NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F052767

Metagenome / Metatranscriptome Family F052767

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F052767
Family Type Metagenome / Metatranscriptome
Number of Sequences 142
Average Sequence Length 49 residues
Representative Sequence ARVAKLNVILDRARLEDFTVTNENRSLTEVAHEMLVKAGWISN
Number of Associated Samples 120
Number of Associated Scaffolds 142

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 4.23 %
% of genes from short scaffolds (< 2000 bps) 4.93 %
Associated GOLD sequencing projects 115
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (95.775 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(14.789 % of family members)
Environment Ontology (ENVO) Unclassified
(34.507 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(59.155 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.62%    β-sheet: 0.00%    Coil/Unstructured: 63.38%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 142 Family Scaffolds
PF13411MerR_1 4.93
PF04551GcpE 4.23
PF05163DinB 2.82
PF01909NTP_transf_2 2.82
PF01243Putative_PNPOx 2.11
PF02771Acyl-CoA_dh_N 2.11
PF01556DnaJ_C 2.11
PF01197Ribosomal_L31 2.11
PF02844GARS_N 1.41
PF00107ADH_zinc_N 1.41
PF00180Iso_dh 1.41
PF01408GFO_IDH_MocA 1.41
PF00664ABC_membrane 1.41
PF01894UPF0047 1.41
PF00072Response_reg 0.70
PF00825Ribonuclease_P 0.70
PF13030DUF3891 0.70
PF08843AbiEii 0.70
PF13277YmdB 0.70
PF13561adh_short_C2 0.70
PF14464Prok-JAB 0.70
PF01979Amidohydro_1 0.70
PF04413Glycos_transf_N 0.70
PF05235CHAD 0.70
PF06764DUF1223 0.70
PF10615DUF2470 0.70
PF13472Lipase_GDSL_2 0.70
PF00578AhpC-TSA 0.70
PF08531Bac_rhamnosid_N 0.70
PF15631Imm-NTF2-2 0.70
PF13579Glyco_trans_4_4 0.70
PF01738DLH 0.70
PF00027cNMP_binding 0.70
PF13565HTH_32 0.70
PF00135COesterase 0.70
PF13302Acetyltransf_3 0.70
PF13735tRNA_NucTran2_2 0.70
PF12631MnmE_helical 0.70
PF07238PilZ 0.70
PF00266Aminotran_5 0.70
PF13377Peripla_BP_3 0.70
PF00356LacI 0.70
PF13414TPR_11 0.70
PF08279HTH_11 0.70
PF02934GatB_N 0.70
PF00265TK 0.70
PF00082Peptidase_S8 0.70
PF02897Peptidase_S9_N 0.70
PF12704MacB_PCD 0.70
PF00121TIM 0.70
PF13442Cytochrome_CBB3 0.70
PF01902Diphthami_syn_2 0.70
PF00171Aldedh 0.70
PF00009GTP_EFTU 0.70
PF00709Adenylsucc_synt 0.70
PF07994NAD_binding_5 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 142 Family Scaffolds
COG08214-hydroxy-3-methylbut-2-enyl diphosphate synthase IspG/GcpELipid transport and metabolism [I] 4.23
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 2.82
COG0254Ribosomal protein L31Translation, ribosomal structure and biogenesis [J] 2.11
COG0484DnaJ-class molecular chaperone with C-terminal Zn finger domainPosttranslational modification, protein turnover, chaperones [O] 2.11
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 2.11
COG0151Phosphoribosylamine-glycine ligaseNucleotide transport and metabolism [F] 1.41
COG0432Thiamin phosphate synthase YjbQ, UPF0047 familyCoenzyme transport and metabolism [H] 1.41
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.70
COG0064Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunitTranslation, ribosomal structure and biogenesis [J] 0.70
COG0104Adenylosuccinate synthaseNucleotide transport and metabolism [F] 0.70
COG0149Triosephosphate isomeraseCarbohydrate transport and metabolism [G] 0.70
COG0594RNase P protein componentTranslation, ribosomal structure and biogenesis [J] 0.70
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.70
COG1260Myo-inositol-1-phosphate synthaseLipid transport and metabolism [I] 0.70
COG1435Thymidine kinaseNucleotide transport and metabolism [F] 0.70
COG1505Prolyl endopeptidase PreP, S9A serine peptidase familyAmino acid transport and metabolism [E] 0.70
COG15193-deoxy-D-manno-octulosonic-acid transferaseCell wall/membrane/envelope biogenesis [M] 0.70
COG1770Protease IIAmino acid transport and metabolism [E] 0.70
COG2102Diphthamide synthase (EF-2-diphthine--ammonia ligase)Translation, ribosomal structure and biogenesis [J] 0.70
COG2253Predicted nucleotidyltransferase component of viral defense systemDefense mechanisms [V] 0.70
COG2272Carboxylesterase type BLipid transport and metabolism [I] 0.70
COG2511Archaeal Glu-tRNAGln amidotransferase subunit E, contains GAD domainTranslation, ribosomal structure and biogenesis [J] 0.70
COG3025Inorganic triphosphatase YgiF, contains CYTH and CHAD domainsInorganic ion transport and metabolism [P] 0.70
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.70
COG5429Uncharacterized conserved protein, DUF1223 domainFunction unknown [S] 0.70
COG5607CHAD domain, binds inorganic polyphosphatesFunction unknown [S] 0.70


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A95.77 %
All OrganismsrootAll Organisms4.23 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005530|Ga0070679_101509055Not Available619Open in IMG/M
3300010361|Ga0126378_11981505Not Available663Open in IMG/M
3300014501|Ga0182024_10005560All Organisms → cellular organisms → Bacteria28204Open in IMG/M
3300020579|Ga0210407_10383639All Organisms → cellular organisms → Bacteria → Acidobacteria1099Open in IMG/M
3300021170|Ga0210400_10154343All Organisms → cellular organisms → Bacteria1850Open in IMG/M
3300026552|Ga0209577_10514734All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300029999|Ga0311339_11076357All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300031261|Ga0302140_11058207All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium553Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.79%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.86%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa8.45%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.75%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil5.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.63%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.93%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil4.23%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.23%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.52%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.82%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.11%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.11%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.41%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.41%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.41%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.41%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.41%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.70%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.70%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.70%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.70%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.70%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.70%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.70%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.70%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.70%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.70%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.70%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.70%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.70%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.70%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.70%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.70%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.70%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.70%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001652Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040EnvironmentalOpen in IMG/M
3300003352Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009624Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300011071Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 42 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012089Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaGHost-AssociatedOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022881Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026374Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-AEnvironmentalOpen in IMG/M
3300026489Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-AEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026928Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 44 (SPAdes)EnvironmentalOpen in IMG/M
3300027376Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027575Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027662Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027663Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027692Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027698Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027737Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300029993Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031261Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031837Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20274J16320_10276323300001652Forest SoilVKMRESGALQLEYVARVAKLNAILDRAQLEDFRVTNENHALNEVAHELLVKAGWIPR*
JGI26345J50200_102090923300003352Bog Forest SoilVRVAKLNAVLDVAKLEDFTITNENRSVTEVAQEMLVKAGWISL*
Ga0066672_1099133713300005167SoilTASLELMEQRIRTRESGLLRQQYVTRVAKLNAILREARLEDFTVINENRSLTDVAKEMLVKACWIRS*
Ga0070660_10095520913300005339Corn RhizosphereARVPELNAILDRAQLDDFAIVNENRSLTDVALEMLVKAGWISK*
Ga0070710_1053507513300005437Corn, Switchgrass And Miscanthus RhizosphereSQREYVARVAELNVILDRAQLEDFAVGNENRSLTDVALEMLVKAGWV*
Ga0070711_10095936743300005439Corn, Switchgrass And Miscanthus RhizosphereASKREYVARVAELEVILDRARLEDFTITSENRSPTDAAYEMLVKTGWISNCPTTR*
Ga0066681_1095620013300005451SoilREYVARVAELNAILDRARLEDFIITTENRSPTDAARETLVRAGWIAN*
Ga0066687_1021972543300005454SoilMVRDWGVSRRDYVARVAELNAILDRAQLENFTITNENRSLTDVAHELLAKAG
Ga0068867_10110942013300005459Miscanthus RhizosphereQREYVARVPELNAILDRAQLDDFAIVNENRSLTDVALEMLVKAGWISK*
Ga0070679_10150905523300005530Corn RhizosphereIEAMEQRVRLRESGISQRNYVARVAKLNTIIDRTQLETFTITNENRPLTDVAHEMLLKAGWISK*
Ga0066707_1086340123300005556SoilNDILDRARLEDFAVTNENRSLTDVALEMLVKAGWISN*
Ga0066702_1062645413300005575SoilMVRDWGVSRRDYVARVAELNAILDRAQLENFTITNENRSLTDVAHELLAKAGWISNS*
Ga0070761_1041586113300005591SoilNVILDRARLEDFSISSENRSITEIAREMLVRGGWISM*
Ga0070762_1120990223300005602SoilLDRARLEDFTISNENRSLSEVAYEMLLKAGWISD*
Ga0081540_133796823300005983Tabebuia Heterophylla RhizosphereMRESGKSQQAFVARVAKFNGILDRARLENFTVTNENRSVNEVALEMLIKAGWISN*
Ga0070717_1021149933300006028Corn, Switchgrass And Miscanthus RhizosphereRVAKLNTILDRSRLENFTITNENRQLTDVAHELLVKAGWISK*
Ga0075017_10065175823300006059WatershedsQRVKKRESGMLQQNFVDRVMKLNAILDRARLEDFIVANENRPLTEVAREMLVRAGWTAAS
Ga0075015_10014115233300006102WatershedsLNVILDRARLEDFAVANENRSLTDVALEMLVKAGWIAE*
Ga0075014_10073858523300006174WatershedsEYVARVAKLNVILDRARLEDFTVTNERRSLTEVAHEMLAKAGWISN*
Ga0075014_10081500713300006174WatershedsRIKKRESGVSQQEYVTRVEPLNVILDRACLEDFTVTNENRSVTEVAHEMLIKAKWISS*
Ga0079220_1120009413300006806Agricultural SoilAELNTILDRVRLEDFTVANEARSLTDVALEVLVKAGWISN*
Ga0099829_1013699633300009038Vadose Zone SoilQREYVARVEKLNVILDRAQLEDFTVTNENRSLTDVALEMLIKAGWISN*
Ga0099829_1056894613300009038Vadose Zone SoilILDRAQLEDFAVTNEDRSLTEVAIEVLVQAGWISS*
Ga0099830_1147769113300009088Vadose Zone SoilMRESGVSQREYVARVAKLNVILDRAQLEDFTVTNENRSLTDVALEMLIKAGWISN*
Ga0099828_1189198013300009089Vadose Zone SoilLDRARLEDFTVTNENRSLTEVAHEMLVKAGWISN*
Ga0066709_10052826313300009137Grasslands SoilQRKYVARVSDLNALLDRVRLEDFSVPNEHRPVCEVAQEMLTKAGWISE*
Ga0105241_1016266733300009174Corn RhizosphereLDDILDRARLEDFVVINEGRSIDDVAQEMLIKAGWISGW*
Ga0116105_107782023300009624PeatlandVSQRDYVARVAKLNAILDDAQLEDFTVINEDRPLTEVAIELLVKAGWISK*
Ga0116215_105912143300009672Peatlands SoilDLGMSQREYVARVAKLNFILDRAQFEDFAVTNEDRSLTEVAFEMLVQAGWISN*
Ga0126374_1004556913300009792Tropical Forest SoilTPSAISTPSNTRESGILQQQFVARVGELNSILDRAHLEDFTVNENRPLNEVALEVLLKTRWIRN*
Ga0074044_1070159623300010343Bog Forest SoilMRESGVSQGDYVARVAKLNAILDRARLEDFTVTNENRSLTEVANEMLVQAGWISR*
Ga0074044_1071181923300010343Bog Forest SoilKLNAVLDVAKLEDFTITNENRSVTEVAQEMLVKAGWISL*
Ga0126376_1089555713300010359Tropical Forest SoilTRELGLLQREYVTRVSKLNVVLDDTRLDDFNVINENRSLTDVAQEILVKAGWISN*
Ga0126378_1198150523300010361Tropical Forest SoilVKLRESGISRRDYIARVAELNAILDREQLENFTITNENRRLTDVAHELLVKAGWISDRQATGFEPL*
Ga0126379_1263115123300010366Tropical Forest SoilQRRVKVRESGVLQQEFVARVAELNSTLDRARLENFAISNENRPLNEVAFEILLQAGWI*
Ga0136449_10032948123300010379Peatlands SoilMRDLGISQREYLARVAKLNGILDRAQLEDFAVLNEDRSLTEVALQMLVRAGWISS*
Ga0136449_10136788613300010379Peatlands SoilAKLNDILDRARVEDFRIPNENRPLSDVAYEMLLKAGWISERSTDDFEKL*
Ga0136449_10374419523300010379Peatlands SoilILDRARLEDFTVANENRPLTDVALEMLVKAGWIST*
Ga0134124_1229267333300010397Terrestrial SoilMLQADFVARVAELNAILDRASLEDFNVTNDSRSVNDVALEMLLKAGWISS*
Ga0138595_113217623300011071Peatlands SoilARVAKLNFILDRAQFEDFAVTNEDRSLTEVAFEMLVQAGWISN*
Ga0137393_1000507913300011271Vadose Zone SoilVILDRARLEDFTVTNENRSLTEVAHEMLVKAGWISN*
Ga0137393_1020106433300011271Vadose Zone SoilSQREYVARVEELNAVLDRVRLEDFTVSNENRSLTDVATEVLIKAGWISG*
Ga0153924_111010423300012089Attine Ant Fungus GardensARVAKLNAILDRVQLEDFSVANEDRSLTEVALETLVKAGWISN*
Ga0137388_1091361113300012189Vadose Zone SoilAKLNAILDRARLEDFTVTNENRSLTEAALEVLVKAGWISS*
Ga0137379_1096961713300012209Vadose Zone SoilKLNPLLDRAQLEDFAVRNEDRPLTEVAIDVLVQAGWIST*
Ga0137390_1005490943300012363Vadose Zone SoilRVAELNVILDRARLEDFTVTNENRSLTEVAYEMLVKAGWISNKPATKP*
Ga0137359_1002694053300012923Vadose Zone SoilARVAKLNVILDRARLEDFTITNEKRSLTEVAHEMLVKARWISTDPLPEV*
Ga0137413_1076403813300012924Vadose Zone SoilKLNSILDRAQLEDFAVATDARSVTEIAQEMLLRAGWISDLSR*
Ga0126369_1097319813300012971Tropical Forest SoilMEQRVKQRESGVSRGEYIARVAKLNSILDRAHLENFTITNENRQLTDVAHELLVKAGWISN*
Ga0126369_1328325323300012971Tropical Forest SoilEFVARVAELNSILDRAQLEDFTIFNENRPLNEVAFEMLRQAGWI*
Ga0181517_1024527723300014160BogAILDDAQLEDFTVINEDRPLTEVAIELLVKAGWISK*
Ga0134079_1014570323300014166Grasslands SoilKARESGPSQQEFVARVAELNSILDRARLEDFTVTNENRPLNEVALEVLLNAGWISN*
Ga0182024_10005560123300014501PermafrostMVAKLNVILDCARLEDFAVVNENRSLTDVALEMLARAGWISN*
Ga0181522_1082352623300014657BogEIMKRRVMTREAGISQQDYVARVEELNAILDQAHLEDFSVVNENRSLADVAFEMLVTAGWISN*
Ga0137420_105382913300015054Vadose Zone SoilLDRAGLEDFAVTNENRSLNDVALEMLIKAGWISN*
Ga0182037_1149044813300016404SoilRVEELSTVLDASALEDFVIINENRSVTEVAREMLMRAGWL
Ga0187819_1035056213300017943Freshwater SedimentRVQMRESGVLQRKYVARIAKLNVILDRAQLEDFTVTNDNRSLTEVAQEMLVKAGWISN
Ga0187879_1051265623300017946PeatlandVARVSELSAILDRARLEDFAVVNENRTLTDVALEMLDKAGWISGSIPAV
Ga0187769_1004779933300018086Tropical PeatlandKLNAILDDARLEDFTIANDYGPLAEVAHEMLMKAGWISS
Ga0193728_113652623300019890SoilSGVLQRKYVARIAELNAILDRARLEDFTITSENPSLTVVAHEMLVKAGWISK
Ga0210407_1038363913300020579SoilMETMKRRVQLRDLGVSQREYVDRVAKLDVILDRARLEDFAVTNENRSLTDVALEMLVKARWISN
Ga0210407_1046950213300020579SoilSQREYVARVARLNDMLDRARLEDFAISNENRPLSEVGYEMLLKAGWISEGPTDNLEKM
Ga0210403_1114053513300020580SoilYVARVAELNIVLDRVRLEDFSLASENRSLTEVAHEILVTAGWISN
Ga0210403_1135304223300020580SoilVARVATLNAILDRAHLEDFTVTSEDRSVTEVANEMLIKAGWISS
Ga0210399_1045891813300020581SoilLNAILDSAHLEDFTVSNEDRSLTEVALEMLVKARWITN
Ga0210404_1075336523300021088SoilAVLDRACLEDFTITNENRSVTEVAYEMLFKAKWISS
Ga0210406_1009399953300021168SoilTANVERVAKLNAILDSAHLEDFTVSNEDRSLTEVALEMLVKARWITN
Ga0210406_1051383913300021168SoilRVQLRDLGVSQREYVDRVAKLDVILDRARLEDFAVTNENRSLTDVALEMLVKARWISN
Ga0210406_1128815823300021168SoilLNVILDRARLEDFTISNENRSVSEVAHEMLLKVGWISD
Ga0210400_1015434313300021170SoilASIETMEQRVRLRESGISQRDYVARVAELNTILDRAQLENFTVTNENRPLTDVAHELLVKAGWISN
Ga0210400_1139177413300021170SoilNVILDRARLEDFTVTNENRSLTEVAHEMLVKAGWISN
Ga0210405_1134387223300021171SoilESGVSQREYVARVAELNVILDRARLENFAVASEGRSLTEVAHEMLLRAGWISN
Ga0210392_1135362713300021475SoilKLNAILDSAHLEDFTVSNEDRSLTEVALEMLVKARWITN
Ga0210402_1089752733300021478SoilGYRTANVERVAKLNAILDSAHLEDFTVSNEDRSLTEVALEMLVKARWITN
Ga0210410_1057107423300021479SoilQRDYVARVAKLNVILDRARLEDFTVTSDNRPPTEIAQEMLIKAGWISS
Ga0126371_1154856413300021560Tropical Forest SoilRALDRARLEDFTVSNENRSVTDVALEVLVKAGWISN
Ga0242655_1019279513300022532SoilKLNVILDRARLEDFTVTSDNRPPTEIAQEMLIKAGWISS
Ga0224545_102381223300022881SoilMVAKLNVILDCARLEDFAVVNENRSLTDVALEMLARAGWISN
Ga0207657_1091306223300025919Corn RhizosphereEYVARVPELNAILDRAQLDDFAIVNENRSLTDVALEMLVKAGWISK
Ga0207698_1225261313300026142Corn RhizosphereRVPELNALLDRAQLDDFAIVNENRSLTDVALEMLVKAGWISK
Ga0209239_119445113300026310Grasslands SoilQEFAARVAELNSILDRARLEDFTVANENRPLNEVAIEVLLKAGWISN
Ga0209686_112830313300026315SoilRTRESGLLRQQYVTRAAKLNAILDEARLEDFTVINENRSLTDVAKEMLVKACWIRS
Ga0209473_105433613300026330SoilKARESGLLQEQYVDRVAKLNAILDDAKLEDLTVINENRSLTDVAHEVLVRAGWISS
Ga0257146_103756113300026374SoilSQEEYVARVAKLNAILDQARLQDFTISSENRSLTDVAHEMLVKAGWISN
Ga0257160_105879023300026489SoilDRAALEDFTIINENRSLSDIAQEMLIKAGWISAETRV
Ga0257168_116113923300026514SoilLNVILDRVRLEDFTITNENRSLTEVAHEMLVKALWIMSPDIALEGK
Ga0209577_1021200923300026552SoilMEQRVMVRDWGVSRRDYVARVAELNAILDRAQLENFTITNENRSLTDVAHELLAKAGWISNS
Ga0209577_1051473423300026552SoilQQRVQMRESGVSQGQYVARVAKLNALLDRARLEDFTVSSEGRPLTDVALEMLVKAAWISN
Ga0179587_1020308323300026557Vadose Zone SoilNLNVILDRARLEDFTVTNENRSLTEVAQEMLVKAGWISSGPAIKP
Ga0207779_101874833300026928Tropical Forest SoilILDQAQLEDFRVSNESRSVTDVALEMLTRARWIGAFGQ
Ga0209004_102709123300027376Forest SoilAILDRAHLEDFAVINEGRSINDVAQEMLIKAGWISDW
Ga0209735_102136313300027562Forest SoilTREAGVAQRKYVVRVAELNVILDCARLEDFTVTNENRSLTEVAHEVLVKAGWISN
Ga0209735_114337023300027562Forest SoilESGVSRREYVARVAKLNAILDRARLEDFTVTNENRSLTEVAHEMLVKAGWISN
Ga0209525_101615013300027575Forest SoilNVILDRAQLEDFAVTNENRPLTDVALEILVKAGWISN
Ga0208565_122739313300027662Peatlands SoilARVAKLNFILDRAQFEDFAVTNEDRSLTEVAFEMLVQAGWISN
Ga0208990_113924623300027663Forest SoilQLRDLGVSQQEYVDRVAKLNVILDRAHLEDFAVTNENRPLTDVALEMLVKAGWISN
Ga0209530_109154523300027692Forest SoilVNAILDGAQLEDFAVVNEDRPLTEVALEMLQKAGWIAN
Ga0209446_107043323300027698Bog Forest SoilMKRRVQMRDLGISQREYVTRVERLNVILNRTQLEDFAVTNENRSLTDVALEILVKAGWIP
Ga0209328_1007795333300027727Forest SoilLDFFLDHAKLEDFIVVNENRTVSEVANEVLVKAGWISIDA
Ga0209038_1011475113300027737Bog Forest SoilARVAKLNNILDRAQLEDFSIANEDRSLTEVAHEMLVKAAWISD
Ga0209655_1002256113300027767Bog Forest SoilVARVAELNTILERAQLENFTITNENRPLTDVAHELLVKAGWISS
Ga0209655_1025022613300027767Bog Forest SoilRESGISQREYVARVAKLNLILDRARLEDFSISSENRSITEVAHETLVRAGWISM
Ga0209773_1004180213300027829Bog Forest SoilVARVAKLNDILDRARLEDFSIANEDGSLTEAAHEMLVMAGWIPD
Ga0209580_1021095333300027842Surface SoilIRLRESGVSQQNYTARVAKLNTIIDRANLENFTTTNENRPLTDVAREMLLKAGWISS
Ga0209275_1076087423300027884SoilHEYVARVRILNTILDRAHLEDFRVTSENRSVSDVALEMLVKAEWMAD
Ga0209380_1048332113300027889SoilEKGISRRQYIARVAKLNVILDRARLEDFTVINEHRSLTDVALEMLVKAGWISN
Ga0209067_1070823513300027898WatershedsEYIARVAKLNVILDRGRLEDFTVINENRSLTEVALEMLTKAGWISN
Ga0209488_1056999213300027903Vadose Zone SoilGVSRQEYVARVAKLNAILDGAHLEDFSVSSENGSLTEIAHEILLKARWISN
Ga0209415_1013081713300027905Peatlands SoilIRDLGISQREYVARVAKLNVILDRAQLEDFAVTNENRSLTDVALEMLAKAGWISN
Ga0209006_1095324423300027908Forest SoilSGVLRGNYVARVAKLNTILERAQLENFTITNENRQLNEVAHELLLKAGWISN
Ga0209526_1006040233300028047Forest SoilAKLNVILDRARLEDFTVTNENRSLTEVANEMLVKAGWISNLPSTKP
Ga0209526_1035122113300028047Forest SoilARVAKLNVILDRARLEDFTVTNENRSLTEVAHEMLVKAGWISN
Ga0222749_1008687023300029636SoilRVKIRESGVLQREYVARVAELNVILDCARLEDFTVASEDRRLTEVAHEMLLKAGWISNGHATWT
Ga0311371_1253813613300029951PalsaKRRVEMRDLGMLQHEYVARVAKLNLILDRAGLENFAVVNDQRSLTDVAYEMLVKAGWISN
Ga0302304_1013298913300029993PalsaVATLNVILDRAQLEGFTVTNENRSLTDVALEMLIKAGWISS
Ga0311339_1107635713300029999PalsaAGLEVMEQRVRLRESGVSHRNYVARVAKLNTVIDRAHLENFTITNENRPLTDVAQEMLLKAGWISN
Ga0311353_1099114723300030399PalsaQQRVKVRESGVSQQEYVARVAPLNAILDRARLEDFTVINENRSLTDVALEMLVKAGWTSN
Ga0311353_1164840123300030399PalsaSGVSHRNYVARVAKLNTVIDRAHLENFTITNENRPLTDVAQEMLLKAGWISN
Ga0311370_1056754743300030503PalsaVSRGNYVARVAKLNTILERAQLENFAITNENRQLNEVAHELLLKAGWISN
Ga0311372_1250254523300030520PalsaQMRESGIWQREYIARVAKLNSILDRAQLEDFAVTNEDRPLTEVAVELLVRAGWISN
Ga0311357_1040284313300030524PalsaLGIRQRKYIARVANLNSILDRAQLEDFAVTNEDRPLTEVAVEMLVRAGWISN
Ga0311355_1109208223300030580PalsaMLQHEYVARVAKLNLILDRARLENFAVVNEQRSLTDVAYEMLVKAGWISN
Ga0311356_1148031513300030617PalsaLNLILDRARLENFAVLNEQRSLTDVAYEMLVKAGWISN
Ga0265760_1023816123300031090SoilESGVSRGNYVARVAKLNTILERAQLENFTVSNEDRQLNDVAHELLLKAGWISN
Ga0302324_10056233413300031236PalsaRESGVSRGNYVARVAKLNTILERAQLENFAITNENRQLNEVAHELLLKAGWISN
Ga0302140_1105820713300031261BogAKLNAMIDRAGIEDFTVANENRPLTDVAGEMLIKAGWISN
Ga0310686_10915456113300031708SoilEAGISQHEYVARVATLNAILDRAHLEEFSVSSENRSVSDVAREMLVKAKWIAD
Ga0307474_1008044213300031718Hardwood Forest SoilQRVRTRESGVSQRAYVARVAELNIILDRARLEDFSLASENRPLTEVAHEMLVTAGWISN
Ga0307475_1058089023300031754Hardwood Forest SoilRDSGTLQQKYVERVAELNAMLDRAQLEDFSIVNENRSITDVAQEMLTRAGWL
Ga0307475_1122996313300031754Hardwood Forest SoilVSQRGYVARVAKLNVILDRARLEDFTVTNENRSLTEVAHEMLAKAGWISS
Ga0302315_1040060913300031837PalsaMQQRVNMREIGISQREYVARVAKLNDILDREQLEDFRVTNENRSLTDVALEMLAEAGWIS
Ga0307479_1099425313300031962Hardwood Forest SoilAARVEELNVILDRARLEDFTIISENRLPTEVAQEMLVKARWLSD
Ga0307479_1218381923300031962Hardwood Forest SoilRKYVARVAELNVILDCVRLEDFTVTNENRSLTEVAHEMLVKAGWISN
Ga0311301_1128271023300032160Peatlands SoilMRDLGISQREYLARVAKLNGILDRAQLEDFAVLNEDRSLTEVALQMLVRAGWISS
Ga0307471_10250952113300032180Hardwood Forest SoilSILDRARLEDFAVANENRPLSEVALEVLQKAGWISY
Ga0335079_1022781433300032783SoilMEQRVRTRESGIARTGYIARVAELNGILDRARLENFTGNSENRSVTELAREMLTR
Ga0335079_1093014623300032783SoilVLQREYVARVAKLNVILDRAQLEDFTVTSESRSLTDVAHEMLVKAGWISS
Ga0335080_10004075123300032828SoilVVCRLIAGVETMRQRVKMRESGMLQGEFVARVEELNGVLERAQLEDFIVENENRSLTSVALEVLVKAGLISN
Ga0335080_1201238813300032828SoilNAILDCAALEDFTVVNENRSLSEVALEMLSKAGWIAGENTISS
Ga0310914_1134993113300033289SoilLERAQLESFTITNENRRLTEVANELLVKAGWISAYQGGPH
Ga0370515_0014602_3487_36543300034163Untreated Peat SoilLRESGVSQREYVARVAELNTILDRAQLENFTIINENRPLTDVAHELLVKAGWISN
Ga0370515_0087561_1_1833300034163Untreated Peat SoilQQRVASRESGMLQHEFVARVAELNAILGRAVLEDFTVVNESRSLTEVALEMLVEAGWISH


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.