVPLGMPVRKPAQETPLEQRINVIFSLLLVATVVGLWIYFR
Ga0209239_12254832	3300026310	Grasslands Soil	PQRKPAQETPSEHAINVVFSLMLLATVVGLWIYFR
Ga0209687_11124211	3300026322	Soil	FATVDDKIETVAVGSPPMRKPAKETPLEHGINIAFSLLLLGTVVGLWIYFR
Ga0209687_12107872	3300026322	Soil	EKMDTTMVKTEYKPASETRLEHTVNVVFSLLLVVTVVGLWIYFR
Ga0209687_12227142	3300026322	Soil	TFATVDDKIETIAVGGPPMRKPAKETPAEHAINMAFSLLLLGAVVGLWIYFR
Ga0209472_10058865	3300026323	Soil	ATVDDKIETVAVGSPPMRKPAKETPLEHGINIAFSLLLLGTVVGLWIYFR
Ga0257163_10469642	3300026359	Soil	TFATVDEKMDTIPAGTPVRKPAQETPLEHRLNVIFSLLLVATVVGLWIYFR
Ga0257172_10740002	3300026482	Soil	PVRKPAHETPTERRVNVIFSLLLLATVISLWIYFR
Ga0209690_11879402	3300026524	Soil	TVDDKIETVAVGSPPMRKPAKETPLEHGINIAFSLLLLGTVVGLWIYFR
Ga0209648_102047811	3300026551	Grasslands Soil	TVAVGIPVRKPAHETPTERAINIVFSLVLLATVVGLWIYFR
Ga0209577_100802933	3300026552	Soil	TVDDKMETVAVGIPQRKPAQETATEHAINVVFSLMLLATVVGLWIYFR
Ga0209736_11276942	3300027660	Forest Soil	AVPVGTSVRKPAHETPTERRVNIIFSLLLLGTVISLWIYFR
Ga0209588_11795251	3300027671	Vadose Zone Soil	KMETVAVGIPVRKPAHETPTERAINVVFSLVLLATVVGLWIYFR
Ga0209693_101362971	3300027855	Soil	VGIPQRKPAHETPTERRINIFFSLLLLATVIGLWIYFR
Ga0209701_101704193	3300027862	Vadose Zone Soil	METVAVGIPQRKPAHETPTEHAINVVFSLLLLATVIGLWIYFR
Ga0209701_101736443	3300027862	Vadose Zone Soil	METVAVGIPQRKPAHETPTEHAINVVFSLLLLVTVIGLWIYFR
Ga0209167_106400171	3300027867	Surface Soil	VGTPVRKPAQETPMEHRVNVVFSLLLLATVIGLWIYFR
Ga0209169_102868023	3300027879	Soil	TVGIPQRKPAHETPTERRINIFFSLLLLATVIGLWIYFR
Ga0209590_110575591	3300027882	Vadose Zone Soil	LHGIARKPAKETPTERMVNIVFSLLLLATVVGLWIYFR
Ga0209067_101377221	3300027898	Watersheds	PQRKPAKETPTEHMLNVVFSLTLLATVVGLWIYFR
Ga0310886_109320381	3300031562	Soil	SEYKPAPETPAERRVNIIFSVLLVATVLGLWIYFR
Ga0307474_107242332	3300031718	Hardwood Forest Soil	VGDKMETVAVGIPQRKPAFETPTERAVNVIFSLVLLATVVGLWIYFR
Ga0307475_103063383	3300031754	Hardwood Forest Soil	KMEAVAVGTPVRKPAHETPTERRVNVIFSLLLLATVISLWIYFR
Ga0307475_107979792	3300031754	Hardwood Forest Soil	GTPVRKPAQETPTENRINVAFSLLLLATVIGLWIYFR
Ga0307475_110563351	3300031754	Hardwood Forest Soil	LTFATVADKMETVAVGVPVRKPAFETPTERAINVVFSLVLLATVIGLWIYFR
Ga0307475_115328961	3300031754	Hardwood Forest Soil	DKMETVAVGVPQRKPAHETPAEHAINVVFSLLLLATVIGLWVYFR
Ga0318508_10837341	3300031780	Soil	AVGSPPARKPAKETPLEHGINIAFSLLLLGTVVGLWIYFR
Ga0307473_110034661	3300031820	Hardwood Forest Soil	GLTFATVDEKMAAVPVGTSVRKPAHETPAEHRMNVIFSLLLLGTVISLWIYFR
Ga0310885_103376061	3300031943	Soil	RSEYKPAPETPAERRVNIIFSVLLVATVLGLWIYFR
Ga0307479_112538092	3300031962	Hardwood Forest Soil	TVDDKMEAVAVGIPQRKPAHETPTERAINVVFSLMLLATVVGLWIYFR
Ga0307479_117116422	3300031962	Hardwood Forest Soil	LTFATVDEKMDAVPVGVPVRKPAHETPTEHRVNVAFSLLLLATVIGLWIYFR
Ga0318563_103648182	3300032009	Soil	KMDTIPVGTPVRKPAHETEMEHRVNVVFSLLLVGTVVALWVYFR
Ga0306924_124853462	3300032076	Soil	SSPTRKPALETPLEHRLNVFFSLLLLATVVGLWIYFR
Ga0307471_1002902973	3300032180	Hardwood Forest Soil	TPVRKPAHETPMERRINIAFSLLLLATVIGLWIYFR
Ga0307472_1005508751	3300032205	Hardwood Forest Soil	GLTFATVGDKMEVTAVSTPQRKPAHETVAEHRINVAFSALLLATVIGLWIYFR
Ga0307472_1027413351	3300032205	Hardwood Forest Soil	EAVAVGTPVRKPAHETATEQRMNVVFSLLLLATVIGLWIYFR
Ga0335070_112836152	3300032829	Soil	ETIAVGAPQRKPAHETAAEHRLNVIFSLLLLATVISLWVYFR
Ga0335081_119958241	3300032892	Soil	LETTVVSTPQRKPAHETPMEHRINVVFSLLLLATVIGLWIYFR
Ga0334854_043046_27_158	3300033829	Soil	MDVSVVSAGARRPAAETRGEHRWNVLFSLVLIATVVGLWIYFR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052835

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences