Metagenome / Metatranscriptome Family F052479

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052479
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	78 residues
Representative Sequence	MLAEKAKLSLADIEAQAAFELPDREMMLITVVITNVLNNLSVDVDVKNNNVAVQVCAAVQALNTILAPTELTCVIQQ
Number of Associated Samples	79
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.01 %
% of genes near scaffold ends (potentially truncated)	23.24 %
% of genes from short scaffolds (< 2000 bps)	90.14 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.521 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.944 % of family members)
Environment Ontology (ENVO)	Unclassified (26.056 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.408 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.43% β-sheet: 0.00% Coil/Unstructured: 68.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00730	HhH-GPD	2.16
PF02163	Peptidase_M50	1.44
PF01638	HxlR	1.44
PF11303	DUF3105	1.44
PF13417	GST_N_3	0.72
PF13586	DDE_Tnp_1_2	0.72
PF01025	GrpE	0.72
PF00294	PfkB	0.72
PF13340	DUF4096	0.72
PF00196	GerE	0.72
PF08241	Methyltransf_11	0.72
PF03725	RNase_PH_C	0.72
PF06736	TMEM175	0.72
PF01182	Glucosamine_iso	0.72
PF01740	STAS	0.72
PF03167	UDG	0.72
PF02347	GDC-P	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	2.16
COG0177	Endonuclease III	Replication, recombination and repair [L]	2.16
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	2.16
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	2.16
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	2.16
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.44
COG0363	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	Carbohydrate transport and metabolism [G]	0.72
COG0403	Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain	Amino acid transport and metabolism [E]	0.72
COG0576	Molecular chaperone GrpE (heat shock protein HSP-70)	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	0.72
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.72
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.72
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	0.72
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.72
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	0.72
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.72
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.52 %
All Organisms	root	All Organisms	46.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.52 %
cellular organisms	root	All Organisms → cellular organisms	46.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	18.31 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	4.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.23 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.52 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16.20 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4.93 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.23 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.11 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.75 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	4.93 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	4.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.23 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.11 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.70 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.52 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.75 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	4.93 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	4.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.23 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.11 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.75 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4.93 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	4.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.23 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.11 %
Chloroflexia bacterium SDU3-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.75 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	4.93 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	4.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.23 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.11 %
Chloroflexia bacterium SDU3-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.75 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	4.93 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	4.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.23 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.11 %
Chloroflexia bacterium SDU3-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000750\|JGI12272J11983_1062675	Not Available	715	Open in IMG/M
3300000750\|JGI12272J11983_1062675	Not Available	715	Open in IMG/M
3300000827\|JGI12396J12026_1149741	Not Available	583	Open in IMG/M
3300000828\|JGI12467J12023_1123246	Not Available	616	Open in IMG/M
3300000831\|JGI12271J12027_1014651	Not Available	997	Open in IMG/M
3300000831\|JGI12271J12027_1014651	Not Available	997	Open in IMG/M
3300000831\|JGI12271J12027_1144638	Not Available	646	Open in IMG/M
3300000831\|JGI12271J12027_1144638	Not Available	646	Open in IMG/M
3300000833\|JGI12273J12029_10090526	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	670	Open in IMG/M
3300000833\|JGI12273J12029_10097499	Not Available	869	Open in IMG/M
3300000833\|JGI12273J12029_10184373	Not Available	593	Open in IMG/M
3300003162\|Ga0006778J45830_1059176	Not Available	523	Open in IMG/M
3300003579\|Ga0007429J51699_1025282	Not Available	632	Open in IMG/M
3300005045\|Ga0071328_104475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8680	Open in IMG/M
3300005332\|Ga0066388_102805654	Not Available	890	Open in IMG/M
3300005445\|Ga0070708_101396080	Not Available	653	Open in IMG/M
3300005467\|Ga0070706_101733962	Not Available	568	Open in IMG/M
3300005468\|Ga0070707_101339605	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005764\|Ga0066903_108099344	Not Available	538	Open in IMG/M
3300006032\|Ga0066696_10325882	Not Available	1000	Open in IMG/M
3300006800\|Ga0066660_11107672	Not Available	627	Open in IMG/M
3300006854\|Ga0075425_100065889	All Organisms → cellular organisms → Bacteria	4071	Open in IMG/M
3300006876\|Ga0079217_10100782	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300006876\|Ga0079217_10112634	Not Available	1247	Open in IMG/M
3300006880\|Ga0075429_100419143	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300006894\|Ga0079215_10701852	Not Available	684	Open in IMG/M
3300006894\|Ga0079215_11146746	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300006918\|Ga0079216_10068805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1607	Open in IMG/M
3300006918\|Ga0079216_10092536	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300006918\|Ga0079216_10175391	Not Available	1147	Open in IMG/M
3300006918\|Ga0079216_11027629	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300007004\|Ga0079218_10760302	Not Available	922	Open in IMG/M
3300007076\|Ga0075435_101945102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	516	Open in IMG/M
3300007790\|Ga0105679_10253884	Not Available	1111	Open in IMG/M
3300007790\|Ga0105679_10817265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1141	Open in IMG/M
3300009012\|Ga0066710_100748102	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300009012\|Ga0066710_101014732	Not Available	1281	Open in IMG/M
3300009094\|Ga0111539_13402200	Not Available	511	Open in IMG/M
3300009100\|Ga0075418_10224909	All Organisms → cellular organisms → Bacteria	1997	Open in IMG/M
3300009137\|Ga0066709_100054176	All Organisms → cellular organisms → Bacteria	4561	Open in IMG/M
3300009137\|Ga0066709_100396028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1914	Open in IMG/M
3300009137\|Ga0066709_103629581	Not Available	560	Open in IMG/M
3300009147\|Ga0114129_10822110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	1183	Open in IMG/M
3300009840\|Ga0126313_10554362	Not Available	923	Open in IMG/M
3300010039\|Ga0126309_10172739	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300010040\|Ga0126308_10249144	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300010137\|Ga0126323_1053701	Not Available	578	Open in IMG/M
3300010137\|Ga0126323_1078670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300010137\|Ga0126323_1149870	Not Available	586	Open in IMG/M
3300010145\|Ga0126321_1005192	Not Available	765	Open in IMG/M
3300010145\|Ga0126321_1171420	Not Available	524	Open in IMG/M
3300010145\|Ga0126321_1255305	Not Available	603	Open in IMG/M
3300010145\|Ga0126321_1259775	Not Available	527	Open in IMG/M
3300010145\|Ga0126321_1261636	Not Available	939	Open in IMG/M
3300010145\|Ga0126321_1361818	Not Available	649	Open in IMG/M
3300010145\|Ga0126321_1366203	Not Available	1050	Open in IMG/M
3300010145\|Ga0126321_1449192	Not Available	543	Open in IMG/M
3300010359\|Ga0126376_10526435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1101	Open in IMG/M
3300010366\|Ga0126379_10130009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2306	Open in IMG/M
3300010398\|Ga0126383_11007998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	921	Open in IMG/M
3300010398\|Ga0126383_12659810	Not Available	583	Open in IMG/M
3300010870\|Ga0102750_10430142	Not Available	527	Open in IMG/M
3300011332\|Ga0126317_10074661	Not Available	557	Open in IMG/M
3300011332\|Ga0126317_10099141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	915	Open in IMG/M
3300011332\|Ga0126317_10478173	Not Available	549	Open in IMG/M
3300011333\|Ga0127502_10091933	Not Available	517	Open in IMG/M
3300011333\|Ga0127502_11243322	Not Available	520	Open in IMG/M
3300011400\|Ga0137312_1011073	Not Available	1139	Open in IMG/M
3300012045\|Ga0136623_10025142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2555	Open in IMG/M
3300012093\|Ga0136632_10131778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1152	Open in IMG/M
3300012186\|Ga0136620_10027723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2689	Open in IMG/M
3300012208\|Ga0137376_10615626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300012212\|Ga0150985_106261548	Not Available	772	Open in IMG/M
3300012212\|Ga0150985_108092573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	841	Open in IMG/M
3300012212\|Ga0150985_108891541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1234	Open in IMG/M
3300012212\|Ga0150985_109161674	Not Available	625	Open in IMG/M
3300012212\|Ga0150985_109701442	Not Available	666	Open in IMG/M
3300012212\|Ga0150985_114999642	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1943	Open in IMG/M
3300012212\|Ga0150985_116526992	Not Available	628	Open in IMG/M
3300012212\|Ga0150985_118909823	Not Available	601	Open in IMG/M
3300012212\|Ga0150985_119719194	Not Available	533	Open in IMG/M
3300012212\|Ga0150985_122009814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300012397\|Ga0134056_1352022	Not Available	578	Open in IMG/M
3300012469\|Ga0150984_110543238	Not Available	519	Open in IMG/M
3300012469\|Ga0150984_110918459	Not Available	602	Open in IMG/M
3300012469\|Ga0150984_112363874	Not Available	605	Open in IMG/M
3300012469\|Ga0150984_114949517	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300012682\|Ga0136611_10079442	All Organisms → cellular organisms → Bacteria	2321	Open in IMG/M
3300017787\|Ga0183260_10002130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16436	Open in IMG/M
3300017789\|Ga0136617_10275372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1393	Open in IMG/M
3300018000\|Ga0184604_10226406	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300018027\|Ga0184605_10021456	All Organisms → cellular organisms → Bacteria	2594	Open in IMG/M
3300018061\|Ga0184619_10001248	All Organisms → cellular organisms → Bacteria	8943	Open in IMG/M
3300018422\|Ga0190265_10000340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36181	Open in IMG/M
3300018466\|Ga0190268_10325230	Not Available	940	Open in IMG/M
3300019279\|Ga0184642_1294280	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300019279\|Ga0184642_1532582	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	867	Open in IMG/M
3300019279\|Ga0184642_1573131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300019884\|Ga0193741_1004860	All Organisms → cellular organisms → Bacteria	3628	Open in IMG/M
3300019884\|Ga0193741_1129217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300020152\|Ga0196971_1093153	Not Available	626	Open in IMG/M
3300021412\|Ga0193736_1014106	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300025910\|Ga0207684_11308369	Not Available	597	Open in IMG/M
3300026550\|Ga0209474_10780641	Not Available	500	Open in IMG/M
3300027639\|Ga0209387_1027767	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1138	Open in IMG/M
3300027691\|Ga0209485_1193947	Not Available	630	Open in IMG/M
3300027691\|Ga0209485_1344312	Not Available	503	Open in IMG/M
3300027886\|Ga0209486_10396697	Not Available	836	Open in IMG/M
3300028554\|Ga0302047_10578195	Not Available	527	Open in IMG/M
3300028717\|Ga0307298_10110371	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	785	Open in IMG/M
3300028721\|Ga0307315_10091061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300028819\|Ga0307296_10040355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2463	Open in IMG/M
3300028828\|Ga0307312_10434945	Not Available	863	Open in IMG/M
3300030829\|Ga0308203_1049164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300030830\|Ga0308205_1015634	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	825	Open in IMG/M
3300030830\|Ga0308205_1040737	Not Available	595	Open in IMG/M
3300030830\|Ga0308205_1045777	Not Available	573	Open in IMG/M
3300030830\|Ga0308205_1058902	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	525	Open in IMG/M
3300030903\|Ga0308206_1021656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1092	Open in IMG/M
3300030903\|Ga0308206_1037349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	913	Open in IMG/M
3300030903\|Ga0308206_1044162	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	862	Open in IMG/M
3300030903\|Ga0308206_1069507	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	738	Open in IMG/M
3300030903\|Ga0308206_1187805	Not Available	517	Open in IMG/M
3300030905\|Ga0308200_1116469	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300031054\|Ga0102746_10899291	Not Available	565	Open in IMG/M
3300031054\|Ga0102746_10962819	Not Available	1554	Open in IMG/M
3300031058\|Ga0308189_10244358	Not Available	674	Open in IMG/M
3300031058\|Ga0308189_10261599	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300031058\|Ga0308189_10331403	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300031058\|Ga0308189_10521842	Not Available	514	Open in IMG/M
3300031091\|Ga0308201_10119783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300031091\|Ga0308201_10329902	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300031092\|Ga0308204_10029524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1205	Open in IMG/M
3300031092\|Ga0308204_10038539	Not Available	1104	Open in IMG/M
3300031092\|Ga0308204_10097729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	805	Open in IMG/M
3300031092\|Ga0308204_10106444	Not Available	781	Open in IMG/M
3300031092\|Ga0308204_10143964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300031092\|Ga0308204_10167588	Not Available	664	Open in IMG/M
3300031092\|Ga0308204_10243587	Not Available	580	Open in IMG/M
3300031092\|Ga0308204_10250726	Not Available	574	Open in IMG/M
3300032002\|Ga0307416_102853817	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.80%
Host-Associated	Host-Associated	16.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.38%
Aquatic	Environmental → Aquatic	20.42%
Plants	Host-Associated → Plants	16.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.38%
Freshwater	Environmental → Aquatic → Freshwater	17.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.75%
Sediment	Environmental → Aquatic → Sediment	2.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.30%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	11.27%
Sand	Environmental → Terrestrial → Soil → Sand	9.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.93%
Ice	Environmental → Aquatic → Freshwater → Ice	4.23%
Loam	Environmental → Terrestrial → Soil → Loam	4.23%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.11%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.99%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	11.27%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	9.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.93%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	4.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.41%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.94%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	11.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	9.15%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	7.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	7.75%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	4.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.82%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.11%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.11%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.11%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.41%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000750	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate A) D5A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000827	Soil microbial communities from Moab, Utah, sample - Soil Crust Prior wet up (biological replicate B) 0B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000828	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate C) D5C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000831	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate B) D5B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000833	Soil microbial communities from Moab, Utah, sample - Soil Crust Prior wet up (biological replicate C) 0C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003162	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003579	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010137	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010870	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012682	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ223 (23.06)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020152	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10-13C	Environmental	Open in IMG/M
3300021412	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028554	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (v9)	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031054	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 1C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12272J11983_10626751	3300000750	Soil	LEAQSAMELPAREMMLVTIVITNLLNNLSVDVDVKNNNVAVQVCAVVNALNAFIATQLTCDIQQ*
JGI12272J11983_10626752	3300000750	Soil	MLATKKALSITELEAQSAMELPAREMMLVTIVITNLLNNLSVDVDVKNNNVAVQVCAVVNALNAFIATQLTCDIQQ*
JGI12396J12026_11497412	3300000827	Soil	MDKRTLNIAEIEAQTAWELPDREMMLVTVVITNLLNNLSVEVDVRNNKVAVQVCAAVQALNAILVGQSLRCEIDQ*
JGI12467J12023_11232462	3300000828	Soil	MLATKKALSITELEAQSAMELPDREMMLVTVVITNVLNNLSVDVDVRNNNVAAQVCAAVQLINALLVGQSLTCTIEQG*
JGI12271J12027_10146512	3300000831	Soil	MLTNKRALSIDELESQTALELPDREMMLVTIVITNLLNNLSIDVDVKNNNVAVQVCAVVNALNAGIGTSLTCEIQQ*
JGI12271J12027_10146513	3300000831	Soil	MMIEKRALSIDELESQTALELPDREMMLVTIVITNLLNNLSIDVDVKNNNVAVQVCAVVNLLNTNIGT*
JGI12271J12027_11446381	3300000831	Soil	LMEKKALSIAELESQSAMELPDREMMLVTIVITNLLNNLSVDIDVKNNNVAVQVCAVVNALNVAIGTALTCAVKQ*
JGI12271J12027_11446382	3300000831	Soil	MLMEKKALSIAELESQSAMELPDREMMLVTIVITNLLNNLSVDIDVKNNNVAVQVCAVVNAINAGVGTELTCTIEQK*
JGI12273J12029_100905261	3300000833	Soil	MLMEKKALSIDELEAQSAMELPDREMMLVTVVITNLLNNLSVDIDVRNNNVAVQVCAVVQALNTILVGQELTCEIQQ*
JGI12273J12029_100974992	3300000833	Soil	MMIEKRALSIDELESQTALELPDREMMLVTIVITNLLNNLSIDVDVKNNNVAVQVCAVVNLLNTNIGTSLTCDIQQ*
JGI12273J12029_101843731	3300000833	Soil	KKALSITELEAQSAMELPAREMMLVTIVITNLLNNLSVDVDVKNNNVAVQVCAVVNALNAAIGTVLTCDIQQ*
Ga0006778J45830_10591761	3300003162	Avena Fatua Rhizosphere	MLAEKRKFSFADVEAQSAFELPDREMMLITVVINNVLNNLSVDVDVKNIKIAVEVCAAVNAINTILVGESLTCQIRH*
Ga0007429J51699_10252822	3300003579	Avena Fatua Rhizosphere	MLAEKRKFSFADVEAQSAFELPDREMMLITVVINNVLNNLSVDVDVKNIKIAVEVCAAVNAINTILVGESLTCRIQQ*
Ga0071328_1044754	3300005045	Permafrost	MLLEKQTLSLEELEDQAAFELPNRDMMLVTVIITNLLNNLSIDVDVKNNKVAVQVCAVVAVLGTILPGSSLDCDIVQ*
Ga0066388_1028056541	3300005332	Tropical Forest Soil	MLVEKQPLSLADIEAQTALELPDREMLALVTVIITNVLNNLSVNVEVKNNSVAVQVCAAVQLINTIISPTVLHCEIAQ*
Ga0070708_1013960801	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLAEKQRLGFADIEAQSAFELPDREMMLITVVITNVLNHLSVDVDVTNVKVAVQICAAVNAINTIIAPTNLTCKIGQ*
Ga0070706_1017339622	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLAEKRGLSFADIESQSAFELPDREMMLITVVITNVLNHLSVDVDVKSVSVAVQVCAAVNAINTILVGESLTCKIS*
Ga0070707_1013396052	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	RHTTPNNKRDHTMLAEKQRLGFADIEAQSAFELPDREMMLITVVITNVLNHLSVDVDVTNVKVAVQICAAVNAINTIIAPTNLTCKIGQ*
Ga0066903_1080993441	3300005764	Tropical Forest Soil	MLVEKQSLSLADIEAQTALELPDREMLALVTVIITNVLNNLSVNVEVKNNSVAVQVCAAVQLINTIISPTVLHCEIAQ*
Ga0066696_103258822	3300006032	Soil	MLLEKKRLTIEDLEAQAALELPERDMMALVTIVITNVLNNLSVDVDVKNNNVAVQVCAVVDLLNTAVGTNLTCSIQQ*
Ga0066660_111076722	3300006800	Soil	MVLEKITLSLDELEAQYAAELPEREMLGLITIIITNLLNNLSVNVQVKNVNVAVQVCAVINVLNQNIGTNLTCNIQQ*
Ga0075425_1000658893	3300006854	Populus Rhizosphere	MLAEKQRLSFADIEAQSAFELPDREMMLITVVITNVLNHLSVDVDVTNVKVAVQICAAVNAINTIIAPTNLTCKIGQ*
Ga0079217_101007822	3300006876	Agricultural Soil	MLAEKKMLDLDLIESQSAVELPDRTLPLVTIVIANVLNNLSVEIDVRNNNVAVQVCAAVNLINTILDGDRLTCTIQQQ*
Ga0079217_101126343	3300006876	Agricultural Soil	MLAEKKMLDLDVIETQSAVELPDRTLPLVTIVITNLLNNLSVDIDVRNVNVAVQVCAAVELISAELLTVDALECEIEQNQ*
Ga0075429_1004191431	3300006880	Populus Rhizosphere	SVADLEAQAAFELPNREMMLITVVITNVLNNLSVDVDVRNNNIAVQICAAVQALNTIIAPTVLTCEVGQ*
Ga0079215_107018522	3300006894	Agricultural Soil	MNALTSKRPLTADVVNAQSTFELPERRLLALVTVVITNLLNNLSIDVDVRNNNVAVQVCAVVQALNTILVGETLTCEIEQR*
Ga0079215_111467461	3300006894	Agricultural Soil	AEKKMLDLDVIETQSAVELPDRTLPLVTIVITNLLNNLSIDVDVRNNNVAVQVCAAVQALNAILVGQVLTCEIEQD*
Ga0079216_100688051	3300006918	Agricultural Soil	MMLAEKKMLDLDVIETQSAVELPDRTLPLVTIVITNLLNNLSVEIDVRNVNVAVQVCAAVELISNRILTVDTLTCDIQQ*
Ga0079216_100925362	3300006918	Agricultural Soil	MIKEKRNQVRLDKESKMLAEKKMLDLDLIESQSAVELPDRTLPLVTIVIANVLNNLSVEIDVRNNNVAVQVCAAVNLINTILDGDRLTCTIQQQ*
Ga0079216_101753913	3300006918	Agricultural Soil	MLAEKKMLDLDLIETQSAVELPDRTLPLVTIVITNVLNNLSVEVDVRNINVAVQVCAVVELLSNRILTADTLTCDIQQ*
Ga0079216_110276291	3300006918	Agricultural Soil	MLLEKQPLSSEELDAQAALELPSRDMMLVTVVINNVLNDLTIDVDVRNVNVAVQVCAVVNLLNTILDGDRLTCTINQ*
Ga0079218_107603022	3300007004	Agricultural Soil	NALTSKRPLTADVVNAQSTFELPERRLLALVTVVITNLLNNLSIDVDVRNNNVAVQVCAVVQALNTILVGETLTCEIEQR*
Ga0075435_1019451022	3300007076	Populus Rhizosphere	MVLEKRPLSMDELDAQTALELPERDMMALVTIVITNVLNNLSVDVDVKNNNVAVQVCAIVNVLNSTIGTNLTCAIQQ*
Ga0105679_102538842	3300007790	Soil	MQTQSVLSLDEIESQAAFELPARETMLVTVIITDVLNNLSVDVDVRNNNVAVQVCAAVSAIASLINQPLTCEVAQ*
Ga0105679_108172652	3300007790	Soil	MLLEKKALSLEEIEAQSALELPDREMMLVTIVITNLLNNLSVEVDVRNNNVAVQVCAVINALNANIGTDLTCDIQQ*
Ga0066710_1007481022	3300009012	Grasslands Soil	MRMALEKTALSIDELEAQYAAELPEREMLSLVTIIITNVLNNLSVDIQVKNNNVAVQVCAVINILNQNIGTNLTCDIRQ
Ga0066710_1010147322	3300009012	Grasslands Soil	MLLEKKRLTIEDLEAQAALELPERDMMALVTVVITNVLNNLSVDVDVKNNNVAVQVCAVVDLLNTAVGTNLTCSIQQ
Ga0111539_134022001	3300009094	Populus Rhizosphere	MLAEKKRLSAADMEAQAAFELPDRELMLITVVITNVLNNLSVNVEVKNNNIAVQVCAVVAALNTNVGTSLTCDIPQSQ*
Ga0075418_102249093	3300009100	Populus Rhizosphere	MLAEKKRLSVADLEAQAAFELPNREMMLITVVITNVLNNLSVDVDVRNNNIAVQVCAAVQALNTIIAPTVLTCEVGQ*
Ga0066709_1000541763	3300009137	Grasslands Soil	MALEKTALSIDELEAQYAAELPEREMLSLVTIIITNVLNNLSVDIQVKNNNVAVQVCAVINILNQNIGTNLTCDIRQ*
Ga0066709_1003960283	3300009137	Grasslands Soil	MLLEKKRLTIEDLEAQAALELPERDMMALVTVVITNVLNNLSVDVDVKNNNVAVQVCAVVDLLNTAVGTNLTCSIQQ*
Ga0066709_1036295811	3300009137	Grasslands Soil	MKRTLTLQDIEAQTVLELPNRQMLGLVTVVITNVLNGLHIDVDVRNNNVAVQVCAVVDVINTIISEQLTCAIQQ*
Ga0114129_108221102	3300009147	Populus Rhizosphere	MVTEKRALSIEELEAQTALELPDRELMLITVVITNVLNNLSVSVDVKNNNVAVQVCAAVNLINTIISEQLTCAIRQG*
Ga0126313_105543621	3300009840	Serpentine Soil	MQLEKKVLSLEEIEAQAALELPDREMMLVTVIINNVLNNLSIDVDVRNVNVAVQVCAVVNALNTILDGDRLTCTIEQ*
Ga0126309_101727392	3300010039	Serpentine Soil	MLLEKKALSLEEIEAQSALDLPDRQMMLVTVVINNVLNNLSIDVDVRNVNVAVQVCAVVNALNTILDGDRLTCTIEQ*
Ga0126308_102491442	3300010040	Serpentine Soil	MLAEKKKMSLADIEAQSAFELPDREMMLVTVVITNLLNNLSIDVDVVNNKVAVQICAVVQALNTILAPGEVLTCDIQQ*
Ga0126323_10537011	3300010137	Soil	MKRALTFNDIEAQNALELPNRDMTLVTIVITNLLNNLSVDVDVRNVNVAVQVCAVVQAINTILVPTVLTCDIQ*
Ga0126323_10786702	3300010137	Soil	SVADIEAQAAFELPDRETMLVTVIVTNVLNNLSVDVDVSNNKVAVQVCAVVQAINTIIAPTVLTCDIEQ*
Ga0126323_11498701	3300010137	Soil	MLAEKRKFSFADVEAQSAFELPDREMMLITVVITNVLNNLSVDVDVKNVSIAVQVCAAVNAINTILVSGESLTCQIRH*
Ga0126321_10051921	3300010145	Soil	MSKMVLSPEAIESQAILELPERKLPLVTIVITNLLNNLSVDIDVKNNNVAAQVCAVVQLLNAFVLTQLTCDIQQ*
Ga0126321_11714201	3300010145	Soil	MVAEKRALSIEELEAQTALELPDRELMLVTVVITNVLNNLSVDIDVRNINVALQVCAAVNAINTIIVPTVLTCDIQQ*
Ga0126321_12553051	3300010145	Soil	MVLEKTALSLDELEAQYAAELPEREMLGLITVIITNLLNNLHIDVDIKNVNVAVQVCAVVNLLNTILDGDRLTCVIQQG*
Ga0126321_12597751	3300010145	Soil	MVLEKKRISFDEIEAQSAFELPEREMLLITVVITNLLNNLSVDVDVKNNNIAVQVCAVVSALNGAVGTSLTCDIQQ*
Ga0126321_12616361	3300010145	Soil	MVHDKKRLSLDEIEAQTALELPDRELMLVTIVITNLLNNLSVDIDVKNNNVAVQVCAIVQILNANVGTLLTCDIRQG*
Ga0126321_13618181	3300010145	Soil	MLAEKKRLSVADMEAQAAFELPDREMMLVTIVITNVLNNLSVDVDVKNNNIAVQVCAVVQAINTNLFAAPTLTCEVAQ*
Ga0126321_13662031	3300010145	Soil	MLLEKKRLSLEEMESQTALELPDRELMLVTVVITNVLNNLSIDVDIRNVNVAVQVCAVVQAINTILVGQALTCTVEQ*
Ga0126321_14491921	3300010145	Soil	MLAEKKRLRVADIEAQAAFELPDREMMLVTVVITNLLNNLSVDVDVRNNNVAVQVCAVVQALNTLLAPASFLTCDIQQ*
Ga0126376_105264352	3300010359	Tropical Forest Soil	MLVEKQRLSFADIEAQSAFELPDREMMQITVVITNVLNHLSVDVDVTNVKVAVQVCAAVNAINTIIAPTNLTCKIGQ*
Ga0126379_101300092	3300010366	Tropical Forest Soil	MLVEKQPLSLADIEAQTALELPEREMLALVTVVITNVLNHLSVTIDVKNNNVAVQICAAVQLINTLIAPTTLICDIHEGYQEPSILLASR*
Ga0126383_110079981	3300010398	Tropical Forest Soil	VIIAHLSASKEYRMLVEKQPLSLADIEAQTALELSEREMLALVTVVITNVLNHLSVTIDVKNNNVAVQICAAVQLINTLIAPTTLICDIHEG*
Ga0126383_126598101	3300010398	Tropical Forest Soil	MLVEKQRLSFADIEAQSAFELPDREMMQITVVITNVLNHLSVDVDVTNVKVAVQVCAAVNAINTIISENLTCRIS*
Ga0102750_104301422	3300010870	Soil	MLAEKKKMSLADIEAQAAFELPDREMMLVTIVITNLLNNLSIDVDVVNNKVAVQVCAVVQALNTILVPGGTPILTCDIQQ*
Ga0126317_100746611	3300011332	Soil	MLAEKKMLNLDTIESQSAHTLPDRMMPLVTVVITNLLNGLHVDVDVKNNNIAVQVCAVVTAISTLVATPLSCDIKQ*
Ga0126317_100991411	3300011332	Soil	MLAEKQKISVADIEAQAAFELPDRETMLVTVIVTNVLNNLSVDVDVSNNKVAVQVCAVVQAINTIIAPTVLTCDIEQ*
Ga0126317_104781731	3300011332	Soil	MLAEKRKFSFADVEAQSAFELPDREMMLITVVITNVLNNLSVDVDVKNVSIAVQVCAAVNAINTVLVGESLTCQIRH*
Ga0127502_100919331	3300011333	Soil	MLAEKQRLSVADIEAQSAFELPDREMMLVTVVITNLLNNLSIDVDVVNNKVAVQVCAVVQALNTILAPDETLTCVIGQ*
Ga0127502_112433221	3300011333	Soil	MLAEKKRISVADMEAQAAFELPDREMMLVTIVVTNVLNNLSIDIPIKNNNVAVQVCAAVEVIDTDLLGDILTCDIQQ*
Ga0137312_10110731	3300011400	Soil	MLLEKQPLSSAELDAQAALELPNRDMMLVTVVINNVLNNLTVDVDVRNVNVAVQVCAVVNALNTILDGDRLTCTITQ*
Ga0136623_100251423	3300012045	Polar Desert Sand	MLLEKKAITSEEVEAQAAFELPNRDMMLVTIVLTNVLNNLSIDVDVKNNKVAVQVCAVVQALNAILTPGSTTLTCNIQQ*
Ga0136632_101317782	3300012093	Polar Desert Sand	MLAEKKALNLEELESQVALDLPDREMLLVTVVITNLLNNLSIDVDVRNNKVAVQVCAVVTALSSLVSTPLSCEIQQ*
Ga0136620_100277231	3300012186	Polar Desert Sand	TVSRLAHYRRQRCRQKGEPMLAEKKALNLEELESQVALDLPDREMLLVTVVITNLLNNLSIDVDVRNNKVAVQVCAVVTALSSLVSTPLSCEIQQ*
Ga0137376_106156261	3300012208	Vadose Zone Soil	MLLEKRRLTMEDLEAQTALELPERDMMALVTVVITNVLNNLSVDVDVKNNNVAVQVCAIVNLLNSTIGTNLTCTTQQ*
Ga0150985_1062615482	3300012212	Avena Fatua Rhizosphere	MKRTLTFDEIDAQTALELPNRDMTLVTIVITNLLNNLSVDVDVKNNNVAVQVCAVVAALYTAVGTNLTCDIQQ*
Ga0150985_1080925731	3300012212	Avena Fatua Rhizosphere	MLAEKKRLNVADIEAQAAFELPNREMMLITVVITNVLNNLSVDIPVQNNHVAVQVCAVVNAINTIIPPNQLTCAIGQ*
Ga0150985_1088915412	3300012212	Avena Fatua Rhizosphere	MLPEKKRLSAADIAAQAALELPDRQMMLVTIVVTNVLNNLSIDVDVKNNNVAVQVCAVVQALNTILLPGADLDCQVLQK*
Ga0150985_1091616741	3300012212	Avena Fatua Rhizosphere	MQLEKKRLSAADIAAQSALELPDRQMMLVTIVVTNLLNNLSIDVDVKNNSVAVQVCAVVQALNTILLPGAQLDCQVTQR*
Ga0150985_1097014421	3300012212	Avena Fatua Rhizosphere	MLVEKKRLNVADIEAQSAFELPDREMMLITVVITNILNNLSIDVDVKNNNIAVQVCAVVNLINTILVGESLTCTIRQ*
Ga0150985_1149996422	3300012212	Avena Fatua Rhizosphere	MLAEKTKLSLADIEAQSAFELPDREMMLVTIVITNLLNNLSVDVDVRNINVAVQVCAVVEALNTSVGTSLTCDLQ*
Ga0150985_1165269921	3300012212	Avena Fatua Rhizosphere	MLLEKKRIGLDEIEAQTALELPDREMMLVTVIINNVLNGLSVDVDVKNNNVAVQVCAVVELINTELFTVETLTCNIG
Ga0150985_1189098232	3300012212	Avena Fatua Rhizosphere	MLAEKAKLSLADIEAQAAFELPDREMMLITVVITNVLNNLSVDVDVKNNNVAVQVCAAVQALNTILAPTELTCVIQQ*
Ga0150985_1197191941	3300012212	Avena Fatua Rhizosphere	MLAEKRTLSIEELEAQTALELPDRELMLVTVVITNVLNNLSVDIDVKNNNVAVQVCAVVQALNTILVGQSLTCRIEQ*
Ga0150985_1220098142	3300012212	Avena Fatua Rhizosphere	SNKKRDHTMLAEKRKFSFADVEAQSAFELPDREMMLITVVINNVLNNLSVDVDVKNIKIAVEVCAAVNAINTILVGESLTCRIQQ*
Ga0134046_10436631	3300012386	Grasslands Soil	MLAEKRALSIEELEAQTALELPERELMLITVIIADVLNNLSISVDVKSNKVAVQVCAVVNAINTILVGQQLTCTIQQ*
Ga0134056_13520221	3300012397	Grasslands Soil	RRPLGGAGKGGYMLLEKKRLTMEDLEAQTALELPEREMMALVTVVITNVLNNLSVDVDVKNNNVAVQVCAIVNLLNSTIGTSLTCSIQQ*
Ga0150984_1105432381	3300012469	Avena Fatua Rhizosphere	MLAEKKRLNVADIEAQSAFELPDREMMLITVVITNVLNNLSVDVDVKNNNIAVQVCAVVNLINTILVGESLTCTIRQ*
Ga0150984_1109184592	3300012469	Avena Fatua Rhizosphere	MLAEKAKLSLADIEAQAAFELPDREMMLITVVITNVLNNLSIDVDVKNNNVAVQVCAVVQLINTNLFAAPTLTCEVQQ*
Ga0150984_1123638741	3300012469	Avena Fatua Rhizosphere	MKRTLTFDEIDAQTALELPNRDMTLVTIVITNLLNNLSVDVDVKNNNVAVQVCAVVAALNTAVGTNLTCDIQQ*
Ga0150984_1149495172	3300012469	Avena Fatua Rhizosphere	MLAEKKKLNVADIEAQAAFELPAREMMLVTVVITNVLNHLSVDVDVKNNNVALQVCAVVQAINTNLFPAPTLTCEIGQ*
Ga0136611_100794425	3300012682	Polar Desert Sand	MGMLMEKKALSIVELEAQSAMELPDREMMLVTIVITNVLNNVSIIDDITIDVKNNNVAVQVCAVVTALNAILVGGQSLTCVIGQKQ*
Ga0183260_1000213017	3300017787	Polar Desert Sand	MLAEKKALNLEELESQVALDLPDREMLLVTVVITNLLNNLSIDVDVRNNKVAVQVCAVVTALSSLVSTPLSCEIQQ
Ga0136617_102753722	3300017789	Polar Desert Sand	MLLEKRTLTLNDIEAETALVLPERNMMALVTVVITNVLNNLSIDVDVKNNNVAVQVCAVVLLLNTILAGGNELTCTIEQR
Ga0184604_102264061	3300018000	Groundwater Sediment	MLLEKERLTLDELEAQAALELPNRDMMLVTVIINNVLNGLHIDVDVRNVNVAVQVCAVVNLINTIIAPDAALTCTIQQ
Ga0184605_100214562	3300018027	Groundwater Sediment	MLLEKERLTLDELEAQAALELPNRDMMLVTVIINNVLNNLSIDVDVRNVNVAVQVCAVVNLINTIIAPDAALTCTIQQ
Ga0184619_100012481	3300018061	Groundwater Sediment	MLLEKERLTLDELEAQAALELPNRDMMLVTVIINNVLNNLSIDVDVRNVNVAVQVCAVVNLINTIIAPD
Ga0190265_1000034019	3300018422	Soil	MLLEKQTLSMEELEDQAALELPNRDMMLVTVVITNLLNNLSIDVDVRNNKVAVQVCAVVNVLNTILPTGNTLVCEIEQ
Ga0190268_103252301	3300018466	Soil	RLGVADIEAQSAFELPDREMMLVTVVIANALNDVIDVNVKNNNIALQTCAIVELINVKLLTADVLTCDIEQRQ
Ga0184642_12942801	3300019279	Groundwater Sediment	MLLEKERLTLDELEAQAALELPNRDMMLVTVVINNVLNNLSIDVDVRNVNVAVQVCAVVNLINTIIAPDAALTCTIQQ
Ga0184642_15325821	3300019279	Groundwater Sediment	MLAEKKKMSLADIEAQSAFELPDREMMLVTIVITNLLNNLSVDVDVKNVNVAVQVCAVVAALNTNIATSLTCDIQ
Ga0184642_15731311	3300019279	Groundwater Sediment	MLLEKKALSFEEIDAQMALELPAREMLLVTIVITNVLNGFTVDIPIKNNNVAVQVCAAVLALNTVFDQPTLTCEVLQ
Ga0193741_10048605	3300019884	Soil	MLAEKKMLDLDQIETQSAVELPDRTLPLVTIVITNLLNNLSVEVDVRNNNVAVQVCAVVEALNTSVGTSLTCDIQ
Ga0193741_11292171	3300019884	Soil	MLLEKQTLSLEELEDQVALELPSRDMMLVTIVITNLLNNLSVEIDVRNNKVAAQVCAVVTALNTAVGTSLTCDVAQ
Ga0196971_10931532	3300020152	Soil	MLAEKKLLDIETIEAQSAFELPDRVMPLVTVVITNVLNDLTVEVDVSNNRVAVQVCAAVLLLNTIIAPNQLECEIEQ
Ga0193736_10141061	3300021412	Soil	MLAEKKMLDFDVIETQSAVELPDRTLPLVTIVITNLLNNLSVEVDVRNNNVAVQVCAVVEALNTSVGTSLTCDIQ
Ga0207684_113083691	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLAEKRGLSFADIESQSAFELPDREMMLITVVITNVLNHLSVDVDVKSVSVAVQVCAAVNAINTILVGESLTCKIS
Ga0209474_107806411	3300026550	Soil	MLLEKKRLTIEDLEAQAALELPERDMMALVTIVITNVLNNLSVDVDVKNNNVAVQVCAVVDLLNTAVGTNLTCSIQQ
Ga0209387_10277671	3300027639	Agricultural Soil	MLAEKKMLDLDLIESQSAVELPDRTLPLVTIVIANVLNNLSVEIDVRNNNVAVQVCAAVNLINTILDGDRLTCTIQQQ
Ga0209485_11939471	3300027691	Agricultural Soil	MLAEKKMLDLDVIETQSAVELPDRTLPLVTIVITNLLNNLSVEIDVRNVNVAVQVCAAVELISNRILTVDTLTCDIQQ
Ga0209485_13443122	3300027691	Agricultural Soil	QRKKPIRDKESTMLAEKKMLDLDLIETQSAVELPDRTLPLVTIVITNVLNNLSVEVDVRNINVAVQVCAVVELLSNRILTADTLTCDIQQ
Ga0209486_103966971	3300027886	Agricultural Soil	MLAEKKMLDLDLIETQSAVELPDRTLPLVTIVITNVLNNLSVEVDVRNINVAVQVCAVVELLSNRILTADTLT
Ga0302047_105781952	3300028554	Soil	MLAEKKKMSLADIEAQAAFELPDREMMLVTIVITNLLNNLSIDVDVVNNKVAVQVCAVVQALNTILVPGGTPILTCDIQQ
Ga0307298_101103712	3300028717	Soil	MLLEKERLTLDELEAQAALELPNRDMMLVTVIINNVLNNLSIDVDVRNVNVAVQVCAVGNQINTIIAPDAALTCTIQQ
Ga0307315_100910611	3300028721	Soil	MLLEKKRLTLDELDAQTALELPEREMMALVTVVITNLLNNLSIDVDVKNNNVAVQVCAVVTALSSLVSTPLSCEIAQ
Ga0307296_100403552	3300028819	Soil	MLLEKERLTLDDLEAQAALELPNRDMMLVTVVINNVLNGLHIDVDVRNVNVAVQVCAVVNLINTIIAPDAALTCTIQQ
Ga0307312_104349452	3300028828	Soil	MLLEKERLTLDELEAQAALELPNRDMMLVTVIINNVLNNLSIDVDVRNVNVAVQVCAVVNLINTIIAPDAALS
Ga0308203_10491642	3300030829	Soil	LADIEAQSAFELPDREMMLVTIVITNLLNNLSVDVDVKNVNVAVQVCAVVAALNTNIATSLTCDIQ
Ga0308205_10156342	3300030830	Soil	MLAEKKKMSLADIEAQSAFELPDREMMLVTIVITNLLNGLSIDVDVKNNNVAVQVCAVVAALNTNIATSLTCDIQ
Ga0308205_10407371	3300030830	Soil	MVLEKKRISFDDIEAQSAFELPEREMMLVTVVITNLLNNLSIDVDVTNNKVAIQVCAIVSALNGILGAAATGANFLTCDIGQ
Ga0308205_10457772	3300030830	Soil	MVLEKTALSLDELEAQYAAELPEREMLGLITIIITNLLNNLSIDVDVKNVNVAVQVCAIVNVLNTILDGDRLTCVIQQG
Ga0308205_10589021	3300030830	Soil	PTSYGEGGNMLLEKKPISLEELEAQAALELPNRDMMLVTVIINNVLNNLSIDVDVRNVNVAVQVCAVVNAINTIIAPDASLTCTIQQ
Ga0308206_10216562	3300030903	Soil	MLLEKKRLTPEELDAQTALELPEREMMALVTIIITNLLNNLSIDVDVKNNNVAVQVCAVVTALSSLVNTPLDCSIQQK
Ga0308206_10373492	3300030903	Soil	RQSTGAALTALQRGEEMLLEKKRLTLDELDAQTALELPEREMMALVTIVITNLLNNLSIDVDVKNNNVAVQVCAVVTALSSLVSTPLTCEIQQR
Ga0308206_10441621	3300030903	Soil	TSYGEGGNMLLEKKPISLEELEAQAALELPNRDMMLVTVIINNVLNNLSIDVDVRNVNVAVQVCAVVNAINTIIAPDASLTCTIQQ
Ga0308206_10695071	3300030903	Soil	MLAEKKKMSLADIEAQAAFELPDREMMLVTVLITNVLNGLSIDVDVKNNNVAVQVCAVVQALNTILAPASLTCDIGQ
Ga0308206_11878051	3300030903	Soil	MVLEKKRISLDEIEAQSAFELPEREMLLVTIVITNLLNNLDVDVNVANNKVAVQVCAAVSAISALVAIPLSCEVQQ
Ga0308200_11164691	3300030905	Soil	VNYWREEKRMLLEKERLTLDELEAQAALELPNRDMMLVTVIINNVLNNLSIDVDVRNVNVAVQVCAVVNLINTIIAPDAALTCTIQQ
Ga0102746_108992912	3300031054	Soil	MLAEKKKMSLADIEAQAAFELPDREMMLVTILITNVLNGLHVNVDVKNNNVAVQVCAVVAALNTNIGTSLTCAIQQ
Ga0102746_109628192	3300031054	Soil	MVLEKKRLSLDQLEAQTALELPDRELMLVTVVITNLLNGLSVDVDVKNVNIAAQVCAVVNLLNTQIATSLTCDIQQ
Ga0308189_102443581	3300031058	Soil	MLPEKKRLSAADIAAQAALELPDRQMMLITIVVTNVLNNLSIDVDVKNNNVAVQVCAVVQALNTILLPGADLDCQVLQK
Ga0308189_102615991	3300031058	Soil	REEKRMLLEKEALTLDDLEAQAALELPSRDMMLITVVINNVLNNLSIDVDVRNNKVAVQVCAIVNLINTILDGDSLTCTIQQ
Ga0308189_103314031	3300031058	Soil	GRERMLLEKEALTLDELEAQSALELPNRDMMLVTVIINNVLNNLTVDVDVRNVNVAVQVCAVVNAINTIIAPDAALTCTIQQ
Ga0308189_105218421	3300031058	Soil	MLLEKKTLTLNDIEAETALVLPERNMMALITVVITNLLNNLSIDVDVRNINVAVQVCAVVEALNTILVGQTLDCTITQRQ
Ga0308201_101197831	3300031091	Soil	RQSTGAALTALQRGEEMLLEKKRLTLDELDAQTALELPEREMMALVTIVITNLLNNLSIDVDVKNNNVAVQVCAVVTALSSLVSTPLTCEIQQK
Ga0308201_103299021	3300031091	Soil	KEDAMVLEKTALSLDELEAQYAAELPEREMLGLITVIITNLLNNLHIDVDVKNVNVAVQVCAVVNLLNTILDGDRLTCVIQQG
Ga0308204_100295242	3300031092	Soil	MLAEKKKMSLADIEAQSAFELPDREMMLVTVVITNLLNGLSIDVDVKNNNVAVQVCAVVAALNTNIATSLTCDIQ
Ga0308204_100385391	3300031092	Soil	KGGNMLLEKKRLTPEELDAQTALELPEREMMALVTIIITNLLNNLSIDVDVKNNNVAVQVCAVVTALSSLVNTPLDCSIQQK
Ga0308204_100977292	3300031092	Soil	AQTALELPEREMMALVTIVITNLLNNLSIDVDVKNNNVAVQVCAVVTALSSLVSTPLTCEIQQK
Ga0308204_101064441	3300031092	Soil	MLSEKKRLSVADMEAQAAFELPDREMMLVTVIITNVLNNLSVDVDVTNNNVAVQVCAVVQVINTNLFDAPTLTCEVQPGGR
Ga0308204_101439642	3300031092	Soil	LTLDELDAQTALELPEREMMALVTVIITNLLNDLSIDVDVKNNNVAVQVCAVVTALSSLVSTPLSCEIQQ
Ga0308204_101675882	3300031092	Soil	MLAEKQRLCVADIEAQSAFELPDREMMLVTVVITNLLNNLSIDVDVKNNNVAVQVCAVVEALSTELLTVDSLSCEIRQ
Ga0308204_102435871	3300031092	Soil	MLLEKKTLTLSDIEAETALVLPERNMMALITVVITNLLNNLSIDVDVRNINVAVQVCAVVQLLNTILVGQQLTCDIQQ
Ga0308204_102507261	3300031092	Soil	MLAEKKKMSLADIKAQSAFELPDREMMLVTIVITNLLNNLHIDVDVKNNNVAVQVCAVVQALNTILAPASLTCDIEQ
Ga0307416_1028538172	3300032002	Rhizosphere	IVSTQSAFELPDRQLLALVTVVITNLLNNLSIDVDVRNNNVAVQVCAVVNAITANNLAVLSCEVKQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052479

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences