Metagenome / Metatranscriptome Family F052578

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052578
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	69 residues
Representative Sequence	LDPDLRNALLLLGLIFCGFFAAVTIYVIVDTGLTLRTYGDIGAIGLYAVSLLIVVMIAAGLIGALRNPPDD
Number of Associated Samples	107
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.13 %
% of genes near scaffold ends (potentially truncated)	20.42 %
% of genes from short scaffolds (< 2000 bps)	78.87 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.239 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (14.789 % of family members)
Environment Ontology (ENVO)	Unclassified (24.648 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.085 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.59% β-sheet: 0.00% Coil/Unstructured: 41.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF01694	Rhomboid	46.48
PF00768	Peptidase_S11	21.83
PF01471	PG_binding_1	3.52
PF02812	ELFV_dehydrog_N	1.41
PF14340	DUF4395	1.41
PF06197	DUF998	0.70
PF11303	DUF3105	0.70
PF00582	Usp	0.70
PF07690	MFS_1	0.70
PF10431	ClpB_D2-small	0.70
PF02628	COX15-CtaA	0.70
PF07485	DUF1529	0.70
PF12695	Abhydrolase_5	0.70
PF00990	GGDEF	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	46.48
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	21.83
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	1.41
COG1612	Heme A synthase	Coenzyme transport and metabolism [H]	0.70
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.24 %
Unclassified	root	N/A	26.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.24 %
Unclassified	root	N/A	26.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.24 %
Unclassified	root	N/A	26.76 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	66.20 %
Unclassified	root	N/A	26.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	66.20 %
Unclassified	root	N/A	26.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.76 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	15.49 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.76 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	8.45 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.76 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	3.52 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.76 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	3.52 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.76 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3.52 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908036\|A5_v_NODE_24118_len_5937_cov_8_010443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5987	Open in IMG/M
2170459005\|F1BAP7Q01ASKFR	Not Available	526	Open in IMG/M
2170459015\|G14TP7Y01EV4RN	Not Available	726	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0318645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101407747	Not Available	782	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101888363	Not Available	609	Open in IMG/M
3300000550\|F24TB_10549229	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300000550\|F24TB_15137023	Not Available	587	Open in IMG/M
3300000956\|JGI10216J12902_100370238	Not Available	545	Open in IMG/M
3300000956\|JGI10216J12902_119111753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1173	Open in IMG/M
3300001686\|C688J18823_10034697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3462	Open in IMG/M
3300001686\|C688J18823_10338270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	982	Open in IMG/M
3300002568\|C688J35102_119543284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	716	Open in IMG/M
3300002568\|C688J35102_120321875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	989	Open in IMG/M
3300002568\|C688J35102_120539409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1159	Open in IMG/M
3300003373\|JGI25407J50210_10129844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300003659\|JGI25404J52841_10110737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	577	Open in IMG/M
3300003990\|Ga0055455_10006736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2395	Open in IMG/M
3300003990\|Ga0055455_10184849	Not Available	648	Open in IMG/M
3300004081\|Ga0063454_100048471	Not Available	1670	Open in IMG/M
3300004081\|Ga0063454_101316940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300004081\|Ga0063454_101935379	Not Available	520	Open in IMG/M
3300004114\|Ga0062593_100020049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3502	Open in IMG/M
3300004156\|Ga0062589_100071080	Not Available	2070	Open in IMG/M
3300004156\|Ga0062589_102249742	Not Available	559	Open in IMG/M
3300004463\|Ga0063356_102642678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	771	Open in IMG/M
3300004479\|Ga0062595_100131717	Not Available	1411	Open in IMG/M
3300004479\|Ga0062595_101717591	Not Available	592	Open in IMG/M
3300004643\|Ga0062591_100301150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1262	Open in IMG/M
3300005093\|Ga0062594_101937945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300005093\|Ga0062594_103313061	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005105\|Ga0066812_1011675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	633	Open in IMG/M
3300005332\|Ga0066388_100122356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3128	Open in IMG/M
3300005332\|Ga0066388_100173894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2756	Open in IMG/M
3300005332\|Ga0066388_101193907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1300	Open in IMG/M
3300005332\|Ga0066388_101634183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1136	Open in IMG/M
3300005440\|Ga0070705_101175714	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005441\|Ga0070700_101415549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300005529\|Ga0070741_10009030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	19618	Open in IMG/M
3300005544\|Ga0070686_101158217	Not Available	641	Open in IMG/M
3300005545\|Ga0070695_101573145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300005546\|Ga0070696_100278155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1275	Open in IMG/M
3300005547\|Ga0070693_100839280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	684	Open in IMG/M
3300005549\|Ga0070704_100039381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3245	Open in IMG/M
3300005562\|Ga0058697_10157818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	996	Open in IMG/M
3300005713\|Ga0066905_100080073	All Organisms → cellular organisms → Bacteria	2143	Open in IMG/M
3300005713\|Ga0066905_100210453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1462	Open in IMG/M
3300005719\|Ga0068861_102334849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300005764\|Ga0066903_100031388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6018	Open in IMG/M
3300005937\|Ga0081455_10012164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	8597	Open in IMG/M
3300005937\|Ga0081455_10044197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3889	Open in IMG/M
3300005937\|Ga0081455_10110028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2191	Open in IMG/M
3300005937\|Ga0081455_11058588	Not Available	501	Open in IMG/M
3300005981\|Ga0081538_10062694	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300005981\|Ga0081538_10112264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1334	Open in IMG/M
3300005983\|Ga0081540_1000806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	28823	Open in IMG/M
3300006046\|Ga0066652_101228866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300006048\|Ga0075363_100047305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2284	Open in IMG/M
3300006051\|Ga0075364_10654906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300006573\|Ga0074055_11407785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	996	Open in IMG/M
3300006573\|Ga0074055_11610657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300006575\|Ga0074053_11695081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300006576\|Ga0074047_10024948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4985	Open in IMG/M
3300006605\|Ga0074057_11647258	Not Available	517	Open in IMG/M
3300006755\|Ga0079222_12130316	Not Available	555	Open in IMG/M
3300006796\|Ga0066665_10553246	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300006806\|Ga0079220_10082087	All Organisms → cellular organisms → Bacteria → Proteobacteria	1621	Open in IMG/M
3300009545\|Ga0105237_11522773	Not Available	676	Open in IMG/M
3300009789\|Ga0126307_10000046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	65653	Open in IMG/M
3300009789\|Ga0126307_10000551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24120	Open in IMG/M
3300009789\|Ga0126307_10010014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6856	Open in IMG/M
3300009789\|Ga0126307_10116328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2126	Open in IMG/M
3300009789\|Ga0126307_11681067	Not Available	516	Open in IMG/M
3300009840\|Ga0126313_10009094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6179	Open in IMG/M
3300009840\|Ga0126313_10258467	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300009840\|Ga0126313_10353068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1159	Open in IMG/M
3300009840\|Ga0126313_11190739	Not Available	628	Open in IMG/M
3300010036\|Ga0126305_10793939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	643	Open in IMG/M
3300010037\|Ga0126304_10205044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1290	Open in IMG/M
3300010037\|Ga0126304_10703713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300010037\|Ga0126304_10846551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300010038\|Ga0126315_10313068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	971	Open in IMG/M
3300010039\|Ga0126309_10000526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	12869	Open in IMG/M
3300010039\|Ga0126309_10659729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300010041\|Ga0126312_10017394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4799	Open in IMG/M
3300010044\|Ga0126310_10148212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1491	Open in IMG/M
3300010045\|Ga0126311_11529333	Not Available	560	Open in IMG/M
3300010166\|Ga0126306_10008462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6399	Open in IMG/M
3300010166\|Ga0126306_10934876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300010362\|Ga0126377_10619766	Not Available	1128	Open in IMG/M
3300010375\|Ga0105239_11682935	Not Available	734	Open in IMG/M
3300012198\|Ga0137364_11100190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300012204\|Ga0137374_10880931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300012208\|Ga0137376_10491071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1065	Open in IMG/M
3300012285\|Ga0137370_10352493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	886	Open in IMG/M
3300012353\|Ga0137367_10990353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300012355\|Ga0137369_10532804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300012355\|Ga0137369_10643143	Not Available	734	Open in IMG/M
3300012356\|Ga0137371_10819856	Not Available	709	Open in IMG/M
3300012358\|Ga0137368_10084151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2525	Open in IMG/M
3300012360\|Ga0137375_10483502	Not Available	1058	Open in IMG/M
3300012907\|Ga0157283_10411464	Not Available	506	Open in IMG/M
3300012908\|Ga0157286_10057502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1020	Open in IMG/M
3300012951\|Ga0164300_10247405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	903	Open in IMG/M
3300012971\|Ga0126369_11514307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	760	Open in IMG/M
3300012977\|Ga0134087_10350276	Not Available	706	Open in IMG/M
3300012986\|Ga0164304_10465879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	915	Open in IMG/M
3300015371\|Ga0132258_10708047	All Organisms → cellular organisms → Bacteria	2535	Open in IMG/M
3300017965\|Ga0190266_10180180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	987	Open in IMG/M
3300018431\|Ga0066655_11104771	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300018433\|Ga0066667_10480365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1020	Open in IMG/M
3300018465\|Ga0190269_11837272	Not Available	519	Open in IMG/M
3300019361\|Ga0173482_10242457	Not Available	763	Open in IMG/M
3300020140\|Ga0179590_1163848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300020170\|Ga0179594_10223668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	708	Open in IMG/M
3300022756\|Ga0222622_10495640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	872	Open in IMG/M
3300024181\|Ga0247693_1034293	Not Available	707	Open in IMG/M
3300024288\|Ga0179589_10318035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	703	Open in IMG/M
3300025552\|Ga0210142_1002968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3185	Open in IMG/M
3300025927\|Ga0207687_10916958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	750	Open in IMG/M
3300028707\|Ga0307291_1153733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300028714\|Ga0307309_10164185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300028720\|Ga0307317_10122253	Not Available	869	Open in IMG/M
3300028720\|Ga0307317_10340169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300028755\|Ga0307316_10066081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1231	Open in IMG/M
3300028771\|Ga0307320_10263399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	681	Open in IMG/M
3300028782\|Ga0307306_10107811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300028784\|Ga0307282_10291910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	786	Open in IMG/M
3300028793\|Ga0307299_10141776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	903	Open in IMG/M
3300028814\|Ga0307302_10215303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300028828\|Ga0307312_10585796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	738	Open in IMG/M
3300028875\|Ga0307289_10206497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300028876\|Ga0307286_10270135	Not Available	625	Open in IMG/M
3300030619\|Ga0268386_10983693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300031228\|Ga0299914_10765631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300031740\|Ga0307468_100080078	Not Available	1857	Open in IMG/M
3300031938\|Ga0308175_100296451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1647	Open in IMG/M
3300032159\|Ga0268251_10284272	Not Available	681	Open in IMG/M
3300032159\|Ga0268251_10583763	Not Available	512	Open in IMG/M
3300032205\|Ga0307472_100029518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3156	Open in IMG/M
3300033433\|Ga0326726_12286149	Not Available	525	Open in IMG/M
3300033551\|Ga0247830_10920108	Not Available	697	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.21%
Host-Associated	Host-Associated	14.08%
Engineered	Engineered	0.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.39%
Plants	Host-Associated → Plants	14.08%
Aquatic	Environmental → Aquatic	2.82%
Solid Waste	Engineered → Solid Waste	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.34%
Roots	Host-Associated → Plants → Roots	3.52%
Marine	Environmental → Aquatic → Marine	2.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.11%
Phylloplane	Host-Associated → Plants → Phylloplane	2.11%
Sediment	Environmental → Aquatic → Sediment	0.70%
Peat	Environmental → Terrestrial → Peat	0.70%
Grass	Engineered → Solid Waste → Grass	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.79%
Loam	Environmental → Terrestrial → Soil → Loam	16.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.63%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.11%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.11%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.11%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%
Composting	Engineered → Solid Waste → Grass → Composting	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.04%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	7.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.93%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.11%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	2.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.11%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.11%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.41%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.70%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	14.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.15%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	7.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.23%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	4.23%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.11%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	2.11%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.41%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.41%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.70%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.70%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908036	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025552	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A5_v_00013670	2124908036	Soil	LDPDLRNALLLLGLIFCGFFAVVTIYSIVDTGLRLRTYGDIGAIGLYALSLLIVVMIAAGLIGALRNPPDD
E41_02080120	2170459005	Grass Soil	MDPDLRNALLLLGLVFCGFFAAVTIYVIVDTGLRLRTYGDIGAIGLYAVSLLIIAMIAAGLIGALRNPPDD
4PV_01108780	2170459015	Switchgrass, Maize And Mischanthus Litter	LDPDLRNALLVLGLLFCGFFAVVTIYVIADTGLHLRTYGDIGAIILYGISLLIIGMIAAGLIGALRNPPDD
ICChiseqgaiiDRAFT_03186452	3300000033	Soil	LDPDLRNALLLIGLLFCGFFAAVTLYVIADTGLHLRTYGDLGAIILYGISLLIVGMIAAGLIGSLRNPPDE*
INPhiseqgaiiFebDRAFT_1014077472	3300000364	Soil	LDPDLRNALLLLGLIFCGFFAAVTVFVIVDTGLRLRTYGDIGAIALYGVSLGIVGMIAAGLIGALRNPPDD*
INPhiseqgaiiFebDRAFT_1018883631	3300000364	Soil	LIFCGFFAVVTLYVIADTGLSLRTYGDIGALGLYAVSLLIIVMIAAGLIGALRNPPDD*
F24TB_105492292	3300000550	Soil	VDPDLRNALLILGLIFCGFFAVVTIYVIVDSGLRLRTYGDIGAIALYGISLLIVVMIAAGLIGALRNPPDD*
F24TB_151370232	3300000550	Soil	LDPDLRNALLLIGLVFCGFFAAVTIYVILDTGLRLRTYGDIGAIILYGISLLIIAMIAAGLIGALRNPPDD*
JGI10216J12902_1003702382	3300000956	Soil	LDPDLRNALLLIGLVFCGFFAAVTIYVIVDTGLRLRTYGDIGAIGLYAVSLLIIGMIAAGLIGALRNPPDD*
JGI10216J12902_1191117532	3300000956	Soil	LDPDLRNALLLIGLIFCGFFAAVTVYVIVDTGLRLRTYGDIGAIILYGISLLIIAMIAAGLIGALRNPPDD*
C688J18823_100346972	3300001686	Soil	MDPDLRNALLMIGLIFCGFFAAITLYVIADTGLHLRTYGDIGAIGLYGVSLLIIVMIAAGLIGALRNPPDD*
C688J18823_103382702	3300001686	Soil	MDPDLRTALLLIGLVFCGFFAAVTIYVIADTGLHLRTYGDIGAVGLYGVSLLIVVMIGVGLIGALRNPPDD*
C688J35102_1195432842	3300002568	Soil	MDPDLRTALLLLGLIFCGFFAVVTLYVIVDTGLSLRTYGDIGALGLYGVSLLIIGMIAAGLIGALRNPPDD*
C688J35102_1203218752	3300002568	Soil	LDPDLRNALLLIGLVFCGFFAAVTIYVIVDTGLHLRTYGDIGAIGLYGISLLIVVMIAAGLIGALRNPPDG*
C688J35102_1205394092	3300002568	Soil	MDPDLRNALLLIGLIFCGFFATVTIYVMVDTGLRLRTYGDIGAIILYGISLLIVVLIASGLIGALRNPPDD*
JGI25407J50210_101298442	3300003373	Tabebuia Heterophylla Rhizosphere	LDPDLRNALLLLGLIFCGGFAVVTIYVIVDTGLSLRTYGDIGAIILYGISLLVVLLIASGLIGALRNPPDD*
JGI25404J52841_101107372	3300003659	Tabebuia Heterophylla Rhizosphere	LDPDLRNALLLLGLLFCGFFAVITLYVIVDTGLRLRTYGDIGAIILYGVSLLIIGLIAAGLIGALRNPPDD*
Ga0055455_100067363	3300003990	Natural And Restored Wetlands	VDPDLRNALLLLGLIFCGFFAAVTIYVIVDTGLRLRTYGDIGAIGLYVVSLAIVLMIAAGLIGALRNPPDE*
Ga0055455_101848491	3300003990	Natural And Restored Wetlands	LDPDLRNVLLLLGLIFCGFFAAVTIYVIVDTGLRLRTYGDIGAIGLYAVSLLIVGMIAAGLIGALRNPPDD*
Ga0063454_1000484713	3300004081	Soil	MDPDLRTALLLIGLVFCGFFAAVTIYVIADTGLHLRTYGDIGAVGLYGVSLLIVAMIGVGLIGALRNPPDD*
Ga0063454_1013169402	3300004081	Soil	LDPDLRNALLLLGLIFCGFFAVITLYVIVDTGLRLRTYGDIGAIILYGISLLVVVLIASGLIGALRNPPDD*
Ga0063454_1019353792	3300004081	Soil	MDPDLRNALLLIGLIFCAFFAAVTLYVIADTGLHLKTYGDIGAIGLYAVSLLIVVMIAAGLIGALRNPPDD*
Ga0062593_1000200495	3300004114	Soil	LDPDLRNALLIVGLIFCGFFAAVTLYVIVDSGLRLRTYGDIGAIALYGVSLLIVVMIAAGLIGALRNPPDD*
Ga0062589_1000710802	3300004156	Soil	LDPDLRTALLLLGLIFCGFFAAVTLYVIADTGLHVRTYGDIGAIALYVVSLLIVVMIGAGLIGALRNPPDD*
Ga0062589_1022497422	3300004156	Soil	LDPDLRNALLLLGLIFCGFFAVITVYVIVDTGLRLRTYGDIGAIVLYGVSLLIIGLIAAGLIGALRNPPDD*
Ga0063356_1026426782	3300004463	Arabidopsis Thaliana Rhizosphere	LIIGLLFCGFFAAVTLYVIVDSGLRLRTYGDIGAMVLYGVSLLIVVLIATGLIGALRNPPDD*
Ga0062595_1001317171	3300004479	Soil	LDPDLRNALLIIGLLFCGFFAAVTLYVIVDSGLRLRTYGDIGAMVLYGVSLLIVVLIATGLIGALRNPPDD*
Ga0062595_1017175911	3300004479	Soil	VDPDLRTALLLLGLIFCGFFAVVTLYVIADTGLSLRTYGDIGALGLYAVSLLIIVMIAAGLIGALRNPPDD*
Ga0062591_1003011502	3300004643	Soil	LDPGLRTALLLVGLIFCGFFAVVTIYVIVDTGLRLRTYGDIGAIGLYGVSLLIVVMIAAGLIGALRNPPDD*
Ga0062594_1019379452	3300005093	Soil	VDPDLRTALLLLGLIFCGFFAAVTLYVIADTGLSLRTYGDIGALGLYAISLLIIVMIAAGLIGALRNPPDD*
Ga0062594_1033130612	3300005093	Soil	LDPDLRNALLLLGLVFCGFFAAITIYVIVDTGLRLHTYGDIGAIGLYGVSLLIIVMIAAGLIGALRNPPDD*
Ga0066812_10116751	3300005105	Soil	LEPDLRTALLLLGLIFCGFFAAVTLYVIADTGLHVRTYGDIGAIALYVVSLLIVVMIGAGLIGALRNPPDD*
Ga0066388_1001223563	3300005332	Tropical Forest Soil	MDPDLRTALLVLGLVFCGFFAALTIGAIVDTGLRLRTYGDIGAVGLYGVSLLIVGLIATGLIGALRNPPDD*
Ga0066388_1001738944	3300005332	Tropical Forest Soil	LDPDLRNALLLLGLLFCGFFAAVTIYVIVDSGLRLRTYGDLGAIILYGISLLIIGLIAAGLIGALRNPPDD*
Ga0066388_1011939072	3300005332	Tropical Forest Soil	LDPDLRNALLLLGLIFCGFFAVVTVYVIVDTGLRLRTYGDIGAIILYGVSLLVIGMIAAGLIGALRNPPDD*
Ga0066388_1016341832	3300005332	Tropical Forest Soil	LDPDLRNALLLLGLIFCGFFAVITVYVIVDTGLRLRTYGDIGAIILYGVSLLIIGLIAAGLIGALRNPPDD*
Ga0070705_1011757142	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LLGLIFCGFFAVVTIYVIVDTGLRLRTYGDIGAVGLYGVSLLIVVMIAAGLIGALRNPPDD*
Ga0070700_1014155492	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VDPDLRTALLLLGLIFCGFFAVVTLYVIADTGLSLRTYGDIGALGLYAISLLIIVMIAAGLIGALRNPPD
Ga0070741_100090302	3300005529	Surface Soil	MLGLIFCGFFAAVTIYVIADTGLRLRTYGDIGALILYGISLLIIVMIAAGLIGAIRNPPDE*
Ga0070686_1011582171	3300005544	Switchgrass Rhizosphere	RTALLLLGLIFCGFFAVVTLYVIADTGLSLRTYGDIGALGLYAISLLIIVMIAAGLIGALRNPPDD*
Ga0070695_1015731451	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MDPDLRNALLLLGLVFCAFFAAVTIYVIVDTGLRLKTYGDIGAIGLYGVSLLIIVMIAAGLIGALRNPPDD*
Ga0070696_1002781551	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LVGLIFCGFFAVVTIYVIVDTGLRLRTYGDIGAIGLYGVSLLIVVMIAAGLIGALRN
Ga0070693_1008392802	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LLGLIFCGFFAVVTIYVIVDTGLRLRTYGDIGAIGLYGVSLLIVVMIAAGLIGALRNPPDD*
Ga0070704_1000393813	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VDPDLRTALLLLGLVFCGFFAAVTLYVIADTGLSLRTYGDIGALGLYAISLLIIVMIAAGLIGALRNPPDD*
Ga0058697_101578182	3300005562	Agave	LDPDLRNALLLIGLLFCGFFAVVTLYVIVDTGLSLRTYGDIGAIMLYGVSLLVIGLIAAGLIGALRNPPDD*
Ga0066905_1000800733	3300005713	Tropical Forest Soil	LDPDLRNALLLLGLLFCGFFAVVTIYVIVDSGLNLRTYGDIGAIILYGISLLIIGLIAAGLIGALRNPPDD*
Ga0066905_1002104531	3300005713	Tropical Forest Soil	LDPDLRNALLLLGLIFCGFFAVITVYVIVDTGLRLRTYGDIGAIVLYGVSLLIVGLIAAGLIGALRNPPDD*
Ga0068861_1023348491	3300005719	Switchgrass Rhizosphere	LDPGLRTALLLLGLIFCGFFAVVTIYVIVDTGLRLRTYGDIGAIGLYGVSLLIVVMIAA
Ga0066903_1000313883	3300005764	Tropical Forest Soil	VLGLIFCGFFAVVTLDSIVETGIRLRTYGDIGAIGLYVISLLIVVMIAIGLIGALRNPPDE*
Ga0081455_1001216411	3300005937	Tabebuia Heterophylla Rhizosphere	LDPDLRNALLLLGLLFCGFFAVVTVYVIVDTGLRLRTYGDIGAIILYGVSLLIIGMIAAGLIGALRNPPDD*
Ga0081455_100441972	3300005937	Tabebuia Heterophylla Rhizosphere	VDPDLRNALLLLGLIFCGFFAVVTIYVIVDTGLSLRTYGDIGAIGLYGVSLGIVVLIAAGLIGALRNPPDD*
Ga0081455_101100281	3300005937	Tabebuia Heterophylla Rhizosphere	LDPDLRTALLLLGLVFCGFFAAVTIYVIVDTGLRFRTYGDIGAIGLYGVSLLIIVMIGAGLIGALRNPPDD*
Ga0081455_110585882	3300005937	Tabebuia Heterophylla Rhizosphere	LDPDLRNALLLLGLLFCGFFAVVTIYVIVDTGLRLRTYGDIGAIILYGISLLIIGMIAAGLIGALRNPPDD*
Ga0081538_100626943	3300005981	Tabebuia Heterophylla Rhizosphere	LDPDLRNALLLLGLIFCGGFAVVTIYVIVDTGLSVRTYGDLGAIVLYGISLLVVVLIASGLIGALRNPPDD*
Ga0081538_101122642	3300005981	Tabebuia Heterophylla Rhizosphere	LDPDLRNALLVLGLIFCGFFAVATLYVIVDTGLSLRTYGDIGAIALYGVSLLIVVMIAAGLIGALRNPPDD*
Ga0081540_10008062	3300005983	Tabebuia Heterophylla Rhizosphere	LDPDLRNALLLIGLLFCGFFAAITLYVIADTGLHLRTYGDIGAIILYGVSLLIIVMIAAGLIGALRNPPDD*
Ga0066652_1012288661	3300006046	Soil	MDPDLRNALLLLGLVFCAFFAAVTIYVIVDTGLRLRTYGDIGAIALYGVSLLIIVMIAAGLIGAL
Ga0075363_1000473051	3300006048	Populus Endosphere	MIGLIFCGFFFAVTVYVIADTGLHLRTYGDIGAIGLYGVSLLIVGMIAAG
Ga0075364_106549062	3300006051	Populus Endosphere	MIGLIFCGFFFAVTVYVIADTGLHLRTYGDIGAIGLYGISLLIVGMIAAGLLGALRNPPDD*
Ga0074055_114077852	3300006573	Soil	LDPDLRNALLLVGLIFCGFFAAVTVYVIVDTGLRFRTYGDIGAIGLYAVSLLIVGMIAAGLIGALRNPPDD*
Ga0074055_116106571	3300006573	Soil	LDPDLRNALLLIGLIFCGFFAAITIYVIVDTGLRLRTYGDIGAIALYGVSLGIVGMIAAGLIGALRNPPDD*
Ga0074053_116950811	3300006575	Soil	LDPDLRNALLLIGLIFCGFFAAITIYVIVDTGLRLRTYGDIGAIALYGVSLGIVGMIA
Ga0074047_100249486	3300006576	Soil	LDPDLRTALLLLGLIFCGFFAAVTLYVIADTGLHVRTYGDIGAIALYVVSLLIVAMIGAGLISALRNPPDD*
Ga0074057_116472581	3300006605	Soil	IFCGFFAVITIYVIVDTGLRLRTYGDIGAIALYGVSLGIVGMIAAGLIGALRNPPDD*
Ga0079222_121303162	3300006755	Agricultural Soil	LDPDLRNALLVIGLIFCGFFAAVTLYVIGDTGLRLRTYGDIGAIILYAISLLIVGMIAAGLIGALRNPPDD*
Ga0066665_105532462	3300006796	Soil	MDPDLRNALLLLGLVFCAFFAAVTIYVIVDTGLRLRTYGDIGAIALYGVSLLIIVMIAAGLIGALRNPPDD*
Ga0079220_100820873	3300006806	Agricultural Soil	LLLGLIFCGFFAAVTLYVIADTGLHLRTYGDIGAIALYVVSLGIVGMIAAGLIGALRNPPDD*
Ga0105237_115227732	3300009545	Corn Rhizosphere	LDPGLRTALLLLGLIFCGFFAVVTIYVIVDTGLRLRTYGDIGAIGLYGVSLLIVVMIAAGLIGALRNPPDD*
Ga0126307_1000004662	3300009789	Serpentine Soil	LDPDLRNALLLIGLLFCGFFAAVTIYVIVDTGLHLRTYGDIGAVILYGVSLLIIGMIAAGLIGAIQNPPDD*
Ga0126307_1000055124	3300009789	Serpentine Soil	MDPDLRNALLLLGLIFCGFFAAVTIYVIVDTGLHLRTYGDIGAIGLYGVSLLVVVMIGAGLLGALRNPPDD*
Ga0126307_100100145	3300009789	Serpentine Soil	LDPDLRNALLVLGLIFCGFFAVITLYVIADTGLHLKTYGDIGAIGLYGVSLLIVGMIAAGLIGALRNPPDD*
Ga0126307_101163282	3300009789	Serpentine Soil	LDPDLRNALLLIGLLFCGFFAAVTIYVIVDTGLRLETYGDIGAIILYGISLLIIGMIAAGLLGALRNPPDD*
Ga0126307_116810671	3300009789	Serpentine Soil	LDPDLRNALLLIGLLFCGFFAAVTIYVIVDTGLRLETYGDIGAIVLYGVSLLIIGMIAAGLLGALRNPPDD*
Ga0126313_100090947	3300009840	Serpentine Soil	VDPDLRNALLILGLIFCGFFAVVTTYVIVDTGLRLRTYGDIGAIALYGISLLIVLMIAAGLIGALRNPPDD*
Ga0126313_102584673	3300009840	Serpentine Soil	MDPDLRNALLITGLVFCGCFAAATLYVIADSGLRLRTYGDIGALALYGVALLIVGMIAAGLIGA
Ga0126313_103530681	3300009840	Serpentine Soil	LDPDLRNALLVLGLIFCGFFAVITMYVIADTGLHLKTYGDIGAIGLYAVSLLIVGMIAAGLIGALRNPPND*
Ga0126313_111907392	3300009840	Serpentine Soil	LDPDLRNVLLILGLIFCGFFAAVTVYVIVDTGLRLETYGDIGAIGLYSVSLLIVVMIAAGLLGALRNPPDD*
Ga0126305_107939392	3300010036	Serpentine Soil	LDPDLRNVLLILGLIFCGFFAAVTVYVIVDTGLGLRTYGDIGAIALYGVSLLIVVMIAAGLIGALR
Ga0126304_102050442	3300010037	Serpentine Soil	LDPDLRNVLLILGLIFCGFFAAVTVYVIVDTGLGLRTYGDIGAIALYGVSLLIVVMIAAGLIGALRNPPDD*
Ga0126304_107037131	3300010037	Serpentine Soil	LDPDLRNALLLLGLIFCGFFAVVTVYVSVDTGLRLRTYGDIGASGLYAVSLLIVVMIAAGLI
Ga0126304_108465512	3300010037	Serpentine Soil	LDPDLRNALLVLGLIFCGFFAVITLYVIADTGLHLKTYGDIGAIGLYGVSLLIVGMIAAGLIGALRNPPDD
Ga0126315_103130682	3300010038	Serpentine Soil	LDPDLRNALLLLGLIFCGFFAVVTVYVIVDTGLRLRTYGDIGAIGLYAVSLLIVVMIAAGLIGALRNPPDD*
Ga0126309_100005265	3300010039	Serpentine Soil	MDPDLRNALLIVGLIFCSFFAAVTLYVIVDTGLELRTYGDIGAIVLYGISLLIVVMIAAGLIGALRNPPDD*
Ga0126309_106597292	3300010039	Serpentine Soil	MDPDLRNALLITGLVFCGCFAAATLYVIADSGLRLRTYGDIGALALYGVALLIVGIIAAGLIGA
Ga0126312_100173943	3300010041	Serpentine Soil	MDPDLRNALLITGLVFCGCFAAATLYVIADSGLRLRTYGDIGALALYGVALLIVGMIAAGLIGAIRNPPPDE*
Ga0126310_101482122	3300010044	Serpentine Soil	LDPDLRNALLLIGLIFCGFFAAATIYVIVDTGLRLRTYGDIGAIGLYAVSLLIVGMIAAGLIGALRNPPDD*
Ga0126311_115293331	3300010045	Serpentine Soil	LDPDLRNALLVLGLIFCGFFAVITLYVIADTGLHLKTYGDIGAIGLYAVSLLIVGMIAAGLIGALRNPPND*
Ga0126306_100084626	3300010166	Serpentine Soil	MDPDLRNALLLTGLIFCGFFAAVTLYVIVDRGLRFETYGDLGALGLYAVSLLIIGMIAAGLIGAIRNPPDE*
Ga0126306_109348762	3300010166	Serpentine Soil	LDPDLRNALLLIGLLFCGFFAAVTIYVIVDTGLRLETYGDIGAIILYGVSLLIIGMIAAGLLGALRNPPDD*
Ga0126377_106197662	3300010362	Tropical Forest Soil	LDPDLRNALLLLGLIFCGFFAVVTVYVIVDTGLRLRTYGDIGAIILYGVSLLIIGMIAAGLIGALRNPPDD*
Ga0105239_116829352	3300010375	Corn Rhizosphere	LDPDLRNALLLLGLVFCGFFAAITIYVIVDTGLRLHTYGDIGAIGLYGVSLLIIGMIAAGLIGALRNPPDD*
Ga0137364_111001902	3300012198	Vadose Zone Soil	LDPDLRNALLIIGLIFCGFFAAVTLYVIADTGLRLRTYGDIGAIGLYAISLLIVVMIAAGLIGALRNPPDD*
Ga0137374_108809312	3300012204	Vadose Zone Soil	LNPDLRNALLLLGLIFCGFFAVVTIYVIVDTGLRLRTYGDIGAIALYGVSLGIVGMIAAGLIGALRNPPDD*
Ga0137376_104910712	3300012208	Vadose Zone Soil	LDPDLRNALLILGLIFCGFFAAVTLYVIADTGLHLRTYGDIGAIALYGVSLLIVVMIAAGLIGALRNPPDD*
Ga0137370_103524932	3300012285	Vadose Zone Soil	LDPDLRNALLILGLIFCGFFAAVTLYVIADTGLHLRTYGDIGAIALYGVSLLIVVMIAAGLIGALRNP
Ga0137367_109903531	3300012353	Vadose Zone Soil	LDPDLRNALLLIGLVFCGFFAAVTLYVIVDTGLHFRTYGDIGAVGLYGVSLGIVGMIAAGLIG
Ga0137369_105328042	3300012355	Vadose Zone Soil	LDPDLRNALLLLGLIFCGFFAAVTVYVIVDTGLRLRTYGDIGAIALYGVSLGIVGMIAAGLIGALRNPPDD*
Ga0137369_106431431	3300012355	Vadose Zone Soil	LLLGLLFRGFFAVVTIYVIVDTGLRLRTYGDIGAIGLYGVSLAIVVMIAAGLIGALRNPPDD*
Ga0137371_108198562	3300012356	Vadose Zone Soil	GLVFCAFFAAVTIYVIVDTGLRLRTYGDIGAIALYGVSLLIIVMIAAGLIGALRNPPDD*
Ga0137368_100841512	3300012358	Vadose Zone Soil	LNPDLRNALLLLGLIFCGFFAVVTIYVIVDTGLRLRTYGDIGAIGLYAVSLLIVVMIASGLIGALRNPPDD*
Ga0137375_104835022	3300012360	Vadose Zone Soil	ALLLLGLIFCGFFAVVTIYVIVDTGLRLRTYGDIGAIGLYAVSLLIVVMIASGLIGALRNPPDD*
Ga0157283_104114642	3300012907	Soil	LVGLIFCGFFAVVTIYVIVDTGLRLRTYGDIGAIGLYGVSLLIVVMIAAGLIGALRNPPDD*
Ga0157286_100575021	3300012908	Soil	LDPDLRNALLIVGLIFCGFFAAVTLYVIVDSGLRLRTYGDIGAIALYGVSLLIVVMIAA
Ga0164300_102474052	3300012951	Soil	LDPDLRNALLLTGLLFCGFFAAVTLYVIADTGLHLRTYGDIGAIILYGVSLLIIVMIAAGLIGALRNPPDD*
Ga0126369_115143072	3300012971	Tropical Forest Soil	LDPDLRTALLVLGLIFCGFFAVVTLDSIVETGIRLRTYGDIGAIGLYVISLLIVVMIAIGLIGALRNPPDE*
Ga0134087_103502761	3300012977	Grasslands Soil	LGLIFCGFFAAVTIFVIVDTGLHLRTYGDIGAVGLYGVSLLIVVMIGAGLIGALRNPPDD
Ga0164304_104658792	3300012986	Soil	VDPDLRTALLLLGLIFCGFFAAVTLYVIADTGLSLRTYGDIGALGLYAVSLLIIVMIAAGLIGALRNPPDD*
Ga0132258_107080473	3300015371	Arabidopsis Rhizosphere	LDPDLRNALLIIGLIFCGFFAAITLYVIADTGLHLRTYGDIGAIGLYGVSLLIIVMIAAGLIGALRNPPDD*
Ga0190266_101801802	3300017965	Soil	LIIGLLFCGFFAAVTLYVIVDSGLRLRTYGDIGAIVLYGVSLLIVVLIATGLIGALRNPPDD
Ga0066655_111047712	3300018431	Grasslands Soil	MDPDLRNALLLLGLVFCAFFAAVTIYVIVDTGLRLRTYGDIGAIALYGVSLLIIVMIAAGLIGALRNPPDD
Ga0066667_104803652	3300018433	Grasslands Soil	MDPDLRNALLLLGLVFCAFFAAVTIYVIVDTGLRLRTYGDIGAIALYGVSLLIVVMIAAGLIGALRNPPDD
Ga0190269_118372721	3300018465	Soil	TTGVLFCGFFAAVTLYVIVDSGLRLRTYGDIGAMVLYGVSLLIVVLIATGLIGALRNPPD
Ga0173482_102424572	3300019361	Soil	LDPDLRTALLLLGLIFCGFFAAVTLYVIADTGLHVRTYGDIGAIALYVVSLLIVVMIGAGLIGALRNPPDD
Ga0179590_11638482	3300020140	Vadose Zone Soil	MDPDLRNALLGIGLVFCGFFAVVTIYVIVDTGLHLRTYGDIGAIGLYAVSLLIVGMIAAGLIGAIRNPPPDD
Ga0179594_102236682	3300020170	Vadose Zone Soil	LDPDLRNALLLLGLIFCSFFAVVTIYSIVDTGLRLRTYGDIGAIGLYALSLLIVVMIAAGLIGALRNPPDD
Ga0222622_104956401	3300022756	Groundwater Sediment	LDPDLRNALLLVGLLFCGFFAAVTLYVIADTGLHLRTYGDIGAIILYGVSLLIIVMIGAGLIGALRNPPDD
Ga0247693_10342932	3300024181	Soil	VDPDLRTALLLLGLIFCGFFAAVTLYVIADTGLSLRTYGDIGALGLYAISLLIIVMIAAGLIGALRNPPDD
Ga0179589_103180352	3300024288	Vadose Zone Soil	MDPDLRNALLLIGLLFCGFFAVVTVYVIVDTGLRLRTYGDIGAIGLYAVSLLIVVMIAAGLIGALRNPPDD
Ga0210142_10029682	3300025552	Natural And Restored Wetlands	VDPDLRNALLLLGLIFCGFFAAVTIYVIVDTGLRLRTYGDIGAIGLYVVSLAIVLMIAAGLIGALRNPPDE
Ga0207687_109169582	3300025927	Miscanthus Rhizosphere	LDPDLRNALLLLGLVFCGFFAAITIYVIVDTGLRLHTYGDIGAIGLYGVSLLIIGMIAAGLIGALRNPPDD
Ga0307291_11537332	3300028707	Soil	LDPDLRNALLAIGLLFCGFFAAVTIYVIGDTGLHLRTYGDIGAIILYGVSLLIIGMIAAGLIGALRNPPDD
Ga0307309_101641852	3300028714	Soil	LDPDLRNALLAIGLLFCGFFAAVTIYVIGDTGLHLRTYGDFGAIILYGVSLLIIGMIAAGLIGALRNPPDD
Ga0307317_101222531	3300028720	Soil	LDPDLRNALLLLGLVFCGFFAAVTIYVIVDTGLTLRTYGDIGAIGLYAVSLLIVVMIAAGLIGALRNPPDD
Ga0307317_103401691	3300028720	Soil	LDPDLRNALLAIGLLFCGFFAAVTIYVIGDTGLHLRTYGDIGAIILYGVSLLIIGMIAAGLIGALRNPP
Ga0307316_100660812	3300028755	Soil	LDPDLRNALLLLGLIFCGFFAAVTIYVIVDTGLTLRTYGDIGAIGLYAVSLLIVVMIAAGLIGALRNPPDD
Ga0307320_102633992	3300028771	Soil	LDPDLRTALLLLGLVFCGFFAAVTIYVIVDTGLRLKTYGDIGAIGLYGVSLLIIVMIGAGLIGALRNPPDD
Ga0307306_101078112	3300028782	Soil	LDPDLRNALLAIGLIFCGFFAAVTIYVIGDTGLHLRTYGDIGAIILYGISLLIIGMIAAGLIGALRNPPDD
Ga0307282_102919101	3300028784	Soil	LDPDLRNALLAIGLLFCGFFAAVTIYVIGDTGLHLRTYGDIGAIILYGVSLLIIGMIAAGLI
Ga0307299_101417762	3300028793	Soil	LDPDLRNALLLLGLIFCGFFAAVTIYVIVDTGLTLRTYGDIGAIGLYAVSLLIVVMIAAG
Ga0307302_102153032	3300028814	Soil	LDPDLRNALLLLGLIFCGFFAVITVYVIVDVGLHLRTYGDIGAIALYGVSLGIIGMIAAGLIGALRNPPDD
Ga0307312_105857962	3300028828	Soil	MDPDLRNALLMIGLIFCGFFAAITLYVIADTGLHLRTYGDIGAIGLYGVSLLIIGMIAAGLIGALRN
Ga0307289_102064972	3300028875	Soil	LDPDLRNALLAIGLLFCGFFAAVTIYVIGDTGLHLRTYGDIGAIILYGISLLIIGMIAAGLIGALRNPPDD
Ga0307286_102701352	3300028876	Soil	PDLRNALLLLGLIFCGFFAAVTIYVIVDTGLTLRTYGDIGAIGLYAVSLLIVVMIAAGLIGALRNPPDD
Ga0268386_109836931	3300030619	Soil	MDPDLRNALLLTGLIFCGFFAAVTLYVIVDRGLRFETYGDLGALGLYAVSLLIIGMIAAGLIGAIRNPPDE
Ga0299914_107656312	3300031228	Soil	MTGLIFCGFFAAVTLYVIFDRGLRFETYGDLGALALYAVSLLIIGMIAAGLIGAIRNPPPDE
Ga0307468_1000800783	3300031740	Hardwood Forest Soil	LDPDLRNALLVLGLLFCGFFAVVTVYVIADTGLHLRTYGDIGAIVLYGISLLIIVMIAAGLLGALRNPPDD
Ga0308175_1002964512	3300031938	Soil	LDPDLRNALLLIGLIFCGFFAAVTVYVIADTGLHLRTYGDIGAIGLYAVSLLIVVMIAAGLLGALRNPPDD
Ga0268251_102842722	3300032159	Agave	LDPDLRNALLLIGLLFCGFFAVVTLYVIVDTGLSLRTYGDIGAIMLYGVSLLVIGLIAAGLIGALRNPPDD
Ga0268251_105837631	3300032159	Agave	LDPDLRNALLLIGLLFCGFFAVVTLYVIVDTGLSLRTYGDLGAIILYGVSLLIVGLIAAGLIGALRNPPDD
Ga0307472_1000295183	3300032205	Hardwood Forest Soil	LDPDLRNALLVLGLLFCGFFAVVTIYVIADTGLHLRTYGDIGAIILYGISLLIIGMISAGLIGALRNPPDD
Ga0326726_122861492	3300033433	Peat Soil	VDPDLRNALLLLGLVFCGFFAAVTIYVIVDTGLRLRTYGDIGAIGLYAVSLLIVGMIAAGLIGALRNPPDD
Ga0247830_109201081	3300033551	Soil	LDPDLRNALLIIGLLFCGFFAAVTLYVIVDSGLRLRTYGDIGAMVLYGVSLLIVVLIATGLIGALRNPPDD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052578

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences