Metagenome / Metatranscriptome Family F052442

Basic Information
Family ID	F052442
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	73 residues
Representative Sequence	MARKSKTTEEPRIGRKDLQDPDRDVRGPRKGSVEREAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVPK
Number of Associated Samples	126
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.65 %
% of genes near scaffold ends (potentially truncated)	30.99 %
% of genes from short scaffolds (< 2000 bps)	84.51 %
Associated GOLD sequencing projects	121
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Most Common Taxonomy
Group	Bacteria (71.831 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.944 % of family members)
Environment Ontology (ENVO)	Unclassified (35.211 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (42.958 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 1.94% Coil/Unstructured: 98.06%
Feature Viewer

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Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF04972	BON	46.48
PF11752	DUF3309	7.04
PF00171	Aldedh	7.04
PF02776	TPP_enzyme_N	2.11
PF00210	Ferritin	1.41
PF02771	Acyl-CoA_dh_N	0.70
PF03631	Virul_fac_BrkB	0.70
PF14833	NAD_binding_11	0.70
PF12725	DUF3810	0.70
PF00578	AhpC-TSA	0.70
PF00909	Ammonium_transp	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	7.04
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	7.04
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	7.04
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.70
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.70
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.70

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.83 %
Unclassified	root	N/A	28.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.83 %
Unclassified	root	N/A	28.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.83 %
Unclassified	root	N/A	28.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	16.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.34 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	16.90 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	16.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	4.93 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4.93 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002122\|C687J26623_10002501	All Organisms → cellular organisms → Bacteria	4103	Open in IMG/M
3300003994\|Ga0055435_10096769	Not Available	776	Open in IMG/M
3300004009\|Ga0055437_10094329	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300004047\|Ga0055499_10092304	Not Available	549	Open in IMG/M
3300004058\|Ga0055498_10000514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2913	Open in IMG/M
3300004058\|Ga0055498_10051965	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	727	Open in IMG/M
3300004062\|Ga0055500_10002432	All Organisms → cellular organisms → Bacteria → Proteobacteria	2570	Open in IMG/M
3300004463\|Ga0063356_100110408	All Organisms → cellular organisms → Bacteria	3016	Open in IMG/M
3300004463\|Ga0063356_103856509	Not Available	646	Open in IMG/M
3300004479\|Ga0062595_100292568	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300005289\|Ga0065704_10605802	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005289\|Ga0065704_10744039	Not Available	544	Open in IMG/M
3300005295\|Ga0065707_10369196	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300005345\|Ga0070692_10872105	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005468\|Ga0070707_100198339	All Organisms → cellular organisms → Bacteria	1956	Open in IMG/M
3300005468\|Ga0070707_101881077	Not Available	566	Open in IMG/M
3300005546\|Ga0070696_100891919	Not Available	737	Open in IMG/M
3300005547\|Ga0070693_101115205	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005843\|Ga0068860_100526712	Not Available	1182	Open in IMG/M
3300006845\|Ga0075421_101888986	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300006880\|Ga0075429_101488156	Not Available	589	Open in IMG/M
3300007004\|Ga0079218_11968408	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	665	Open in IMG/M
3300009038\|Ga0099829_10010571	All Organisms → cellular organisms → Bacteria	5973	Open in IMG/M
3300009098\|Ga0105245_10630666	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300009147\|Ga0114129_10012422	All Organisms → cellular organisms → Bacteria → Proteobacteria	12123	Open in IMG/M
3300009157\|Ga0105092_10779799	Not Available	559	Open in IMG/M
3300009171\|Ga0105101_10335969	Not Available	732	Open in IMG/M
3300010147\|Ga0126319_1333020	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300010400\|Ga0134122_10983653	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	825	Open in IMG/M
3300011119\|Ga0105246_12505574	Not Available	508	Open in IMG/M
3300011395\|Ga0137315_1005680	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300011423\|Ga0137436_1075381	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300011429\|Ga0137455_1046280	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300012034\|Ga0137453_1106442	Not Available	554	Open in IMG/M
3300012203\|Ga0137399_10328782	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1267	Open in IMG/M
3300012225\|Ga0137434_1009675	Not Available	1087	Open in IMG/M
3300012360\|Ga0137375_10556329	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300012685\|Ga0137397_10306450	Not Available	1183	Open in IMG/M
3300012918\|Ga0137396_10495056	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300012930\|Ga0137407_10212301	All Organisms → cellular organisms → Bacteria	1741	Open in IMG/M
3300014321\|Ga0075353_1207479	Not Available	526	Open in IMG/M
3300014862\|Ga0180096_1025567	Not Available	588	Open in IMG/M
3300014877\|Ga0180074_1050346	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	884	Open in IMG/M
3300014881\|Ga0180094_1015935	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1433	Open in IMG/M
3300014884\|Ga0180104_1017793	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300014885\|Ga0180063_1019483	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300015170\|Ga0120098_1007034	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300017997\|Ga0184610_1014291	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2051	Open in IMG/M
3300018000\|Ga0184604_10005534	All Organisms → cellular organisms → Bacteria	2354	Open in IMG/M
3300018027\|Ga0184605_10046996	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300018031\|Ga0184634_10348040	Not Available	679	Open in IMG/M
3300018051\|Ga0184620_10235890	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300018052\|Ga0184638_1171073	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	776	Open in IMG/M
3300018059\|Ga0184615_10160025	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300018061\|Ga0184619_10051208	All Organisms → cellular organisms → Bacteria	1797	Open in IMG/M
3300018063\|Ga0184637_10451363	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	756	Open in IMG/M
3300018070\|Ga0184631_10081859	Not Available	1234	Open in IMG/M
3300018071\|Ga0184618_10022621	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2078	Open in IMG/M
3300018076\|Ga0184609_10494612	Not Available	558	Open in IMG/M
3300018077\|Ga0184633_10577317	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300018079\|Ga0184627_10135828	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300018079\|Ga0184627_10175348	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1135	Open in IMG/M
3300018079\|Ga0184627_10176643	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1131	Open in IMG/M
3300018084\|Ga0184629_10213860	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300018422\|Ga0190265_10005310	All Organisms → cellular organisms → Bacteria	9084	Open in IMG/M
3300018422\|Ga0190265_10016524	All Organisms → cellular organisms → Bacteria	5750	Open in IMG/M
3300018422\|Ga0190265_10248978	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1823	Open in IMG/M
3300018422\|Ga0190265_10655099	Not Available	1171	Open in IMG/M
3300018429\|Ga0190272_10458046	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300018920\|Ga0190273_11391604	Not Available	612	Open in IMG/M
3300019232\|Ga0180114_1119356	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300019255\|Ga0184643_1260475	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300019269\|Ga0184644_1700247	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300019279\|Ga0184642_1061163	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300019360\|Ga0187894_10180446	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300019458\|Ga0187892_10007895	All Organisms → cellular organisms → Bacteria	14894	Open in IMG/M
3300019458\|Ga0187892_10012368	All Organisms → cellular organisms → Bacteria	10165	Open in IMG/M
3300019458\|Ga0187892_10025236	All Organisms → cellular organisms → Bacteria	5249	Open in IMG/M
3300019487\|Ga0187893_10150237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1897	Open in IMG/M
3300019879\|Ga0193723_1025865	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1783	Open in IMG/M
3300019879\|Ga0193723_1146249	Not Available	637	Open in IMG/M
3300019881\|Ga0193707_1086944	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300019883\|Ga0193725_1024017	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1653	Open in IMG/M
3300019886\|Ga0193727_1048998	Not Available	1371	Open in IMG/M
3300020003\|Ga0193739_1074542	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	864	Open in IMG/M
3300020004\|Ga0193755_1040036	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300020006\|Ga0193735_1062309	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300020009\|Ga0193740_1023907	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300020022\|Ga0193733_1093722	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300020061\|Ga0193716_1110005	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300020063\|Ga0180118_1106322	Not Available	628	Open in IMG/M
3300020067\|Ga0180109_1224906	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	889	Open in IMG/M
3300020067\|Ga0180109_1288087	Not Available	518	Open in IMG/M
3300021051\|Ga0206224_1040657	Not Available	606	Open in IMG/M
3300021090\|Ga0210377_10014724	All Organisms → cellular organisms → Bacteria	5894	Open in IMG/M
3300021151\|Ga0179584_1502354	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1194	Open in IMG/M
3300021344\|Ga0193719_10367925	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300021418\|Ga0193695_1078440	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	716	Open in IMG/M
3300022534\|Ga0224452_1105303	Not Available	863	Open in IMG/M
3300022694\|Ga0222623_10075689	Not Available	1305	Open in IMG/M
3300025165\|Ga0209108_10125921	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300025324\|Ga0209640_10085795	All Organisms → cellular organisms → Bacteria	2719	Open in IMG/M
3300025324\|Ga0209640_10409305	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1118	Open in IMG/M
3300025885\|Ga0207653_10180121	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300025907\|Ga0207645_10113313	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1757	Open in IMG/M
3300025917\|Ga0207660_10107503	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2094	Open in IMG/M
3300025918\|Ga0207662_11140509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	554	Open in IMG/M
3300025922\|Ga0207646_10821732	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300025957\|Ga0210089_1021599	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300025962\|Ga0210070_1034491	Not Available	607	Open in IMG/M
3300025965\|Ga0210090_1006076	Not Available	1640	Open in IMG/M
3300026360\|Ga0257173_1029063	Not Available	727	Open in IMG/M
3300026371\|Ga0257179_1021482	Not Available	749	Open in IMG/M
3300026469\|Ga0257169_1012329	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300026535\|Ga0256867_10027940	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2374	Open in IMG/M
3300027388\|Ga0208995_1013353	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300027731\|Ga0209592_1197107	Not Available	710	Open in IMG/M
3300027815\|Ga0209726_10070194	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M
3300027862\|Ga0209701_10021343	All Organisms → cellular organisms → Bacteria	4223	Open in IMG/M
3300028381\|Ga0268264_10166483	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300028536\|Ga0137415_10542238	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300028715\|Ga0307313_10225417	Not Available	582	Open in IMG/M
3300028803\|Ga0307281_10003995	All Organisms → cellular organisms → Bacteria → Proteobacteria	4060	Open in IMG/M
3300028819\|Ga0307296_10581064	Not Available	613	Open in IMG/M
3300028828\|Ga0307312_11194021	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300030006\|Ga0299907_10804188	Not Available	708	Open in IMG/M
3300030619\|Ga0268386_10187902	Not Available	1554	Open in IMG/M
3300030619\|Ga0268386_10350632	Not Available	1052	Open in IMG/M
3300030829\|Ga0308203_1003776	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300030830\|Ga0308205_1002986	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300030993\|Ga0308190_1003378	All Organisms → cellular organisms → Bacteria → Proteobacteria	1887	Open in IMG/M
3300031091\|Ga0308201_10145038	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300031092\|Ga0308204_10049991	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300031114\|Ga0308187_10020023	All Organisms → cellular organisms → Bacteria → Proteobacteria	1554	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1002039	All Organisms → cellular organisms → Bacteria	3725	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10181283	Not Available	585	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1139587	Not Available	601	Open in IMG/M
3300031421\|Ga0308194_10151720	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300031720\|Ga0307469_10242438	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300031720\|Ga0307469_10744664	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	893	Open in IMG/M
3300033550\|Ga0247829_10412976	All Organisms → cellular organisms → Bacteria → Proteobacteria	1111	Open in IMG/M
3300034155\|Ga0370498_041847	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1007	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.55%
Host-Associated	Host-Associated	8.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.63%
Aquatic	Environmental → Aquatic	35.92%
Plants	Host-Associated → Plants	8.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.41%
Sediment	Environmental → Aquatic → Sediment	20.42%
Freshwater	Environmental → Aquatic → Freshwater	9.15%
Marine	Environmental → Aquatic → Marine	6.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.23%
Cave	Environmental → Terrestrial → Cave	3.52%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	20.42%
Loam	Environmental → Terrestrial → Soil → Loam	9.15%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.75%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.34%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	3.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.82%
Sand	Environmental → Terrestrial → Soil → Sand	2.11%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.41%
Fossil	Environmental → Terrestrial → Soil → Fossil	0.70%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	20.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.75%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	6.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.52%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	3.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.82%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.11%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.41%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.70%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.70%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	11.97%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.04%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	6.34%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.34%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	5.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.11%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.11%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	2.11%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	2.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.11%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.41%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.41%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.41%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.70%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.70%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.70%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.70%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	0.70%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002122	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_2	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004047	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011395	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT200_2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012225	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014862	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT293_16_1Da	Environmental	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015170	Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019232	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020009	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021051	Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos A1	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025957	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025962	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025965	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034155	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
C687J26623_100025012	3300002122	Soil	MTRKSKTTEEPRIGRKDLQDPDRDARSPRKGGGEPDADRSDRNAGAGRPMQLDEEGRSRPADSGSPRPTDDAPVAK*
Ga0055435_100967691	3300003994	Natural And Restored Wetlands	MPRKAKTAREPRIGRKDLQDPERSDRSADAGRPVQLDEEGRSRPTDSDSPRPADDASVAK
Ga0055437_100943293	3300004009	Natural And Restored Wetlands	EPRIGRKDLQDPERSDRSADAGRPVQLDEEGRSRPTDSDSPRPADDASVAK*
Ga0055499_100923042	3300004047	Natural And Restored Wetlands	MARRSKTSGEPRIGRKDLQDPDRDVRSPRKGTVEPEADRSDREAGAGRPVQLDEEGRSRALGADSPRPV
Ga0055498_100005142	3300004058	Natural And Restored Wetlands	MARRSKTSGEPRIGRKDLQDPDRDVRSPRKGTVEPEADRSDREAGAGRPVQLDEEGRSRPLGADSPRPVDDAPVPK*
Ga0055498_100519651	3300004058	Natural And Restored Wetlands	MTRKAKTAREPRIGRKDLQDPDHDVRNSPQGGKERDPERSDRSASAGRPVQLDEEGRSRPTDSDS
Ga0055500_100024325	3300004062	Natural And Restored Wetlands	MTRKAKTAREPRIGRKDLQDPDHDVRNSPQGGKERDPERSDRSASAGRPVQLDEEGRSRPTDSDSARPPDDASGAK*
Ga0063356_1001104084	3300004463	Arabidopsis Thaliana Rhizosphere	MARKKTAEEPRIGRKDLQDPDRDVRSPRKGTIERDAERSDRDAGAGRPVQLDEEGPSRPADSDSPRPADDRSVPK*
Ga0063356_1038565092	3300004463	Arabidopsis Thaliana Rhizosphere	MGRKSKTTGEPRIGRKDLQDPDRDVSSPRKGNAEPDGERSDRDAGAGRPVQLDEEGRSRPTDDTPVAK*
Ga0062595_1002925681	3300004479	Soil	MARKPKTTDEPRIGRKDLQDPDRDVRKGSVERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK*
Ga0065704_106058021	3300005289	Switchgrass Rhizosphere	MTRKSKTTGEPRIGRKDLQDPDRDVRSPRKGNVEPEGERSDRDAGAGRPVQLDEEGRSRPTDDAPVAK*
Ga0065704_107440391	3300005289	Switchgrass Rhizosphere	MARKSKTTEEPRIGRKDLQDPDRDARGPRKGSVEREAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPAD
Ga0065707_103691962	3300005295	Switchgrass Rhizosphere	MARKPKTTEEPRIGPRIGRKDLQDPDRDARKDSGEGDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPTDDAVVPK*
Ga0070692_108721052	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MARRPKTTDEPRIGRKDLQDPDRDVRKGSVERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK*
Ga0070707_1001983394	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTRKTKATAEPRIGRKDLQDPDRDVRSPREGSVERDAERSDRDAGAGRPVQLDEEGHSRPTASDSPRPADDASVPK*
Ga0070707_1018810772	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MARKSKTTEEPRIGRKDLQDPDRDVRGPRKGSVEREAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVPK*
Ga0070696_1008919191	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MARKSKTTGEPRIGRKDLQDPDRDVRSPRKGNVEPDGERSDRDAGAGRPVQLDEEGRSRPTDDAPVAK*
Ga0070693_1011152051	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	HSMARRPKTTDEPRIGRKDLQDPDRDVRKGSVERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK*
Ga0068860_1005267121	3300005843	Switchgrass Rhizosphere	MARKPKTTDEPRIGRKDLQDPDRDVRKGSVGRDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK*
Ga0075421_1018889861	3300006845	Populus Rhizosphere	MARKSKTTEEPRVGRKDLQDPDRDVRGPRKGTIERDAERSDREAGAGRPVQLDEEGPSHPADSDSPRPADDRSVPK*
Ga0075429_1014881561	3300006880	Populus Rhizosphere	MTRKSKTTGEPRIGRKDLQDPDRDVRNPRKGDVEREPERSDREAGAGRPVQLDEEGRSRPAGADSPRPADDGPVAK*
Ga0079218_119684082	3300007004	Agricultural Soil	MARQSKTSGEPRIGRKDLQDPDRDVRSPRKGTVEPDAERSDREAGAGRPVQLDEEGRSRPADDAPVAK*
Ga0099829_100105716	3300009038	Vadose Zone Soil	MTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPTDGAPVAK*
Ga0105245_106306663	3300009098	Miscanthus Rhizosphere	VTTAKPAEKHIETGGHSMARKPKTTDEPRIGRKDLQDPDRDVRKGSVERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK*
Ga0114129_100124222	3300009147	Populus Rhizosphere	MGRKSKTTEEPRIGRKDLQDPDRDARGPRKGSVEREAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVPK*
Ga0105092_107797992	3300009157	Freshwater Sediment	MARQLKTGGAPRIGRKDLQDPDRDVRSPRKGTVEPDAERSDREAGAGRPVQLDEEGRSRPTDDGPVAK*
Ga0105101_103359692	3300009171	Freshwater Sediment	MTRKSKTTGEPRIGRKDLQDPDRDVRSPRKGNVEPDGKRSDRDAGAGRPVQLDEEGRSRPTDDTPVAK*
Ga0126319_13330201	3300010147	Soil	QPRSISKQEVIHMARKPKTTGEPRIGRKDLQDPDRDVRKGSVERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPTDDAVVPK*
Ga0134122_109836532	3300010400	Terrestrial Soil	MARKAKTTEEPRIGRKDLQDPDRDVRSPRKGTIERDAERSDRDAGAGRPVQLDEEGPSRPTDSDSPRPADDRSVPK*
Ga0105246_125055741	3300011119	Miscanthus Rhizosphere	MARRPKTTDEPRIGRKDLQDPDRDVRKASVERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK*
Ga0137315_10056801	3300011395	Soil	MTRKSKTSEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLYEDEEGRSRPTDGAPVAK*
Ga0137436_10753812	3300011423	Soil	GQLMTRASKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGQPVQLDEDEEGRSRPTDGAPVAN*
Ga0137455_10462801	3300011429	Soil	MTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPADGAPVAK*
Ga0137453_11064421	3300012034	Soil	MTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGNVEPDGERSDRDAGAGRPVQLDEEGRSRPSDDASVAK*
Ga0137399_103287822	3300012203	Vadose Zone Soil	MGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGSVESETERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK*
Ga0137434_10096752	3300012225	Soil	MQSRSAQEDTMTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDHDAGAGRPVQLDEDEEGRSRPADGAPVAN*
Ga0137375_105563292	3300012360	Vadose Zone Soil	MARKSKTTVEPRIGRKDLQDPDRDTRGPRKGSVESEPERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK*
Ga0137397_103064502	3300012685	Vadose Zone Soil	MARKPKTTGEPRIGRKDLQDPDRDVRKGSVERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPTDDAVVPK*
Ga0137396_104950562	3300012918	Vadose Zone Soil	MGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGSVESEAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK*
Ga0137407_102123013	3300012930	Vadose Zone Soil	MARKSKTTEEPRIGRKDLQDPDRDARGPRKGSVEREAERSDREAGAGLDEEGRSRPAGSDSPRPADDAVVPK*
Ga0075353_12074791	3300014321	Natural And Restored Wetlands	RKAKTAREPRIGRKDLQDPDHDVRNSPQGGKERDPERSDRSASAGRPVQLDEEGRSRPTDSDSARPLDDASGAK*
Ga0180096_10255671	3300014862	Soil	KHEAHRRTFMARKSKTTEEPRIGRKDLQDPDRDVRSPRKGNVEPDGERSDRDAGAGRPVQLDEEGRSRPTDDAPVAK*
Ga0180074_10503462	3300014877	Soil	MTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDREAGAGRPVQLDDDEEGRSRPADNAPVAK*
Ga0180094_10159352	3300014881	Soil	MTRKSKTSEEPRIGRKDLQDPDRDVRTPRKGSVERDAERSDRDAGAGRPVQLDEEGQSRTSDSDSPRPADDAPVAK*
Ga0180104_10177932	3300014884	Soil	MTRKSKTSEEPRIGRKDLQDPDRDVRTPRKGSVERDAERSDRDAGAGRPVQLDEEGQSRTSDSDSPRPVDDAPVAK*
Ga0180063_10194835	3300014885	Soil	MTRKSKTTGQPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPADGAPVAK*
Ga0120098_10070341	3300015170	Fossill	GQLMARKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVERDAERSDREAGAGRPVQLDEEGHSRPADSDSPRPADDASVPK*
Ga0184610_10142913	3300017997	Groundwater Sediment	MTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPTDGAPVAK
Ga0184604_100055342	3300018000	Groundwater Sediment	MGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGNVESEPERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0184605_100469962	3300018027	Groundwater Sediment	MGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGSVESEPERSDRDAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0184634_103480402	3300018031	Groundwater Sediment	MTRKSKTSEEPRIGRKDLQDPDRDVRTPRKGSVERDAERSDRDAGAGRPVQLDEEGQSRPSDSDSPRPADDAPVAK
Ga0184620_102358901	3300018051	Groundwater Sediment	IGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0184638_11710732	3300018052	Groundwater Sediment	MTRKPKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPTDGAPVAK
Ga0184615_101600252	3300018059	Groundwater Sediment	MARKSKTTAEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLAEDEEGRSRPADDARVAK
Ga0184619_100512081	3300018061	Groundwater Sediment	RKDLQDPDRDTRGPRKGSVESEPERSDRDAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0184637_104513631	3300018063	Groundwater Sediment	MTRKSKTKKEPRIGRKDLQDPDRDVPSPRKGRVEEPDAERSDRSAGAGRPVQLDEEGRSRPADSDSPRPTHD
Ga0184631_100818591	3300018070	Groundwater Sediment	MTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPADGAPVAK
Ga0184618_100226214	3300018071	Groundwater Sediment	MGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGSLESEAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0184609_104946122	3300018076	Groundwater Sediment	MGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGNVESEPERSDRDAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0184633_105773172	3300018077	Groundwater Sediment	MTRKSKTTEELRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPTDGAPVAK
Ga0184627_101358281	3300018079	Groundwater Sediment	MTRKSKTSKEPRIGRKDLQDPDRDVRTPRKGSGERDAERSDRDAGAGRPVQLDEEGQSRTSDSDSPRPADDAPVAK
Ga0184627_101753482	3300018079	Groundwater Sediment	MTRKSKTKKEPRIGRKDLQDPDRDVPSPRKGRVEEPDAERSDRSAGAGRPVQLDEEGRSRPADSDSPRPTHDAPVAK
Ga0184627_101766431	3300018079	Groundwater Sediment	MTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPTDGAPV
Ga0184629_102138601	3300018084	Groundwater Sediment	TEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPADGAPVAK
Ga0190265_100053106	3300018422	Soil	MPRKSKTTEEPRIGRKDLQDPDRDVRSPRKGNVERDGERSDRDAGAGRPVQLDEEGRSRPADSDSPRPADDTSVPK
Ga0190265_100165242	3300018422	Soil	MARKAKTTEVPRIGRKDLQDPDRDVRGPRKGSIESDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0190265_102489783	3300018422	Soil	MTRKSKTTGQPRIGRKDLQDPDRDVRSQRKGAVEPDAERSDRSAGAGRPVQLDEEGRSRPADSDSPRPADDPPVAK
Ga0190265_106550992	3300018422	Soil	MARQSKTSGEPRIGRKDLQDPDRDVRSPRKGTVEPDAERSDREADAGRPVQLDEEGRSRPADDAPVAK
Ga0190272_104580463	3300018429	Soil	MTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGNVEPDGERSDRDAGAGRPVQLDEEGRSRPTDDAPVAK
Ga0190273_113916042	3300018920	Soil	RKSKTTEEPRIGRKDLQDPDRDTRGPRKGSVESEAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0180114_11193561	3300019232	Groundwater Sediment	MTRKSKTTEEPRIGRKDLQDPDRDVRNPRKGNVEPDGERSDRDAGAGRPVQLDEEGRSRPSDDASVAK
Ga0184643_12604753	3300019255	Groundwater Sediment	MGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGSVESEAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK
Ga0184644_17002471	3300019269	Groundwater Sediment	KHEAHRGTVMGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGSVESEPERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0184642_10611631	3300019279	Groundwater Sediment	MGRKSKTTEEPRIGRKDLQDPDRDTRGSRKGNVESEPERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0187894_101804462	3300019360	Microbial Mat On Rocks	MARKSKTTEEPRIGRKDLQDPDRDVRSPRKSTIERDAERTGRDAGAGRPVQLDEEGPSRPADSDSPRPADDRSVPK
Ga0187892_1000789521	3300019458	Bio-Ooze	MKRAPTGKAGPRIGRKDLQDPDRETRSPRQGRPEREPERSDPDAGVGRPVQLDEEGRVGADDPPVAK
Ga0187892_1001236810	3300019458	Bio-Ooze	MARKSKTTEEPRIGRKDLQDPDRDVRSPRKGTIERDAERSDRDAGAGRPVQLDEEGPSRPADSDSPRPADDRSVPK
Ga0187892_100252362	3300019458	Bio-Ooze	MTRKSKTTEEPRRSPRKGSTEPDAERSDRNAGAGRPVQLDEEGRSRAADSDSPRPADDGPVPK
Ga0187893_101502371	3300019487	Microbial Mat On Rocks	MARKSKTTEEPRIGRKDLQDPDRDVRSPRKSTIERDAERSDRDAGAGRPVQLDEEGPSRPADSDSPRPADDRSVPK
Ga0193723_10258653	3300019879	Soil	MARKPKTTEEPRIGPRIGRKDLQDPDRDARKDSGERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPTDDAVVPK
Ga0193723_11462492	3300019879	Soil	MGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGNVESEPERSDREAGAGRPVQMDEEGRSRPAGSDSPRPADDAAVPK
Ga0193707_10869442	3300019881	Soil	MARKSKTTEEPRIGRKDLQDPDRDTRGPRKGSAESEAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK
Ga0193725_10240173	3300019883	Soil	MARKSKTTEEPRIGRKDLQDPDRDTRGPRKGSVESEAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0193727_10489982	3300019886	Soil	MASRMASRGVAKTTEEPRIGRKDLQDPDRDARGPRKGSVEREAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK
Ga0193739_10745422	3300020003	Soil	MTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGQPVQLDEDEEGRSRPTDGAPVVK
Ga0193755_10400363	3300020004	Soil	MARKPKTTEEPRIGPRIGRKDLQDPDRDARKDSGERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK
Ga0193735_10623093	3300020006	Soil	IGRKDLQDPDRDARGPRKGSVEREAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK
Ga0193740_10239071	3300020009	Soil	MTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPTDGAPVVK
Ga0193733_10937222	3300020022	Soil	SKTTEEPRIGRKDLQDPDRDTRGPRKGNVESEPERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0193716_11100052	3300020061	Soil	MSRKSKTTEEPRIGRKDLQDPDRDVRSPRKGTVDPDGERSDRDAGARRPVQLDEEGRSRPNDDAPVAK
Ga0180118_11063221	3300020063	Groundwater Sediment	EGHRGTLMTRKSKTTGQPRIGRKDLQDPDRDVRSPREGSVQPDAERSDRNAGAGRPVQLDEEGRSRPSESDSPRPADDAPVAK
Ga0180109_12249061	3300020067	Groundwater Sediment	MTRKSKTTEGPRIGRKDLQDPDRDVRSPRKGSVENDAERSDRDAGAGQPVQLDEDEGGRSRPADGAPVAK
Ga0180109_12880871	3300020067	Groundwater Sediment	EQSRTAQEAIMARQSKPSEEPRIGRKDLQDPDRDVRSPRKGVVEPDAERSDREAGAGRPVQLDEEGRSRPADDAPVAK
Ga0206224_10406572	3300021051	Deep Subsurface Sediment	MARKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPADGAPVAK
Ga0210377_100147243	3300021090	Groundwater Sediment	MARKSKTTAEPRIGRKDLQDPDRDVRSPRTGGVESDAERSDREAGAGRPVQLAEDEEGRSRPADDARVAK
Ga0179584_15023543	3300021151	Vadose Zone Soil	MARKPKTTGEPRIGRKDLQDPDRDVRKGSVERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPTDDAVVPK
Ga0193719_103679252	3300021344	Soil	MARKPKTTEEPRIGPRIGRKDLQDPDRDARKDSGEGDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPTDDAVVPK
Ga0193695_10784402	3300021418	Soil	LLPPLASRSVAKHEAHRGTVMARKSKTTEEPRIGRKDLQDPDRDARGPRKGSVEREAERSDREAGAGRPVQLDEEGRSRPA
Ga0224452_11053032	3300022534	Groundwater Sediment	MTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGQPVQLDEDEEGRSRPTDGAPAAK
Ga0222623_100756894	3300022694	Groundwater Sediment	TEELRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGQPVQLDEDEEGRSRPADGAPAAK
Ga0209108_101259212	3300025165	Soil	MTRKSKTTGEPRIGRKDLQDPDRDLRSPRKGDVEREAERSDREAGAGRPVQLDEEGRARPADSDSPRPGNDAPVAK
Ga0209640_100857955	3300025324	Soil	MTRKSKTTEEPRIGRKDLQDPDRDARSPRKGGGEPDADRSDRNAGAGRPVQLDEEGRSRPAASDSPRPTDDVPVAK
Ga0209640_104093052	3300025324	Soil	MARKSKSIEEPRIGRKDLQDPDRDVRSPRKGRVEPDAERSDRDAGAGRPVQRDEDEDGRSRPADDAPVPK
Ga0207653_101801212	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MARKPKTTDEPRIGRKDLQDPDRDVRKGSVERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK
Ga0207645_101133132	3300025907	Miscanthus Rhizosphere	MARKPKTTDEPRIGRKDLQDPDRDVRKGTVERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK
Ga0207660_101075033	3300025917	Corn Rhizosphere	MARKKTAEEPRIGRKDLQDPDRDVRSPRKGTIERDAERSDRDAGAGRPVQLDEEGPSRPADSDSPRPADDRSVPK
Ga0207662_111405091	3300025918	Switchgrass Rhizosphere	MARKPKTTDEPRIGRKDLQDPDRDVRKGSVERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRP
Ga0207646_108217322	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MARKSKTTEEPRIGRKDLQDPDRDVRGPRKGSVEREAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVPK
Ga0210089_10215992	3300025957	Natural And Restored Wetlands	MARRSKTSGEPRIGRKDLQDPDRDVRSPRKGTVEPEADRSDREAGAGRPVQLDEEGRSRPLGADSPRPVDDAPVPK
Ga0210070_10344911	3300025962	Natural And Restored Wetlands	MARRSKTSGEPRIGRKDLQDPDRDVRSPRKGTVEPEADRSDREAGAGRPVQLDEEGRSRPLGADSPRP
Ga0210090_10060762	3300025965	Natural And Restored Wetlands	MTRKAKTAREPRIGRKDLQDPDHDVRNSPQGGKERDPERSDRSASAGRPVQLDEEGRSRPTDSDSARPPDDASGAK
Ga0257173_10290632	3300026360	Soil	MTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAEHSDRDAGAGRPVQLDEDEEGRSRPTDGAPVAK
Ga0257179_10214821	3300026371	Soil	MTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPTDGAPVA
Ga0257169_10123291	3300026469	Soil	MTRKSKTTEEPRIGRKNLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPTDGAPVAK
Ga0256867_100279408	3300026535	Soil	MSRKSKTTEEPRIGRKDLQDPDRDVRGPRKGSVDRDAERSDRDAGAGRPVQLDEEGRSRPTDSDSPRPADDAPVPK
Ga0208995_10133531	3300027388	Forest Soil	DEAHRGRVMGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGSVESETERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK
Ga0209592_11971071	3300027731	Freshwater Sediment	MTRKSKTTGEPRIGRKDLQDPDRDVRSPRKGNVEPDGKRSDRDAGAGRPVQLDEEGRSRPTDDTPVAK
Ga0209726_100701942	3300027815	Groundwater	MTRKSKTIEEPRIGRKDLQDPDRAVRSPRKGGVDSDAERSDRDAGAGRTVQLDEDEEGRSRPADGAPVAK
Ga0209701_100213434	3300027862	Vadose Zone Soil	MTQKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPTDGAPVAK
Ga0268264_101664835	3300028381	Switchgrass Rhizosphere	MARKPKTTDEPRIGRKDLQDPDRDVRKGSVGRDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK
Ga0137415_105422382	3300028536	Vadose Zone Soil	MGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGSVESEAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0307313_102254171	3300028715	Soil	MGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGSVESEPERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAA
Ga0307281_100039954	3300028803	Soil	MTRKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQPDEDEEGRSRPADGAPVAK
Ga0307296_105810641	3300028819	Soil	MGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGNVESEPERSDREAGAGRPVQLDEEGRSRPAG
Ga0307312_111940212	3300028828	Soil	QLMARKSKTTEEPRIGRKDLQDPDRDVRSPRKGSVESDAERSDRDAGAGRPVQLDEDEEGRSRPTDGAPVAK
Ga0299907_108041882	3300030006	Soil	EPRIGRKDLQDPDRDVRGPRKGSVDRDAERSDRDAGAGRPVQLDEEGRSRPTDSDSPRPADDAPVPK
Ga0268386_101879022	3300030619	Soil	MSRKSKTTEEPRIGRKDLQDPDRDVRGPRKGSVDRDAERSDRDAGAGRPVQLDEEGRSRPTDSDSPRPADDPPVPK
Ga0268386_103506322	3300030619	Soil	MPRKSKTTEEPRIGRKDLQDPDRDVRGPRKGSVDRDAERSDRDAGAGRPVQLDEEGRSRPTDSDSPRPADDAPVPK
Ga0308203_10037761	3300030829	Soil	HEAHRGTVMGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGNVESEPERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0308205_10029861	3300030830	Soil	RKHEAHRGTVMGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGSVESEPERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0308190_10033781	3300030993	Soil	HEAHRGTVMGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGSVESEPERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0308201_101450381	3300031091	Soil	RKSKTTEEPRIGRKDLQDPDRDTRGPRKGNVESEPERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0308204_100499911	3300031092	Soil	TVMGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGNVESEPERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0308187_100200231	3300031114	Soil	KPEAHRGTVMGRKSKTTEEPRIGRKDLQDPDRDTRGPRKGSVESEPERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
(restricted) Ga0255311_10020398	3300031150	Sandy Soil	MARKTKTTEEPRIGRKDLQDPDRDARGSRKGSVERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK
(restricted) Ga0255310_101812831	3300031197	Sandy Soil	MTRKSKTIEEPRIGRKDLQDPDRDVRSPRKGGVDSDAERSDRDAGAGRPVQLDEDEEGRSRPADGAPVAK
(restricted) Ga0255312_11395871	3300031248	Sandy Soil	MTRKSKTTEQPRIGRKDLQDPDRDARSPRKGGGEPDAERSDRNAGAGRPVQLDEEGRSRPADSDSPRPTDDAPVAK
Ga0308194_101517202	3300031421	Soil	MARKSKTTEEPRIGRKDLQDPDRDTRGPRKGNVESEPERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAAVPK
Ga0307469_102424382	3300031720	Hardwood Forest Soil	MARKSKTTEEPRIGRKDLQDPDRDVRSPRKGTIERDAERSDRDAGAGRPVQLDEEGPSRPTDSDSPRPADDRSVPK
Ga0307469_107446642	3300031720	Hardwood Forest Soil	MARQSKTSGEPRIGRKDLQDPDRDVRSPRKGTVEPDAERSDREAGAGRPVQLDEEGRSRPNDDAPIAK
Ga0247829_104129763	3300033550	Soil	MARRPKTTDEPRIGRKDLQDPDRDVRKGSVERDAERSDREAGAGRPVQLDEEGRSRPAGSDSPRPADDAVVPK
Ga0370498_041847_803_1006	3300034155	Untreated Peat Soil	MTRKAKTTEEPRIGRKDLQDPDRDVRSPRKGNVEPDGERSDQDAGAGRPVQLDEEGRSRPSDDAPVAK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters