Metagenome / Metatranscriptome Family F052496

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F052496
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	75 residues
Representative Sequence	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE
Number of Associated Samples	106
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	39.57 %
% of genes near scaffold ends (potentially truncated)	26.76 %
% of genes from short scaffolds (< 2000 bps)	76.06 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.479 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (34.507 % of family members)
Environment Ontology (ENVO)	Unclassified (63.380 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.493 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 32.00% β-sheet: 4.00% Coil/Unstructured: 64.00%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00578	AhpC-TSA	26.06
PF00156	Pribosyltran	9.86
PF02729	OTCace_N	4.93
PF00581	Rhodanese	2.82
PF00515	TPR_1	2.82
PF08534	Redoxin	2.11
PF01979	Amidohydro_1	1.41
PF05685	Uma2	1.41
PF00988	CPSase_sm_chain	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0505	Carbamoylphosphate synthase small subunit	Amino acid transport and metabolism [E]	1.41
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	1.41

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.48 %
Unclassified	root	N/A	3.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.48 %
Unclassified	root	N/A	3.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.48 %
Unclassified	root	N/A	3.52 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	54.93 %
Unclassified	root	N/A	3.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.11 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.70 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	47.89 %
Unclassified	root	N/A	3.52 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.11 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	47.89 %
Unclassified	root	N/A	3.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.41 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	42.25 %
Unclassified	root	N/A	3.52 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.70 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.70 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	42.25 %
Unclassified	root	N/A	3.52 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.70 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.70 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	42.25 %
Unclassified	root	N/A	3.52 %
Labilitrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae	0.70 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.70 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	42.25 %
Unclassified	root	N/A	3.52 %
Labilithrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix	0.70 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.70 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	42.25 %
Unclassified	root	N/A	3.52 %
Labilithrix luteola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	0.70 %
Frankia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	0.70 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10076457	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1051	Open in IMG/M
3300002558\|JGI25385J37094_10077083	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300002908\|JGI25382J43887_10061448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2034	Open in IMG/M
3300002912\|JGI25386J43895_10020339	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1949	Open in IMG/M
3300005166\|Ga0066674_10019285	All Organisms → cellular organisms → Bacteria → Proteobacteria	2928	Open in IMG/M
3300005166\|Ga0066674_10117862	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300005166\|Ga0066674_10213300	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	918	Open in IMG/M
3300005172\|Ga0066683_10102964	All Organisms → cellular organisms → Bacteria → Proteobacteria	1733	Open in IMG/M
3300005174\|Ga0066680_10100862	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300005175\|Ga0066673_10220534	All Organisms → cellular organisms → Bacteria → Proteobacteria	1090	Open in IMG/M
3300005175\|Ga0066673_10278423	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300005176\|Ga0066679_10653358	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	685	Open in IMG/M
3300005178\|Ga0066688_10143906	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300005445\|Ga0070708_100429594	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300005446\|Ga0066686_10416354	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	918	Open in IMG/M
3300005446\|Ga0066686_10761578	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	648	Open in IMG/M
3300005468\|Ga0070707_100246736	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300005518\|Ga0070699_100807282	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	859	Open in IMG/M
3300005536\|Ga0070697_100589345	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300005552\|Ga0066701_10757738	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	580	Open in IMG/M
3300005552\|Ga0066701_10862568	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300005553\|Ga0066695_10060312	All Organisms → cellular organisms → Bacteria → Proteobacteria	2272	Open in IMG/M
3300005553\|Ga0066695_10577326	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	678	Open in IMG/M
3300005554\|Ga0066661_10150898	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300005555\|Ga0066692_10017406	All Organisms → cellular organisms → Bacteria → Proteobacteria	3571	Open in IMG/M
3300005555\|Ga0066692_10135425	All Organisms → cellular organisms → Bacteria → Proteobacteria	1500	Open in IMG/M
3300005556\|Ga0066707_10421187	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	867	Open in IMG/M
3300005557\|Ga0066704_10082102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2092	Open in IMG/M
3300005561\|Ga0066699_10615934	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	780	Open in IMG/M
3300005566\|Ga0066693_10235948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	721	Open in IMG/M
3300005568\|Ga0066703_10241812	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1097	Open in IMG/M
3300005598\|Ga0066706_10522027	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	945	Open in IMG/M
3300006031\|Ga0066651_10393946	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	739	Open in IMG/M
3300006034\|Ga0066656_10185621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1317	Open in IMG/M
3300006034\|Ga0066656_11010973	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300006046\|Ga0066652_101202937	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	717	Open in IMG/M
3300006796\|Ga0066665_10822135	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	730	Open in IMG/M
3300007255\|Ga0099791_10006432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4841	Open in IMG/M
3300007258\|Ga0099793_10366982	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	705	Open in IMG/M
3300007265\|Ga0099794_10003458	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6029	Open in IMG/M
3300009038\|Ga0099829_10225628	All Organisms → cellular organisms → Bacteria → Proteobacteria	1522	Open in IMG/M
3300009088\|Ga0099830_11036874	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	680	Open in IMG/M
3300009089\|Ga0099828_10583211	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1007	Open in IMG/M
3300009090\|Ga0099827_10639935	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	918	Open in IMG/M
3300009137\|Ga0066709_102010895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	800	Open in IMG/M
3300009137\|Ga0066709_103382137	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	580	Open in IMG/M
3300009143\|Ga0099792_10255999	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1021	Open in IMG/M
3300010303\|Ga0134082_10024412	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300010304\|Ga0134088_10130569	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300010304\|Ga0134088_10617233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300010320\|Ga0134109_10132891	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300010320\|Ga0134109_10133300	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	885	Open in IMG/M
3300010321\|Ga0134067_10253039	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	665	Open in IMG/M
3300010322\|Ga0134084_10011627	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2234	Open in IMG/M
3300010326\|Ga0134065_10156861	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	798	Open in IMG/M
3300010326\|Ga0134065_10372309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300010329\|Ga0134111_10176586	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	856	Open in IMG/M
3300010336\|Ga0134071_10204813	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	974	Open in IMG/M
3300010336\|Ga0134071_10217148	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	946	Open in IMG/M
3300011270\|Ga0137391_10282747	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300011271\|Ga0137393_10944543	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	735	Open in IMG/M
3300012096\|Ga0137389_10288916	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300012189\|Ga0137388_10108057	All Organisms → cellular organisms → Bacteria	2403	Open in IMG/M
3300012199\|Ga0137383_10241569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	1324	Open in IMG/M
3300012199\|Ga0137383_10291051	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300012200\|Ga0137382_10167107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1499	Open in IMG/M
3300012202\|Ga0137363_10958689	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300012202\|Ga0137363_11504021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300012206\|Ga0137380_11362823	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300012207\|Ga0137381_10232174	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300012207\|Ga0137381_10844996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	793	Open in IMG/M
3300012207\|Ga0137381_11590296	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300012211\|Ga0137377_11062653	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	740	Open in IMG/M
3300012211\|Ga0137377_11278745	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	664	Open in IMG/M
3300012349\|Ga0137387_10061523	All Organisms → cellular organisms → Bacteria	2534	Open in IMG/M
3300012351\|Ga0137386_10016350	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4991	Open in IMG/M
3300012361\|Ga0137360_10086313	All Organisms → cellular organisms → Bacteria	2367	Open in IMG/M
3300012361\|Ga0137360_11774831	Not Available	523	Open in IMG/M
3300012362\|Ga0137361_10393459	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300012582\|Ga0137358_10118895	All Organisms → cellular organisms → Bacteria	1795	Open in IMG/M
3300012917\|Ga0137395_10055082	All Organisms → cellular organisms → Bacteria	2517	Open in IMG/M
3300012923\|Ga0137359_11378626	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	593	Open in IMG/M
3300012929\|Ga0137404_11560827	Not Available	612	Open in IMG/M
3300012930\|Ga0137407_10905777	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	834	Open in IMG/M
3300012975\|Ga0134110_10186710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	866	Open in IMG/M
3300012975\|Ga0134110_10246753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	759	Open in IMG/M
3300012976\|Ga0134076_10553881	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300014154\|Ga0134075_10045752	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300014154\|Ga0134075_10365063	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	634	Open in IMG/M
3300014157\|Ga0134078_10208360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	801	Open in IMG/M
3300015358\|Ga0134089_10509990	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	528	Open in IMG/M
3300017656\|Ga0134112_10150306	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	896	Open in IMG/M
3300017657\|Ga0134074_1194080	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	719	Open in IMG/M
3300018431\|Ga0066655_10031689	All Organisms → cellular organisms → Bacteria	2582	Open in IMG/M
3300018431\|Ga0066655_10035613	All Organisms → cellular organisms → Bacteria	2465	Open in IMG/M
3300018431\|Ga0066655_10076749	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300018431\|Ga0066655_10143493	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300018431\|Ga0066655_10395666	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	911	Open in IMG/M
3300018433\|Ga0066667_10014956	All Organisms → cellular organisms → Bacteria	3911	Open in IMG/M
3300018433\|Ga0066667_10367884	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300018433\|Ga0066667_10384083	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300018482\|Ga0066669_10167117	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300020170\|Ga0179594_10090758	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1088	Open in IMG/M
3300025922\|Ga0207646_10073445	All Organisms → cellular organisms → Bacteria → Proteobacteria	3055	Open in IMG/M
3300026296\|Ga0209235_1280661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300026297\|Ga0209237_1099171	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1282	Open in IMG/M
3300026298\|Ga0209236_1031622	All Organisms → cellular organisms → Bacteria	2819	Open in IMG/M
3300026307\|Ga0209469_1014692	All Organisms → cellular organisms → Bacteria	2847	Open in IMG/M
3300026307\|Ga0209469_1019914	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300026309\|Ga0209055_1095140	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300026313\|Ga0209761_1087692	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300026314\|Ga0209268_1022908	All Organisms → cellular organisms → Bacteria	2247	Open in IMG/M
3300026316\|Ga0209155_1017569	All Organisms → cellular organisms → Bacteria	3036	Open in IMG/M
3300026323\|Ga0209472_1034423	All Organisms → cellular organisms → Bacteria	2289	Open in IMG/M
3300026326\|Ga0209801_1015930	All Organisms → cellular organisms → Bacteria → Proteobacteria	3770	Open in IMG/M
3300026326\|Ga0209801_1142333	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1016	Open in IMG/M
3300026327\|Ga0209266_1234070	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	607	Open in IMG/M
3300026334\|Ga0209377_1035258	All Organisms → cellular organisms → Bacteria	2355	Open in IMG/M
3300026334\|Ga0209377_1068675	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300026342\|Ga0209057_1042630	All Organisms → cellular organisms → Bacteria	2230	Open in IMG/M
3300026524\|Ga0209690_1174773	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	725	Open in IMG/M
3300026528\|Ga0209378_1034215	All Organisms → cellular organisms → Bacteria	2636	Open in IMG/M
3300026528\|Ga0209378_1055459	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300026532\|Ga0209160_1048436	All Organisms → cellular organisms → Bacteria	2481	Open in IMG/M
3300026536\|Ga0209058_1136556	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1183	Open in IMG/M
3300026537\|Ga0209157_1149672	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300026537\|Ga0209157_1358307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300026550\|Ga0209474_10264579	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300026550\|Ga0209474_10289709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	976	Open in IMG/M
3300027655\|Ga0209388_1003053	All Organisms → cellular organisms → Bacteria	4116	Open in IMG/M
3300027748\|Ga0209689_1035100	All Organisms → cellular organisms → Bacteria	2942	Open in IMG/M
3300027846\|Ga0209180_10403973	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	774	Open in IMG/M
3300027875\|Ga0209283_10549364	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	738	Open in IMG/M
3300031720\|Ga0307469_12247881	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300031754\|Ga0307475_10255241	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1405	Open in IMG/M
3300031820\|Ga0307473_10077604	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300031962\|Ga0307479_10551913	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1135	Open in IMG/M
3300032180\|Ga0307471_100218661	All Organisms → cellular organisms → Bacteria	1926	Open in IMG/M
3300032180\|Ga0307471_100264756	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.37%
Loam	Environmental → Terrestrial → Soil → Loam	5.63%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	47.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.52%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	34.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.52%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.11%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012388	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100764571	3300002558	Grasslands Soil	MRSLFRRARRRSLMPRLLAKRASRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE*
JGI25385J37094_100770833	3300002558	Grasslands Soil	IMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE*
JGI25382J43887_100614482	3300002908	Grasslands Soil	MLSLFGRAXRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE*
JGI25386J43895_100203394	3300002912	Grasslands Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASGERRAEAARVLRVHESICPGGQRAGEVATPFE*
Ga0066674_100192855	3300005166	Soil	MLSLFGRARRRSLMPRLLTKRVPRRLPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0066674_101178622	3300005166	Soil	MPRLLARRVPRRAPSVIGACAVCGVKFAASRKHRAEVARVLRVHETICPGGHRSGEVATPFE*
Ga0066674_102133001	3300005166	Soil	ARRRSLMPRLLTKRVPRRRPSVVGTCGVCGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE*
Ga0066674_104462681	3300005166	Soil	APSVVGACGVCGIKFAASRGRQADTARVLCVHETICPGGERSGEVATPYE*
Ga0066683_101029644	3300005172	Soil	MLSLFGRARRRSLMPRLLTKRVPRRLPSVVGACGVCGVQFAASRERRAETAHVLHVHESICPGGQRAGEVATPFE*
Ga0066680_101008622	3300005174	Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE*
Ga0066673_102205342	3300005175	Soil	MKTNLLSLFGRARRRSLMSRLLTKRVSAPSVVGACGVCGIKFAASRGRQADTARVLCVHETICPGGERSGEVATPYE*
Ga0066673_102784232	3300005175	Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRARRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0066679_106533581	3300005176	Soil	AGSRGIALAPDPRMRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRARRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0066688_101439062	3300005178	Soil	MPRLLARRVPHRAPSVIGACAVCGVKFAASREHRAEVARVLRVHETICPGGHRSGEVATPFE*
Ga0070708_1004295942	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGTCGVCGVQFAASRERRAEATRVLRVHESICPGGQRAGEVATPFE*
Ga0066686_104163542	3300005446	Soil	ARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE*
Ga0066686_107615781	3300005446	Soil	MLSLFGRARRRSLRSRLLTNRVARRSPSVVGACGVCGVTFAASRERQAEAARVLRVHESICPGGQRSGEVATPFE*
Ga0070707_1002467362	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLSLFRRARRRSLMPRLLAKRAPRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE*
Ga0070699_1008072822	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGTCGVCGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE*
Ga0070697_1005893452	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLSLFQRARRRSLMPRLLTKRVPRRRPSVVGTCGVCGVQFAASRERRAEATRVLRVHESICPGGQRAGEVATPFE*
Ga0066701_107577382	3300005552	Soil	MAGLLARRVPRRAPRVIGACAVCGVKFAASREHRAEVARVLRVHETICPGGHRSGEVATPFE*
Ga0066701_108625682	3300005552	Soil	AGSRGIALAPDPRMRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE*
Ga0066695_100603124	3300005553	Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGTCGVCGVQFAASRERRVEAARVLRVHESICPGGQRAGEVATPFE*
Ga0066695_105773261	3300005553	Soil	PGMKTNLLSLFGRARRRSLMSRLLTKRVSAPSVVGACGVCGIKFAASRGRQADTARVLCVHETICPGGERSGEVATPYE*
Ga0066661_101508983	3300005554	Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASGERRAEAARVLRVHESICPGGQRAGEVAT
Ga0066692_100174064	3300005555	Soil	MPRLLAKRASRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE*
Ga0066692_101354254	3300005555	Soil	ARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASGERRAEAARVLRVHESICPGGQRAGEVATPFE*
Ga0066707_104211871	3300005556	Soil	GRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRARRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0066704_100821025	3300005557	Soil	MLSLLGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE*
Ga0066699_106159341	3300005561	Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGTCRMCGVQFAASRERRAETTRVLRVHESICPGGQRAGEVATPFE*
Ga0066693_102359482	3300005566	Soil	MRSLFGRARRRSLMPRLLTKRVPRRLPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0066703_102418121	3300005568	Soil	MLSLFGRARRRSLMPRLLAKRAPRRRPSVVGACGVCGVQFAASRARRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0066706_105220272	3300005598	Soil	MSRLLTKRVSRRAPSVVGACGVCGIKFAASRERQADTARVLCVHETICPGGERSGEVATPYE*
Ga0066651_103939462	3300006031	Soil	MRSLFRRAQRRSLMPRLLAKRASRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE*
Ga0066656_101856213	3300006034	Soil	MSRLLTKRVSRRAPSVVGACGVCGIKFAASRGRQADTARVLCVHETICPGGERSGEVATPYE*
Ga0066656_110109732	3300006034	Soil	LMPRLLTKRVPRRLPSVVGACGVCGVQFAASRERRAETAHVLHVHESICPGGQRAGEVATPFE*
Ga0066652_1012029371	3300006046	Soil	TLRTWAGSRGTALARNPGMKTNLLSLFGRARRRSLMSRLLTKRVSAPSVVGACGVCGIKFAASRGRQADTARVLCVHETICPGGERSGEVATPYE*
Ga0066665_108221353	3300006796	Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0099791_100064325	3300007255	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTSRVPRRRPSVVGTCGVCGVQFAASRERRAEATRVLRVHESICPGGQRAGEVATPFE*
Ga0099793_103669821	3300007258	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASGERRAEAARVLRVHESICPGGQRAGEVATPFE*
Ga0099794_100034584	3300007265	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGTCGVCGVQFAASRERRAEATRVLRVHESICPGGQRAGEVATPFE*
Ga0099829_102256281	3300009038	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGACGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE*
Ga0099830_110368742	3300009088	Vadose Zone Soil	MRTIMRSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETARVLRVHESICPGGQRTGEVATPFE*
Ga0099828_105832111	3300009089	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGTCGVCGVQFAASRERRAEAGRVLRVHESICPGGQRAGEVATPFE*
Ga0099827_106399351	3300009090	Vadose Zone Soil	MRTITLSLFGRARRRSLMPRLLTKRVPRRPPSVVGACAMCGVAFAASRERQAEAARVLHVHESICPGGQRAGEVATPFE*
Ga0066709_1020108951	3300009137	Grasslands Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE*
Ga0066709_1033821371	3300009137	Grasslands Soil	MRTIMRSLFRRAQRRSLMPRLLAKRASRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE*
Ga0099792_102559991	3300009143	Vadose Zone Soil	PRMRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE*
Ga0134082_100244124	3300010303	Grasslands Soil	MRTIMRSLFRRARRRSLMPRLLAKRASRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE*
Ga0134088_101305692	3300010304	Grasslands Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRLPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0134088_106172331	3300010304	Grasslands Soil	MRKIMLSLFGRARRRSLRSRLLTNRVARRSPVVGACGVCGVTFAASRERQAEAARVLRVHESICPGGQRSGEVATPFE*
Ga0134109_101328911	3300010320	Grasslands Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRLPSVVGACGVCGVQFAASRERRAETAHVLHVHESICPGGQRAGEVATPFE*
Ga0134109_101333001	3300010320	Grasslands Soil	MKTNLLSLFGRARRRSLMSRLLTKRVSRRAPSVVGACGVCGIKFAASRGRQADTARVLCVHETICPGGERSGEVATPYE*
Ga0134067_102530391	3300010321	Grasslands Soil	MRTIMLSLFGRARRRSLMPRLLAKRASRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE*
Ga0134084_100116274	3300010322	Grasslands Soil	MPRLLTKRVPHRLPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0134065_101568612	3300010326	Grasslands Soil	GTALARNPGMKTNLLSLFGRARRRSLMSRLLTKRVSAPSVVGACGVCGIKFAASRGRQADTARVLCVHETICPGGERSGEVATPYE*
Ga0134065_103723092	3300010326	Grasslands Soil	MRTITLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETAHVLHVHESICPGGQRAGAVATPFE*
Ga0134111_101765861	3300010329	Grasslands Soil	MKTNLLSLFGRARRRSLMSRLLTKRVSAPSVVGACGVCGIKFAASRGRQADTARVLCVHETICPGGERSGEVATPYE
Ga0134071_102048132	3300010336	Grasslands Soil	MRKIIMSFFGRAQRRSLMPRLLTKRVPRRAPSVVGACGVCGVKFTASRERQADTARVLRVHESICPGGQRSGEVATPFE*
Ga0134071_102171482	3300010336	Grasslands Soil	MRTIMRSLFRRARRRSLMPRLLAKRAPRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE*
Ga0137391_102827473	3300011270	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSMVGACGVCGVQFAAARERRAEAARVLRVHESICPGGQRAGEVATPFE*
Ga0137393_109445432	3300011271	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLSKRVPRRRPSVVGACGVCGVQFAASRERRAETARVLRVHESICPGGQRTGEVATPFE*
Ga0137389_102889162	3300012096	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLSKRVPRRRPSVVGACGVCGVQFAASRERRAEATRVLRVHESICPGGQRAGEVATPFE*
Ga0137388_101080573	3300012189	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETARVLRVHESICPGGQRTGEVATPFE*
Ga0137364_108464311	3300012198	Vadose Zone Soil	RLLTKRVSAPSVVGACGVCGIKFAASRGRQADTARVLCVHETICPGGERSGEVATPYE*
Ga0137383_102415693	3300012199	Vadose Zone Soil	GIALAPDPRMRTIMLSLFGRARRRSLMPRLLTKRVPRRLPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0137383_102910511	3300012199	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRLPSVVGACRVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0137382_101671073	3300012200	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0137363_109586891	3300012202	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGTCGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0137363_115040211	3300012202	Vadose Zone Soil	MRTIMWSLFRRARRRSLMPRLLAKRAPRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE*
Ga0137380_113628231	3300012206	Vadose Zone Soil	RARRRSLMPRLLAKRAPRRAPSVVGVCGVCGVKFAASRERRAEAARVLHVHESICPGGQRAGEVATPFE*
Ga0137381_102321743	3300012207	Vadose Zone Soil	MRTIMRSLFQRARRRSLMPRLLAKRAPRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE*
Ga0137381_108449961	3300012207	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQR
Ga0137381_115902961	3300012207	Vadose Zone Soil	MRTIMLSLFGRARRRSPMPRLLTKRVPRRRPSVVGTCRVCGVQFAASRERRAEATRVLRVHESICPGGQRAGEVATPFE*
Ga0137377_110626532	3300012211	Vadose Zone Soil	PRMRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETAHVLHVHESICPGGQRAGEVATPFE*
Ga0137377_112787451	3300012211	Vadose Zone Soil	MKTNLLSLFGRARRRSLMSRLLTKRVSRRAPSVVGACGVCGIKFAASRGRQADTARVLCVHETICPG
Ga0137387_100615235	3300012349	Vadose Zone Soil	MRTIMLSLFGRARRRSPMPRLLTKRVPRRRPSVVGACGVCGVQFAASRARRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0137386_100163502	3300012351	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRSSVVGACGVCGVQFAASRARRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0137360_100863135	3300012361	Vadose Zone Soil	FGRARRRSLMPRLLTKRVPRRRPSVVGTCGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0137360_117748311	3300012361	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAEATRVLRVHESICPGGQRAGEVATPFE*
Ga0137361_103934591	3300012362	Vadose Zone Soil	MGTIMRSLFRRARRRSLMPRLLAKRASRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE*
Ga0134031_13000322	3300012388	Grasslands Soil	LTKRVSRRAPSVVGACGVCGIKFAASRGRQADTARVLCVHETICPGGERSGEVATPYE*
Ga0137358_101188953	3300012582	Vadose Zone Soil	MPRLLAKRAPRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE*
Ga0137395_100550822	3300012917	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRADTARVLHVHESICPGGQRAGEVATPFE*
Ga0137359_113786262	3300012923	Vadose Zone Soil	RRSLIPRLLTKRVPRRRPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE*
Ga0137404_115608271	3300012929	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVA
Ga0137407_109057772	3300012930	Vadose Zone Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVAMPFE*
Ga0134110_101867102	3300012975	Grasslands Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRLPSVVGACGVCGVQFAASRERRAEAARVLHVHESICPGGQRAGEIATPFE*
Ga0134110_102467532	3300012975	Grasslands Soil	MPRLLTKRVPRRLPSVVGACGVCGVQFAASRARRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0134076_105538812	3300012976	Grasslands Soil	WETGAGSHGIALAPRAGMRTTMLSLFGRARRRSLMPRLLAKRASRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE*
Ga0134075_100457522	3300014154	Grasslands Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRARRAETARVLHVHESICPGGQRAGEVATPFE*
Ga0134075_103650632	3300014154	Grasslands Soil	IALAPRAGMRTTMLSLFGRARRRSLMPRLLTQRVPRRRPRVVGACGVCGVQFAASRDRRAEAARVLRVHESICPGGQRSGEVATPFE*
Ga0134078_102083602	3300014157	Grasslands Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETAHVLHVHESICPGGQRAGAVATPFE*
Ga0134089_105099901	3300015358	Grasslands Soil	MRKIMLSLFGRARRRSLRSRLLTNRVARRSPVVGACGVCGVTFAASRERQAEAARVLRVHESICPGGQRSGEVATPFE
Ga0134112_101503062	3300017656	Grasslands Soil	MSFFGRAQRRSLMPRLLTKRVPRRAPSVVGACGVCGVKFTASRERQADTARVLRVHESICPGGQRSGEVATPFE
Ga0134074_11940802	3300017657	Grasslands Soil	RGTALARNPGMKTNLLSLFGRARRRSLMSRLLTKRVSRRAPSVVGACGVCGIKFAASRGRQADTARVLCVHETICPGGERSGEVATPYE
Ga0066655_100316894	3300018431	Grasslands Soil	MPRLLARRVPRRAPSVIGACAVCGVKFAASRKHRAEVARVLRVHETICPGGHRSGEVATPFE
Ga0066655_100356135	3300018431	Grasslands Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRARRAETARVLHVHESICPGGQRAGEIATPFE
Ga0066655_100767492	3300018431	Grasslands Soil	MRSLFRRARRRSLMPRLLAKRASRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE
Ga0066655_101434932	3300018431	Grasslands Soil	MSRLLTKRVSAPSVVGACGVCGIKFAASRGRQADTARVLCVHETICPGGERSGEVATPYE
Ga0066655_103956662	3300018431	Grasslands Soil	MLSLFGRARRRSLRSRLLTNRVARRSPSVVGACGVCGVTFAASRERQAEAARVLRVHESICPGGQRSGEVATPFE
Ga0066667_100149564	3300018433	Grasslands Soil	MPRLLARRVPHRAPSVIGACAVCGVKFAASREHRAEVARVLRVHETICPGGHRSGEVATPFE
Ga0066667_103678842	3300018433	Grasslands Soil	MPRLLAKRASRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE
Ga0066667_103840832	3300018433	Grasslands Soil	MLSLFGRARRRSLMPRLLTKRVPRRLPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE
Ga0066669_101671172	3300018482	Grasslands Soil	MLSLFGRARRRSLMPRLLTKRVPRRLPSVVGACGVCGVQFAASRERRAETAHVLHVHESICPGGQRAGEVATPFE
Ga0179594_100907582	3300020170	Vadose Zone Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVAMPFE
Ga0207646_100734454	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MLSLFRRARRRSLMPRLLAKRAPRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE
Ga0209235_12806611	3300026296	Grasslands Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE
Ga0209237_10991712	3300026297	Grasslands Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASGERRAEAARVLRVHESICPGGQRAGEVATPFE
Ga0209236_10316223	3300026298	Grasslands Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGTCGVCGVQFAASRERRAEATRVLRVHESICPGGQRAGEVATPFE
Ga0209469_10146925	3300026307	Soil	RSLMPRLLTKRVPRRLPSVVGACGVCGVQFAASRERRAETAHVLHVHESICPGGQRAGEVATPFE
Ga0209469_10199143	3300026307	Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGTCGVCGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE
Ga0209055_10951403	3300026309	Soil	WAGSRGIALAPSAGMRTIMRSLFRRARRRSLMPRLLAKRASRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE
Ga0209761_10876922	3300026313	Grasslands Soil	MLSLFGRARRRSLMPRVLTKRAPRRRPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE
Ga0209268_10229083	3300026314	Soil	MRSLFRRAQRRSLMPRLLAKRASRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVAMPFE
Ga0209155_10175691	3300026316	Soil	GSRGIALALDPRMRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRARRAETARVLHVHESICPGGQRAGEVATPFE
Ga0209472_10344233	3300026323	Soil	MKTNLLSLFGRARRRSLLSRLLTKRVSAPSVVGACGVCGIKFAASRGRQADTARVLCVHETICPGGERSGEVATPYE
Ga0209801_10159303	3300026326	Soil	MPRLLAKRASRRAPSVVGVCGVCGVKFAASRERQADAARVLRVHESICPGGQRSGRVATPFE
Ga0209801_11423331	3300026326	Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE
Ga0209266_12340701	3300026327	Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGTCGVCGVQFAASRERRAEAARVLRVHESICPGGQ
Ga0209377_10352581	3300026334	Soil	GRARRRSLMPRLLTKRVPRRLPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE
Ga0209377_10686753	3300026334	Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRA
Ga0209057_10426305	3300026342	Soil	MLSLFERARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRARRAETARVLHVHESICPGGQRAGEVATPFE
Ga0209690_11747732	3300026524	Soil	MLSLFGRARRRSVMPRLLTKRVPRRLPSVVGACGVCGVQFAASRERRAETAHVLHVHESICPGGQRAGEVATPFE
Ga0209378_10342155	3300026528	Soil	MPRLLTKRVPRRLPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE
Ga0209378_10554593	3300026528	Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE
Ga0209160_10484363	3300026532	Soil	MRTIMLSLLGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASGERRAEAARVLRVHESICPGGQRAGEVATPFE
Ga0209058_11365562	3300026536	Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRVEAARVLRVHESICPGGQRAGEVATPFE
Ga0209157_11496722	3300026537	Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRARRAETARVLHVHESICP
Ga0209157_13583071	3300026537	Soil	GRARRRSLRSRLLTNRVARRSPSVVGACGVCGVTFAASRERQAEAARVLRVHESICPGGQRSGEVATPFE
Ga0209474_102645793	3300026550	Soil	LFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETARVLHVHESICPGGQRAGEVATPFE
Ga0209474_102897092	3300026550	Soil	MSRLLTKRVSRRAPSVVGACGVCGIKFAASRGRQADTARVLCVHETICPGGERSGEVATPYE
Ga0209388_10030534	3300027655	Vadose Zone Soil	MLSLFGRARRRSLMPRLLTSRVPRRRPSVVGTCGVCGVQFAASRERRAEATRVLRVHESICPGGQRAGEVATPFE
Ga0209689_10351002	3300027748	Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASGERRAEAARVLRVHESICPGGQRAGEVATPFE
Ga0209180_104039732	3300027846	Vadose Zone Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGACGVQFAASRERRAEAARVLRVHESICPGGQRAGEVATPFE
Ga0209283_105493641	3300027875	Vadose Zone Soil	MLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRAETARVLRVHESICPGGQRAGEVATPFE
Ga0307469_122478811	3300031720	Hardwood Forest Soil	MLSLFGRARRRSLMPRLLTQRVPRRRPSVVGTCGVCGVQFAASRERRAEATRVLRVHESICPGGQRA
Ga0307475_102552412	3300031754	Hardwood Forest Soil	MLSLFGRARHRSLMPRLLTKRVPRRRPNVIGACAVCGITFAASRERQADATRVLRVHENICPGGQRAGEVATPFE
Ga0307473_100776041	3300031820	Hardwood Forest Soil	DPRMRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRADTARVLHVHESICPGGQRAGEVATPFE
Ga0307479_105519132	3300031962	Hardwood Forest Soil	MRTIMLSLFGRARRRSLMPRLLTKRVPRRRPSVVGACGVCGVQFAASRERRADTARVLYVHESICPGGQRAGEVATPFE
Ga0307471_1002186612	3300032180	Hardwood Forest Soil	MLSLFGRARRRSLMPRLLTQRVPRRRPSVVGTCGVCGVQFAASRERRAEATRVLRVHESICPGGQRAGEVATPFE
Ga0307471_1002647562	3300032180	Hardwood Forest Soil	MPRLLTKRVPRRASSVIGACAVCGVKFAASPERRADAARVLRVHESMCPGGRRARGVVIPFLYSSQRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052496

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences