Metagenome / Metatranscriptome Family F052745

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F052745
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	81 residues
Representative Sequence	MSERAREFLEHWVSDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQCMLATLSAAAARTKQTADLD
Number of Associated Samples	92
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.46 %
% of genes near scaffold ends (potentially truncated)	23.24 %
% of genes from short scaffolds (< 2000 bps)	78.87 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (63.380 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.169 % of family members)
Environment Ontology (ENVO)	Unclassified (44.366 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.239 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.26% β-sheet: 0.00% Coil/Unstructured: 40.74%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
f.61.1.1: Multidrug and toxic compound extrusion (MATE) transporters	d3mkua_	3mku	0.64114
a.100.1.6: Glycerol-3-phosphate dehydrogenase	d1evya1	1evy	0.63027
f.57.1.1: MgtE membrane domain-like	d2zy9a3	2zy9	0.62119
a.100.1.0: automated matches	d6pypa2	6pyp	0.61367
e.7.1.1: Inositol monophosphatase/fructose-1,6-bisphosphatase-like	d1jp4a_	1jp4	0.59828

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF12071	DUF3551	23.94
PF01381	HTH_3	4.23
PF08240	ADH_N	2.11
PF13602	ADH_zinc_N_2	2.11
PF00106	adh_short	0.70
PF00535	Glycos_transf_2	0.70
PF01053	Cys_Met_Meta_PP	0.70
PF00990	GGDEF	0.70
PF08402	TOBE_2	0.70
PF03480	DctP	0.70
PF00563	EAL	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.70
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.70
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.70
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.70
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.70
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.70
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.70
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.70
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.70
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.70
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.70
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.70
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.70
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.70
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.38 %
Unclassified	root	N/A	36.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.38 %
Unclassified	root	N/A	36.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.38 %
Unclassified	root	N/A	36.62 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	62.68 %
Unclassified	root	N/A	36.62 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.70 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	59.86 %
Unclassified	root	N/A	36.62 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28.87 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	9.15 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.82 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	9.15 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	8.45 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	8.45 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01CQWCM	Not Available	507	Open in IMG/M
3300000567\|JGI12270J11330_10014904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5001	Open in IMG/M
3300001593\|JGI12635J15846_10029891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4368	Open in IMG/M
3300005435\|Ga0070714_100874918	Not Available	872	Open in IMG/M
3300005436\|Ga0070713_100401759	Not Available	1280	Open in IMG/M
3300005538\|Ga0070731_10049676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2796	Open in IMG/M
3300005538\|Ga0070731_11166607	Not Available	509	Open in IMG/M
3300005542\|Ga0070732_10000358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30593	Open in IMG/M
3300005542\|Ga0070732_10496729	Not Available	739	Open in IMG/M
3300005591\|Ga0070761_10015008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4313	Open in IMG/M
3300005602\|Ga0070762_10039458	Not Available	2563	Open in IMG/M
3300005602\|Ga0070762_10125797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1511	Open in IMG/M
3300005602\|Ga0070762_10430893	Not Available	854	Open in IMG/M
3300005610\|Ga0070763_10095176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1494	Open in IMG/M
3300005610\|Ga0070763_10704392	Not Available	592	Open in IMG/M
3300005712\|Ga0070764_10078555	All Organisms → cellular organisms → Bacteria → Proteobacteria	1734	Open in IMG/M
3300005921\|Ga0070766_10009500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4971	Open in IMG/M
3300005921\|Ga0070766_10134155	Not Available	1500	Open in IMG/M
3300005921\|Ga0070766_10344633	Not Available	966	Open in IMG/M
3300005921\|Ga0070766_10481299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300005921\|Ga0070766_11311765	Not Available	502	Open in IMG/M
3300006059\|Ga0075017_100210771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1409	Open in IMG/M
3300006175\|Ga0070712_101137060	Not Available	678	Open in IMG/M
3300006176\|Ga0070765_100101285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2490	Open in IMG/M
3300006176\|Ga0070765_100144123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2118	Open in IMG/M
3300006176\|Ga0070765_100219256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1734	Open in IMG/M
3300006176\|Ga0070765_100302995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1477	Open in IMG/M
3300006176\|Ga0070765_100383934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1309	Open in IMG/M
3300006893\|Ga0073928_10272148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1285	Open in IMG/M
3300006893\|Ga0073928_10774019	Not Available	665	Open in IMG/M
3300009523\|Ga0116221_1010070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5532	Open in IMG/M
3300010379\|Ga0136449_100743053	Not Available	1635	Open in IMG/M
3300010379\|Ga0136449_102286040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300010880\|Ga0126350_10944635	Not Available	544	Open in IMG/M
3300011120\|Ga0150983_14810723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300014165\|Ga0181523_10488982	Not Available	680	Open in IMG/M
3300014199\|Ga0181535_10696007	Not Available	579	Open in IMG/M
3300014200\|Ga0181526_10647138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300014489\|Ga0182018_10140117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1388	Open in IMG/M
3300014489\|Ga0182018_10422779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	711	Open in IMG/M
3300014657\|Ga0181522_10066889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2040	Open in IMG/M
3300017975\|Ga0187782_10196743	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1508	Open in IMG/M
3300018019\|Ga0187874_10203821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	821	Open in IMG/M
3300019888\|Ga0193751_1014300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4074	Open in IMG/M
3300020021\|Ga0193726_1000242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	71505	Open in IMG/M
3300020581\|Ga0210399_10778514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300020581\|Ga0210399_11603681	Not Available	502	Open in IMG/M
3300020582\|Ga0210395_10000522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	30121	Open in IMG/M
3300020582\|Ga0210395_10488652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	926	Open in IMG/M
3300020582\|Ga0210395_11156987	Not Available	570	Open in IMG/M
3300020583\|Ga0210401_10207991	All Organisms → cellular organisms → Bacteria → Proteobacteria	1814	Open in IMG/M
3300020583\|Ga0210401_10487043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1096	Open in IMG/M
3300020583\|Ga0210401_10915825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300021088\|Ga0210404_10088136	All Organisms → cellular organisms → Bacteria → Proteobacteria	1543	Open in IMG/M
3300021170\|Ga0210400_11404790	Not Available	556	Open in IMG/M
3300021171\|Ga0210405_10001181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	31215	Open in IMG/M
3300021171\|Ga0210405_10172346	Not Available	1714	Open in IMG/M
3300021171\|Ga0210405_10507311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	945	Open in IMG/M
3300021178\|Ga0210408_10239292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1445	Open in IMG/M
3300021178\|Ga0210408_10853163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	711	Open in IMG/M
3300021181\|Ga0210388_10864039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	781	Open in IMG/M
3300021181\|Ga0210388_11393520	Not Available	589	Open in IMG/M
3300021181\|Ga0210388_11623107	Not Available	537	Open in IMG/M
3300021401\|Ga0210393_10177191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1720	Open in IMG/M
3300021401\|Ga0210393_10211697	Not Available	1569	Open in IMG/M
3300021402\|Ga0210385_11501053	Not Available	515	Open in IMG/M
3300021404\|Ga0210389_10152321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1794	Open in IMG/M
3300021404\|Ga0210389_10379943	Not Available	1110	Open in IMG/M
3300021404\|Ga0210389_10634465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	839	Open in IMG/M
3300021406\|Ga0210386_10454611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1106	Open in IMG/M
3300021407\|Ga0210383_10168313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1868	Open in IMG/M
3300021420\|Ga0210394_10343375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1311	Open in IMG/M
3300021432\|Ga0210384_10277243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1510	Open in IMG/M
3300021474\|Ga0210390_10348372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1254	Open in IMG/M
3300021474\|Ga0210390_10361306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1228	Open in IMG/M
3300021474\|Ga0210390_11193167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	615	Open in IMG/M
3300021475\|Ga0210392_10201092	Not Available	1391	Open in IMG/M
3300021475\|Ga0210392_10651674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300021477\|Ga0210398_10112457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2211	Open in IMG/M
3300021477\|Ga0210398_10734051	Not Available	798	Open in IMG/M
3300021860\|Ga0213851_1721688	Not Available	708	Open in IMG/M
3300022522\|Ga0242659_1034299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300022557\|Ga0212123_10526655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	761	Open in IMG/M
3300023259\|Ga0224551_1058311	Not Available	673	Open in IMG/M
3300027029\|Ga0208731_1018324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	746	Open in IMG/M
3300027090\|Ga0208604_1000413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5679	Open in IMG/M
3300027096\|Ga0208099_1054181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300027370\|Ga0209010_1001146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6958	Open in IMG/M
3300027567\|Ga0209115_1004485	Not Available	2777	Open in IMG/M
3300027568\|Ga0208042_1170445	Not Available	542	Open in IMG/M
3300027570\|Ga0208043_1133300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300027635\|Ga0209625_1033315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1148	Open in IMG/M
3300027678\|Ga0209011_1039460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1474	Open in IMG/M
3300027842\|Ga0209580_10000001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1658941	Open in IMG/M
3300027842\|Ga0209580_10648472	Not Available	522	Open in IMG/M
3300027853\|Ga0209274_10082685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1565	Open in IMG/M
3300027855\|Ga0209693_10012650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3979	Open in IMG/M
3300027855\|Ga0209693_10019179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3284	Open in IMG/M
3300027855\|Ga0209693_10094665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1477	Open in IMG/M
3300027855\|Ga0209693_10389924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300027869\|Ga0209579_10034123	Not Available	2763	Open in IMG/M
3300027884\|Ga0209275_10862115	Not Available	522	Open in IMG/M
3300027889\|Ga0209380_10033651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2895	Open in IMG/M
3300027889\|Ga0209380_10135591	Not Available	1436	Open in IMG/M
3300027889\|Ga0209380_10137564	Not Available	1425	Open in IMG/M
3300027889\|Ga0209380_10158856	Not Available	1323	Open in IMG/M
3300027895\|Ga0209624_10204387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1312	Open in IMG/M
3300028047\|Ga0209526_10083522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	2249	Open in IMG/M
3300028906\|Ga0308309_10055524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2879	Open in IMG/M
3300028906\|Ga0308309_10075525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	2529	Open in IMG/M
3300028906\|Ga0308309_10357005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1247	Open in IMG/M
3300028906\|Ga0308309_10525173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1024	Open in IMG/M
3300028906\|Ga0308309_10820658	Not Available	808	Open in IMG/M
3300028906\|Ga0308309_10868341	Not Available	783	Open in IMG/M
3300028906\|Ga0308309_11158333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300028906\|Ga0308309_11168756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300029636\|Ga0222749_10709977	Not Available	550	Open in IMG/M
3300030763\|Ga0265763_1002051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1510	Open in IMG/M
3300030847\|Ga0075405_12118355	Not Available	1069	Open in IMG/M
3300030862\|Ga0265753_1120637	Not Available	549	Open in IMG/M
3300030862\|Ga0265753_1145819	Not Available	509	Open in IMG/M
3300030878\|Ga0265770_1088403	Not Available	615	Open in IMG/M
3300030945\|Ga0075373_11584648	Not Available	535	Open in IMG/M
3300031018\|Ga0265773_1005479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	925	Open in IMG/M
3300031090\|Ga0265760_10183586	Not Available	700	Open in IMG/M
3300031238\|Ga0265332_10097822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1239	Open in IMG/M
3300031344\|Ga0265316_11134122	Not Available	542	Open in IMG/M
3300031446\|Ga0170820_11852950	Not Available	559	Open in IMG/M
3300031446\|Ga0170820_12529933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1834	Open in IMG/M
3300031474\|Ga0170818_112261600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1837	Open in IMG/M
3300031595\|Ga0265313_10330182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300031715\|Ga0307476_10000446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	32856	Open in IMG/M
3300031718\|Ga0307474_10499895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	953	Open in IMG/M
3300031753\|Ga0307477_11047613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300031823\|Ga0307478_10728361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	831	Open in IMG/M
3300031859\|Ga0318527_10142146	Not Available	1004	Open in IMG/M
3300032160\|Ga0311301_10047392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10000	Open in IMG/M
3300032160\|Ga0311301_10199198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3439	Open in IMG/M
3300032180\|Ga0307471_101950059	Not Available	736	Open in IMG/M
3300032783\|Ga0335079_11069834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	819	Open in IMG/M
3300032892\|Ga0335081_12357589	Not Available	555	Open in IMG/M
3300032955\|Ga0335076_11037149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	703	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.89%
Host-Associated	Host-Associated	2.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.85%
Aquatic	Environmental → Aquatic	7.04%
Plants	Host-Associated → Plants	2.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.14%
Freshwater	Environmental → Aquatic → Freshwater	4.23%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.11%
Sediment	Environmental → Aquatic → Sediment	0.70%
Peat	Environmental → Terrestrial → Peat	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.41%
Loam	Environmental → Terrestrial → Soil → Loam	34.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.52%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.11%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	32.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.82%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.11%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.41%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.17%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	24.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.82%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.11%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.11%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.41%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.70%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.70%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.70%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.70%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_08115040	2170459009	Grass Soil	MREEPEMSGRAREFLEHWVSDHVTAVSDEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
JGI12270J11330_100149049	3300000567	Peatlands Soil	MSERAREFLEHWLSGHVGAVADEYRMRETVRLVALCREDALRAGIPPDELRTAAGGNLIQSMMAALSAAAARSKETAASA*
JGI12635J15846_1002989110	3300001593	Forest Soil	MSERAREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQSMLTALSAAAGRTKVTADSD*
Ga0070714_1008749181	3300005435	Agricultural Soil	MSEAAREFLDRWMSEHVGTVPDEYRLRETVRLVALCREDAIRAGVELADLRAAAGGNLLESILAALSAATAPTRESVA*
Ga0070713_1004017593	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSEAAREFLDRWMSEHVGVVPDEYRLRETVRLVALCREDAIRAGVELADLRAAAGGNLLESILAALSAATAPTRESVA*
Ga0070731_100496766	3300005538	Surface Soil	MSERAREFLEHWLADHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAADGNLIQCMLAALSAVAARTRQTADLD*
Ga0070731_111666071	3300005538	Surface Soil	EAAREFLDRWMAEHVDAVPDEYRLRETVRLVALCREDAIRAGVGLADLRTAAGGNLLQTMLAALSAASARTRESVEFGLAGP*
Ga0070732_100003582	3300005542	Surface Soil	MSEAVREFLDRWVAEHVGAVPDEYRLRETVRLVALCREDAIHAGVDLADLRTAAGGNLLQTMLAALSAASARTKESVESD*
Ga0070732_104967292	3300005542	Surface Soil	MSEAAREFLDRWKSEHLGAVPDEYRLRETVRLVALCREDAIRAGVDLADLRAAAGGNLLESILAALSAATARTRESVA*
Ga0070761_100150089	3300005591	Soil	MSERTREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQYMLAALSAVAARTKQTADLD*
Ga0070762_100394581	3300005602	Soil	MSERAREFLEHWLSDHVTAVSDEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD*
Ga0070762_101257972	3300005602	Soil	MSERAREFLEHWVSGHVGMVADEYRMRETVRLVALCREDAIRAGIAPDALRTAADGNLIQYMLATLSTAAARTKQTADLD*
Ga0070762_104308932	3300005602	Soil	MSERAREFLEHWLSGHVGAVADEYRMRETVRLVALCRDDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD*
Ga0070763_100951763	3300005610	Soil	MSERAREFLEHWLSDHVTAVSDEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMFAVLSAAAARTRQTADLD*
Ga0070763_107043922	3300005610	Soil	MGERAREFLEHWVSSHVGVVADEYRMRETVRLVALCREDAIDAGIAPDELRTAAGGNLIQYMLAALSAAAARTKEAVHSD*
Ga0070764_100785552	3300005712	Soil	MREEPEVSERAREFLEHWVSGHVGAVSEEYRMRETVRLVALCREDANHAGIPPDELRTAAGGNLIQCMLAVLSSAAARTQETVDLD*
Ga0070766_1000950010	3300005921	Soil	MSERAREFLEHWLSRHVGVVADEYRMRETVRLVALCREDAIRAGIPPDELRAAAGGNLIQCMLAALSAAAARTKQTVDLD*
Ga0070766_101341552	3300005921	Soil	MSERARAFLEHWVSGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRMAAGGNLIQCMLAALSAAATRTKQTADLD*
Ga0070766_103446333	3300005921	Soil	MGERAREFLEHWVSSHVGVVADEYRMRETVRLVALCREDAIGAGIAPDELRTAAGGNLIQYMLAALSAAAARTKVAVHSD*
Ga0070766_104812992	3300005921	Soil	MSERAREFLEHWVSDHVGAVAGEYRMRETVRLVALCREDAIRAGVPPDELRAAAGGNLIQCMLAALSAAAARTKQTVDSD*
Ga0070766_113117652	3300005921	Soil	HVGAVAGEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQYMMAALSTAAARTKQTADLDS*
Ga0075017_1002107713	3300006059	Watersheds	MSERTREFLEHWLASHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQCMLAVLSAAAARTRQTADLD*
Ga0070712_1011370601	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSEAAREFLDRWMSEHVGAVPDEYRLRETVRLVALCREDAIRAGVDLADLRAAAGGNLLESILAALSAATA
Ga0070765_1001012854	3300006176	Soil	MSERAREFLEHWVSDHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIECMLATLSAAAARTKQTVDSD*
Ga0070765_1001441232	3300006176	Soil	MSERAREFLEHWVLDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQCMLAALSAAAARTRQTADSH*
Ga0070765_1002192564	3300006176	Soil	MSERAREFLEHWVSGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRMAAGGNLIQCMLAALSAAATRTKQTADLD*
Ga0070765_1003029952	3300006176	Soil	MSERAREFLEHWMSDHVAAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQFMLAVLSTAAARTKQTADLE*
Ga0070765_1003839344	3300006176	Soil	FLEHWVSGHVGAVSEEYRMRETVRLVALCREDANHAGIPPDELRTAAGGNLIQCMLAVLSAAAARTQETVDLD*
Ga0073928_102721483	3300006893	Iron-Sulfur Acid Spring	MSERAREFLEHWVSGHIGAVADEYRMRETVRLVALCREDAIRTGIPPDELRTAAGGNLIQCMLAALSAAAARTKEAVKMD*
Ga0073928_107740191	3300006893	Iron-Sulfur Acid Spring	MSERAREFLEHWLSGHVGAVADEYRMRETVRLVAQCRDDAIRAGIAPDELRAAAGGNLIQCMLAVLS
Ga0116221_10100708	3300009523	Peatlands Soil	MREEPEMSERAREFLEHWLSGHVGAVADEYRMRETVRLVALCREDALRAGIPPDELRTAAGGNLIQSMMAALSAAAARSKETAASA*
Ga0136449_1007430532	3300010379	Peatlands Soil	MREEPEMSERAREFLEHWLSGHVGAVAGEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQCMLAALSAAAARTKQTADLD*
Ga0136449_1022860403	3300010379	Peatlands Soil	SGHVGAVAGEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQCMLAALSAAAARTKQTVDLD*
Ga0126350_109446351	3300010880	Boreal Forest Soil	MREEPEMSERPRQFLEHWLSGHVGAVADEYRMRETVRLVALCREDAICAGIAPDELRAAAGGNLIQCMLAALSAVAARTRQTVDLD*
Ga0150983_148107232	3300011120	Forest Soil	EHWLSDHVTAVSDEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLA*
Ga0181523_104889821	3300014165	Bog	MSERAREFLEHWTSGHVGMVADEYRMRETVRLVALCREDAIRAGIPPDELRMAAGGNLIQCMLAALSAAAARTKQTADSD*
Ga0181535_106960072	3300014199	Bog	MSERAREFLEHWISDHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRMAAGGNLIQCMLAALSAAAARTKQTADSD*
Ga0181526_106471381	3300014200	Bog	MREEPEMSERAREFLEHWISGQVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRMAAGGNLIQCMLAALSAAATRTKQTADLD*
Ga0182018_101401173	3300014489	Palsa	MREEPEMSERTREFLEHWVSGHVGAVAGEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQCMLAALSAAAARTKQTVDLD*
Ga0182018_104227792	3300014489	Palsa	MREEPEMSERAREFLEHWISGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRMAAGGNLIQCMLAALSAAATRTKQTADLD*
Ga0181522_100668892	3300014657	Bog	MREEPEMSERTREFLEHWLASHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRMAAGGNLIQCMLAALSAAATRTKQTADSD*
Ga0187782_101967433	3300017975	Tropical Peatland	GGPKMSERAREFLERWLSDNVGVAPEEYRMRETVRLVALCRDDAVRAGVTPDELRTAAGGNLIQCMLATLSAAGVRTEAGAQS
Ga0187874_102038211	3300018019	Peatland	MSERAREFLEHWVSGHVGVVADEYRMRETVRLVALCREDAIGAGIPPDELRMAAGGNLIQCMLAALSAAAARSKGTAASA
Ga0193751_10143009	3300019888	Soil	MRKPIEAGKIWGECIREEPEMSERAREFLEHWVSDHVTAVSDEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLEVLSAAAARTRQTADLD
Ga0193726_100024238	3300020021	Soil	MSERAREFLEHWVSGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQCTLAALSAAAARTKQTVDSD
Ga0210399_107785141	3300020581	Soil	MSERAREFLEHWVLDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQCMLAALSAAAARTRQTADSH
Ga0210399_116036811	3300020581	Soil	MRKAIEAGKIWGEYIREEPEMSERAREFLEHWVSEHVSAVAEEYRMRETVRLVAQCREDAIRASVAPDELRAAAGGNLIQCMLAVLSAAAARPRQTADLD
Ga0210395_1000052210	3300020582	Soil	MSERAREFLEHWVSGHVGVVADEYRMRETVRLVALCREDAIGAGIPPDELRMAAGGNLIQCMLAALSAAAARTKQTADLD
Ga0210395_104886522	3300020582	Soil	MSERAREFLEHWVSDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQCMLATLSAAAARTKQTVDSD
Ga0210395_111569872	3300020582	Soil	MSERAREFLEHWVSGHVGAVAGEYRMRETVRLVALCREDAIRAGVPPDELRAAAGGNLIQCMLAALSAAAARTKQTVDSD
Ga0210401_102079913	3300020583	Soil	MRKAIEAGKIWDECIREEPEMSERAREFLEHWLSGHVGAVADEYRMRETVRLVALCRDDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0210401_104870432	3300020583	Soil	MSERAREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRDGIPPDELRAAAGGNLIQCMLAVLSAAAARTKQTADSD
Ga0210401_109158252	3300020583	Soil	MSERAREFLEHWVSDHVAAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQCMLAALSAAAARTRQTADSH
Ga0210404_100881361	3300021088	Soil	MSERAREFLEHWVSDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQCMLATLS
Ga0210400_114047902	3300021170	Soil	PEMSGRAREFLEHWVSDHVMAVSDEYRMRETVRLVALCRDDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0210405_1000118128	3300021171	Soil	MSERAREFLEHWLSDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAALSAAAARTKQTVDLD
Ga0210405_101723461	3300021171	Soil	MSERAREFLEHWLADHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAADGNLIQCMLAALSAVAARTRQTADLD
Ga0210405_105073111	3300021171	Soil	MSERTREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQYMLAALSAAAARTKQTADLD
Ga0210408_102392924	3300021178	Soil	MRKAIEAGKIWGECIREEPEMSGRAREFLEHWVSDHVMAVSDEYRMRETVRLVALCRDDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0210408_108531631	3300021178	Soil	MSERAREFLEHWLSRHVGVVADEYRMRETVRLVALCREDAIRAGIPPDELRAAAGGNLIQCMLAALSAAAARTKQTVDLD
Ga0210388_108640393	3300021181	Soil	WVSDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQCMLAALSAAAARTRQTADSH
Ga0210388_113935201	3300021181	Soil	GDECMREVPEMSERAREFLEHWVSGHVGMVADEYRMRETVRLVALCREDAIRAGIAPDALRTAADGNLIQYMLAALSTAAARTKQTADLD
Ga0210388_116231071	3300021181	Soil	VNERAREFLEHWVSAHVGAVSEEYRMRETVRLVALCREDANHAGIPPDELRTAAGGNLIQCMLAALSAAATRTQETVDLD
Ga0210393_101771911	3300021401	Soil	MSERAREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQSMLTALSAAAGRTKVTADSD
Ga0210393_102116972	3300021401	Soil	MSEQAREFLEHWVSDHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIECMLATLSAAAARTKQTVDSD
Ga0210385_115010531	3300021402	Soil	MSERAREFLEHWVSDHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIECMLATLSAAAARTKQTVDSD
Ga0210389_101523211	3300021404	Soil	EQAREFLEHWVSGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIECMLATLSAAAARTKQTVDSD
Ga0210389_103799432	3300021404	Soil	MSERAREFLEHWVSDHVTAVSDEYRMRETVRLVALCREDAIPAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0210389_106344651	3300021404	Soil	MSERAREFLEHWVSGHVGMVADEYRMRETVRLVALCREDAIRAGIAPDALRTAADGNLIQYMLATLSTAAARTKQTADLD
Ga0210386_104546111	3300021406	Soil	MSERAREFLEHWVSDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQCMLAALSAAAARTRQTADSH
Ga0210383_101683133	3300021407	Soil	MREEPEVSERAREFLEHWVSGHVGAVSEEYRMRETVRLVALCREDANHAGIPPDELRTAAGGNLIQCMLAVLSSAAARTQETVDLD
Ga0210394_103433751	3300021420	Soil	MSERAREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRAGITPDELRAAAGGNLIQSMLTALSAAAGRTKVTADSD
Ga0210384_102772432	3300021432	Soil	MSERAREFLEHWLSDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQYMLAALSAAAARIKQTADLD
Ga0210390_103483722	3300021474	Soil	MREVPEMSERAREFLEHWVSDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQCMLATLSAAAARTKQTVDSD
Ga0210390_103613062	3300021474	Soil	MSERAREFLEHWVSDHVGAVADEYRMRETVRLVALCREDAIHAGIAPDELRTAAGGNLIQCMLAALSAAAARTRQTADSH
Ga0210390_111931671	3300021474	Soil	ERAREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRAGITPDELRAAAGGNLIQSMLTALSAAAGRTKVTADSD
Ga0210392_102010922	3300021475	Soil	MSERAREFLEHWVSGHVGVVADEYRMRETVRLVALCREDAIRAGIAPDALRTAADGNLIQYMLAALSTAAARTKQTADLD
Ga0210392_106516741	3300021475	Soil	MSERAREFLEHWVSDHVGAVADEYRMRETVRLVALCRDDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0210398_101124574	3300021477	Soil	MSERAREFLEHWVSEHVAAVAEEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAAQTRQTADLD
Ga0210398_107340511	3300021477	Soil	MSERTREFLEHWLSGHVGAVADEYRMRETVRLVALCRDDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0213851_17216882	3300021860	Watersheds	MSERTREFLEHWLASHVGAVADEYRMRETVRLVALCRDDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0242659_10342992	3300022522	Soil	MSERAREFLEHWLSDHAGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQYMLAALSAAAARTKQTADLD
Ga0212123_105266552	3300022557	Iron-Sulfur Acid Spring	MSERAREFLEHWVSGHIGAVADEYRMRETVRLVALCREDAIRTGIPPDELRTAAGGNLIQCMLAALSAAAARTKEAVKMD
Ga0224551_10583111	3300023259	Soil	MSERAREFLEHWLSGHVGAVADEYRMRETVRLVAQCRDDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTKQTADLD
Ga0208731_10183242	3300027029	Forest Soil	MREVPEMSERAREFLEHWVLDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQCMLAALSAAAARTRQTADSH
Ga0208604_10004139	3300027090	Forest Soil	MSERAREFLEHWLSDHVGAVADEYRMRETVRLVALCREDAIRAGIVPDELRAAAGGNLIQCMLAALSAAAARTKQTVDLD
Ga0208099_10541811	3300027096	Forest Soil	RTREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQYMLAALSAVAARTKQTADLD
Ga0209010_10011464	3300027370	Forest Soil	MSERAREFLEHWISGHIGAVADEYRMRETVRLVALCREDAIRAGIPPDELRMAAGGNLIQCMLAALSAAATRTKQTADLD
Ga0209115_10044854	3300027567	Forest Soil	MSERAREFLEHWMSDHVAAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQFMLAVLSTAAARTKQTADLE
Ga0208042_11704452	3300027568	Peatlands Soil	MSERAREFLEHWLSGHVGAVADEYRMRETVRLVALCREDALRAGIPPDELRTAAGGNLIQSMMAALSAAAARSKETAASA
Ga0208043_11333001	3300027570	Peatlands Soil	MRKAIEAGKIWGECMREEPEMSERAREFLEHWLADHIAAVADEYRMRETVRLVAQCREDAIRAGIAPDELRAAAGGNLIQCMLAALSAAAARTRQTADLD
Ga0209625_10333152	3300027635	Forest Soil	MSERAREFLEHWVSGHVGAVADEYRMRETVRLVAQCRDDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0209011_10394602	3300027678	Forest Soil	MSERAREFLEHWLSGHVGAVAGEYRMRETVRLVAQCREDAIRAGIPPDELRAAAGGNLIQCTLAALSAAASRTKQTVDLD
Ga0209580_100000011012	3300027842	Surface Soil	MSEAVREFLDRWVAEHVGAVPDEYRLRETVRLVALCREDAIHAGVDLADLRTAAGGNLLQTMLAALSAASARTKESVESD
Ga0209580_106484721	3300027842	Surface Soil	YREPEMSEAAREFLDRWKSEHLGAVPDEYRLRETVRLVALCREDAIRAGVDLADLRAAAGGNLLESILAALSAATARTRESVA
Ga0209274_100826852	3300027853	Soil	MSERTREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQYMLAALSAVAARTKQTADLD
Ga0209693_100126505	3300027855	Soil	MSERAREFLEHWVSGHVGVVADEYRMRETVRLVALCREDAIGAGIPPDELRMAAGGNLIQCMLAALSAAAAR
Ga0209693_100191797	3300027855	Soil	EHWVSSHVGVVADEYRMRETVRLVALCREDAIDAGIAPDELRTAAGGNLIQYMLAALSAAAARTKEAVHSD
Ga0209693_100946652	3300027855	Soil	MSERAREFLEHWLSDHVTAVSDEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0209693_103899243	3300027855	Soil	ERAREFLEHWVSGHVGMVADEYRMRETVRLVALCREDAIRAGIAPDALRTAADGNLIQYMLATLSTAAARTKQTADLD
Ga0209579_100341232	3300027869	Surface Soil	MSERAREFLEHWLADHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAHGNLIQCMLAALSAVAARTRQTADLD
Ga0209275_108621152	3300027884	Soil	SERAREFLEHWLSDHVTAVSDEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0209380_100336511	3300027889	Soil	AREFLEHWVSSHVGVVADEYRMRETVRLVALCREDAIGAGIAPDELRTAAGGNLIQYMLATLSAAAARTKEAVHSD
Ga0209380_101355912	3300027889	Soil	MSERARAFLEHWVSGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRMAAGGNLIQCMLAALSAAATRTKQTADLD
Ga0209380_101375642	3300027889	Soil	MSERAREFLEHWVSDHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQYMLAALSAAAARTKQTADLD
Ga0209380_101588562	3300027889	Soil	MSERAREFLEHWVSDHVGAVAGEYRMRETVRLVALCREDAIRAGVPPDELRAAAGGNLIQCMLAALSAAAARTKQTVDSD
Ga0209624_102043871	3300027895	Forest Soil	REFLEHWVSGHVGVVADEYRMRETVRLVALCREDAIRAGIAPDELRTAADGNLIQYMLAALSTAAARTKQTADLD
Ga0209526_100835222	3300028047	Forest Soil	MRKAIEAGKFWGECIREEPEMSERAREFLEHWLSDHVGAVADEYRMRETVRLVAQCRDDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0308309_100555243	3300028906	Soil	MSERAREFLEHWVSDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQCMLAALSAAAARTKQTVDSD
Ga0308309_100755251	3300028906	Soil	MSERAREFLEHWVSGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRMAAGGNLIQCMLAALSAAATRTKQTADLD
Ga0308309_103570053	3300028906	Soil	MSERAREFLQHWVSGHVGAVADEYRMRETVRLVAQCREDAVGAGIAPDELRTAAGGNLIQYMLAALSAAASRNKQTADLD
Ga0308309_105251731	3300028906	Soil	TQNTWNECIECMREVPEMSERAREFLEHWVLDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQCMLAALSAAAARTRQTADSH
Ga0308309_108206582	3300028906	Soil	VSERAREFLEHWVSGHVGAVSEEYRMRETVRLVALCREDANHAGIPPDELRTAAGGNLIQCMLAALSAAATRTQETVDLD
Ga0308309_108683411	3300028906	Soil	MSERAREFLEHWMSDHVAAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQYMLAVLSKAAARTKQTADLA
Ga0308309_111583332	3300028906	Soil	EEPEMSERAREFLEHWLSDHVGAVADEYRMRETVRLVALCRDDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAAPTRQTADLD
Ga0308309_111687562	3300028906	Soil	MSERTREFLEHWLSGHVGAVADEYRMRETVRLVAQCRDDAIRAGIPPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0222749_107099772	3300029636	Soil	MSERAREFLEHWLSDHAGAVSDEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLALLSAAAARTRQTADLD
Ga0265763_10020515	3300030763	Soil	MSERAREFLEHWVSEHVSAVAEEYRMRETVRLVAQCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0075405_121183552	3300030847	Soil	MSERAREFLEHWLSDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0265753_11206372	3300030862	Soil	MSERAREFLEHWVSGHVGMVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIECMLATLSAAAARTKQTVDSD
Ga0265753_11458191	3300030862	Soil	MSERAREFLEHWLSDHVTAVSDEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQYMLAVLSAAAARTRQTADLD
Ga0265770_10884031	3300030878	Soil	MSERAREFLEHWVSDHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQCMLATLSAAAARTKQTADLD
Ga0075373_115846481	3300030945	Soil	MSGRAREFLEHWVSDHVTAVSDEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAVRPRQTADLD
Ga0265773_10054791	3300031018	Soil	REEPEMSERAREFLEHWLSVHVGAVADEYRMRETVRLVAQCRDDAIRAGIAPDELRAAAGGNLIQCMMAVLSAAAARTRQTADLD
Ga0265760_101835861	3300031090	Soil	MSERAREFLEHWMSAHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAATRTKQTADLD
Ga0265332_100978221	3300031238	Rhizosphere	MSGRAREFLEHWLSDHVTAVSDEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAAQTRQTADLD
Ga0265316_111341222	3300031344	Rhizosphere	MSGRAREFLEHWLSDHVTAVSDEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAERTRQTADLD
Ga0170820_118529501	3300031446	Forest Soil	MSERAREFLEHWVSGHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLATLSAAAARTKQAADSD
Ga0170820_125299332	3300031446	Forest Soil	MSGRAREFLEHWVSDHVTAVSDEYRMRETVRLVALCREDAIRAGIVPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0170818_1122616003	3300031474	Forest Soil	MSGRAREFLEHWVSDHVTAVSDEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0265313_103301821	3300031595	Rhizosphere	EMSGRAREFLEHWLSDHVTAVSDEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAERTRQTADLD
Ga0307476_1000044627	3300031715	Hardwood Forest Soil	MSERAREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRAGIVPDELRAAAGGNLIQSMLTALSAAAGRTKVTADSD
Ga0307474_104998953	3300031718	Hardwood Forest Soil	MSERTREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIGAGIPPDELRTAAGGNLIQYMLAALSAVAARTKQTADLD
Ga0307477_110476132	3300031753	Hardwood Forest Soil	GHVGAVADEYRMRETVRLVALCREDAIRAGIVPDELRAAAGGNLIQSMLTALSAAAGRTKVTADSD
Ga0307478_107283613	3300031823	Hardwood Forest Soil	RAREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRAGIAPDELRTAAGGNLIQCMLAALSAAAARTRQTADLD
Ga0318527_101421463	3300031859	Soil	MSERAREFLDHWLADHVASVDDTRRLRETVRLVTLCREDAVRAGLAPEELRKASGGDLIGTVLVALSAAAAPATVPALAGEG
Ga0311301_100473928	3300032160	Peatlands Soil	MSERTREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQFMLAALSAAAARTKETAGSD
Ga0311301_101991982	3300032160	Peatlands Soil	MRKAIEAGKIWGECMREEPEMSERALEFLEHWLADHIAAVADEYRMRETVRLVAQCREDAIRAGIAPDELRAAAGGNLIQCMLAALSAAAARTRQTADLD
Ga0307471_1019500592	3300032180	Hardwood Forest Soil	MRKAIEAGKIWGECMREEPEMSERAREFLEHWLSDHVAAVADEYRMRETVRLVALCREDAIRAGIAPDELRAAAGGNLIQCMLAVLSAAAARTRQTADLD
Ga0335079_110698341	3300032783	Soil	RAREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQSMMAALSAAAAPSKETAASA
Ga0335081_123575891	3300032892	Soil	MSERAREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDELRTAAGGNLIQSMMAALSAAAAPSKETAASA
Ga0335076_110371491	3300032955	Soil	RAREFLEHWLSGHVGAVADEYRMRETVRLVALCREDAIRAGIPPDDLRTAAGGNLIQSMMAALSAAAAPSKETAASA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052745

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences