Metagenome / Metatranscriptome Family F052805

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052805
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	74 residues
Representative Sequence	MTRHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDAAGQ
Number of Associated Samples	107
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.31 %
% of genes near scaffold ends (potentially truncated)	36.62 %
% of genes from short scaffolds (< 2000 bps)	83.10 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.845 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.493 % of family members)
Environment Ontology (ENVO)	Unclassified (25.352 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.479 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.49% β-sheet: 11.22% Coil/Unstructured: 64.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF01139	RtcB	16.20
PF07022	Phage_CI_repr	15.49
PF14279	HNH_5	12.68
PF01734	Patatin	1.41
PF01844	HNH	1.41
PF05726	Pirin_C	0.70
PF13088	BNR_2	0.70
PF01381	HTH_3	0.70
PF03631	Virul_fac_BrkB	0.70
PF14827	dCache_3	0.70
PF02678	Pirin	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	16.20
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	1.41
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.41
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.41
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.41
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.85 %
Unclassified	root	N/A	9.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.85 %
Unclassified	root	N/A	9.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.85 %
Unclassified	root	N/A	9.15 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	90.14 %
Unclassified	root	N/A	9.15 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	74.65 %
Unclassified	root	N/A	9.15 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.15 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	7.04 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.15 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.04 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10146407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1204	Open in IMG/M
3300005175\|Ga0066673_10508702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	709	Open in IMG/M
3300005176\|Ga0066679_10753739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	626	Open in IMG/M
3300005179\|Ga0066684_10037024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2710	Open in IMG/M
3300005181\|Ga0066678_10168221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1382	Open in IMG/M
3300005406\|Ga0070703_10534169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	532	Open in IMG/M
3300005446\|Ga0066686_10642327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	721	Open in IMG/M
3300005446\|Ga0066686_11069196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	520	Open in IMG/M
3300005446\|Ga0066686_11073171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	519	Open in IMG/M
3300005467\|Ga0070706_100016982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6722	Open in IMG/M
3300005467\|Ga0070706_100104382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2636	Open in IMG/M
3300005467\|Ga0070706_101147604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	715	Open in IMG/M
3300005467\|Ga0070706_101836874	Not Available	550	Open in IMG/M
3300005468\|Ga0070707_100304989	Not Available	1547	Open in IMG/M
3300005468\|Ga0070707_101240043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	712	Open in IMG/M
3300005468\|Ga0070707_101918786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	560	Open in IMG/M
3300005471\|Ga0070698_100574807	Not Available	1067	Open in IMG/M
3300005518\|Ga0070699_101023329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	758	Open in IMG/M
3300005536\|Ga0070697_100297721	Not Available	1386	Open in IMG/M
3300005540\|Ga0066697_10441578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	750	Open in IMG/M
3300005542\|Ga0070732_10214751	Not Available	1150	Open in IMG/M
3300005545\|Ga0070695_100304726	Not Available	1179	Open in IMG/M
3300005559\|Ga0066700_11032222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	540	Open in IMG/M
3300005574\|Ga0066694_10260507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	822	Open in IMG/M
3300005574\|Ga0066694_10560132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	532	Open in IMG/M
3300005575\|Ga0066702_10458222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	780	Open in IMG/M
3300005764\|Ga0066903_100463928	All Organisms → cellular organisms → Bacteria → Proteobacteria	2125	Open in IMG/M
3300006173\|Ga0070716_100676424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	786	Open in IMG/M
3300006755\|Ga0079222_10002560	All Organisms → cellular organisms → Bacteria → Proteobacteria	5541	Open in IMG/M
3300006791\|Ga0066653_10637791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	544	Open in IMG/M
3300006794\|Ga0066658_10159771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1153	Open in IMG/M
3300006796\|Ga0066665_10170340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1668	Open in IMG/M
3300006852\|Ga0075433_10031355	All Organisms → cellular organisms → Bacteria	4544	Open in IMG/M
3300009012\|Ga0066710_100007340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	10509	Open in IMG/M
3300009012\|Ga0066710_100546216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1752	Open in IMG/M
3300009012\|Ga0066710_102574943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	733	Open in IMG/M
3300009012\|Ga0066710_102706192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	707	Open in IMG/M
3300009090\|Ga0099827_11183117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	664	Open in IMG/M
3300009137\|Ga0066709_101269975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1081	Open in IMG/M
3300009137\|Ga0066709_102827922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	643	Open in IMG/M
3300009137\|Ga0066709_104023758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	534	Open in IMG/M
3300010301\|Ga0134070_10199603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	733	Open in IMG/M
3300010304\|Ga0134088_10722210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	501	Open in IMG/M
3300010333\|Ga0134080_10320264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	700	Open in IMG/M
3300010333\|Ga0134080_10684278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	507	Open in IMG/M
3300010337\|Ga0134062_10663399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	544	Open in IMG/M
3300010364\|Ga0134066_10262361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	603	Open in IMG/M
3300010366\|Ga0126379_10368364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1474	Open in IMG/M
3300010376\|Ga0126381_100417543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1873	Open in IMG/M
3300010398\|Ga0126383_11804582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	700	Open in IMG/M
3300010880\|Ga0126350_10316118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	873	Open in IMG/M
3300012198\|Ga0137364_10068679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2418	Open in IMG/M
3300012199\|Ga0137383_10210903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1423	Open in IMG/M
3300012201\|Ga0137365_11001113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	606	Open in IMG/M
3300012201\|Ga0137365_11240906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	531	Open in IMG/M
3300012205\|Ga0137362_11178252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	650	Open in IMG/M
3300012206\|Ga0137380_10398794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1222	Open in IMG/M
3300012206\|Ga0137380_11428269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	577	Open in IMG/M
3300012207\|Ga0137381_10234413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1593	Open in IMG/M
3300012209\|Ga0137379_10169403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2096	Open in IMG/M
3300012209\|Ga0137379_10277801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1586	Open in IMG/M
3300012210\|Ga0137378_10813110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	847	Open in IMG/M
3300012211\|Ga0137377_10108202	All Organisms → cellular organisms → Bacteria → Proteobacteria	2639	Open in IMG/M
3300012349\|Ga0137387_10359817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1054	Open in IMG/M
3300012350\|Ga0137372_10167442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1782	Open in IMG/M
3300012350\|Ga0137372_10320940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1194	Open in IMG/M
3300012351\|Ga0137386_10122928	All Organisms → cellular organisms → Bacteria → Proteobacteria	1847	Open in IMG/M
3300012351\|Ga0137386_10402686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	985	Open in IMG/M
3300012354\|Ga0137366_10161554	Not Available	1683	Open in IMG/M
3300012354\|Ga0137366_10616488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	777	Open in IMG/M
3300012356\|Ga0137371_10096053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2306	Open in IMG/M
3300012532\|Ga0137373_10219009	Not Available	1555	Open in IMG/M
3300015371\|Ga0132258_11970730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1470	Open in IMG/M
3300016445\|Ga0182038_12078404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	515	Open in IMG/M
3300017930\|Ga0187825_10210783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	702	Open in IMG/M
3300017936\|Ga0187821_10384240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	572	Open in IMG/M
3300017959\|Ga0187779_10008626	All Organisms → cellular organisms → Bacteria → Proteobacteria	5883	Open in IMG/M
3300017959\|Ga0187779_10157497	All Organisms → cellular organisms → Bacteria → Proteobacteria	1403	Open in IMG/M
3300017959\|Ga0187779_10601088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	736	Open in IMG/M
3300017961\|Ga0187778_10279039	All Organisms → cellular organisms → Bacteria → Proteobacteria	1078	Open in IMG/M
3300017961\|Ga0187778_10485787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	819	Open in IMG/M
3300017973\|Ga0187780_10395322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	980	Open in IMG/M
3300017999\|Ga0187767_10099505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	806	Open in IMG/M
3300018056\|Ga0184623_10110655	Not Available	1270	Open in IMG/M
3300018056\|Ga0184623_10111594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1265	Open in IMG/M
3300018058\|Ga0187766_10782156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	665	Open in IMG/M
3300018060\|Ga0187765_10014073	All Organisms → cellular organisms → Bacteria → Proteobacteria	3683	Open in IMG/M
3300018060\|Ga0187765_10091992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1638	Open in IMG/M
3300018060\|Ga0187765_10120458	All Organisms → cellular organisms → Bacteria → Proteobacteria	1452	Open in IMG/M
3300018075\|Ga0184632_10234109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	805	Open in IMG/M
3300018078\|Ga0184612_10119424	Not Available	1380	Open in IMG/M
3300018084\|Ga0184629_10721261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	501	Open in IMG/M
3300018431\|Ga0066655_10466338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	834	Open in IMG/M
3300018433\|Ga0066667_10544685	Not Available	962	Open in IMG/M
3300021081\|Ga0210379_10390311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	614	Open in IMG/M
3300021432\|Ga0210384_10064340	All Organisms → cellular organisms → Bacteria → Proteobacteria	3309	Open in IMG/M
3300021432\|Ga0210384_10328556	All Organisms → cellular organisms → Bacteria → Proteobacteria	1377	Open in IMG/M
3300021478\|Ga0210402_10011351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7694	Open in IMG/M
3300021478\|Ga0210402_10406908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1263	Open in IMG/M
3300021560\|Ga0126371_11456104	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300022534\|Ga0224452_1010010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2459	Open in IMG/M
3300025910\|Ga0207684_10165609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1904	Open in IMG/M
3300025910\|Ga0207684_10275235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1452	Open in IMG/M
3300025910\|Ga0207684_10946242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	723	Open in IMG/M
3300025939\|Ga0207665_10272560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1257	Open in IMG/M
3300026320\|Ga0209131_1236161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	774	Open in IMG/M
3300026323\|Ga0209472_1080384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1327	Open in IMG/M
3300026331\|Ga0209267_1292682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	543	Open in IMG/M
3300026497\|Ga0257164_1052217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	658	Open in IMG/M
3300026538\|Ga0209056_10410278	Not Available	821	Open in IMG/M
3300026552\|Ga0209577_10857853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	509	Open in IMG/M
3300027576\|Ga0209003_1015263	All Organisms → cellular organisms → Bacteria → Proteobacteria	1199	Open in IMG/M
3300027725\|Ga0209178_1000495	All Organisms → cellular organisms → Bacteria → Proteobacteria	11582	Open in IMG/M
3300027748\|Ga0209689_1099286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1506	Open in IMG/M
3300027842\|Ga0209580_10519635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	592	Open in IMG/M
3300031231\|Ga0170824_106882435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	522	Open in IMG/M
3300031543\|Ga0318516_10093091	All Organisms → cellular organisms → Bacteria → Proteobacteria	1695	Open in IMG/M
3300031680\|Ga0318574_10841056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	537	Open in IMG/M
3300031720\|Ga0307469_10066833	Not Available	2359	Open in IMG/M
3300031720\|Ga0307469_10173689	All Organisms → cellular organisms → Bacteria → Proteobacteria	1647	Open in IMG/M
3300031723\|Ga0318493_10776438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	539	Open in IMG/M
3300031740\|Ga0307468_100574585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	914	Open in IMG/M
3300031740\|Ga0307468_100673773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	859	Open in IMG/M
3300031782\|Ga0318552_10009083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4090	Open in IMG/M
3300031820\|Ga0307473_10399172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	900	Open in IMG/M
3300031820\|Ga0307473_10916262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	634	Open in IMG/M
3300032068\|Ga0318553_10048265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2089	Open in IMG/M
3300032180\|Ga0307471_101328254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	881	Open in IMG/M
3300032180\|Ga0307471_101506085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	831	Open in IMG/M
3300032205\|Ga0307472_100509739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1039	Open in IMG/M
3300032261\|Ga0306920_102524315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	706	Open in IMG/M
3300032770\|Ga0335085_10059816	All Organisms → cellular organisms → Bacteria → Proteobacteria	5094	Open in IMG/M
3300032782\|Ga0335082_10042981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4725	Open in IMG/M
3300032955\|Ga0335076_10442320	All Organisms → cellular organisms → Bacteria → Proteobacteria	1183	Open in IMG/M
3300033158\|Ga0335077_10635600	All Organisms → cellular organisms → Bacteria → Proteobacteria	1108	Open in IMG/M
3300033433\|Ga0326726_10136576	All Organisms → cellular organisms → Bacteria → Proteobacteria	2225	Open in IMG/M
3300033815\|Ga0364946_141342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	553	Open in IMG/M
3300034090\|Ga0326723_0041121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1943	Open in IMG/M
3300034176\|Ga0364931_0158021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	732	Open in IMG/M
3300034178\|Ga0364934_0000329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	13118	Open in IMG/M
3300034354\|Ga0364943_0030540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1715	Open in IMG/M
3300034354\|Ga0364943_0151294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	837	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.59%
Host-Associated	Host-Associated	1.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.25%
Aquatic	Environmental → Aquatic	6.34%
Plants	Host-Associated → Plants	1.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.32%
Sediment	Environmental → Aquatic → Sediment	4.23%
Floodplain	Environmental → Terrestrial → Floodplain	3.52%
Freshwater	Environmental → Aquatic → Freshwater	2.11%
Peat	Environmental → Terrestrial → Peat	1.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.68%
Loam	Environmental → Terrestrial → Soil → Loam	14.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.23%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	3.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.41%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.23%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	3.52%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.41%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.04%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.23%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.52%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	3.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.41%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.41%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.41%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033815	Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_101464074	3300002908	Grasslands Soil	MTRHLTELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEASGVAERDAEATQRELLSLACHDAMGQ*
Ga0066673_105087022	3300005175	Soil	DDNEAHEMTRHLEELAPPRAREGLALVRAGREGTYWQAKDGLIVRVAARERDRDAETAQRELLELACRDAAGQ*
Ga0066679_107537391	3300005176	Soil	PKRYRAFLLPDTGEIDDNEAHEMTRHLEELAPPRAREGLALVRAGREGTYWQAKDGLIVRVAARERDRDAETAQRELLELACRDAAGQ*
Ga0066684_100370244	3300005179	Soil	MTRHLTELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEALGAAEPDAEATQRELLSLACRDAMGQ*
Ga0066678_101682211	3300005181	Soil	MTRHLEELAPPRAREGLALVRAGREGTYWQAKDGLIVRVAARERDRDAETAQRELLELACRDAAGQ*
Ga0070703_105341691	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MTRHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEPPGVGDRDAEAAQRELLVLACRDAAGQ*
Ga0066686_106423272	3300005446	Soil	MTRHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDAAGQ*
Ga0066686_110691961	3300005446	Soil	MTRVLEELAPPHARDDFELVRSGREGTYWQAADGLIVRLAAPEADGANRHDAEAAQRELLEIACRDAAAQ*
Ga0066686_110731711	3300005446	Soil	MTRQLTELARPRARDDLALVRAGREGTYWQAADGLIVRLAAPEALGAAEPDAEATQRELLSL
Ga0070706_1000169825	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTRHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEALGVADRDADAARELLTLACHDAMEQ*
Ga0070706_1001043822	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTRHLEELAPPRAREDLALVRAGREGTYWQAKDGLIVRVAARERDRDAETAQRDLLELACSDAAGQ*
Ga0070706_1011476041	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTRHLEKLARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEAPDAADRDTEAAQRELLVLACRDAAGQ*
Ga0070706_1018368741	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	HLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDATQQGSRT*
Ga0070707_1003049892	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	EEHEMTRHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEPPGVGDRDAEAAQRELLVLACRDAAGQ*
Ga0070707_1012400432	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LPDTGEIDDNEAHEMTRHLEELAPPRAREDLALVRAGREGTYWQAKDGLIVRVAARERDRDAETAQRDLLELACSDAAGQ*
Ga0070707_1019187861	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	RHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEAPDAADRDTEAAQRELLVLACRDAAGQ*
Ga0070698_1005748072	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTRHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEALGVADRDAEAARELLTLACHDAMEQ*
Ga0070699_1010233291	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTRHLEELARPRARDELALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDATQQGSRT*
Ga0070697_1002977212	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTRHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDATQQGSRT*
Ga0066697_104415781	3300005540	Soil	MTRHLEELAPPRARDGLALVRQGREGTYWQAADGLIVRLAAREADPDAEATQRELLMLACRDAGGQ*
Ga0070732_102147511	3300005542	Surface Soil	YRAFLLPGATYIDEEEEHEMTRTLQVPIAPRTRDDLALVRAGREGTYWQAPDGLLVRLAAPDTDRDAEVAQRELLTLACHDAVGQ*
Ga0070695_1003047262	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	PRARGDLALVRAGREGTYWQAADGLVVRLAAPEALGVADRDADAARELLTLACHDAMEQ*
Ga0066700_110322221	3300005559	Soil	RSLPTQRKPGSPKVARAFLLPGPTAIDYDEEQEMTRHLAELARPRARNDLALVRAGREGTYWQAADGLVVRLAAPEASGVAERDAEATQRELLSLACHDAMGQ*
Ga0066694_102605071	3300005574	Soil	SGGTIRNVAFLSRAKARPTERYRAFLLPDTRETDDNEAHEMTRHLEELAPPRARDGLALVRQGREGTYWQAADGLIVRLAAREADPDAEATQRELLMLACRDAGGQ*
Ga0066694_105601322	3300005574	Soil	FLLPGPSAIDDDEEQEMTRHLTELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEALGAAEPDAEATQRELLSLACRDAMGQ*
Ga0066702_104582222	3300005575	Soil	MTRHLTELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPETLGAAEPDAEATQRELLSLACRDAMGQ*
Ga0066903_1004639282	3300005764	Tropical Forest Soil	MTRTLLELAPPRGRADLELVRDGREGTFWQAADGLIVRVAAVENARDEEAAQRSLLALACRDAAGQ*
Ga0070716_1006764241	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTRHLEELARPRARDELALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDATQQG
Ga0079222_100025603	3300006755	Agricultural Soil	MTRHLGTLARPRDREDLVLVRRAREGTYWQSEDGLIVRLAAGESEQGAEAAQRELLALACRDAAGQ*
Ga0066653_106377911	3300006791	Soil	PPKRYRAFLLPDTGEINDNEAHEMTRHLEELAPPRAREGLALVRAGREGTYWQAKDGLIVRVAARERDRDAETAQRELLELACRDAAGQ*
Ga0066658_101597712	3300006794	Soil	MTRHLEELARPRARDDLALVRAGREGTYWQAADGLVFRLAASEPPGVADRDAEAAQRELLVLACRDAAGQ*
Ga0066665_101703401	3300006796	Soil	MTRVLEELAPPHARDDFEVVRSGREGTYWQAADGLIVRLAAPEADGANRHDAEAAQRELLEIACRDAAAQ*
Ga0075433_100313554	3300006852	Populus Rhizosphere	MTRHLEDLARPRARDDLALVHAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDATQQGSRT*
Ga0066710_1000073408	3300009012	Grasslands Soil	MTRHLEELAPPRARDGLALVRQGREGTYWQAADGLIVRLAAREADPDAEATQRELLMLACRDAGGQ
Ga0066710_1005462163	3300009012	Grasslands Soil	YRVLLSPVLGEIDDNRAHEMTRHLEELAPPRAREGLALVRAGREGTYWQAKDGLIVRVAARERDRDAETAQRELLELACRDAAGQ
Ga0066710_1025749432	3300009012	Grasslands Soil	MTRHLTELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPETLGAAEPDAEATQRELLSLACRDAMGQ
Ga0066710_1027061921	3300009012	Grasslands Soil	MTRHLEELARPRTRDDLALVRAGREGTYWQAADGLVVRLAAPESPGVADRDAEAAQRELLVLACRDAAGQ
Ga0099827_111831172	3300009090	Vadose Zone Soil	MTRHLEELAPPRARDDLALVRAGREGTYWQAKDGLIVRVAAREREAEAAQRELLVLACRDAAGQ*
Ga0066709_1012699752	3300009137	Grasslands Soil	VARAFLLPGPTAIDYDEEQEMTRHLAELARPRARNDLALVRAGREGTYWQAADGLVVRLAAPEALDVAERDAEATQRELLSLACHDAMGQ*
Ga0066709_1028279221	3300009137	Grasslands Soil	LTELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEALGAAEPDAEATQRELLSLACRDAMGQ*
Ga0066709_1040237581	3300009137	Grasslands Soil	MTRHPTELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEALGIAERDAEATQRELLSLACRDAMGE*
Ga0134070_101996032	3300010301	Grasslands Soil	HRAFLLPGGSKIDDDEEHKMTRHLEELARPRTRDDLALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDAAGQ*
Ga0134088_107222101	3300010304	Grasslands Soil	LLPGGSKIDDDEEHKMTRHLEELARPRTRDDLALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDAAGQ*
Ga0134080_103202642	3300010333	Grasslands Soil	MTRHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPESPGVADRDAEAAQRELLVLACRDAVGQ*
Ga0134080_106842781	3300010333	Grasslands Soil	RYRAFLLPDTRETDDNEAHEMTRHLEELAPPRARDGLALVRQGREGTYWQAADGLIVRLAAREADPDAEATQRELLMLACRDAGGQ*
Ga0134062_106633991	3300010337	Grasslands Soil	MTRHLTELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEALGAAEPDAEATQRELLSLAC
Ga0134066_102623611	3300010364	Grasslands Soil	LLPDTGEINDNEAHEMTRHLEELAPPRARDGLALVRQGREGTYWQAADGLIVRLAAREGDPDAEATQRELLMLACRDAGGQ*
Ga0126379_103683641	3300010366	Tropical Forest Soil	MTRTLLELAPPRTKDDLALVRDGRDGTYWQAKDGLIVRVAAGEKLRDAESAQRALLELASRDAAAQQ*
Ga0126381_1004175431	3300010376	Tropical Forest Soil	FGDFRRNAIDTPPRKPGPERSRAFFLAEGNESDDREAHEMTRITEALAPPRDRDAVLVRGGREGTYWQAPDGLIVRVATREVDRDSEKNARELLSLACRDAGGQ*
Ga0126383_118045822	3300010398	Tropical Forest Soil	MTRTLLELAPPRAKGELELVRNGREGTFWQARDGLIVRVAAAEEARDAEAAQRALLELACRDAVAQE*
Ga0126350_103161182	3300010880	Boreal Forest Soil	MTRPLEELMPPRARDDLSLVRAGRDGTYWQAADGLIVRVAAREAERDAEAAQRELLTLACRDASAQ*
Ga0137364_100686793	3300012198	Vadose Zone Soil	MTRHLEELAPPRARDGLALVRQGRDGTYWQAADGLIVRLAAREGDPDAEATQRELLMLACRDAGRQ*
Ga0137383_102109031	3300012199	Vadose Zone Soil	LLPDTHEIDDNEAHEMTRHLEELAPPRARDDLALVRAGREGTYWQGRDGLIVRIAARERDRDAEAAQRELLVLACRDAAGQ*
Ga0137365_110011131	3300012201	Vadose Zone Soil	PPKRYRAFLLPDTGETDDNEAHEMTRHLEELAPPRARDDLALVRAGREGTYWQARDGLIVRIAARERDRDAEAAQRELLVLACRDATGQ*
Ga0137365_112409062	3300012201	Vadose Zone Soil	LLPDTGETDDNEAHEMTRHLEELAPPRARDDLALVRAGREGTYWQARDGLIVRIAARERDRDAEAAQRELLVLACR
Ga0137362_111782522	3300012205	Vadose Zone Soil	LLPDTGETDDNEAHEMTRYLEELTPPRAREDLALVRAGREGTYWQARDGLIVRVAARERDRDAE
Ga0137380_103987941	3300012206	Vadose Zone Soil	LLPDTGETDDNEAHEMTRHLEELAPPRARDDLALVRAGREGTYWQARDGLIVRIAARERDRDAEAAQRELLVLACRDAVGQ*
Ga0137380_114282691	3300012206	Vadose Zone Soil	IDDDEEQEMTRHLTELARPRARDDLALVRAGREGTYWQAAQGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDAAGQ*
Ga0137381_102344131	3300012207	Vadose Zone Soil	LLPDTGETDDNEAHEMTRHLEELAPPRAREGLALVRAGREGTYWQAKDGLIVRVAARERDRDAETAQRELLELACRDAAGQ*
Ga0137379_101694031	3300012209	Vadose Zone Soil	LLPDTGEIDDNEAHEMTRHLEELAPPRAREGLALVRAGREGTYWQAKDGLIVRVAARERDRDAETAQRELLELACRDAAGQ*
Ga0137379_102778011	3300012209	Vadose Zone Soil	LPERKPGPPKRYRAFLLPDTGETDDNEAHEMTRHLEELAPPRARDDLALVRAGREGTYWQARDGLIVRIAARERDRDAEAAQRELLVLACRDAAGQ*
Ga0137378_108131101	3300012210	Vadose Zone Soil	LLPDTGETDDNEAHEMTRHLEELAPPRARDDLALVRAGREGTYWQARDGLIVRIAARERDRDAEAAQREL
Ga0137377_101082024	3300012211	Vadose Zone Soil	LAEKRHRAFLLPRASSIDDDEEHEMTRHPEELAQPRARDDLALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDAAGQ*
Ga0137387_103598171	3300012349	Vadose Zone Soil	LLPDTGETDDNEAHEMTRHLEELAPPRARDDLALVRAGREGTYWQARDGLIVRVAARERDREAEAAQRELLVLACRDAAGQ*
Ga0137372_101674424	3300012350	Vadose Zone Soil	MTRQLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLA
Ga0137372_103209402	3300012350	Vadose Zone Soil	MTRHLEELAPPRARDDLALVRAGREGTYWQARDGLIVRIAARERDRDAEAAQRELLVLACRDAAGQ*
Ga0137386_101229282	3300012351	Vadose Zone Soil	LLPDTGETDDNEAHEMTRHLEELAPPRARDDLALVRAGREGTYWQARDGLIVRIAARERDRDAEAAQRELLVLACRDAAGQ*
Ga0137386_104026862	3300012351	Vadose Zone Soil	MTRHRTELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEAPEAADRDAEAAQRELLSLACHDAMGQ*
Ga0137366_101615542	3300012354	Vadose Zone Soil	CRKRHRAFLLPRASSIDDDEEHEMTRQLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEPSGVADRDAEAAQRELLVLACRDAAGQ*
Ga0137366_106164881	3300012354	Vadose Zone Soil	LLPDTGEIDDNEAHEMTRHLEELAPPRAREDLALVRAGREGTYWQAKDGLIVRVAARERDRDAETAQRELLELACRD
Ga0137371_100960533	3300012356	Vadose Zone Soil	LLPDTGETDDNEAHEMTRHLEELAPPRARDDLALVRAGREGTYWQARDGLIVRIAARERDRDAEAAQRELLVLACRDATGQ*
Ga0137373_102190092	3300012532	Vadose Zone Soil	LLPEASWIDYDEEHKMTRHLEELARPRMRDDVALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDAAGQ*
Ga0132258_119707301	3300015371	Arabidopsis Rhizosphere	RYRAFLLPDTGEIDDNEAHEMTRHLEELAPPRAREDLALVRAGREGTYWQAKDGLIVRVAARERDRDAEAAQRELLELACRDANTQ*
Ga0182038_120784041	3300016445	Soil	TKMNEAQGMTRTLLVLAPPRARNDLELVRDGRKGTYWQAADGLIVRVAAAENARDEEAAQRALLALACRDAAEQ
Ga0187825_102107831	3300017930	Freshwater Sediment	MTSHLEGLAPPRARDDLALVRGRDGTYWQAADGLIVRVAAREAEPGAEAAQRALLKLACRDANAQ
Ga0187821_103842401	3300017936	Freshwater Sediment	TGTGLFCCHGASDCDDDKAQEMTRHLAELAPPRARDDLALVRAGREGTYWQAADGLIVRIAAHEAQGDAPTTQRELLTLACRDANAQ
Ga0187779_100086265	3300017959	Tropical Peatland	MTKTLLEPVRPRWRDDLALVRGGREGTYWQAPDGLIVRLAGSEGVGDAEIEQRELLALACRDAAAQ
Ga0187779_101574972	3300017959	Tropical Peatland	MTRSLLDLVRPRARDDLELVRGGREGTYWQAADGLIVRLATAESECDAEAVQRELFTLACRDAAAQK
Ga0187779_106010881	3300017959	Tropical Peatland	MTRTLLEPVRPRGRDDLALVRGGREGTYWQAPDGLIVRLAGAEGIGEAEIEQRELLALACRDAAAQ
Ga0187778_102790392	3300017961	Tropical Peatland	LLEPVRPRWRDDLALVRGGREGTYWQAPDGLIVRLAGSEGVGDAEIEQRELLALACRDAAAQ
Ga0187778_104857872	3300017961	Tropical Peatland	MTRSLLDLVRPRARDDLELVRGGREGTYWQAADGLIVRLATPESECDAEAVQRELFTLACRDAAAQK
Ga0187780_103953221	3300017973	Tropical Peatland	MTKTLLEPVRPRWRDDLALVRGGREGTYWQAPDGLIVRLAVAEGKGEAELAQRELFVLACRDAAAQ
Ga0187767_100995051	3300017999	Tropical Peatland	MTKTLLEPVRPRWRDDLALVRGGREGTYWQAPDGLIVRLAGSEGVGDAEIEQRELLALACRDAA
Ga0184623_101106552	3300018056	Groundwater Sediment	MTRHLDELARPRARDDVALVRAGREGTYWQAADGLVVRLAAPEAPGVADRDTEAAQRELLTLACHDAMGQ
Ga0184623_101115941	3300018056	Groundwater Sediment	MTRHLEELARPRTRDDVALVRAGREGTYWQAADGLVVRLAAPEAPGVADRDTEAAQRELLTLACHDAMGQ
Ga0187766_107821561	3300018058	Tropical Peatland	MTRSLLDLVRPRARDDLELVRGGREETYWQAADGLIVRLATPESECDAEAVQRKLFALACRDAAAQK
Ga0187765_100140734	3300018060	Tropical Peatland	MTKTLLEPVRPRWRDDLALVRGGREGTYWQARDGLIVRLAGSEGVGDAEIEQRELLALACRDAAAQ
Ga0187765_100919922	3300018060	Tropical Peatland	MTRSLLDLVRPRARDDLELVRGGREGTYWQAADGLIVRLATPESECDAEAVQRKLFALACRDAAAQK
Ga0187765_101204582	3300018060	Tropical Peatland	MTRTLVEPVRPRGREDLALVRGGREGTYWQAPDGLIVRLAMAEGDEGAELVQRELFALACRDAAAQ
Ga0184632_102341092	3300018075	Groundwater Sediment	MTRHVEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEASGVADRDAEAAQRELLTLACHDAMEQ
Ga0184612_101194242	3300018078	Groundwater Sediment	MTKHLEELARPRARDDLALVRAGREGTYWQAADGLIVRLAAPEARGVANRDAEAVQRELLTLACHDAMEQ
Ga0184629_107212611	3300018084	Groundwater Sediment	MTKHVEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEARGVANRDAEAVQRELLTLACHDAMEQ
Ga0066655_104663381	3300018431	Grasslands Soil	MTRHLTELARPRARDDLALVRAGREGTYWQAADGLIVRLAAPEALGAAEPDAEATQRELLSLACRDAMGQ
Ga0066667_105446852	3300018433	Grasslands Soil	MTRVLEELAPPHARDDFELVRSGREGTYWQAADGLIVRLAAPEADGANRHDAEAAQRELLEIACRDAAAQ
Ga0210379_103903111	3300021081	Groundwater Sediment	MTRHLDELARPRTRDDLALVRAGREGTYWQAADGLVVRLAAPEARGVANRDAEAVQRELLTLACHDAMEQ
Ga0210384_100643402	3300021432	Soil	MTRLLTEPIRPRARDDLVLVRAGCEGTYWQAADGLLVRLAAPETERAAEAAQRELLTLACHDAVKQ
Ga0210384_103285561	3300021432	Soil	ERKPGLPNRYRAFLLPGPSDSDDNEAHEMTRHLEDLAPPRARDDLALVRAGREGTYWQAADGLIVRLATHETERDAETTQRELLALACRDAAEQ
Ga0210402_100113512	3300021478	Soil	MTRQLEELVPPRTRDDLALVRRGREGTYWQAADGLIVRVAAREAERDAEAMQRELLTLACRDAHGQ
Ga0210402_104069082	3300021478	Soil	MTRYLAELAPPRTRDDLALVRAGREGTYWQAADGLIVRVAAHEAERDAETAQRELLMLACRDANAQ
Ga0126371_114561041	3300021560	Tropical Forest Soil	RAFLLPWAIETKMNEAQEMTRTLLELAPPRGRADLELVRDGREGTYWQAADGLVVRVAAAENAREQEAAQRALLALACRDAAEQ
Ga0224452_10100105	3300022534	Groundwater Sediment	MTKHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEAPGVADRDAEAAQRELLTLACHDAMEQ
Ga0207684_101656091	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTRHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEALGVADRDADAARELLTLACHDAMEQ
Ga0207684_102752352	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTRHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEPPGVGDRDAEAAQRELLVLACRDAAGQ
Ga0207684_109462421	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTRHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEAPDAADRDTEAAQRELLVLACRDAAGQ
Ga0207665_102725601	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTRHLEELARPRARDELALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDATQQGSRT
Ga0209131_12361611	3300026320	Grasslands Soil	MTRHLEELAPPRARDDLALVRAGREGTYWQAKDGLIVRVAAREREAEAAQRELLVLACRDAAGQ
Ga0209472_10803842	3300026323	Soil	MTRHLTELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEALGAAEPDAEATQRELLSLACRDAMGQ
Ga0209267_12926821	3300026331	Soil	MTRQLTELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDAAGQ
Ga0257164_10522171	3300026497	Soil	MTRHLEELAPPRARDDLALVRAGREGTYWQAKDGLIVRVAARERERDAEAAQRELLVLACRDAAGQ
Ga0209056_104102782	3300026538	Soil	VIDDDEEQEMTRHLTELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEASGVAERDAEATQRELLSLACHDAMGQ
Ga0209577_108578531	3300026552	Soil	MTRHLTELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEALGAAKPDAEATQRELLSLACRDAMGQ
Ga0209003_10152631	3300027576	Forest Soil	PTESPAAESSGLFCCPEAHQSDVEEAQEMTRTILELAPPRPRDDLELVRDGREGTYWQAADGLIVRVAATETLRDEEAAQRALLGLACRDAAEQ
Ga0209178_10004959	3300027725	Agricultural Soil	MTRHLGTLARPRDREDLVLVRRAREGTYWQSEDGLIVRLAAGESEQGAEAAQRELLALACRDAAGQ
Ga0209689_10992862	3300027748	Soil	MTRHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDAAGQ
Ga0209580_105196352	3300027842	Surface Soil	YRAFLLPGATYIDEEEEHEMTRTLQVPIAPRTRDDLALVRAGREGTYWQAPDGLLVRLAAPDTDRDAEVAQRELLTLACHDAVGQ
Ga0170824_1068824351	3300031231	Forest Soil	MTRQLEELAPPRTRDDLALVRRGREGTYWQAKDGLIVRVAARERDAEAAQRELLVLACRDAAGQ
Ga0318516_100930911	3300031543	Soil	MTRTLLVLAPPRARNDLELVRDGRKGTYWQAADGLIVRVAAAENARDEEAAQRALLALACRDAAEQ
Ga0318574_108410561	3300031680	Soil	WAIETKMNEAQGMTRTLLVLAPPRARNDLELVRDGRKGTYWQAADGLIVRVAAAENARDEEAAQRALLALACRDAAEQ
Ga0307469_100668332	3300031720	Hardwood Forest Soil	MTRHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEAPGAADRDAEATQRELLVLACRDAAGQ
Ga0307469_101736892	3300031720	Hardwood Forest Soil	MTRTLLELAPPRPRGDLELVRDGREGTYWQATDGLIVRVAAAETLRDEEAAQRALLALACRDAAAQR
Ga0318493_107764381	3300031723	Soil	EAQGMTRTLLVLAPPRARNDLELVRDGRKGTYWQAADGLIVRVAAAENARDEEAAQRALLALACRDAAEQ
Ga0307468_1005745852	3300031740	Hardwood Forest Soil	MTRHLEELARPRTRDDLALVRASREGTYWQAADGLVVRLAAPEATGVADRDTEAAQRELLALACRDAKAQ
Ga0307468_1006737732	3300031740	Hardwood Forest Soil	MTKHLEELARPRARDDLALVRAGRDGTYWQAADGLVVRLAAPEAHGVADRGAEAAQRELLTLACHDAMEQ
Ga0318552_100090836	3300031782	Soil	ETKMNEAQGMTRTLLVLAPPRARNDLELVRDGRKGTYWQAADGLIVRVAAAENARDEEAAQRALLALACRDAAEQ
Ga0307473_103991722	3300031820	Hardwood Forest Soil	MTRAILELAPPRPRDDLKLVRDGCEGTYWQAADGLIVRVAAAETLRDEEAAQRALLALACRD
Ga0307473_109162622	3300031820	Hardwood Forest Soil	SIDDDEEHEMTRHLEELARPRARDELALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLVLACRDATQQGSRT
Ga0318553_100482651	3300032068	Soil	LLELAPPRARDDLELVREGREGTYWQAADGLIVRVAAAENARDEEAAQRALLELACRDAAEQ
Ga0307471_1013282541	3300032180	Hardwood Forest Soil	MTRHLEELARPRVRDDLALVRAGREGTYWQAADGLVIRLAAPETPGAGDRDAETAQRELLTLACHDAMEQ
Ga0307471_1015060852	3300032180	Hardwood Forest Soil	MTRHLEELARPRARDELALVRAGREGTYWQAADGLVVRLAAPEPPGVADRDAEAAQRELLLLACRDAAGQ
Ga0307472_1005097391	3300032205	Hardwood Forest Soil	MTRAILELAPPRPRDDLKLVRDGCEGTYWQAADGLIVRVAAAETLRDEEAAQRALLALACRDAAAQR
Ga0306920_1025243153	3300032261	Soil	MNEAQEMTRTLLELAPPRARDDLELVRDGCNGTYWQAADGLIVRVAAAENARDEEAAQRALLALACRDATEQ
Ga0335085_100598162	3300032770	Soil	MTRTLLEPVRPRGRDDLALVRGGREGTYWQAQDGLIVRLAGAESAGEAEIAQRELLALACRDAAAQ
Ga0335082_100429815	3300032782	Soil	MTRTLLEPVRPRGRDDLALVRGGREGTYWQAPDGLIVRLAGAESAGEAEIAQRELLALACRDAAAQ
Ga0335076_104423202	3300032955	Soil	ACGHGNDESEAQEMTRTLLEPVRPRGRDDLALVRGGREGTYWQAQDGLIVRLAGAESAGEAEIAQRELLALACRDAAAQ
Ga0335077_106356002	3300033158	Soil	MTRTLLEPVRPRGRDDLALVRGGREGTYWRAQDGLIVRLAGAESAGEAEIAQRELLALACRDAAAQ
Ga0326726_101365763	3300033433	Peat Soil	MTRDLEELTPPRARDDLALVRAGREGTYWQAKDGLIVRVAARERDRDAEATQRELLMLACRDAAGQ
Ga0364946_141342_304_552	3300033815	Sediment	LLSGASKRDDDEEHKMTRHLEDLARPRARDDVALVRAGREGTYWQAADGLVVRLAAPEAPGVADRDTEAAQRELLTLASHDAM
Ga0326723_0041121_1658_1903	3300034090	Peat Soil	LLPDTAEIDDKKAYEMTRDLEELTPPRARDDLALVRAGREGTYWQAKDGLIVRVAARERDRDAEATQRELLMLACRDAAGQ
Ga0364931_0158021_288_611	3300034176	Sediment	MIRSAYAPSTESPACQNGTRAFLLPGASKSDDDEEHKMTKHLEELARPRARDDLALVRAGREGTYWQAADGLVVRLAAPEARGVANRDAEAVQRELLTLACHDAMEQ
Ga0364934_0000329_4963_5220	3300034178	Sediment	LLSGASKRDDDEEHKMTRHLEDLARPRARDDVALVRAGREGTYWQAADGLVVRLAAPEAPGVADRDTEAAQRELLTLASHDAMEQ
Ga0364943_0030540_886_1209	3300034354	Sediment	MIRSAYAPSTESPACQNGTRAFLLPGASKSDDDEEHKMTKHLEELARPRARDDLALVRAGREGTYWQAADGLIVRLAAPEARGVANRDAEAVQRELLTLACHDAMEQ
Ga0364943_0151294_83_340	3300034354	Sediment	LSPGASKTDDIEEHKMTRHLEELARPRARDDLALVRASREGTYWQAADGLVVRLAAPEATGVADRDMEAAQRELLALACRDAMGQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052805

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences