Metagenome Family F052784

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052784
Family Type	Metagenome
Number of Sequences	142
Average Sequence Length	78 residues
Representative Sequence	MAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE
Number of Associated Samples	117
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.07 %
% of genes near scaffold ends (potentially truncated)	33.80 %
% of genes from short scaffolds (< 2000 bps)	90.14 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.225 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil (9.859 % of family members)
Environment Ontology (ENVO)	Unclassified (41.549 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.268 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.25% β-sheet: 25.47% Coil/Unstructured: 45.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.58.11.0: automated matches	d6id0c3	6id0	0.68864
d.58.64.1: Cytosolic domain of anoctamin channels	d4wisa2	4wis	0.65708
d.58.4.0: automated matches	d5xzta_	5xzt	0.64424
d.58.4.0: automated matches	d4w7ka_	4w7k	0.644
d.58.4.11: PA3566-like	d1y0ha_	1y0h	0.64327

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF13411	MerR_1	16.90
PF00563	EAL	11.97
PF07690	MFS_1	4.23
PF13489	Methyltransf_23	3.52
PF00990	GGDEF	2.11
PF00753	Lactamase_B	2.11
PF08241	Methyltransf_11	0.70
PF00196	GerE	0.70
PF09424	YqeY	0.70
PF09335	SNARE_assoc	0.70
PF00872	Transposase_mut	0.70
PF01569	PAP2	0.70
PF13365	Trypsin_2	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	11.97
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	11.97
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	11.97
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	11.97
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.70
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.70
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.70
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.23 %
Unclassified	root	N/A	45.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.23 %
Unclassified	root	N/A	45.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.23 %
Unclassified	root	N/A	45.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	43.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17.61 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	15.49 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.77 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	15.49 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	14.79 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.41 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.70 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.77 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	15.49 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	7.04 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.41 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.41 %
Iamiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	0.70 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.77 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	14.79 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	7.04 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.41 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.70 %
Rhabdothermincola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola	0.70 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.70 %
Pilimelia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Pilimelia	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.77 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	14.79 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	2.11 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.41 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.70 %
Rhabdothermincola salaria	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria	0.70 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.70 %
Pilimelia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Pilimelia	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001305\|C688J14111_10294173	Not Available	514	Open in IMG/M
3300001686\|C688J18823_10082709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2228	Open in IMG/M
3300001686\|C688J18823_10112782	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300002568\|C688J35102_118963895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	619	Open in IMG/M
3300002568\|C688J35102_119367557	Not Available	682	Open in IMG/M
3300002568\|C688J35102_119661867	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300002568\|C688J35102_119688147	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300002568\|C688J35102_120387400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Pilimelia	1031	Open in IMG/M
3300002568\|C688J35102_120577234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1200	Open in IMG/M
3300002568\|C688J35102_120670408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1326	Open in IMG/M
3300002568\|C688J35102_120824058	All Organisms → cellular organisms → Bacteria → Proteobacteria	1702	Open in IMG/M
3300002568\|C688J35102_120884456	All Organisms → cellular organisms → Bacteria	2012	Open in IMG/M
3300003321\|soilH1_10072727	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300004081\|Ga0063454_100081386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria	1457	Open in IMG/M
3300004153\|Ga0063455_100031170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1605	Open in IMG/M
3300004463\|Ga0063356_100218452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2270	Open in IMG/M
3300004479\|Ga0062595_102654964	Not Available	503	Open in IMG/M
3300004643\|Ga0062591_100498628	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300005327\|Ga0070658_11244712	Not Available	647	Open in IMG/M
3300005329\|Ga0070683_100211472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1842	Open in IMG/M
3300005329\|Ga0070683_100550230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1103	Open in IMG/M
3300005330\|Ga0070690_100319886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1118	Open in IMG/M
3300005331\|Ga0070670_100478174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1106	Open in IMG/M
3300005332\|Ga0066388_101658825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1129	Open in IMG/M
3300005337\|Ga0070682_100858016	Not Available	743	Open in IMG/M
3300005338\|Ga0068868_101852553	Not Available	571	Open in IMG/M
3300005355\|Ga0070671_100076323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2800	Open in IMG/M
3300005356\|Ga0070674_101699256	Not Available	571	Open in IMG/M
3300005364\|Ga0070673_100525752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1072	Open in IMG/M
3300005365\|Ga0070688_100361137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1066	Open in IMG/M
3300005366\|Ga0070659_100090347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2454	Open in IMG/M
3300005437\|Ga0070710_11007454	Not Available	607	Open in IMG/M
3300005439\|Ga0070711_100117048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1965	Open in IMG/M
3300005441\|Ga0070700_100271886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1225	Open in IMG/M
3300005455\|Ga0070663_100087795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2299	Open in IMG/M
3300005456\|Ga0070678_100193429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1674	Open in IMG/M
3300005539\|Ga0068853_102175879	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005544\|Ga0070686_100113126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1852	Open in IMG/M
3300005545\|Ga0070695_101772160	Not Available	518	Open in IMG/M
3300005546\|Ga0070696_101111077	Not Available	665	Open in IMG/M
3300005547\|Ga0070693_101091525	Not Available	608	Open in IMG/M
3300005547\|Ga0070693_101424274	Not Available	539	Open in IMG/M
3300005564\|Ga0070664_100218774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1704	Open in IMG/M
3300005578\|Ga0068854_100634068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	916	Open in IMG/M
3300005614\|Ga0068856_100481670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1262	Open in IMG/M
3300005615\|Ga0070702_100441675	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300005615\|Ga0070702_101014208	Not Available	658	Open in IMG/M
3300005618\|Ga0068864_100644609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1031	Open in IMG/M
3300005719\|Ga0068861_100469916	Not Available	1131	Open in IMG/M
3300005834\|Ga0068851_10785179	Not Available	591	Open in IMG/M
3300005840\|Ga0068870_10116108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1535	Open in IMG/M
3300005842\|Ga0068858_100465787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1219	Open in IMG/M
3300005844\|Ga0068862_100365986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1341	Open in IMG/M
3300006173\|Ga0070716_101629077	Not Available	531	Open in IMG/M
3300006854\|Ga0075425_102082649	Not Available	633	Open in IMG/M
3300006881\|Ga0068865_100926089	Not Available	759	Open in IMG/M
3300006904\|Ga0075424_102350578	Not Available	560	Open in IMG/M
3300009094\|Ga0111539_11530900	Not Available	773	Open in IMG/M
3300009156\|Ga0111538_12016227	Not Available	726	Open in IMG/M
3300009176\|Ga0105242_10512282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1143	Open in IMG/M
3300009551\|Ga0105238_11579071	Not Available	686	Open in IMG/M
3300009553\|Ga0105249_11109333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	861	Open in IMG/M
3300009553\|Ga0105249_12263234	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300009553\|Ga0105249_13087791	Not Available	535	Open in IMG/M
3300009789\|Ga0126307_10247927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1432	Open in IMG/M
3300009840\|Ga0126313_10620532	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300009840\|Ga0126313_10946534	Not Available	704	Open in IMG/M
3300010038\|Ga0126315_10055857	Not Available	2158	Open in IMG/M
3300010039\|Ga0126309_10018464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	3011	Open in IMG/M
3300010041\|Ga0126312_10762002	Not Available	701	Open in IMG/M
3300010373\|Ga0134128_10625677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1197	Open in IMG/M
3300010373\|Ga0134128_10994679	Not Available	927	Open in IMG/M
3300010375\|Ga0105239_13452423	Not Available	514	Open in IMG/M
3300010399\|Ga0134127_12833811	Not Available	564	Open in IMG/M
3300010400\|Ga0134122_11849229	Not Available	637	Open in IMG/M
3300010403\|Ga0134123_10124077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2096	Open in IMG/M
3300010403\|Ga0134123_10535064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1111	Open in IMG/M
3300010403\|Ga0134123_10901079	Not Available	890	Open in IMG/M
3300011119\|Ga0105246_12232671	Not Available	533	Open in IMG/M
3300012212\|Ga0150985_101281646	Not Available	526	Open in IMG/M
3300012212\|Ga0150985_120784959	Not Available	585	Open in IMG/M
3300012897\|Ga0157285_10318243	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300012908\|Ga0157286_10441290	Not Available	515	Open in IMG/M
3300012951\|Ga0164300_10981354	Not Available	542	Open in IMG/M
3300012955\|Ga0164298_10558143	Not Available	778	Open in IMG/M
3300012960\|Ga0164301_10703484	Not Available	761	Open in IMG/M
3300012961\|Ga0164302_10677536	Not Available	760	Open in IMG/M
3300012989\|Ga0164305_10285626	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300013297\|Ga0157378_13058924	Not Available	519	Open in IMG/M
3300014326\|Ga0157380_10582449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1104	Open in IMG/M
3300014488\|Ga0182001_10201557	Not Available	728	Open in IMG/M
3300014745\|Ga0157377_10133216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1520	Open in IMG/M
3300014745\|Ga0157377_10487303	Not Available	859	Open in IMG/M
3300015371\|Ga0132258_11649580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1618	Open in IMG/M
3300015372\|Ga0132256_100094761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2894	Open in IMG/M
3300015373\|Ga0132257_102182699	Not Available	716	Open in IMG/M
3300015374\|Ga0132255_104760920	Not Available	575	Open in IMG/M
3300017792\|Ga0163161_10818180	Not Available	784	Open in IMG/M
3300024347\|Ga0179591_1025307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3152	Open in IMG/M
3300025315\|Ga0207697_10538244	Not Available	514	Open in IMG/M
3300025321\|Ga0207656_10337599	Not Available	750	Open in IMG/M
3300025899\|Ga0207642_10776008	Not Available	608	Open in IMG/M
3300025900\|Ga0207710_10119070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1260	Open in IMG/M
3300025908\|Ga0207643_10187864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1253	Open in IMG/M
3300025908\|Ga0207643_10202269	Not Available	1210	Open in IMG/M
3300025918\|Ga0207662_10021448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3693	Open in IMG/M
3300025924\|Ga0207694_11799704	Not Available	515	Open in IMG/M
3300025925\|Ga0207650_10112590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2109	Open in IMG/M
3300025931\|Ga0207644_10145704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1828	Open in IMG/M
3300025932\|Ga0207690_10620111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	884	Open in IMG/M
3300025932\|Ga0207690_10893128	Not Available	737	Open in IMG/M
3300025934\|Ga0207686_10438010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1003	Open in IMG/M
3300025936\|Ga0207670_10422015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1070	Open in IMG/M
3300025937\|Ga0207669_10172379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1542	Open in IMG/M
3300025942\|Ga0207689_10209216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1611	Open in IMG/M
3300025961\|Ga0207712_11750390	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300026023\|Ga0207677_11237367	Not Available	684	Open in IMG/M
3300026075\|Ga0207708_10039353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3602	Open in IMG/M
3300026088\|Ga0207641_12435462	Not Available	522	Open in IMG/M
3300026095\|Ga0207676_12298469	Not Available	537	Open in IMG/M
3300026118\|Ga0207675_100541550	Not Available	1162	Open in IMG/M
3300027907\|Ga0207428_10971568	Not Available	598	Open in IMG/M
3300028379\|Ga0268266_10598777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1059	Open in IMG/M
3300028380\|Ga0268265_10250954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1567	Open in IMG/M
3300028381\|Ga0268264_10572162	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300028381\|Ga0268264_11048625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	823	Open in IMG/M
3300028587\|Ga0247828_10242482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	964	Open in IMG/M
3300028589\|Ga0247818_11267832	Not Available	528	Open in IMG/M
3300028592\|Ga0247822_10825630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	757	Open in IMG/M
3300028596\|Ga0247821_10494991	Not Available	776	Open in IMG/M
3300028705\|Ga0307276_10013386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1506	Open in IMG/M
3300028812\|Ga0247825_10186185	Not Available	1433	Open in IMG/M
3300028812\|Ga0247825_10563064	Not Available	814	Open in IMG/M
3300028889\|Ga0247827_10424080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	814	Open in IMG/M
3300030336\|Ga0247826_10677543	Not Available	798	Open in IMG/M
3300030336\|Ga0247826_11217507	Not Available	604	Open in IMG/M
3300031152\|Ga0307501_10037477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1028	Open in IMG/M
3300031720\|Ga0307469_12334834	Not Available	522	Open in IMG/M
3300031852\|Ga0307410_10183508	Not Available	1586	Open in IMG/M
3300031858\|Ga0310892_10233194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1126	Open in IMG/M
3300031995\|Ga0307409_102660428	Not Available	529	Open in IMG/M
3300032005\|Ga0307411_10213762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1491	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.70%
Host-Associated	Host-Associated	49.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.70%
Plants	Host-Associated → Plants	49.30%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.54%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.76%
Loam	Environmental → Terrestrial → Soil → Loam	23.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.52%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	9.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	9.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.23%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.23%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.52%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.11%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.11%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.41%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.70%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.70%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J14111_102941732	3300001305	Soil	MAVVIPIRFAGADPSRRDRIVGVLRDHGIDVRRGAVDGLGELYLLRANAGLAARGAITDLLERHVPGWQGAVEFYWPE*
C688J18823_100827092	3300001686	Soil	MAVVIPIRFAGSDPGRRERIVQLLQDHGHEVRRGDVEGLGELYLLRTNAGLAERAAITDLLERHVPGWQAAAEFYWPD*
C688J18823_101127822	3300001686	Soil	MAVVIPIRFAGADPGRRDRIVGVLRDHGIDVRRGAVDGLGELYLLRANAGLAARGAITDLLERHVPGWQAAVEFYWPE*
C688J35102_1189638951	3300002568	Soil	MAVVIPIRFAGADPRRRDHIVRVLQDHGLDVRRSEVDGLGDLYLLRAQPTRLARGEITDLLERRAPGWQSAAEFYWPE*
C688J35102_1193675572	3300002568	Soil	MAVVIPIRFAGSDPGRRERIVRVLQDHGHDVRRGDVAAADLGELYLLRATPGLAERRTITDLLERHVPGWQAAAEFYWPD*
C688J35102_1196618671	3300002568	Soil	MAVVVPIRFADDPGRRDRIVRVLKDHGIDVRRGAVEGFGELYLLRANAGLASRGTIIDLLERHVPGWQAAVEFYWPE*
C688J35102_1196881472	3300002568	Soil	MAVVIPIRFAGVDPARRDRIVHVLRDHGIDVRRGAVEGFGELYLLRANAGLAARGAITDLLERHVPGWQSAVEFYWPE*
C688J35102_1203874002	3300002568	Soil	MAVVIPIRFAGDAGRRDRIVRVLRDHGIDVRRGAVEGVGELYLLRANAGLAARGTITDLLERHVPGWQAAVEFYWPD*
C688J35102_1205772341	3300002568	Soil	MAVVIPIRFAGSDPGRRERIVRVLQDHGHDVRRGDVAAAELGELYLLRTTPGLAERRTITDLLERHVPGWQAAAEFYWPD*
C688J35102_1206704081	3300002568	Soil	MAVVIPIRFAGADPCRRDRIVAVLKDNGIDVRRGAVEGLGELYLLRAHTGLAARGAITELLERHVPGWQGAVEFYWPE*
C688J35102_1208240582	3300002568	Soil	MAVVIPIRFADADPSRRDRIVRVLRDHGIDVRRGAVEGLGELYLLRANAGLAARGTIIDLLERHVPGWQAAVEFYWPE*
C688J35102_1208844562	3300002568	Soil	MAVVIPIRFAGSDPGRRDRIVQVLRDHGIDVRRGAVEGLGELYLLRANAGSAARGAITDLLERHEPGWQAAVEFYWPE*
soilH1_100727272	3300003321	Sugarcane Root And Bulk Soil	MAVVIPIRFAGADAGRRDRIVRVLRDNGIDVRRGAVEGFGELYLLRANAGLAARGAITDLLDCHVPGWQGAVEFYWPE*
Ga0063454_1000813863	3300004081	Soil	MAVVIPIRFAGADPGRRERIVRVLRDNGIDVRRGAVDGFGELYLLRANAGASRGTITDLLERHVPGWQAAVEFYWPE*
Ga0063455_1000311701	3300004153	Soil	MAVVIPIRFAGADPRRRDHIVRVLQDHGLDVRRSEVDGLGDLYLLRAQPTRSARGEITDLLERRAPGWQSAAEFYWPE*
Ga0063356_1002184523	3300004463	Arabidopsis Thaliana Rhizosphere	MAVVIPIRFASADPGRKDRIVRVLEDHGIDVRRTAVDGLGDLYLLRANAGLAARGMIIDLLEDNVPGWQAAVQFYWPE*
Ga0062595_1026549642	3300004479	Soil	MAVVIPIRFAGADPGRRERIVAVLRDNGIDVRRGAVDGFGELYLLRANAGLAARGTITDLLERHVPGWQAAVEFYWPE
Ga0062591_1004986282	3300004643	Soil	MAVVIPIRFAGADPGRRERIVRVLRDNGIDVRRGAVDGFGELYLLRANAGLAARGTITDLLERHVPGWQAAVEFYWPE*
Ga0070658_112447122	3300005327	Corn Rhizosphere	MAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0070683_1002114723	3300005329	Corn Rhizosphere	MAVVIPIRFASADPGRRDRIVGTLRANGIDVRRSDVQGLGPGELYLLRAHAGLAARGVITDLLERHVPGWPAEAEFYWPE*
Ga0070683_1005502303	3300005329	Corn Rhizosphere	MAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFYWPE*
Ga0070690_1003198861	3300005330	Switchgrass Rhizosphere	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDN
Ga0070670_1004781741	3300005331	Switchgrass Rhizosphere	MAVVIPIRFASADPGRRDRIVGTLRANGIDVRRSDVQGLGPGELYLLRAHAGLAARGMITDLLERHVPGWQAEAEFYWPE*
Ga0066388_1016588252	3300005332	Tropical Forest Soil	MAVVIPIRFASADPGRKDRIVRVLQEHGIDVRRSEGSGLGELYLLRANAGLAARGAITDLLEREVPGWQDEAEFYWPE*
Ga0070682_1008580161	3300005337	Corn Rhizosphere	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFYWPE*
Ga0068868_1018525531	3300005338	Miscanthus Rhizosphere	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWEAAVQFYWPE*
Ga0070671_1000763233	3300005355	Switchgrass Rhizosphere	MAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLATRRTIIDLLEDNVPGWQAAVHFYWPE*
Ga0070674_1016992562	3300005356	Miscanthus Rhizosphere	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFYWP
Ga0070673_1005257523	3300005364	Switchgrass Rhizosphere	MAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE
Ga0070688_1003611371	3300005365	Switchgrass Rhizosphere	TMAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFYWPE*
Ga0070659_1000903473	3300005366	Corn Rhizosphere	MAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0070710_110074542	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	WARGATMAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANTGLAERRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0070711_1001170482	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANTGLAERRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0070700_1002718862	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MAVVIPIRFASADPARKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLATRRTIIDLLEDNVPGWQAAVHFYWPE*
Ga0070663_1000877952	3300005455	Corn Rhizosphere	MAVVIPIRFASADPGRRDRIVGTLRANGIDVRRSDVQGLGPGELYLLRAPAGLAARGVITDLLERHVPGWQAEAEFYWPE*
Ga0070678_1001934291	3300005456	Miscanthus Rhizosphere	MAVVIPIRFASADPGRRDRIVGTLRANGIDVRRSDVQGLGPGELYLLRAHAGLAARGVITDLLERHVPGWQAEA
Ga0068853_1021758792	3300005539	Corn Rhizosphere	MAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVP
Ga0070686_1001131263	3300005544	Switchgrass Rhizosphere	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNV
Ga0070695_1017721602	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	DPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFYWPE*
Ga0070696_1011110771	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MAVVIPIRLASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVHFYWPE*
Ga0070693_1010915251	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAVVIPIRFASADPGRRDRIVGTLRANGIDVRRSDVQGLGPGELYLLRAPAGLAARGVITDLLERHVPGWPAEAEFYWPE*
Ga0070693_1014242741	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MMAVVIPIRFAGADPGRRERIVRVLRDHGIDVRRGAVDGFGDLYLLRANAGLAARGTIIDLLERHVPGWQAAVEFYWPE*
Ga0070664_1002187743	3300005564	Corn Rhizosphere	MAVVIPIRFASADPGRRDRIVGTLRANGIDVRRSDVQGLGPGELYLQRAHAGLAARGMITDLLERHVPGWQAEAEFYWPE*
Ga0068854_1006340681	3300005578	Corn Rhizosphere	LSGPRARGATMAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFYWPE*
Ga0068856_1004816703	3300005614	Corn Rhizosphere	MAVVIPIRFASADPGRRDRIVGTLRANGIDVRRSDVQGLEPGELYLLRAHAGLAARGMITDLLERHVPGWQAEAE
Ga0070702_1004416752	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVRFYWPE*
Ga0070702_1010142082	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MAVVIPIRFASADPGLRDRIVGILRDNGIDVRRSDVQGLGVGELYLLRANARVAARGMITDLLERHVPGWQAEAEFYWPE*
Ga0068864_1006446092	3300005618	Switchgrass Rhizosphere	RDRIVGTLRANGIDVRRSDVQGLGPGELYLLRAHAGLAARGVITDLLERHVPGWQAEAEFYWPE*
Ga0068861_1004699162	3300005719	Switchgrass Rhizosphere	MAVVIPIRFAGADPGRRERIVAVLRDNGIDVRRGAVDGFGELYLLRANAGLAARGNSTDLLERHVPGWQAAVEFYWPE*
Ga0068851_107851792	3300005834	Corn Rhizosphere	PLSGAWARGATMAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0068870_101161082	3300005840	Miscanthus Rhizosphere	MAVVIPIRFASADPGRRDRIVGTLRANGIDVRRSDVQGLGPGELYLLRAHAGLAARGVITDLLERHVPGWQAEAEFYWPE*
Ga0068858_1004657872	3300005842	Switchgrass Rhizosphere	VVIPIRFASADPERKDSIVRVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0068862_1003659862	3300005844	Switchgrass Rhizosphere	IPIRFASADPERKDSIVRVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0070716_1016290771	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RLRGATMAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANTGLAERRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0075425_1020826492	3300006854	Populus Rhizosphere	MAVVIPIRFASADQGRKDRIVAVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLDDNVPGWQAAVQFYWPE*
Ga0068865_1009260891	3300006881	Miscanthus Rhizosphere	MESCVGSLGGASMPVVIPIRFASAEPGRKDQIVRVLQEHGIDVRRSDVAGLGELYLLRANAGLASRGAITDLLEREVPGWQDEAVFYWPE*
Ga0075424_1023505782	3300006904	Populus Rhizosphere	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLVRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0111539_115309001	3300009094	Populus Rhizosphere	TIPVVIPIRFASVDPGLRDRIVRVLKDHGVDVRRTDVDGLGDLYLLRANAGLAARGMITDLLEDHVPGWQAAVQFYWPE*
Ga0111538_120162271	3300009156	Populus Rhizosphere	MSTPDGVVRFAPEPLSGAKARGATIPVVIPIRFASVDPGLRDRIVRVLKDHGVDVRRTDVDGLGDLYLLRANAGLAARGMITDLLEDHVPGWQAAVQFYWPE*
Ga0105242_105122822	3300009176	Miscanthus Rhizosphere	VGWLGGASMPVVIPIRFASAEPGRKDQIVRVLQEHGIDVRRSDVAGLGELYLLRANAGLASRGAITDLLEREVPGWQDEAVFYWPE*
Ga0105238_115790711	3300009551	Corn Rhizosphere	RGATMAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFYWPE*
Ga0105249_111093331	3300009553	Switchgrass Rhizosphere	MPVVIPVRFASADPGRKDQIVQVLQEHGIDVRRSDVTGLGELYLLRSNAGLGARGAITDLLEREVPGWQADAKFYWPD*
Ga0105249_122632342	3300009553	Switchgrass Rhizosphere	MAVVIPIRFAGADPGRRERIVAVLRDNGIDVRRGAVDGFGELYLLRANAGLAARGTITDLLERHVPGWQAAVEFYWPE*
Ga0105249_130877912	3300009553	Switchgrass Rhizosphere	MAVVIPIRFADSDPGRRQQIVQVLQDHGHDVRRGDVQGLGELYLLRANAGLSERRTITDLLERHVPGWQTAAEFYWPD*
Ga0126307_102479271	3300009789	Serpentine Soil	MMAVVIPIRFARADAVRRERIVSVLQSHGYDVRRSDVEGLGELYLLRANAGLAARGPITDALHRHVPGWEADVDFYWPE*
Ga0126313_106205322	3300009840	Serpentine Soil	VAVVIPIRFASADPARRDRIVRVLQDHGLEVRRGAVDGLGDLYLLRANADRAARGAIADLLERHVPGWQTAVEFYWPD*
Ga0126313_109465342	3300009840	Serpentine Soil	MMAVVIPIRFGRADAVRRDRIVSVLQSHGYDVRRSDVEGLGELYLLRANAGLAARGHITEALHRHVPGWEDDVDFYWPE*
Ga0126315_100558572	3300010038	Serpentine Soil	MMAVVIPIRFARADAVRRERIVSVLQSHGYDVRRSDVEGLGELYLLRANAGLAARGPITDALHRHVPGWEADVAFYWPE*
Ga0126309_100184642	3300010039	Serpentine Soil	MAVVIPIRFGRVDRGRRERIVSVLQSHGYEVRRSDVEGLGELYLLRANAGLGARGHITEALHRHVPGWEADADFYWPE*
Ga0126312_107620022	3300010041	Serpentine Soil	MMAVVIPIRFARSDAVRRERIVSVLQSHGYDVRRSDVEGLGELYLLRAHAGLAARGHITDALHRHVPGWEADVDFYWPE*
Ga0134128_106256771	3300010373	Terrestrial Soil	MAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAA
Ga0134128_109946791	3300010373	Terrestrial Soil	MAVVIPIGFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFYWPE*
Ga0105239_134524231	3300010375	Corn Rhizosphere	MAVVIPIRFAGADPARRDQIVRVLQEHGHDVRRGDVEGLGELYLLRANAGLGARGEIADLLERHVPGWQSAAEFYWPE*
Ga0134127_128338112	3300010399	Terrestrial Soil	MAVVIPIRFASADPGRRNRIVGILRDNGIDVRRSDVQGLGVGELYLLRANAGVAARDMITDLLERHVPGWQAEAEFYWPE*
Ga0134122_118492291	3300010400	Terrestrial Soil	MAVVIPIRFESADPGRRDRIVGILRDNGIDVRRSDVQGLGVGELYLLRANAGVAARGMITDLLERHVPGWQAEAEFYWPE*
Ga0134123_101240772	3300010403	Terrestrial Soil	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0134123_105350641	3300010403	Terrestrial Soil	DDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIDDLLEDNVPGWQAAVQFYWPE*
Ga0134123_109010792	3300010403	Terrestrial Soil	MESCVGSLGGASMPVVIPIRFASAEPGRKDQIVRVLQEHGIDVRRSDVAGLGELYLLRANAGLASRGAITDLLGREVPGWQDEAVFYWPE*
Ga0105246_122326712	3300011119	Miscanthus Rhizosphere	ADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0150985_1012816461	3300012212	Avena Fatua Rhizosphere	RIGRRDRIVGVLRDHGIDVRRGAVDGLGELYLLRANAGLAARGAITDLLERHVPGWQAAVEFYWPE*
Ga0150985_1207849592	3300012212	Avena Fatua Rhizosphere	MAVVIPIRFAGADPGRRDRIVRVLRDHGIDVRRGAVDGLGELYLLRATAGLAARDAITELLERHVPGWQAAVEFYWPE*
Ga0157285_103182432	3300012897	Soil	RRERIVRVLRDNGIDVRRGAVDGFGELYLLRANAGPAARGTIIDLLERHVPGWQAAVEFSWPE*
Ga0157286_104412902	3300012908	Soil	MAVVIPIRFAGADPARRDRIVRVLKDHGMDVRRGAVEGLGELYLVRANAGLAARGTITDLLERHVPDWEAAVEFYWPD*
Ga0164300_109813542	3300012951	Soil	MAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTAVDGLGDLYLLRANTGLAARRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0164298_105581432	3300012955	Soil	MAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0164301_107034842	3300012960	Soil	MAVVPIRFASADPGRKDSIVRVLKDHGIDVRRTAVDGLGDLYLLRANTGLAARRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0164302_106775361	3300012961	Soil	MAVVIPIRFASADPGRKDSIVRVLKDHGIDVRRTAVDGLGDLYLLRANTGLAARRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0164305_102856262	3300012989	Soil	GRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0157378_130589241	3300013297	Miscanthus Rhizosphere	MAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQASVQFYWPEET*
Ga0157380_105824491	3300014326	Switchgrass Rhizosphere	MAVVIPIRFASADPERKDSIARVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQ
Ga0182001_102015571	3300014488	Soil	MMAVVIPIRFARSDAMRRERIVSVLQSHGYDVRRSDVEGLGELYLLRANAGLAARGHITDALHRHVPGWEADVDFYWPE*
Ga0157377_101332161	3300014745	Miscanthus Rhizosphere	MAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGW*
Ga0157377_104873032	3300014745	Miscanthus Rhizosphere	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRSIVDLLEDNVPGWEAAVQFYWPE*
Ga0132258_116495802	3300015371	Arabidopsis Rhizosphere	LAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVEFYWPE*
Ga0132256_1000947611	3300015372	Arabidopsis Rhizosphere	PGRKDRIVTVLQDHGIDVRRTAVEGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVEFYWPE*
Ga0132257_1021826992	3300015373	Arabidopsis Rhizosphere	LAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFYWPE*
Ga0132255_1047609201	3300015374	Arabidopsis Rhizosphere	LAVVIPIRFASADPWRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE*
Ga0163161_108181802	3300017792	Switchgrass Rhizosphere	MAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE
Ga0179591_10253073	3300024347	Vadose Zone Soil	MPVVIPIRFASADPERKDQIVRVLQEHGIDVRRSQVEGIGELYLLRANAGLASRGTIMDLLEREVPGWQAEAKFYWPD
Ga0207697_105382441	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	LSGPWARGATMAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE
Ga0207656_103375992	3300025321	Corn Rhizosphere	MAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE
Ga0207642_107760081	3300025899	Miscanthus Rhizosphere	GRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFYWPE
Ga0207710_101190702	3300025900	Switchgrass Rhizosphere	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFYWPE
Ga0207643_101878643	3300025908	Miscanthus Rhizosphere	MAVVIPIRFASADPGRRDRIVGTLRANGIDVRRSDVQGLGPGELYLLRAHAGLAARGVITDLLERHVPGWPAEAEFYWPE
Ga0207643_102022692	3300025908	Miscanthus Rhizosphere	MAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLATRRTIIDLLEDNVPGWQAAVHFYWPE
Ga0207662_100214483	3300025918	Switchgrass Rhizosphere	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWEAAVQFYWPE
Ga0207694_117997041	3300025924	Corn Rhizosphere	RGATMAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFYWPE
Ga0207650_101125901	3300025925	Switchgrass Rhizosphere	MAVVIPIRFASADPGRRDRIVGTLRANGIDVRRSDVQGLGPGELYLLRAHAGLAARGVITDLLERHVPGWQAEAEFYWPE
Ga0207644_101457041	3300025931	Switchgrass Rhizosphere	IPIRFASADPGRRDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLATRRTIIDLLEDNVPGWQAAVHFYWPE
Ga0207690_106201113	3300025932	Corn Rhizosphere	MAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQASV
Ga0207690_108931282	3300025932	Corn Rhizosphere	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFY
Ga0207686_104380101	3300025934	Miscanthus Rhizosphere	MESCVGSLGGASMPVVIPIRFASAEPGRKDQIVRVLQEHGIDVRRSDVAGLGELYLLRANAGLASRGAITDLLEREVPGWQDEAVFYWPE
Ga0207670_104220151	3300025936	Switchgrass Rhizosphere	MAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE
Ga0207669_101723792	3300025937	Miscanthus Rhizosphere	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE
Ga0207689_102092162	3300025942	Miscanthus Rhizosphere	MAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQLYWPE
Ga0207712_117503902	3300025961	Switchgrass Rhizosphere	MAVVIPIRFAGADPGRRERIVAVLRDNGIDVRRGAVDGFGELYLLRANAGLAARGTITDLLERHVPGWQ
Ga0207677_112373672	3300026023	Miscanthus Rhizosphere	MAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFY
Ga0207708_100393532	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MAVVIPIRFASADPARKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLATRRTIIDLLEDNVPGWQAAVHFYWPE
Ga0207641_124354621	3300026088	Switchgrass Rhizosphere	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWEAAV
Ga0207676_122984692	3300026095	Switchgrass Rhizosphere	RTARGGQMAVVIPIRFASADPGRRDRIVGTLRANGIDVRRSDVQGLGPGELYLLRAHAGLAARGVITDLLERHVPGWQAEAEFYWPE
Ga0207675_1005415502	3300026118	Switchgrass Rhizosphere	MAVVIPIRFAGADPGRRERIVAVLRDNGIDVRRGAVDGFGELYLLRANAGLAARGNSTDLLERHVPGWQAAVEFYWPE
Ga0207428_109715681	3300027907	Populus Rhizosphere	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLVRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE
Ga0268266_105987771	3300028379	Switchgrass Rhizosphere	MAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGW
Ga0268265_102509541	3300028380	Switchgrass Rhizosphere	TMAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE
Ga0268264_105721622	3300028381	Switchgrass Rhizosphere	MSEVVCYCFDVRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFYWPE
Ga0268264_110486251	3300028381	Switchgrass Rhizosphere	DPERKDSIVRVPKDHGIDVRRTSVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE
Ga0247828_102424823	3300028587	Soil	MAVVIPIRFASADPGRRDRIVRVLKDHGIDVRRSEVEGLGELYLLRANAGLGARGAITDLLERHVPG
Ga0247818_112678322	3300028589	Soil	WLGGASMPVVIPVRFASADPGRKDQIVQVLQEHGIDVRRSDVTGLGELYLLRSNAGLGARGAITDLLEREVPGWQADAKFYWPD
Ga0247822_108256302	3300028592	Soil	MPVVIPVRFASADPGRKDQIVQVLQEHGIDVRRSDVTGLGELYLLRSNAGLGARGAITDLLEREVPGWQADAKFYWPD
Ga0247821_104949912	3300028596	Soil	SGPWARGATMAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE
Ga0307276_100133861	3300028705	Soil	MAVVIPIRFAGADPVRRDRIVRVLRDHGIDVRRGAVEGLDELYLLRANAGLATRGAITELLERNVPGWQAAVEFYWPD
Ga0247825_101861852	3300028812	Soil	MAVVIPIRFASADPRRRDHIVNVLREHGMQVRKGAVEGLGELYLVRAQTGVAARGAIVDLLERHVPGWQAAAQFYWPE
Ga0247825_105630641	3300028812	Soil	LSAPPGRVVPFAPEPLSGPWARGATMAVVIPIRFASADPERKDSIVRVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE
Ga0247827_104240801	3300028889	Soil	ARGATMAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGWQAAVQFYWPE
Ga0247826_106775432	3300030336	Soil	MAVVIPIRFAGADPGRRERIVRVLRDNGIDVRRGAVDGFGELYLLRANAGLAARGTITDLLERHVPGWQAAVEFYWPE
Ga0247826_112175071	3300030336	Soil	MAVVIPIRFASADPGRRDRIVRVLKDHGIDVRRSEVEGLGELYLLRANAGLGARGAITDLLERHVPGWQAAVEFYWPD
Ga0307501_100374772	3300031152	Soil	MAVVIPIRFAGADPGRRERIVRVLRDNGIDVRRGAVDGFGELYLLRANAGPAARGTITDLLERHVPGWQAAVEFYWPE
Ga0307469_123348342	3300031720	Hardwood Forest Soil	TMAVVIPIRFASADPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIIDLLEDNVPGWQAAVQFYWPE
Ga0307410_101835082	3300031852	Rhizosphere	MAVVIPIRFAGADPGRRDRIVRVLRDNGIDVRRGAVDGFGELYLLRANAGLAARGPITELLERHVPGWQAAVEFYWPE
Ga0310892_102331941	3300031858	Soil	MAVVIPIRFASDDPGRKDRIVTVLKDHGIDVRRTAVDGLGDLYLLRANAGLAARRTIVDLLEDNVPGW
Ga0307409_1026604281	3300031995	Rhizosphere	MAVVIPIRFARTDTVRRERIVSVLQNHGYEVRRTDVEGLGELYLLRANAGLSARGHITDALHRHVPGWEDDVNFYWPE
Ga0307411_102137622	3300032005	Rhizosphere	MAVVIPIRFAGADPGRRDRIVRVLRDNGIDVRRGAVDGFGELYLLRANAGLAACGPITELLERHVPGWQAAVEFYWPE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052784

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences