Metagenome / Metatranscriptome Family F052403

Basic Information
Family ID	F052403
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	44 residues
Representative Sequence	MKKHFAILLFVVLALGLCVPPVFAQASGTVKGVCKDAQGNPIVDGVV
Number of Associated Samples	125
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.28 %
% of genes near scaffold ends (potentially truncated)	97.89 %
% of genes from short scaffolds (< 2000 bps)	90.85 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Unclassified (71.831 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.789 % of family members)
Environment Ontology (ENVO)	Unclassified (22.535 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.930 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 2.67% Coil/Unstructured: 64.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF06508	QueC	92.96
PF04055	Radical_SAM	2.11
PF13394	Fer4_14	1.41
PF01242	PTPS	1.41
PF01564	Spermine_synth	0.70
PF14534	DUF4440	0.70
PF02129	Peptidase_S15	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	92.96
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	92.96
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	92.96
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	92.96
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	92.96
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	92.96
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	92.96
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	92.96
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	92.96
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	1.41

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.83 %
All Organisms	root	All Organisms	28.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.83 %
cellular organisms	root	All Organisms → cellular organisms	28.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	23.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	23.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	23.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.83 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.83 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10320180	Not Available	553	Open in IMG/M
3300001593\|JGI12635J15846_10373070	Not Available	868	Open in IMG/M
3300001661\|JGI12053J15887_10186032	Not Available	1066	Open in IMG/M
3300002245\|JGIcombinedJ26739_100533807	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1050	Open in IMG/M
3300002245\|JGIcombinedJ26739_101689664	Not Available	532	Open in IMG/M
3300004091\|Ga0062387_100080752	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300004091\|Ga0062387_100205881	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1192	Open in IMG/M
3300005434\|Ga0070709_11390232	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005467\|Ga0070706_100630814	Not Available	995	Open in IMG/M
3300005541\|Ga0070733_10436116	Not Available	874	Open in IMG/M
3300005541\|Ga0070733_10716352	Not Available	672	Open in IMG/M
3300005542\|Ga0070732_10108452	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1639	Open in IMG/M
3300005591\|Ga0070761_10222632	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1123	Open in IMG/M
3300005712\|Ga0070764_10081100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1707	Open in IMG/M
3300006034\|Ga0066656_10311253	Not Available	1016	Open in IMG/M
3300006059\|Ga0075017_101585299	Not Available	517	Open in IMG/M
3300007265\|Ga0099794_10344359	Not Available	775	Open in IMG/M
3300009143\|Ga0099792_10475505	Not Available	778	Open in IMG/M
3300009521\|Ga0116222_1134683	Not Available	1064	Open in IMG/M
3300009521\|Ga0116222_1182223	Not Available	904	Open in IMG/M
3300009552\|Ga0116138_1237611	Not Available	504	Open in IMG/M
3300009665\|Ga0116135_1199414	Not Available	764	Open in IMG/M
3300009762\|Ga0116130_1145036	Not Available	748	Open in IMG/M
3300009792\|Ga0126374_10438940	Not Available	924	Open in IMG/M
3300010341\|Ga0074045_10319186	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1017	Open in IMG/M
3300010343\|Ga0074044_10539783	Not Available	761	Open in IMG/M
3300010358\|Ga0126370_10889058	Not Available	803	Open in IMG/M
3300011120\|Ga0150983_14121134	Not Available	525	Open in IMG/M
3300011269\|Ga0137392_11492355	Not Available	535	Open in IMG/M
3300012189\|Ga0137388_10768804	Not Available	893	Open in IMG/M
3300012208\|Ga0137376_11215191	Not Available	643	Open in IMG/M
3300012361\|Ga0137360_11103497	Not Available	685	Open in IMG/M
3300012925\|Ga0137419_11343193	Not Available	602	Open in IMG/M
3300014498\|Ga0182019_10782206	Not Available	681	Open in IMG/M
3300015245\|Ga0137409_10320673	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1357	Open in IMG/M
3300015372\|Ga0132256_100748445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1093	Open in IMG/M
3300016702\|Ga0181511_1090624	Not Available	605	Open in IMG/M
3300016702\|Ga0181511_1258266	Not Available	615	Open in IMG/M
3300016750\|Ga0181505_11051792	Not Available	567	Open in IMG/M
3300017823\|Ga0187818_10539230	Not Available	525	Open in IMG/M
3300017934\|Ga0187803_10385119	Not Available	567	Open in IMG/M
3300017936\|Ga0187821_10034334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1796	Open in IMG/M
3300017936\|Ga0187821_10296598	Not Available	641	Open in IMG/M
3300017942\|Ga0187808_10577445	Not Available	523	Open in IMG/M
3300017943\|Ga0187819_10074233	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2026	Open in IMG/M
3300017943\|Ga0187819_10828996	Not Available	519	Open in IMG/M
3300017946\|Ga0187879_10754640	Not Available	542	Open in IMG/M
3300017993\|Ga0187823_10263922	Not Available	587	Open in IMG/M
3300018006\|Ga0187804_10187322	Not Available	881	Open in IMG/M
3300018006\|Ga0187804_10259348	Not Available	751	Open in IMG/M
3300018006\|Ga0187804_10581492	Not Available	508	Open in IMG/M
3300018038\|Ga0187855_10647949	Not Available	615	Open in IMG/M
3300018047\|Ga0187859_10500522	Not Available	676	Open in IMG/M
3300018085\|Ga0187772_10664230	Not Available	745	Open in IMG/M
3300018086\|Ga0187769_11330721	Not Available	543	Open in IMG/M
3300018088\|Ga0187771_11850108	Not Available	513	Open in IMG/M
3300018088\|Ga0187771_11938642	Not Available	500	Open in IMG/M
3300020583\|Ga0210401_10215199	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300021088\|Ga0210404_10770984	Not Available	549	Open in IMG/M
3300021170\|Ga0210400_10225351	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1528	Open in IMG/M
3300021178\|Ga0210408_11063768	Not Available	624	Open in IMG/M
3300021180\|Ga0210396_11266369	Not Available	615	Open in IMG/M
3300021180\|Ga0210396_11444877	Not Available	567	Open in IMG/M
3300021181\|Ga0210388_10766865	Not Available	837	Open in IMG/M
3300021401\|Ga0210393_10558241	Not Available	935	Open in IMG/M
3300021406\|Ga0210386_10609859	Not Available	942	Open in IMG/M
3300021406\|Ga0210386_11505738	Not Available	561	Open in IMG/M
3300021420\|Ga0210394_10370651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1259	Open in IMG/M
3300021420\|Ga0210394_11170194	Not Available	661	Open in IMG/M
3300021433\|Ga0210391_10230904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1454	Open in IMG/M
3300021433\|Ga0210391_10758932	Not Available	759	Open in IMG/M
3300021474\|Ga0210390_11462872	Not Available	542	Open in IMG/M
3300021475\|Ga0210392_11304365	Not Available	543	Open in IMG/M
3300021478\|Ga0210402_11696895	Not Available	558	Open in IMG/M
3300021479\|Ga0210410_10595955	Not Available	982	Open in IMG/M
3300021559\|Ga0210409_10736821	Not Available	857	Open in IMG/M
3300021560\|Ga0126371_10655339	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1198	Open in IMG/M
3300022557\|Ga0212123_10642497	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300023019\|Ga0224560_112543	Not Available	529	Open in IMG/M
3300023068\|Ga0224554_1101878	Not Available	661	Open in IMG/M
3300023250\|Ga0224544_1003070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2241	Open in IMG/M
3300024288\|Ga0179589_10154825	Not Available	980	Open in IMG/M
3300025509\|Ga0208848_1011349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1871	Open in IMG/M
3300025604\|Ga0207930_1130127	Not Available	553	Open in IMG/M
3300025898\|Ga0207692_11145669	Not Available	516	Open in IMG/M
3300025905\|Ga0207685_10145560	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1067	Open in IMG/M
3300025906\|Ga0207699_11158254	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300025910\|Ga0207684_10267198	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1476	Open in IMG/M
3300025928\|Ga0207700_10059468	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2890	Open in IMG/M
3300026322\|Ga0209687_1144830	Not Available	765	Open in IMG/M
3300026328\|Ga0209802_1116335	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300026557\|Ga0179587_10716720	Not Available	659	Open in IMG/M
3300026839\|Ga0207764_120495	Not Available	591	Open in IMG/M
3300027505\|Ga0209218_1049245	Not Available	848	Open in IMG/M
3300027590\|Ga0209116_1046378	Not Available	936	Open in IMG/M
3300027684\|Ga0209626_1215657	Not Available	508	Open in IMG/M
3300027701\|Ga0209447_10220258	Not Available	517	Open in IMG/M
3300027738\|Ga0208989_10080855	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300027842\|Ga0209580_10268552	Not Available	849	Open in IMG/M
3300027867\|Ga0209167_10251637	Not Available	949	Open in IMG/M
3300027905\|Ga0209415_10302130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1379	Open in IMG/M
3300028016\|Ga0265354_1023787	Not Available	585	Open in IMG/M
3300028536\|Ga0137415_10004128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14384	Open in IMG/M
3300028747\|Ga0302219_10039511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1761	Open in IMG/M
3300028789\|Ga0302232_10345877	Not Available	732	Open in IMG/M
3300028873\|Ga0302197_10501617	Not Available	529	Open in IMG/M
3300028906\|Ga0308309_11660901	Not Available	543	Open in IMG/M
3300029701\|Ga0222748_1106887	Not Available	551	Open in IMG/M
3300029882\|Ga0311368_10072203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3046	Open in IMG/M
3300029910\|Ga0311369_11150958	Not Available	602	Open in IMG/M
3300029945\|Ga0311330_10158698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2134	Open in IMG/M
3300029952\|Ga0311346_10711598	Not Available	868	Open in IMG/M
3300029957\|Ga0265324_10235818	Not Available	621	Open in IMG/M
3300030058\|Ga0302179_10329755	Not Available	672	Open in IMG/M
3300030507\|Ga0302192_10192484	Not Available	884	Open in IMG/M
3300030580\|Ga0311355_10106267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3110	Open in IMG/M
3300030580\|Ga0311355_11651576	Not Available	548	Open in IMG/M
3300030617\|Ga0311356_10333076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1513	Open in IMG/M
3300030737\|Ga0302310_10737897	Not Available	509	Open in IMG/M
3300031028\|Ga0302180_10657807	Not Available	500	Open in IMG/M
3300031708\|Ga0310686_100707410	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1208	Open in IMG/M
3300031715\|Ga0307476_10575281	Not Available	835	Open in IMG/M
3300031715\|Ga0307476_11397944	Not Available	509	Open in IMG/M
3300031718\|Ga0307474_10030756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3935	Open in IMG/M
3300031720\|Ga0307469_10494426	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1070	Open in IMG/M
3300031823\|Ga0307478_10900203	Not Available	740	Open in IMG/M
3300031938\|Ga0308175_101232059	Not Available	832	Open in IMG/M
3300031945\|Ga0310913_10908793	Not Available	619	Open in IMG/M
3300031962\|Ga0307479_11024910	Not Available	794	Open in IMG/M
3300031962\|Ga0307479_11801440	Not Available	564	Open in IMG/M
3300032180\|Ga0307471_103662211	Not Available	544	Open in IMG/M
3300032261\|Ga0306920_102927470	Not Available	647	Open in IMG/M
3300032770\|Ga0335085_10315008	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1848	Open in IMG/M
3300032805\|Ga0335078_10143488	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3389	Open in IMG/M
3300032829\|Ga0335070_11413836	Not Available	635	Open in IMG/M
3300032895\|Ga0335074_10471356	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1319	Open in IMG/M
3300032898\|Ga0335072_11714293	Not Available	523	Open in IMG/M
3300032955\|Ga0335076_10060012	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3759	Open in IMG/M
3300033977\|Ga0314861_0353308	Not Available	652	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.89%
Host-Associated	Host-Associated	2.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.58%
Aquatic	Environmental → Aquatic	18.31%
Plants	Host-Associated → Plants	2.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.61%
Freshwater	Environmental → Aquatic → Freshwater	16.90%
Peat	Environmental → Terrestrial → Peat	11.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.11%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.70%
Sediment	Environmental → Aquatic → Sediment	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.90%
Loam	Environmental → Terrestrial → Soil → Loam	14.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.11%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.15%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.11%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.41%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.04%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.04%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.23%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.52%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.52%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.82%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.11%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.11%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.41%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.41%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.41%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.41%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.70%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.70%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023019	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026839	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 52 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_103201801	3300001356	Peatlands Soil	MKKYFVILLFAILALGLCVPPVFAQASGTVSGTCKDAQG
JGI12635J15846_103730701	3300001593	Forest Soil	MKKHFAILLFAILALGLCVPPVFAQASGTVKGTARDA
JGI12053J15887_101860322	3300001661	Forest Soil	MKKHFAVILFVVLALGLCVPPVFAQASGTVKGVCKDPQGTP
JGIcombinedJ26739_1005338073	3300002245	Forest Soil	MKRHFAVFVLVLLMLAFCAPMVFAQAAGTVKGVCKDAQ
JGIcombinedJ26739_1016896641	3300002245	Forest Soil	MKKHFAVFAFVLLMLGLCASPVVAQSGTVKGVCKDVDGKP
Ga0062387_1000807523	3300004091	Bog Forest Soil	MKKHFAVFAVVLLVLGLGAPTVFAQGASGTVKGVCKDAQGNPIVDGVVVWAN
Ga0062387_1002058811	3300004091	Bog Forest Soil	MKRYFAIVLLAVVAVGMSVPAMFAQASGTVKGVCKDAQGTPVADGVVVWNNVDN
Ga0070709_113902321	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKKHFAGFVFVLLMLAFCAPTVFAQAAGTVKGVCKDQQGNPI
Ga0070706_1006308141	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKKHFAILLFVLLALGLCVPPVFAQAAGSVKGVCKDAQGTPLVDAV
Ga0070733_104361161	3300005541	Surface Soil	MKKRFAIFLFVLLAIGLCVPPVFSQAAGTVKGVCKDNQGNPIVDGVVLWTNMD
Ga0070733_107163521	3300005541	Surface Soil	MKKHFAILLFVILALGLSVPPVFGQASGTIKGTCKDADGKPVA
Ga0070732_101084521	3300005542	Surface Soil	MKKHFAILFSAILALGLCVPPVFAQASGSVKGVCKDPQGN
Ga0070761_102226321	3300005591	Soil	MKKHFAIFVLAILAAALCVPPAFAQASGSVKGVCKDA
Ga0070764_100811001	3300005712	Soil	MKKHFAVFAFVLLVLGFCASPVFAQSGTVKGVCKD
Ga0066656_103112532	3300006034	Soil	MKKHFGFILFAVVTLALCVPQVFAQASGSVKGVCKDPEGKPIAGGV
Ga0075017_1015852992	3300006059	Watersheds	MKKHFAIVLITVFSAILCAPVVFAQASGTVKGECK
Ga0099794_103443592	3300007265	Vadose Zone Soil	MRKYFAIFVFVVLVAGLCVPPVFAQASGSVKGVAK
Ga0099792_104755052	3300009143	Vadose Zone Soil	MKRHFAIFALVVLVLGLCVPPVFAQASGTVKGVCKDVEGK
Ga0116222_11346831	3300009521	Peatlands Soil	MKKYFAILLFAILALGLCVPPLLAQASGSVTGVCKDAQGNPIVDGVV
Ga0116222_11822231	3300009521	Peatlands Soil	MKKHFVILLSAVLAVGLCAAPVFGQAAGSAKGTCKDADGKPIV
Ga0116138_12376111	3300009552	Peatland	MKKHLAVFALVLLVFGVCTSPVFAQGASGSVKGVCKDAD
Ga0116135_11994142	3300009665	Peatland	MKKHFAIFVLAVLAAALCVPSVFAQASGSVKGVCKDAQGNPFADAVVVWVNTDNG
Ga0116130_11450361	3300009762	Peatland	MKKHLAVFALVLLVFGVCTSPVFAQGASGSVKGVCKD
Ga0126374_104389402	3300009792	Tropical Forest Soil	MKKHLAIIGSLMLALGLCSVPVFAQASGTVKGACKDAEGNPIAG
Ga0074045_103191863	3300010341	Bog Forest Soil	MKKYFAIVLFAVLAVGLCVPAVFAQASGTVKGVCKDAQGNPVADGVVVWN
Ga0074044_105397831	3300010343	Bog Forest Soil	MKKLFAMFVFLLLMLGLCVPPVFSQASGTVKGVCRDFQGNPIAD
Ga0126370_108890582	3300010358	Tropical Forest Soil	MKKHFSVLLFVVVALGLWVPPAFGQAGTVKGVCRDAQGNPVADGVVVYTNLD
Ga0150983_141211342	3300011120	Forest Soil	MLLDSWAAGRQKMKKHFAILLFAILALGIGAPRLFAQGTIKGVCKDADGKPIAGAVVVYA
Ga0137392_114923551	3300011269	Vadose Zone Soil	MKKHFAVLLFVALALGLSVPPVFAQASGSVKGVCKDAQ
Ga0137388_107688041	3300012189	Vadose Zone Soil	MKKHFAILLFAILAMGICVPSVLAQATGSVKGACKDA
Ga0137376_112151912	3300012208	Vadose Zone Soil	MKKHFAILFFAILALGLCVPPVFAQASGSVKGICKDAQG
Ga0137360_111034973	3300012361	Vadose Zone Soil	MRKHFAMLVFVVLILGLCATSLFGQASGTVKGVAKDV
Ga0137419_113431931	3300012925	Vadose Zone Soil	MRKHFAILVFVVLILGLCATSLFGQASGTVKGVAKDVQGNPIVDGVV
Ga0182019_107822061	3300014498	Fen	MKKYFAILLFAVLALGLCVPPVLAQASGSVKGVCKDAQGNPI
Ga0137409_103206733	3300015245	Vadose Zone Soil	MRTKFAILVIAVLAVGLCVPPVFAQASGTVKGVCKDAAGTPIVDGV
Ga0132256_1007484453	3300015372	Arabidopsis Rhizosphere	MKKHFAIFLIAVLAAALCVPVAFAQASGTVKGTCRDAQ
Ga0181511_10906242	3300016702	Peatland	MKKHLAVFALVLLVFGVCTSPVFAQGASGSVKGVCKDADGNPI
Ga0181511_12582662	3300016702	Peatland	MKKHFAILLFAILALALCVPPGFAQASGSVKGVCKDAQGNVVADAVVLWANMDNG
Ga0181505_110517921	3300016750	Peatland	MKKHFAIFLFAILALGLCVPPVFAQASGTVKGVCKDADGKPIAEAIVLY
Ga0187818_105392302	3300017823	Freshwater Sediment	MKKHFAIFLFITLAVGLCVAPAFGQASGTVKGVCKDATGAPIVDGIVVYANLD
Ga0187803_103851191	3300017934	Freshwater Sediment	MKKHLAIFLFTVLAVGLCMPRGFGQASGTVKGVCKDVQGNYIVDAVVVYSNLD
Ga0187821_100343341	3300017936	Freshwater Sediment	MKKHFVAGLLVALLAGLLLPPVFAQSTGSVKGVCKDG
Ga0187821_102965982	3300017936	Freshwater Sediment	MKKHLAIFLFVILALGLCVPPVFAQASGTVKGVCKDAQGNPIADATVVWTNMDNG
Ga0187808_105774451	3300017942	Freshwater Sediment	MKKHLAIIVVAVLALGLCVPHVLAQASGTVKGVCKDAQGNPIADG
Ga0187819_100742334	3300017943	Freshwater Sediment	MKKRFAIFLFALLSLGLCLPPVFGQASGSVKGVCKDAQGTPIVDGVVVWANMDN
Ga0187819_108289961	3300017943	Freshwater Sediment	MKTRFAILLLAVLALGLCIPPVFGQASGTVKGVCKDSDGNPVVDGIVVYAN
Ga0187879_107546401	3300017946	Peatland	MKRHLVVFGLSLVMLGLCAPAVFAQGASGTVKGVCKDVQGNPIVDGVV
Ga0187823_102639222	3300017993	Freshwater Sediment	MKKRFAILLFVILATGPCVPPVFAPTSGSVKGTAKD
Ga0187804_101873221	3300018006	Freshwater Sediment	MKKHFAILFSALLALGLCVPPLFAQASGSIKGVCKDAQGSPIVDGVV
Ga0187804_102593482	3300018006	Freshwater Sediment	MKKRFAIFLFALLSLGLCLPPVFGQASGSVKGVCKDAQGTPIADGVVVW
Ga0187804_105814922	3300018006	Freshwater Sediment	MKKHFALFVLVLLMLGLCVPPVFSQASGSVKGVCKDTD
Ga0187872_103328212	3300018017	Peatland	MKKHLAMFALVLLMMGLCAPPVFAQAASGTVKGVC
Ga0187855_106479492	3300018038	Peatland	MKKHLAIFVLVVLAAALCVPPVFAQASGSVKGICKDAQGNPF
Ga0187859_105005221	3300018047	Peatland	MKKHFAIFVLAVLAAALCVPSVFAQASGSVKGVCKDAQGNPFADA
Ga0187772_106642301	3300018085	Tropical Peatland	MKRQLAILLFVLLAAGLYVPSVFAQASGTVKGVCKDPTGAPIADGIV
Ga0187769_113307211	3300018086	Tropical Peatland	MKKHLAIFLFTVLAVGLCMPRVFGQASGTVKGVCKDVQGNPVVNGVV
Ga0187771_118501082	3300018088	Tropical Peatland	MKKHFAILLFTVLALGLFAPRVAAQASGTVKGVCKD
Ga0187771_119386422	3300018088	Tropical Peatland	MKKHFAIFLFAVLALGLCIPSLFAQASGTVKGVCKDA
Ga0210401_102151993	3300020583	Soil	MKKRFAMFVFLVLMLGLCAPPGFSQASGTVKGVCKDPQGNPIVD
Ga0210404_107709842	3300021088	Soil	MRKHLAVSVFVLLMLGLCVPSGFAQASGTVKGVCKDTDGKPLP
Ga0210400_102253511	3300021170	Soil	MKKHFAVFAFVLLVLGFCASPVFAQSGTVKGVCKDVDGKP
Ga0210408_110637682	3300021178	Soil	MRKHFAMLVFVVLILGLCAPALFGQASGTVKGVARDV
Ga0210396_112663691	3300021180	Soil	MKKHFAILLFAILALGIGAPRLFAQGTIKGVCKDADGKPIAGAIVVY
Ga0210396_114448771	3300021180	Soil	MKKHFAVSAFIFLMLGMCSPSALAQASGTVKGVAKDAQGNPL
Ga0210388_107668651	3300021181	Soil	MKKHCAILLFVVLALGLSLPSAFAQASGTVKGVCKDAQGNPIA
Ga0210393_105582412	3300021401	Soil	MKKHFAIFLFAVLALGLCVPPVFAQASGTVKGVCRD
Ga0210386_106098592	3300021406	Soil	MKKYFVILLFAILVLGLCFPPAFAQASGTVKGVCKDAQGNPVADGVVIWANQD
Ga0210386_115057381	3300021406	Soil	MKKHLAIFSFILLTLALSAPSLFAQAAGTIKGVCKDIQGNPIADGVVQLVNID
Ga0210394_103706513	3300021420	Soil	MKKYFAILLFATLALGLCAPTVFAQASGSVEGVCKDAQGNPIADAV
Ga0210394_111701941	3300021420	Soil	MRKHFAVFVVVLAMLGLCAPLGFAQSSATVKGVCKDLQGN
Ga0210391_102309041	3300021433	Soil	MKKHFAVSAFIFLMLGMCAPSALAQASGTVKGVAKDA
Ga0210391_107589321	3300021433	Soil	MQKRYFAILLLAILTLGLCVPPVSAQASGTVKGVCKDAQGNVIPDAIVLWTNTDN
Ga0210390_114628721	3300021474	Soil	MKKHFAVFVLLVLMLGLCAPPVFSQASGTVKGVCKDRDGKP
Ga0210392_113043651	3300021475	Soil	MKKHFAILLMVILALGVCVPSVLAQATGSVKGVCKDAQGTPIADA
Ga0210402_116968951	3300021478	Soil	MKKHLAIFSLVLLMLGLSAVPVFAQGSSGTVKGVCKDAQGNPIVDGVVVWA
Ga0210410_105959552	3300021479	Soil	MKRHFAGFVVVLLMLGLCASPVFAQGASGTVKGVCKDAQGNPIA
Ga0210409_107368212	3300021559	Soil	MKKHLAIFSFILLTLALCAPSLFAQAAGTIKGVCKDIQGNPI
Ga0126371_106553391	3300021560	Tropical Forest Soil	MKKHLAIIVFVVLALGLCAPALFAQASGTVKGTCRDAEGKPIAG
Ga0212123_106424971	3300022557	Iron-Sulfur Acid Spring	MKKHFAGFVFVLLMLGLCVPPAFSQASGTVKGECKD
Ga0224560_1125431	3300023019	Soil	MKKHFAVFVFVLLLLGLCVPPGFSQASGTVKGVCKDVQ
Ga0224554_11018782	3300023068	Soil	MKKHFAIFSFVLLIVGLCLTPVFAQNSGSVKGVCKDTDGKPVAGGLVIFANQDT
Ga0224544_10030704	3300023250	Soil	MKKHFAVFVFVVLVLALCVPPVFAQNSATVKGVCKDLQGNPIADGTVLYVNQT
Ga0179589_101548253	3300024288	Vadose Zone Soil	MTKRFAILLFAILALGLFVPSVFAQQGTVKGVCKDAQGAPIAEAVVVYAN
Ga0208848_10113491	3300025509	Arctic Peat Soil	MKKYFAILLFAALALGLWVPTVSAQSGSVKGVCKDSQGNVIA
Ga0207930_11301272	3300025604	Arctic Peat Soil	MKKYFAILLFAALALGLWVPTVSAQSGSVKGVCKDSQGNVIADAIVLWANL
Ga0207692_111456692	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKKHFSIVLITLLAAALSAPVAFAQASGTVKGTCKD
Ga0207685_101455603	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKKHFAILLFVVLALGLCAPPVFAQASGSVKGVCKDAQGNPIADAVIVWTNMDN
Ga0207699_111582541	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKKHFAGFVFVLLMLAFCAPTVFAQAAGTVKGVCKDQQGNPIAD
Ga0207684_102671983	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKKHFAILLFVLLALGLCVPPVFAQAAGSVKGVCKDAQGTPLVDAVVVW
Ga0207700_100594685	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKKYFAIFSIVVLAMGLCVLPVFGQASGTVKGVCKDAQGAPVVDGIVVWT
Ga0209687_11448301	3300026322	Soil	MKKHFGFILFAVVTLALCVPQVFAQASGSVKGVCKDLEGK
Ga0209802_11163353	3300026328	Soil	MRKYFAIFVFVVLVAGLCVPPVFAQASGSVKGVAKDAEGKPFVGAVVEFMN
Ga0179587_107167202	3300026557	Vadose Zone Soil	MRKRFAVFVFVVLAVGLCAPPVFAQASGTVKGVCKDAQGN
Ga0207764_1204952	3300026839	Tropical Forest Soil	MKKHFAILLFVVLALGLCVPPVFAQASGSVKGTCKDAQGSPVADG
Ga0209218_10492452	3300027505	Forest Soil	MKKHFAILLFAILALGIGAPRLFAQGTIKGVCKDADGKPIAGAVVVY
Ga0209116_10463782	3300027590	Forest Soil	MKKHFAILLFVVLALGLCVPPVFAQASGTVHGVCTDAQGN
Ga0209009_11259052	3300027667	Forest Soil	MKKRFAGFALVLVMLALCAPSGFAQASGSVKGLCK
Ga0209626_12156572	3300027684	Forest Soil	MKKRFAMLVFIFLMLGISAPQVFAQASGTVKGVCKDTDGKPI
Ga0209447_102202581	3300027701	Bog Forest Soil	MKRYFAIVLLAVVAVGMSVPAMFAQASGTVKGVCKDAQGTPVADGVVVWNNVDNGQ
Ga0208989_100808553	3300027738	Forest Soil	MRKHFAILVFVVLILGLCATSLFGQASGTVKGVAKDVQGNPVV
Ga0209580_102685521	3300027842	Surface Soil	MKKHYAILLFAVLAAALWVPPVFGQAGSVKGVCKDVQGNPVADGVVVWTN
Ga0209167_102516371	3300027867	Surface Soil	MKKHLAIFTFILLMLALSAPSLFAQAAGTIKGVCKD
Ga0209415_103021303	3300027905	Peatlands Soil	MKKHFAIFVFVVLAAAFCAPSVFAQASGSVKGVCKDPQGNPI
Ga0265354_10237871	3300028016	Rhizosphere	MKKHFAIQAFVFVLLMLGLCVPSGFSQASATVKGVCKDVDG
Ga0137415_100041281	3300028536	Vadose Zone Soil	MRKHFAILVFVVLILGLCATSLFGQASGTVKGVAKDVQGNPIV
Ga0302219_100395113	3300028747	Palsa	MKKHFALFVLVLAMLALCAPLGFAQASATVKGVCKDAQGNPFPDAIVIYVNQ
Ga0302232_103458772	3300028789	Palsa	MKKLFAVFALVVLMLGRCALPVLAQGASGTVKGVCKDAQGNPIVDGVVV
Ga0302197_105016172	3300028873	Bog	MKKHFAGFALMFLMLGLFVLPVVAQTASGTVKGVCKDTDGNPIV
Ga0308309_116609011	3300028906	Soil	MRKHFAVLAVVLVMLGLCAALPVFAQESATVKGVCKDLQGN
Ga0222748_11068872	3300029701	Soil	MKKYFVILLFAILALGLCLPPAFAQASGTVKGVCKDAQGNPVVDGV
Ga0311368_100722031	3300029882	Palsa	MKKHFAVFVFVVLVLALCVPPVFAQNSATVKGVCKDLQGNPIADGTVLY
Ga0311369_111509582	3300029910	Palsa	MKKYFAIFVLAILAAVLCVPPVFAQASGSVKGVCKDAQGNPFADA
Ga0311330_101586984	3300029945	Bog	MKKHFAGFALMFLMLGLFVLPVVAQTASGTVKGVCKDTDGNPIVDGIV
Ga0311346_107115981	3300029952	Bog	MKKHFAGFALMFLMLGLFVLPVVAQTASGTVKGVCKDTDGNPIVDGIVVFAN
Ga0311342_106784061	3300029955	Bog	MKKHFEVFALVLAMLALCAPLGFAQASATMKGVCKDVQG
Ga0265324_102358181	3300029957	Rhizosphere	MKKYLAILLFATLALGLSVPAVFAQASGSVKGVCKDAQGNPIADGIVVWTN
Ga0302179_103297552	3300030058	Palsa	MKKHFAIFVLAVLAAALCVPSVFAQASGSVKGVCKDAQGNP
Ga0302192_101924842	3300030507	Bog	MKMKKHFAVLSFFLLALGLCTTAGFAQASGTVKGVCKDTDGK
Ga0311355_101062671	3300030580	Palsa	MKKHFAIFVLAVLAAALCVPSVFAQASGSVKGVCKDAQGNPFADAV
Ga0311355_116515761	3300030580	Palsa	MKKHLAVFGFVFLMLGLCAPPVFAQASGTVKGVCKDSDGKPIVDAVVLYAN
Ga0311356_103330761	3300030617	Palsa	MKKHFALFVLVLAMLALCAPLGFAQASATVKGVCKDAQGNPFPDAIVI
Ga0302310_107378972	3300030737	Palsa	MKKHFAIFLFAVLTLGVAVPLASAQSASVKGVCKD
Ga0302180_106578071	3300031028	Palsa	MKKHLAVFVFVFLVLGLCAPPVFAQAAGTVKGVCKDADGKPIVD
Ga0310686_1007074103	3300031708	Soil	MKKHFAILFSVVLALGLCVPPVFAQASGSVKGVCKDPQGNP
Ga0307476_105752812	3300031715	Hardwood Forest Soil	MKKHVASLVFVLVMLGLSATPVSAQVASGTVKGVVKD
Ga0307476_113979441	3300031715	Hardwood Forest Soil	MKKHYAIFLFAVVAVALSVPSVFAQTGTVKGVCKDSTGAPIAEAYVVWTN
Ga0307474_100307561	3300031718	Hardwood Forest Soil	MKKHYAILFSLLLLLGLGVPAVFAQASGSVKGVVKDPQGN
Ga0307469_104944263	3300031720	Hardwood Forest Soil	MKKYFAIFSFVVLFAGLSVPSAIAQASGTVKGVCKDQ
Ga0307478_109002031	3300031823	Hardwood Forest Soil	MKRHFAGFVLVLLMLGLCASPVFAQGASGTVKGICKDPQGNPIADAVVL
Ga0308175_1012320591	3300031938	Soil	MKKQLGFILFAVLALALCVPPVFAQASGSVKGICKDPEGKPIAS
Ga0310913_109087932	3300031945	Soil	MKKHLAIIGFVILVLGLSLPSAFAQNSGTVKGTCKD
Ga0307479_110249101	3300031962	Hardwood Forest Soil	MKKHLAIFLFAVFALGLCVPSVFAQGSVKGTCKDAQGNPIADGIVVWTNMDNG
Ga0307479_118014401	3300031962	Hardwood Forest Soil	MKKHFAVFVFVLLMLGLCVPPVFSQASGTVKGVCKDSQGNPIVDGI
Ga0307471_1036622111	3300032180	Hardwood Forest Soil	MKKHFAILLFVVLALGLCVPPVFAQASGTVKGVCKDAQGNPIVDGVV
Ga0306920_1029274701	3300032261	Soil	MKKHLAIIGFVILVLGLSLPSAFAQNSGTVKGTCKDAEGKPIATGLVL
Ga0335085_103150084	3300032770	Soil	MKKHLAIFVFILLALGLCVPPVFAQASGTVKGTCKDVEG
Ga0335078_101434885	3300032805	Soil	MKKHFAIFAITVLLLAFCVPAVFAQASGTVKGSCKDAQGNPVVDA
Ga0335070_114138361	3300032829	Soil	MKRKLAILAVTAMAMTLAVGLCVPPAFAQASGTVKGVCKDS
Ga0335074_104713563	3300032895	Soil	MKKRFAIFLTAVLALGLSLPAAFAQASGSVKGTCKDVQGNPIANGVVVWTNMD
Ga0335072_117142932	3300032898	Soil	MNKPIAIILFALLTLGMCVPAAIAQASGTVQGTCKDAQGN
Ga0335076_100600126	3300032955	Soil	MKKHLTVLGFAVLLLGFCVPPLFGQASGTVKGVCKDQQGNPIV
Ga0314861_0353308_1_159	3300033977	Peatland	MKKHFAIFLFTVLALGLCVPLVFGQASGTVKGVCKDATGAPIVDGIVVYSNLD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052403

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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