Metagenome / Metatranscriptome Family F052821

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052821
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	54 residues
Representative Sequence	MEPKPFRLHKTEGANNHVKQSDAFIFARNPIGVTYNQFPAMLTSVIHD
Number of Associated Samples	105
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.39 %
% of genes near scaffold ends (potentially truncated)	57.04 %
% of genes from short scaffolds (< 2000 bps)	81.69 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.408 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.718 % of family members)
Environment Ontology (ENVO)	Unclassified (28.873 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.028 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 0.00% Coil/Unstructured: 75.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF08447	PAS_3	7.04
PF00072	Response_reg	2.11
PF09084	NMT1	2.11
PF04909	Amidohydro_2	2.11
PF04545	Sigma70_r4	2.11
PF13488	Gly-zipper_Omp	1.41
PF13401	AAA_22	1.41
PF13683	rve_3	1.41
PF03401	TctC	0.70
PF04255	DUF433	0.70
PF04392	ABC_sub_bind	0.70
PF02954	HTH_8	0.70
PF03720	UDPG_MGDP_dh_C	0.70
PF00571	CBS	0.70
PF02700	PurS	0.70
PF00589	Phage_integrase	0.70
PF00128	Alpha-amylase	0.70
PF08031	BBE	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	2.11
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	2.11
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.70
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.70
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.70
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.70
COG1828	Phosphoribosylformylglycinamidine (FGAM) synthase, PurS subunit	Nucleotide transport and metabolism [F]	0.70
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.70
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.70
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.70
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.70

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.41 %
Unclassified	root	N/A	48.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.41 %
Unclassified	root	N/A	48.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.41 %
Unclassified	root	N/A	48.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.41 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.70 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.59 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	32.39 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.41 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.59 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	32.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.41 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.59 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	30.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.41 %
unclassified candidate division NC10	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.70 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.59 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.41 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	0.70 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.70 %
Ralstonia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.59 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.41 %
Ralstonia pseudosolanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pseudosolanacearum	0.70 %
Geomesophilobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geomesophilobacter	0.70 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.59 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.41 %
Geomesophilobacter sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geomesophilobacter → Geomesophilobacter sediminis	0.70 %
Ralstonia pseudosolanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pseudosolanacearum	0.70 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig1191122	Not Available	519	Open in IMG/M
2170459024\|GZRSKLJ01DBO2R	Not Available	507	Open in IMG/M
3300000955\|JGI1027J12803_103356945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	936	Open in IMG/M
3300002099\|JGI24808J26613_1005898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3028	Open in IMG/M
3300002899\|JGIcombinedJ43975_10099848	Not Available	531	Open in IMG/M
3300004633\|Ga0066395_10679906	Not Available	609	Open in IMG/M
3300005294\|Ga0065705_10563062	Not Available	716	Open in IMG/M
3300005294\|Ga0065705_11098682	Not Available	514	Open in IMG/M
3300005559\|Ga0066700_10549394	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	806	Open in IMG/M
3300005568\|Ga0066703_10159497	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300005981\|Ga0081538_10019303	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5074	Open in IMG/M
3300005981\|Ga0081538_10251068	Not Available	674	Open in IMG/M
3300006173\|Ga0070716_100170349	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1420	Open in IMG/M
3300006797\|Ga0066659_11207472	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631	Open in IMG/M
3300006797\|Ga0066659_11557478	Not Available	554	Open in IMG/M
3300006852\|Ga0075433_11122312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	683	Open in IMG/M
3300006852\|Ga0075433_11360545	Not Available	614	Open in IMG/M
3300006854\|Ga0075425_102773358	Not Available	539	Open in IMG/M
3300006880\|Ga0075429_101459165	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	595	Open in IMG/M
3300006880\|Ga0075429_101936706	Not Available	510	Open in IMG/M
3300006904\|Ga0075424_102785081	Not Available	509	Open in IMG/M
3300006914\|Ga0075436_100038710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3291	Open in IMG/M
3300007076\|Ga0075435_100407766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1169	Open in IMG/M
3300009094\|Ga0111539_10800228	Not Available	1097	Open in IMG/M
3300009100\|Ga0075418_10249316	Not Available	1891	Open in IMG/M
3300009137\|Ga0066709_100784513	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300009137\|Ga0066709_101535660	Not Available	958	Open in IMG/M
3300009147\|Ga0114129_12180381	Not Available	667	Open in IMG/M
3300009156\|Ga0111538_11146064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	983	Open in IMG/M
3300009157\|Ga0105092_10089877	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300009157\|Ga0105092_10400831	Not Available	781	Open in IMG/M
3300009157\|Ga0105092_10706566	Not Available	587	Open in IMG/M
3300009157\|Ga0105092_10866027	Not Available	532	Open in IMG/M
3300009168\|Ga0105104_10407287	Not Available	757	Open in IMG/M
3300009610\|Ga0105340_1003386	All Organisms → cellular organisms → Bacteria	6714	Open in IMG/M
3300009610\|Ga0105340_1374721	Not Available	632	Open in IMG/M
3300009814\|Ga0105082_1096063	Not Available	554	Open in IMG/M
3300009818\|Ga0105072_1001575	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3384	Open in IMG/M
3300010046\|Ga0126384_11802500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300010047\|Ga0126382_11108055	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300010154\|Ga0127503_10319728	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	618	Open in IMG/M
3300010154\|Ga0127503_11003510	Not Available	739	Open in IMG/M
3300010359\|Ga0126376_10151383	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geomesophilobacter → Geomesophilobacter sediminis	1859	Open in IMG/M
3300010366\|Ga0126379_11178800	Not Available	872	Open in IMG/M
3300011120\|Ga0150983_12553743	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	698	Open in IMG/M
3300012022\|Ga0120191_10004296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1482	Open in IMG/M
3300012159\|Ga0137344_1072566	Not Available	631	Open in IMG/M
3300012200\|Ga0137382_10420136	Not Available	944	Open in IMG/M
3300012200\|Ga0137382_10925051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	628	Open in IMG/M
3300012200\|Ga0137382_11017998	Not Available	594	Open in IMG/M
3300012201\|Ga0137365_10509606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	884	Open in IMG/M
3300012202\|Ga0137363_10038741	All Organisms → cellular organisms → Bacteria	3347	Open in IMG/M
3300012203\|Ga0137399_10350859	Not Available	1225	Open in IMG/M
3300012204\|Ga0137374_11088034	Not Available	570	Open in IMG/M
3300012205\|Ga0137362_10102016	All Organisms → cellular organisms → Bacteria	2417	Open in IMG/M
3300012208\|Ga0137376_10033667	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4091	Open in IMG/M
3300012208\|Ga0137376_10059231	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3154	Open in IMG/M
3300012211\|Ga0137377_10131025	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2396	Open in IMG/M
3300012211\|Ga0137377_10243246	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	1728	Open in IMG/M
3300012212\|Ga0150985_107802297	Not Available	554	Open in IMG/M
3300012212\|Ga0150985_112959306	Not Available	556	Open in IMG/M
3300012212\|Ga0150985_120978198	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1256	Open in IMG/M
3300012358\|Ga0137368_10282059	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1132	Open in IMG/M
3300012361\|Ga0137360_10358741	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300012362\|Ga0137361_10682318	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300012362\|Ga0137361_11029214	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	743	Open in IMG/M
3300012480\|Ga0157346_1013039	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	637	Open in IMG/M
3300012532\|Ga0137373_10456441	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	983	Open in IMG/M
3300012582\|Ga0137358_10015628	All Organisms → cellular organisms → Bacteria	4813	Open in IMG/M
3300012685\|Ga0137397_10055057	All Organisms → cellular organisms → Bacteria	2861	Open in IMG/M
3300012685\|Ga0137397_10140514	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1786	Open in IMG/M
3300012918\|Ga0137396_10922561	Not Available	638	Open in IMG/M
3300012923\|Ga0137359_10119423	Not Available	2338	Open in IMG/M
3300012923\|Ga0137359_10244037	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1603	Open in IMG/M
3300012923\|Ga0137359_10787529	Not Available	824	Open in IMG/M
3300012929\|Ga0137404_10804543	Not Available	854	Open in IMG/M
3300012929\|Ga0137404_12018433	Not Available	538	Open in IMG/M
3300012930\|Ga0137407_10968920	Not Available	805	Open in IMG/M
3300012939\|Ga0162650_100059311	Not Available	638	Open in IMG/M
3300012948\|Ga0126375_10951963	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300012961\|Ga0164302_10549089	Not Available	827	Open in IMG/M
3300012986\|Ga0164304_11399757	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300015264\|Ga0137403_10276472	Not Available	1581	Open in IMG/M
3300015371\|Ga0132258_11352742	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300016319\|Ga0182033_10080441	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2330	Open in IMG/M
3300018052\|Ga0184638_1105675	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300018053\|Ga0184626_10000304	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	14531	Open in IMG/M
3300018072\|Ga0184635_10005671	All Organisms → cellular organisms → Bacteria	4064	Open in IMG/M
3300018072\|Ga0184635_10007798	All Organisms → cellular organisms → Bacteria	3598	Open in IMG/M
3300018072\|Ga0184635_10041670	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300018072\|Ga0184635_10215451	Not Available	764	Open in IMG/M
3300018072\|Ga0184635_10397016	Not Available	522	Open in IMG/M
3300018078\|Ga0184612_10006406	All Organisms → cellular organisms → Bacteria	5904	Open in IMG/M
3300018081\|Ga0184625_10338438	Not Available	783	Open in IMG/M
3300018084\|Ga0184629_10123549	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1291	Open in IMG/M
3300019229\|Ga0180116_1023422	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	676	Open in IMG/M
3300019229\|Ga0180116_1039664	Not Available	1255	Open in IMG/M
3300019233\|Ga0184645_1070769	Not Available	741	Open in IMG/M
3300019257\|Ga0180115_1031880	Not Available	581	Open in IMG/M
3300019257\|Ga0180115_1180267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300019279\|Ga0184642_1663894	Not Available	629	Open in IMG/M
3300019886\|Ga0193727_1156043	Not Available	614	Open in IMG/M
3300021081\|Ga0210379_10201750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	857	Open in IMG/M
3300021951\|Ga0222624_1527256	Not Available	523	Open in IMG/M
3300022195\|Ga0222625_1204792	Not Available	563	Open in IMG/M
3300022534\|Ga0224452_1176752	Not Available	657	Open in IMG/M
3300022756\|Ga0222622_11188256	Not Available	561	Open in IMG/M
3300027056\|Ga0209879_1029359	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	913	Open in IMG/M
3300027163\|Ga0209878_1042300	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582	Open in IMG/M
3300027209\|Ga0209875_1006395	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1403	Open in IMG/M
3300027277\|Ga0209846_1018026	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1164	Open in IMG/M
3300027324\|Ga0209845_1080132	Not Available	504	Open in IMG/M
3300027511\|Ga0209843_1056963	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300027722\|Ga0209819_10090392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pseudosolanacearum	1067	Open in IMG/M
3300027722\|Ga0209819_10293655	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300027722\|Ga0209819_10315821	Not Available	537	Open in IMG/M
3300027743\|Ga0209593_10079380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300027873\|Ga0209814_10000258	All Organisms → cellular organisms → Bacteria	16529	Open in IMG/M
3300027880\|Ga0209481_10420134	Not Available	687	Open in IMG/M
3300027909\|Ga0209382_10235735	Not Available	2083	Open in IMG/M
3300027909\|Ga0209382_10604652	Not Available	1193	Open in IMG/M
3300031093\|Ga0308197_10391073	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300031573\|Ga0310915_10908886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	617	Open in IMG/M
3300031719\|Ga0306917_11221515	Not Available	583	Open in IMG/M
3300031820\|Ga0307473_10445493	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300031941\|Ga0310912_11236743	Not Available	568	Open in IMG/M
3300032076\|Ga0306924_12466116	Not Available	523	Open in IMG/M
3300032174\|Ga0307470_10223784	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1222	Open in IMG/M
3300032180\|Ga0307471_100030063	All Organisms → cellular organisms → Bacteria	4169	Open in IMG/M
3300032180\|Ga0307471_100079657	All Organisms → cellular organisms → Bacteria	2874	Open in IMG/M
3300032205\|Ga0307472_100534492	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1019	Open in IMG/M
3300032205\|Ga0307472_101925944	Not Available	590	Open in IMG/M
3300032261\|Ga0306920_103668203	Not Available	564	Open in IMG/M
3300032261\|Ga0306920_104093669	Not Available	528	Open in IMG/M
3300034115\|Ga0364945_0218697	Not Available	584	Open in IMG/M
3300034149\|Ga0364929_0160376	Not Available	732	Open in IMG/M
3300034417\|Ga0364941_005706	Not Available	2169	Open in IMG/M
3300034643\|Ga0370545_051860	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	800	Open in IMG/M
3300034667\|Ga0314792_035009	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1038	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.80%
Host-Associated	Host-Associated	16.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.04%
Aquatic	Environmental → Aquatic	26.76%
Plants	Host-Associated → Plants	16.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.23%
Freshwater	Environmental → Aquatic → Freshwater	16.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.27%
Sediment	Environmental → Aquatic → Sediment	10.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.52%
Floodplain	Environmental → Terrestrial → Floodplain	2.11%
Roots	Host-Associated → Plants → Roots	1.41%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	14.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.56%
Sand	Environmental → Terrestrial → Soil → Sand	5.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.82%
Loam	Environmental → Terrestrial → Soil → Loam	2.11%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.11%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.41%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.41%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.99%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	14.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.63%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.82%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.11%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.41%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.41%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.70%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.27%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	8.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.04%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	6.34%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.52%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.11%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.11%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.11%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.41%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.41%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.41%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.41%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.70%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012480	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_16834980	2124908045	Soil	MEPKPFRLHKTEGANNHVKQSDAFIFARNPIGVTYNQFPAMLTSVIHD
FD1_07827980	2170459024	Grass Soil	MKVKPFCLHKTEGANNHIEQGNALIFARNPIGVTYDQLAAMLTSVIHDF
JGI1027J12803_1033569452	3300000955	Soil	MKVKPFCLHKTEGANNNIKQGDACFFACNPIGVTYNQ
JGI24808J26613_10058981	3300002099	Soil	MEPKSFRLRKTEGANNHIKQGDTFFFARHPIGVTYDQFPAM
JGIcombinedJ43975_100998482	3300002899	Soil	MKPFCLFKTGGANNHIEQGDALVFARYPVGVTYDQLAAMLTRVIH
Ga0066395_106799061	3300004633	Tropical Forest Soil	MKAKAFRFHKTERANNHIKQGYPLFFAHHPIGVTNDRLPTMLTNPIHELRVG
Ga0065705_105630622	3300005294	Switchgrass Rhizosphere	MLARNIDCLRMKVKPFCLHETEGANNHIEQGDAFFFARDPIGVTYNQLATMLTGVIHDFLHWQTRCHIGPVY*
Ga0065705_110986821	3300005294	Switchgrass Rhizosphere	MFASNVDLLRMEPKPFRLHKTEGANNHIEQGDALVFARHPIGVTYNQLTAMLTSVIHDCLHWQARCHIGLIY*
Ga0066700_105493941	3300005559	Soil	VEPKSFGFHKTEGANDHIKQSDAFFFARNPVGVTDNQFTAMLTNMIHVLP
Ga0066703_101594972	3300005568	Soil	MEPKPFRLHKTEGANNHVKQADAFIFARNPISVTYNQLTAMLTDVIHDFLHWQGRGHIGLIY*
Ga0081538_100193038	3300005981	Tabebuia Heterophylla Rhizosphere	MKVKPFRLHKTERANNHIEQGNALIFARHPIGVTYNQLAAMLTGVIHIFLDGQGKCHIRLI*
Ga0081538_102510682	3300005981	Tabebuia Heterophylla Rhizosphere	MEPKPLGFHRTDGTNDKIKQRNALIFARHPIRVTDNQLSTM
Ga0070716_1001703494	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VEPKSFGFHKTEGANDHIKQSDAFFFARNPVGVTDNQFTAMLTNMIHILP*
Ga0066659_112074722	3300006797	Soil	MEPKPFRFHKTEGANNHIKQGDTFFFARNPIGVTYNQLAAMLTNTVHKFP*
Ga0066659_115574782	3300006797	Soil	MEPKPFCLHKTKGANNHIQQSDTFIFARNPIGVTYNQFPAMLTNVIHIFPCGKEHAI*
Ga0075433_111223121	3300006852	Populus Rhizosphere	MEPKPFGFHKTEGANNHVKQSDAFFFARNPIGVTYNQLPAMLTNTVH
Ga0075433_113605451	3300006852	Populus Rhizosphere	VPPSVSSRRVLASNVDFLRMEPKSFRLHRTEGANNHIKQGDTIFFARNPVRFTYNQLPAMLTNTIHK
Ga0075425_1027733582	3300006854	Populus Rhizosphere	MKVKSLCLHKTEVANNHIEQGDALVFARYPVGVTYDQLAAMLTRMIHDFLS
Ga0075429_1014591652	3300006880	Populus Rhizosphere	MFASIVDFLRMEPQPFGFHKTEGANNHVKQSDAFFFARNPIGVTYNQLPAMLT
Ga0075429_1019367062	3300006880	Populus Rhizosphere	MEPKPFRRHKTEVANNHIKQRNAFIFARNPIDATYNQLPAMLTRTFHNSPLKK
Ga0075424_1027850812	3300006904	Populus Rhizosphere	MEAKPFRLHKTERANNHVKQSDAFIFARNPIGVTYNRFPAMLTSVIHDFVYW
Ga0075436_1000387101	3300006914	Populus Rhizosphere	KTEGANNHVKQSDAFIFARNPIGVTYNQFPAMLTSVIHDFVYWQGRCHPGLIY*
Ga0075435_1004077662	3300007076	Populus Rhizosphere	MEPKPFGFHKTEGANNHVKQSDAFFFARNPIGVTYNQVPAMLTNTVHNSP*
Ga0111539_108002282	3300009094	Populus Rhizosphere	MEPKPFRRHKTEEANNHFKQRNAFIFARNPIDATYNQLPAMLTRTFHNSPLKK*
Ga0075418_102493161	3300009100	Populus Rhizosphere	SASDIDFLRMEPKPFRLHKTEGANNHVKQSDAFIFARNPIGVTYNQFPAMLTSVIHDFVYWQGRCHPGRIY*
Ga0066709_1007845131	3300009137	Grasslands Soil	MEPKPLRFHKTEGANNHIEQGDALIFARHPIGVPYNQLAAMLTNVIHIV
Ga0066709_1015356603	3300009137	Grasslands Soil	MEPKPFRLHKTEGANNHVKQADACFFARNPIGVTYDQLAAMLTSVIHDFVYAQERCHIGLLY*
Ga0114129_121803811	3300009147	Populus Rhizosphere	MKVKSLCLHKTEVANNHIEQGDALVFARYPVGVTYDQLAAMLTR
Ga0111538_111460641	3300009156	Populus Rhizosphere	MEPKPFRLHKTEGANDHVKQSDAFIFARNPIGVTYNRFPAMLTSVIHGFL
Ga0105092_100817881	3300009157	Freshwater Sediment	MKPKPLGFHRTEGANDKIEQGNTLIFARHPIGVTDNQLSAMLTHAIHVSLTRNERAVSE*
Ga0105092_100898773	3300009157	Freshwater Sediment	MEPKPFRRHKTEGANDEIEQSNALIFARHSIGVADNQLSAMLTILVHVFPDSKNLLN*
Ga0105092_102600281	3300009157	Freshwater Sediment	MEPKSLGFHRTKGANNKIEHGDAFLLARHPIGVTYNQLTAMLTGAIHTFSLTRKEHAVFGLT*
Ga0105092_104008311	3300009157	Freshwater Sediment	MKVKPFCRDKTEGANNHVKQADAFFFARNPIGVTYNQLTAMLTDAIHTFSLLPPLAC*
Ga0105092_107065662	3300009157	Freshwater Sediment	MKPKSLGFHRTEGANNHIEQGNALIFARHPIGVTYNQLVAMLTDVIHSSLTGKEHAILD*
Ga0105092_108660271	3300009157	Freshwater Sediment	MEPKPLCLHKTEGANNHIEQGDAFLFARHPIGVTYNQFPAMLTDVIHNFPERQGTWHIRSIYQCTVGR
Ga0105104_104072872	3300009168	Freshwater Sediment	MKVKPFRRDKTEGANNHIKEANAFIFARDPIGVTYNQLAAMLTILFHIFP*
Ga0105340_10033864	3300009610	Soil	MEPKPLGFHKTVGANNHIQQSDAFFSARNPIGVSYDQLPTMLTDRIHCSL*
Ga0105340_13747211	3300009610	Soil	MFASNVDLLRMEPKPFRLHKTEGANNHIEQGDALVFARHPIGVTYHQLAAMLTSVIHDFLHWQTRCHIGLIY*
Ga0105082_10960631	3300009814	Groundwater Sand	MEPKSFGFHKTEGANNHIKQGDAFFFARNPIGVTYNRLPAMLTNVIHIFP*
Ga0105072_10015751	3300009818	Groundwater Sand	MEPKSFGFHKTEGANNHIKQGDAFFFARNPIGVTYN
Ga0126384_118025002	3300010046	Tropical Forest Soil	MKVKPFCLHKTDGANNHIEQGNALIFARNPIGVTYDQLPAMLTSVIH
Ga0126382_111080551	3300010047	Tropical Forest Soil	MKAKAFRFHKTEGANNHIEQSDPLFFAHHPIGVTNDRLPAMLTNPIHNL
Ga0127503_103197281	3300010154	Soil	PKSFGFHKTEGANDHIKQSDAFFFARNPVGVTDNQFTAMLTSMIHIFP*
Ga0127503_110035101	3300010154	Soil	MEFLCMEPKPLRFHKTEGANNHIQQSDTFFFARNPIGVSYEQLPSML
Ga0126376_101513834	3300010359	Tropical Forest Soil	FHRMEPKPFRRHKTQGANNHIEQPNAFIFARNPIGATYNPLPAMLTKTFITIL*
Ga0126379_111788001	3300010366	Tropical Forest Soil	MKVKPFCLHKTEGANNHIEQGNALIFARNPIGVTYDQLAAMLTSVIHDFFHWQTRCHIDLIVTNLGLVNP*
Ga0150983_125537432	3300011120	Forest Soil	VKPKSFGFHKTEGANDHIKQSDAFFFARNPVGVTDNQFTAMLTNMIH
Ga0120191_100042962	3300012022	Terrestrial	MQPKPLGFQSTEGANNQIEQGNALIFARHPIGVTDNQLSAMLTSAIHIPA*
Ga0137344_10725662	3300012159	Soil	MEAKPFRFHKTERANNHIKQGDTLLFAHNPIGVTYNRLPAMLTNAIHVSLERQGTCHMLTICPKG
Ga0137382_104201362	3300012200	Vadose Zone Soil	VKPFCLDKTEGANNHVKQMDTFIFARNPIGVTYNRLAAMFTSVIHDFLHWQGRCHIGLIY
Ga0137382_109250511	3300012200	Vadose Zone Soil	HKTEGANNHIEQGDALIFARHPIGVPYNQLAAMLTNVIHIVLWGKEHAICI*
Ga0137382_110179981	3300012200	Vadose Zone Soil	MEPKPFRFHKTEGANNHIKQGDAFFFARNPIGVKYNQFRAMLTKKIHISLEGQGTCHIRLI*
Ga0137365_105096062	3300012201	Vadose Zone Soil	MEPKPFRLHKTEGANNHVKQSDAFIFARNPIGVTYNR
Ga0137363_100387415	3300012202	Vadose Zone Soil	MKPKPFRLHKTEGANNHVKQADAFIFARNPIGVTYNQLTAMLTDVIHDFLYWQGRGHIGLIY*
Ga0137399_103508592	3300012203	Vadose Zone Soil	MEPKPFCLHKTKGANNHIQQSDTFIFARNPIGVTYNQFPAMLTNVIHIFPCGK
Ga0137374_110880342	3300012204	Vadose Zone Soil	HKTEGANNHVKQSDTFIFARNPIGVTYNRLAAMFTSVIHDFLHWQGRCHIGLIY*
Ga0137362_101020163	3300012205	Vadose Zone Soil	MKPKPFRLHKTEGANNHVKQADAFILARNPIGVTYNQLTAMLTDVIHDFLHWQGRGHIGLIY*
Ga0137376_100336672	3300012208	Vadose Zone Soil	MEPKPLRFHKTEGANNHIEQGDALIFARHPIGVPYNQLAAMLTNVIHIVFWGKEHAICI*
Ga0137376_100592311	3300012208	Vadose Zone Soil	MFASNVDLLRMEPKPFCLHKTEGANNHIKQGDAFFFARNPIGVTYNQFRAMLTKKIHIFL
Ga0137377_101310252	3300012211	Vadose Zone Soil	MEPKPLRFHKTEGANNHIEQGDALIFARHPIGVPYNQLAAMLTNVIHIVFWGKEHATCI*
Ga0137377_102432463	3300012211	Vadose Zone Soil	PNVDFLRMKVKPFCLHKTEGANNHIEQGNALIFARHPVSVTYNQLSAMLTIVFHIFP*
Ga0150985_1078022971	3300012212	Avena Fatua Rhizosphere	MEPKPFCLHKTEGANNHIKQGDAFFFARNPIGVTYNQLPAMLT
Ga0150985_1129593061	3300012212	Avena Fatua Rhizosphere	MEPKPLRFHKTEGANNHIEQGDALIFARHPIGVPYNQLAAMLTNVIHIVFR
Ga0150985_1209781982	3300012212	Avena Fatua Rhizosphere	MEPKPFRFHKTEGANNHIKQGDTFFFARNPIGVTYNQLPAMLTNTVHKF
Ga0137368_102820593	3300012358	Vadose Zone Soil	MEPKPFRLHKTEGANNHVKQSDAFIFARNPIGVTYNRLAAMFT
Ga0137360_103587412	3300012361	Vadose Zone Soil	MVTPPVSSCSLFASDIDLLRMEPKPFRLHKTEGANNHVKQADAFIFARNPIGVTYNQLTAMLTDVIHDFLYWQGRGHIGLIY*
Ga0137361_106823181	3300012362	Vadose Zone Soil	MEPKPFRLHKTERANNHVKQADAFIFARNPIGVTYNQLTAMLTDVIHDFLHWQGRGHIGLIY*
Ga0137361_110292141	3300012362	Vadose Zone Soil	MKPKPFRLHKTEGANNHVKQADAFIFARNPIGVTYNQLTAMLTDVIHDFL
Ga0157346_10130392	3300012480	Arabidopsis Rhizosphere	MEPKPFRLHKTEGANNHIKQGDAFFFARNPIGVTDNQFVAMLTSVIHDFLHWQAKCQIRL
Ga0137373_104564412	3300012532	Vadose Zone Soil	ASDIDFLRMEPKPFRLHKTEGANNHVKQSDAFIFARNPIGVTYNRFPAMLTSVIHGFLDWQGRCHIGLNY*
Ga0137358_100156284	3300012582	Vadose Zone Soil	MKPKPFRLHKTEGANNHVKQADAFIFARNPIGVTYNQLTAMLTDVIHDFLHWQGRGHIGLIY*
Ga0137397_100550572	3300012685	Vadose Zone Soil	MEPKPLRFHKTEGANNHIKQGDALLFARHPIGVTDNQLAAMLTNVIHIFFRGKEHAI*
Ga0137397_101405143	3300012685	Vadose Zone Soil	MEPKPFCLHETEGANNHIKQGDAFFYARNPIGVTYNQFRAMLTNKIHIFL*
Ga0137396_109225613	3300012918	Vadose Zone Soil	MEPKPFRLHKTEGANNHVKQRDTFIFARNPIGVTYNQLPAMLTSVIH
Ga0137359_101194232	3300012923	Vadose Zone Soil	MEPKPFCLHKTEGANNHIQQSDTFIFARNPIGVTYNQFPAMLTNVIHIFPCGKEHAI*
Ga0137359_102440374	3300012923	Vadose Zone Soil	VEPKSFGFHKTEGANDHIKQSDAFFFARNPVGVTDNQFTAMLTNMIHVLP*
Ga0137359_107875291	3300012923	Vadose Zone Soil	MAPKPFRFHMPEGANNHIKQSDTFIFARNPIGVTYNQRSAMLTSIIHNLPLTARSMPYRM
Ga0137404_108045432	3300012929	Vadose Zone Soil	MKVKPFCLHETERANNHIEQGNALIFARHPIGVTYNRLLAMLTSVIHDFLHGKEDAIPD*
Ga0137404_120184331	3300012929	Vadose Zone Soil	MEPKPFRIHKTERANNHVKQSDAFIFARNPIGVTYNRFPAMLTSVIHDYL*
Ga0137407_109689201	3300012930	Vadose Zone Soil	MEPKPFRLHKTEGANNHVKQADACFFARNPIGVTYDQLAAMLTSVIHDFLYAQERCHIGLLY*
Ga0162650_1000593111	3300012939	Soil	MFASNIDFLRMEPKPFRLHKTEGANNHVKQADACFFARNPIGVTYDQLAAMLTSVIHGFLYAQERFHIGLFY*
Ga0126375_109519632	3300012948	Tropical Forest Soil	MKAKAFRFHETKRANNHIKQGDTLFFAHYSIGVTNDRLPAMLTNAIHNPWLRAKN
Ga0164302_105490891	3300012961	Soil	MKVKPFGLHKTEGANNHVKQADAFFFARNPIGLTDNQLTAMLTVAIHSFRILPPLAC*
Ga0164304_113997571	3300012986	Soil	MEPKPFCLLNTEGANNHIEQNDAFFFARNPIAVTYNELLAMLT
Ga0137403_102764726	3300015264	Vadose Zone Soil	MEPKPFRLHKTEGANNHVKQADACFFARNPIGVTYNRLAAMFTSVIHDFL
Ga0132258_113527425	3300015371	Arabidopsis Rhizosphere	MKVKSLSLHETEGANNHIEQGDALVFARNPIGVTYNQLAAMLT
Ga0182033_100804413	3300016319	Soil	MEPKSFGFHKTKGTNDHIKQSNAFFFARNPIGVTYDQFPAMLTSIIHIFP
Ga0184638_11056752	3300018052	Groundwater Sediment	MFASNIDFLRMEPKPFGFHKTEGANNHIEQGDAFFFARNPIGVSYDQLPTMLTDRIHTSL
Ga0184626_100003043	3300018053	Groundwater Sediment	MEPKPLGFHKTEGANNHIEQGDAFVFARHPIGVTYNQLPAMLTNVIHIFL
Ga0184635_100056711	3300018072	Groundwater Sediment	MKVKPFCLHKTEGANNHIEQGNALIFARHPISVTYNHFPAMLTIMFHIFP
Ga0184635_100077984	3300018072	Groundwater Sediment	MEPKPLGFHKTVGANNHIQQSDAFFFARNPIGVSYDQLPTMLTDRIHCSL
Ga0184635_100416701	3300018072	Groundwater Sediment	TEGANNHIEQGNALIFARHPISVTYNHFPAMLTIMFHIFP
Ga0184635_102154511	3300018072	Groundwater Sediment	MKVKPFCLHKTEGANNHIEQGDALIFARHPIGVTYNQLPAMLTNVIHDFLHGKEDAIPN
Ga0184635_103970161	3300018072	Groundwater Sediment	LPPKTEGANNNIKQGYACFFARNPIGVTYNQVTAMFTDPIHTFSHIA
Ga0184612_100064065	3300018078	Groundwater Sediment	MEPKPLGFHKTEGANNHIQQSDAFFFARNPIGVSYDQLPTMLTDRIHTSL
Ga0184625_103384381	3300018081	Groundwater Sediment	VEPKPLCLHKTEGANNHVKQPDAFFFARNPIGVTANPFTAMLTDAIHT
Ga0184629_101235491	3300018084	Groundwater Sediment	LFAPKIDFLRMKVKPFCLHKTERANNHIEQGNALIFARHPIGVTYNQLPAMLTNVIHDFLHGKEDAIPN
Ga0180116_10234221	3300019229	Groundwater Sediment	MEPKPFRLHKTEGANNHIKQSDTFFFARNPIGVTYNQLPAML
Ga0180116_10396641	3300019229	Groundwater Sediment	MEPKPLGFHKTEGANNHIQQSDAFFFARNPIGVSYDQLPTMLTD
Ga0184645_10707691	3300019233	Groundwater Sediment	MEPKPLGFHKTEGANNHIQQSDAFFFARNPIGVTANPFTAMLTDAIHTFSHVASF
Ga0180115_10318802	3300019257	Groundwater Sediment	MEPKPLGFHKTEGANNHIQQSDAFFFARNPIGVSYDQLPTMLT
Ga0180115_11802671	3300019257	Groundwater Sediment	MEPKPFRLHKTEGANNHIKQSDTFFFARNPIGVTYNQLPAMLTNMVHKF
Ga0184642_16638941	3300019279	Groundwater Sediment	MEVKPFRFHKTERANNHIKQGDTLLFAHNPIGVTYNRLPAMLT
Ga0193727_11560431	3300019886	Soil	MKVKPFCLHKTERANNHIEQGNALIFARHPIGVTYNQLPAMLTNVIHDFLHGKEDAIPD
Ga0210379_102017501	3300021081	Groundwater Sediment	MKPKSFGFHKTERANNHIKQGDTFFFARNPIGVTYNQLPAMLTNTVHKFQWG
Ga0222624_15272561	3300021951	Groundwater Sediment	MEVKPFRFHKTERANNHIKQGDTLLFAHNPIGVTNNRLPAMLTN
Ga0222625_12047921	3300022195	Groundwater Sediment	MKPKPFGFPKTEGANNHIKQGDTFFFARNPIGVTYNQLPAMLTNTVHKFQ
Ga0224452_11767521	3300022534	Groundwater Sediment	MKVKPFCLHKTERANNHIEQGNALIFARHPIGVTYNQLPAMLTNVIHDFLHGKEDAIPN
Ga0222622_111882561	3300022756	Groundwater Sediment	MEPKSFRLHGTEGANNHIKQGDTVFFARNSIGVTDNR
Ga0209879_10293591	3300027056	Groundwater Sand	MEPKPLRFHKTEGANNHVEQGDTFVFARHPIGVTYNQLPAMFTNV
Ga0209878_10423002	3300027163	Groundwater Sand	MKVKPFCLHKTERANNHVEQGNALIFARNPIGVTYNHLAAMLTSVIHDFLQGQER
Ga0209875_10063951	3300027209	Groundwater Sand	MEPKPLRFHKTEGANNHVEQGDAFVFARHPIGVTYNQLPAMFTNVIHIFFGGKEHAICI
Ga0209846_10180263	3300027277	Groundwater Sand	MEPKPLRFHKTEGANNHVEQGDAFVFARHPIGVTYNQLPAMFTNVIHTFFGGKEHAICI
Ga0209845_10801321	3300027324	Groundwater Sand	MEPKPLGFHKTEGANNHVEQGDAFVFARHPIGVTYNRLPAMLTNVIHIFP
Ga0209843_10569631	3300027511	Groundwater Sand	MEPKPLRFHKTEGANNHVEQGDTFVFARHPIGITYNQ
Ga0209819_100903922	3300027722	Freshwater Sediment	MEPKPFRLHKTEGANNHIKEGNSIFFARNPIGITYNRLPAMLTNAIHTFFQRARNVPC
Ga0209819_101240581	3300027722	Freshwater Sediment	MKPKPLGFHRTEGANDKIEQGNTLIFARHPIGVTDNQLSAMLTHAIHVSLTRNERAVSE
Ga0209819_102936551	3300027722	Freshwater Sediment	MEPKSFRLHKTEGANNHVKQGDTFFFARHPIGITYDQFPAM
Ga0209819_103158212	3300027722	Freshwater Sediment	MEPKPFRLHKTERANNHIKQGDAFFFACNPIGVTYNQLPAMLTSVIHDFSSLASKMPY
Ga0209593_100793801	3300027743	Freshwater Sediment	MEPKPFRRHKTEGANNHIKQPNAFIFARNPIGATYNQLPAM
Ga0209814_100002581	3300027873	Populus Rhizosphere	MEPKPFRLHKTEGANNHVKQSDAFIFARNPIGVTYNQFPAMLTSVIHDFVYWQGRCHPG
Ga0209481_104201341	3300027880	Populus Rhizosphere	MEPKPFRLHKTEGANNHVKQSDAFIFARNPIGVTYNQFPAMLTSVIHDFFYWQGRCH
Ga0209382_102357351	3300027909	Populus Rhizosphere	KTEGANNHVKQSDAFIFARNPIGVTYNRFPAMLTSVIHGFLHWQGRCHIGLIY
Ga0209382_106046522	3300027909	Populus Rhizosphere	MEPKPFRRHKTEGANNHIKQPNAFIFARNPIGATYNQLPAMSTRTFHNSPFKKNDIQYQE
Ga0308197_103910731	3300031093	Soil	VFAPNVDLLRMKPKSFGFHKTERANNHIKQGDTFFFARNPIGVTYNQLPAMLTDT
Ga0310915_109088862	3300031573	Soil	MEPKSFGFHKTEGTNDHIKQSDAFFFARNPIGITYDQFPAMLTSIIHIFP
Ga0306917_112215151	3300031719	Soil	MEPKSFGFHKTEGTNDHIKQSDAFFFARNPIGITYDQFPAMLTSLLHIFHSTGKEYAIAD
Ga0307473_104454932	3300031820	Hardwood Forest Soil	MEPKPFRLHKTEGANNHVKQADAFIFACNPIGVTYNQLTAMLTDVIHDFLHWQGRGHIGLIY
Ga0310912_112367432	3300031941	Soil	MEPKSFGFHKTKGTNDHIKQSNAFFFARNPIGVTYDQFPAMLTSIIHIFQSTGKE
Ga0306924_124661161	3300032076	Soil	MKVKPFCLHKTEGANNHVKQGDAFFFARNPIGVTYNQLTAMLTDAIHTFLDRQGTCHMILLI
Ga0307470_102237842	3300032174	Hardwood Forest Soil	MEPKPFRLHKTEGANNHVKQADAFIFARNPIGVTYNQLTAMLTAVIHDFLHWQGRGHIGLIY
Ga0307471_1000300631	3300032180	Hardwood Forest Soil	MEPKPFCLHKTEGANNHIQQSDTFIFARNPIGVTYNQFPAMLTNVIHIFPGGKEHAI
Ga0307471_1000796575	3300032180	Hardwood Forest Soil	MEPKPFRLHKTEGANNHVKQADAFIFARNPIGVTYNQLTAMLTDVIHDFLHWQGRGHIGLIY
Ga0307472_1005344921	3300032205	Hardwood Forest Soil	VEPKSFGFHKTEGANDHIKQSDAFFFARNPVGVADNQFTAMLTNMIHILP
Ga0307472_1019259443	3300032205	Hardwood Forest Soil	MKVKPFGLHKTEGANNHVKQADAFFFARNPIGLTDNQLTAMLTDAIHSFSHIAS
Ga0306920_1036682032	3300032261	Soil	MEPKSFGFHKTEGTNDHIKQSDAFFFARNPVGITYDQFPAMLTSLLHIFHSTGKEY
Ga0306920_1040936692	3300032261	Soil	MKVKPFCLDKAEGANNHVQQADAFFFARNPIGITYNQLTAMLTDAIRTF
Ga0364945_0218697_22_186	3300034115	Sediment	MEFLCMEPKPLGFHKTEGANNHIQQSDAFFFARNPIGVTYDQLPTMLTDRIHSR
Ga0364929_0160376_303_476	3300034149	Sediment	VEPKPLCLHKTEGANNHVKQPDAFFFARNPIGVTANPFTAMLTDAIHTVSHIASFGM
Ga0364941_005706_2_178	3300034417	Sediment	MKVKPFRLHKTEGANNHIKQGDAFFFARNPIGVTYNQLAAMLTSVIHDVFTGKEDAMSE
Ga0370545_051860_651_800	3300034643	Soil	MEPKPFRLHKTEGANNHIKQSDTFFFARNPIGVTYNQLPAMLTNMVHKFP
Ga0314792_035009_2_133	3300034667	Soil	MEPKPFRLHKTEGANNHIKQGDTLVFACNPIGVADNRLPAMLTI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052821

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences