Metagenome Family F052302

Basic Information
Family ID	F052302
Family Type	Metagenome
Number of Sequences	142
Average Sequence Length	111 residues
Representative Sequence	MMRTPVDPESEIRRTIYGMDGIAPGFLRERRAWEDRIPPEEDEIGTSGSKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVENLIRGVKARADQEMENWCPDR
Number of Associated Samples	3
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	3
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Roots → Unclassified → Unclassified → Root (97.887 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.85% β-sheet: 0.00% Coil/Unstructured: 56.15%
Feature Viewer

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF04195	Transposase_28	13.38
PF13456	RVT_3	1.41
PF03732	Retrotrans_gag	0.70

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization

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Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Roots	Host-Associated → Plants → Roots	97.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.11%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified	97.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.11%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	97.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.11%

Habitat	Taxonomy	Distribution
Root	Host-Associated → Plants → Roots → Unclassified → Unclassified → Root	97.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.11%

Visualization

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Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300014486	Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaG	Host-Associated	Open in IMG/M
3300015261	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0182004_100053654	3300014486	Root	MMRTLVDPESEIRRTIYGMDGIAPRFLRERRSWEDRIPTEEDEAGTSGEGGGSETGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIRGVKVRADQEMEN*
Ga0182004_100062726	3300014486	Root	MMRTPVDPQSEIRCTIYGMDRIAPGFPQERRSREDRIPAEEDEIGTSGDHGGRETGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIRGIKACAD*
Ga0182004_100090364	3300014486	Root	MMRTRVDPESEIRRTIYGMDRIAPGFLRERRSWEDRILDEEDEAGTSGGGGGSKTGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIRGVKAQADQEMEN*
Ga0182004_100122156	3300014486	Root	MMCTPVDPQSEIKGTIYGIDGIAPGFLRECRSWEDRIHAEEDEAGTSGGGGASETGTWKTADDDGWFPSLVDLCLRHGGSLENVEELIRGVKARDDQEMENWCPNRIRIRASTDPSEPNIFMDDRKEAEMWEHLKTFASG*
Ga0182004_100156115	3300014486	Root	MMRTPVDPQSEIKGTIYGMDGIAPGFLRECRSWEDRIPAEEDEAGTSGRGGGRETGTWKTVDDDGRFPSLVDLFLHHGGSLETVEELI*
Ga0182004_100178802	3300014486	Root	MVALACMMRTPVDPESEMRRMIYGMDGIAPRFLRERRSWENRIPADEDEAGTSGGGGGSETGTWKTVDHDGQFPSLVDLFLRHGGSLQTVEELIRSVKARAN*
Ga0182004_100182579	3300014486	Root	MVALACMMCTPIDPQSEIKGKIYGINGIDPGFLRERRSWKDRIPAEEDEAGTSGGGGASETGTWKTVDDGGRFPSLVDLFLHHGGSLETVEELIRGVKACADQ*
Ga0182004_100196696	3300014486	Root	VPATIPAESGQADGVVALACMMHTPVDPESEIRRTIYGMDGIAPGFLRERRAWEDRIPAEEDEAGTSGSKDGTWKTVDDDGRFPSIVDLFLRHGGSLETVEDLIRGVKARADLEMENWCPDRIRIRASTDPSEPNIFLDDRKEAEK*
Ga0182004_100200245	3300014486	Root	VPTAIPAESGRADGVVALACMMRTPVDPESEVRRTIYGMDRIAPGFLRERRSWEDRIPAEEDEAGTSGGGGGSETGTWKTVGDDGRVPSLVNLFLCHGGSLETIEELIHGVKAWADQEMEN*
Ga0182004_100223232	3300014486	Root	MRTPVDPQSEIRGTIYDMDGIAPGFLRERRSWEDRIPAEEDEAGTSGGGGGSKTGTWKMVDDDGRFPSLVDLFLRHGGSLETVEELIRGVKARADQEMENWCPD*
Ga0182004_100227841	3300014486	Root	MMRTPVDPQSEIKGMIYGIEGITPGFLRERRSWEDRILAEEDKARTSGGGGASETGTWRTVDDDERFPSLIDLFLRHRGSLETI*
Ga0182004_100243882	3300014486	Root	VVVLAYMMRTPVDLESEIRRTIYGMDGIAPVFLRERRSWEDRIPTEEDEAGMSGGGGGSKTGTWKMVDDDGRFPSLVDLFLLLIFGNAIRK*
Ga0182004_100252661	3300014486	Root	VVALAYMMRTPTDPDSEIRRTIYGMDEIAPGFLRGRRSWEERVPTEEDEIGTSGGGGGSETGTWKMVDDDGRFPSLVDLFLRHGGSLKTVEELIRGVMARADQEMENWCLLTVLNAHI*
Ga0182004_100256489	3300014486	Root	VILVESGRADGVVALACMMRTPVDPDSEIRRTIYGMNGIAPGFLRGRRAWEERVPSEEDEIRTSGGGGGSETGTWKTVDDDGRFPSLVDLFLRHGGSLKTVEELIRGIKPRADQEMENWCPDRIRIRASTDPFEPNIFLDDRKEAEKWEHVEE
Ga0182004_100266009	3300014486	Root	MMRTPIDPQSETKGTIYGIDGIAPGFLRERRSWEDRIPAEEDEAGTSGGGGTSETGTWKTVDDDRRCSSLIDLFLRHGGSLETVEEL
Ga0182004_100272584	3300014486	Root	MMRTPVDPESEIRRTIYGMEGIALGFLRERRAWEDRIPAEEDEAGTSGSKDGTWKTVDDDGRFPSLVDLFLCHGGSLETVEDLIRGVKARADQEMENWLPRSI*
Ga0182004_100312194	3300014486	Root	VVALACMMRTPIDPESEIRRTIYDMDGIAPGFLRERRSWEDRIPTEEDEARTSGDGGGSKTGTWKTVDDDGRFPSLVDLFLGHGGSLETVEELIRGVKARAD*
Ga0182004_100324641	3300014486	Root	MMRTPADPDSEIRRTIYGMDGIAPGFLRRRRSWEERVPSEEDEIVMSEGGGGSKTGTWKMVDDDGRFPSLVDLFLRHGGSLETVEDLI*
Ga0182004_100328354	3300014486	Root	MMRTPVDRQSEIKGTIYGIDRIAPGFLRERRSWEDRIPAEEDEARTSGGGGAGKTGTWKMVDDDGRFPSLIDLFLRHGGSLETVEELIRGVKVRADQEMENWCPDRIRI*
Ga0182004_100355696	3300014486	Root	MMRTPVDPESEIKRTIYGMDGIAPGFLRERRAWEDRIPAEEDEARTSGSKDDTWKTVDDDRRFPSLVDLFLRHGGSLEAIEDLILGVKARADREMENWCPDRIRIRASTDPSEP
Ga0182004_100360563	3300014486	Root	MMRTPVDPESEIRRTIYGMDGIAPGFLRERRSWEDRIPAEEDEAGTSGGGGGSETGTWKTVDDDGQFPSLVDLFLRHGGSLETVEELIRGVKARAD*
Ga0182004_100369824	3300014486	Root	MMRTPVDPQSEIKGTIYVMDGIAPGFLRECRPWEDRILAEEDEAGTSGGGGGSETGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELI*
Ga0182004_100375072	3300014486	Root	MMRTPVDPESEIRRTIYGMDGIAPGFLRERRAWEDRIPTEEDEAGTSGGGGSSETGTWKTVDDDGRFPSLVDLFLRHGGSLEAVEDLIRGVKARADQEMENWCPDRIRIWASTDPSEPNTSWTIGRTLRSGSMSRSSASG*
Ga0182004_100376784	3300014486	Root	MRTPADPESEIRRTIYVMDGIAPGSLRERRAWEDRIPPEEDEFVTSGSKDDTWKTVDDDGRFPCLVDLFLCNGGSLETVEDLIRGVKARADREMENWCP
Ga0182004_100388813	3300014486	Root	MMRTPVEPNSEIKRTIYGMDVIAPGFLRERRAWDDRIPAEEDEAGTSGGGGSSETGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIHGVKARADQEMEN*
Ga0182004_100388991	3300014486	Root	VVVLACMMRTLVDPESEIRRTIYGMDGIAPGFLRERWSWEDRIPAEEDEAGTSGGGGGSETGTWKTVDDDGRFPSLIDLFLRHGGSLETVEELIRGVKARADQEMENWCPDRIRIRASTD
Ga0182004_100396493	3300014486	Root	VIPVESGRADGVVALACMMRTPIDPESEIRRTIYGMDRIALGFLRGCRLWKDRIPAEEDEAGTSGGGGGSKTGTWKTVDDDGRFPSFVDLFLRHGGSLETVEELIHGIKAWAD*
Ga0182004_100406403	3300014486	Root	VVALACLMRTPTDPESEIKRTIYGMDGIAPGFLRERRAWEDRFPSEEDEIGTSGSKDGTWKTVDDDGRFPCLVDLFLHHGGSLETVENLIRGVKARADREMENWCPDRIRI*
Ga0182004_100432165	3300014486	Root	DPDSEIRRTIYGMDGIAPGFLRGRRSWEERVPSEEDEIGTSGGGGGSETGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIRGVKARAD*
Ga0182004_100442464	3300014486	Root	MMRTPVDPQSEIKGTIYGMDGIAPGFLRERRSWEDRIPAEEDEVGTSGGGGSSETGTWKTVDDDLRFPSLVDLFLHHDGSLETVEELI*
Ga0182004_100450304	3300014486	Root	MMRTPVDPESEIRRMIYGMDGIAPGFLRERRAWEDRIPPEEDEIGTSGSKDGTWKTVDDDGRFPCLVNLFLRHGGSLETVEDLIRGVKARADREMENWCPDRIRIRAS
Ga0182004_100466941	3300014486	Root	MMRTPVDPQSEIRGTIYGMDGIAPRFLRERRSWEDRVPAEEDEIRTWGGGGGSEIGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIRGVKARAD*
Ga0182004_100467933	3300014486	Root	MMRTPADPNSEIRRTIYGMDGIALGFLRGRRSWEERVPSEEDEIGTLGGGGGNETGTWKTVDDVGWFPSLVDLFLRHGGSLETVEELIRGVKARAD*
Ga0182004_100478172	3300014486	Root	MMRTLADPQSEIKGTIYGIEGIAPGFLRERRSWEDCIPAEEDEAGTSGGGGASETGTWKTVDDDWRFPSLIDLFLHHGGSLETVEELIRGVKVRADGEMENWCPDRIRIRASTDPSKLNIFLDDRKGGQKVGTS*
Ga0182004_100485211	3300014486	Root	MDGIAPGFLRERRAWEDHFPSEEDEIGTSGTKDSTWKTVDDDGRFPCLVDLFLRHGGSLETVEDLIRGVKARADREMEHWCPD
Ga0182004_100494663	3300014486	Root	LADGVVALTCMMRTPADPDSEIRRTIYGMDGIAPGFLRERRSWEDRIPAEEDEARTSCGGGGSETGTWKTVDDKGRFPSLVDLFLRHGGSLETVEELIRGVKARADQ*
Ga0182004_100495231	3300014486	Root	MMRTPADPESEIKGTIYGMDGIAPGFLRERRAWEDHFPSEEDEIGTSGSKDGTWKTVDDDGRFPSLVDLFLRHRGSLETVEDLIRGVKARADREMEHWCPDRIRIRASTDPSEPN
Ga0182004_100498991	3300014486	Root	MDGIAPRFLRERRAWEDRFPSDEDEIETSGSKDGTWKTVDDDGWFPCLIDLFLRHGGSLETVENLIRGVKARADREMENWCPDRIRIRA
Ga0182004_100506432	3300014486	Root	MMRTPVDPESKIRRTIYGMDGIAPGFLRERRSWEERVPAEEDEIGTSGGGGGSETGTWKTVDDDGRFPSLVDLFLRHGRSLKTVEELIRGV*
Ga0182004_100520333	3300014486	Root	MRTPVDPESEIRRTIYGMDEIAPGFLRERRSWEDCIPVEEDEAGTSGRGGGSKTGTWKTVDDDGWFPSLVDLFLRHGGSLETVEELIRAVKARADQEMENWCPDRIRIRASTDPCEPNIF
Ga0182004_100526061	3300014486	Root	MMRTPVDPQSEIKGTIYGIDGIAPGFLRERWSWEDRIPVEEDEAGMSGGGGASETGTWKTVDDDGWFPSLVDLFLHHGGLLETVEQLIRGVKSRAD*
Ga0182004_100530491	3300014486	Root	MMRTPADPESEIRRTIYGMDGIAPGFLRERRAWEDRFPSEEDEIGMSGSKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVEDLIRGVKARGDREMEHWCPDRIRIRASTDPFEPNIFLDDRKDA*
Ga0182004_100530823	3300014486	Root	MMRTPVDPQSEIKSTIYGIDGIAPGFLRERRSWEDRIPAEKDEARTSGGGGASETGTWKTVDDDGRFPSLIDLFLHHGGSLETVEELIRGVKARADQEMENWCPDRIRIRASTDPSEPNIFG*
Ga0182004_100552991	3300014486	Root	MMRTPVDPDSEIRRTIYAMDGIAPGFLRGRRSWEERVPAEEDEIGTSGGGGGSETGTWKMVDDDGRFPSLVDLFLRHG
Ga0182004_100559741	3300014486	Root	VIPAESGRADGVVALACKMRTPVDPESEIRRTIYGMDGITPGFLRERRAWEDRIPPEEDEIRTSGSKDGTWKTVDDDGWFPCLVDLFLRHGGSLETVENLIRGVKARADQEMENWCPDR
Ga0182004_100570071	3300014486	Root	MMRTLVDPKSEIRRTIYGMDGIAPGFLRERRSWEDHIPAEEDEAGTSGGGGGSETGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIRGVKARADQEMENW
Ga0182004_100605501	3300014486	Root	MMRTPTDPESEIKRTIYGMDGIAPGFLRERRAWEDRVPSEEDEIGTSGTKDGTWKTVDDDGQFPCLVDLFLRHGGSLETVENLIRGVKARADREMENWCPDRIRIRASTDPSEPNIFLDDKKEAEKWEHV
Ga0182004_100611151	3300014486	Root	MMRTPVDPESEIRRTIYGMDRIAPGFLRERRAWEDHIPAEEDEAGTSGSKDGNWKTVDDDGRFPSLVDLFLRHGGSLETVEYLIRG
Ga0182004_100657002	3300014486	Root	MMRTPVDPESEIRRTIYGMDGIAPGFLRERRSWEDSIPAEEDEAGTSGGGGGSETGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIRGVKARADQEMENWCPDRI
Ga0182004_100668353	3300014486	Root	MMRTPVDPESEIRRTIYGMDRIAPGFLRERRAWEDCIPAEEDEAGTSGGGGISETGTWKTVDDDGRFPSLVDLFLCHGGSLKAVEDLIRGVKARADQEMENWCPDQIRIRASTDPSEPNIFLDDRKEAQK*
Ga0182004_100700352	3300014486	Root	MMCTPINPQSEIKGTIYGMDGIAPGFLRERRSWEDRIPAEEDEAGTSGGGGASETGTWKTVDDDGRFPSLIDLFLRHGGSLETVEELIRGVKVRAD*
Ga0182004_100702261	3300014486	Root	MMRTLVDPQSEIRGTIYGMDGITPGFLRERRSWEDRIPAEEDEIGTSGGGGGSATGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELI
Ga0182004_100703121	3300014486	Root	IPTESGRSDGVVALACMMRTPVDPQSEIRRTIYGMDGIAPGFLWERRSWEDRVVAYDLRHGRCGGSETGTWKTMDDDGRFPYLVDLLLRHGGSLETVEELIRGV*
Ga0182004_100710752	3300014486	Root	MMRTLVDPQSEIKGTIYGIDGIAPGFLQERRSWEGRIPAEEDEAGTSGGGGASETGTWKMVDDDGRFPSLIDLFLRHGGSLETVKELIRGVKARADQEMENWCPDQIRIRASTNPSEPNIFLDNRKEAEK*
Ga0182004_100715173	3300014486	Root	MMRTPVDLEFEIRRTIYGMDGITPGFLWECRSWEDRIPAEEDEAGTSSGGGGSEMGTWKTVDDDRRFPSLVDLFQRHGGSLETVEELIRGVKARADQEMENWCPDRIRIRASTDP
Ga0182004_100717183	3300014486	Root	MMCTPTYPESEIKRTIYGMHGIAPGFLRERRAWEDHFPSEEDEIGTSGTKDGTWKTVDDDGQFPCLVDLFLRHGGSLETVEDLIHGVKARADREMEHWCPDRIRIRASTDPSEPNIFLDDRKEAEKWEHVE
Ga0182004_100718551	3300014486	Root	MMCTPVDPESEIKGMIYGMDGITPGFLRERRAWEDRFPSEEDEIGTSGSKDGTWKTVDDDGQFPCLVDLFLCHGGSLETVENLIRGVKARADREMENWCPDRIRIRASTDPSEPNI
Ga0182004_100749911	3300014486	Root	MMRTPADPDSEIRRTIYSMDGIAPGFLWGRRSWEERVPSEEDEIGTLEGGGGSKTGTWKMVDDDGRFPSLVDLFLRHGGSLETVEELIRGVKARADQEMENWR
Ga0182004_100756061	3300014486	Root	MMRTPTDPESEIKRTIYGMDRIAPGFLRERRAWEDRFPSEEDEIGLSGSKDGTWKTVDDDGRFPCLVDLFLRHGGCLETVENLIRGVKARADREMENWCPDRIRIRASTDPSEPNI
Ga0182004_100758821	3300014486	Root	MMRTPVDPESEIRRMIYGMDGIVPGFLRERRAWEDRIPTEEDEAGTSGSQDGTWKTVDDDGRFPSLVGLFLRHGGSLEAVEDLIHGVKARADREMENWCPDRIRIRASTDPSEPNIFLDDRKEAE
Ga0182004_100791462	3300014486	Root	MMCTPADPQSEIKGTIYGIEGIAPGFLRERRSWEDRIPAEEDEAGTSGGGGASETGTWKTVDDDGRFPSLIDLFLRHGGSLETVEELIRGVKAREDEEMENWCPDRIRIRASTDPSEPNIFLDDRKEAEKWEHLKELR
Ga0182004_100809093	3300014486	Root	MMRTPTDPESEIRRTIYGMDGIAPGFLQERRAWEDRFPSEEDEIGTSRSKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVENLIRSVKAWA
Ga0182004_100816012	3300014486	Root	MMRTPVDPESEIWGTIYGMDGIAPGFLWERRAWEDRIPAEEDEVGTSGSQDGTWKTVDDDGQFPSLIDLFLHHGGFLETVENLIRGVKA*
Ga0182004_100816023	3300014486	Root	MMCTPVEPQSEVKGTIYGIDGVAPGFLRERRLWEDRIPAEEDKAGTSGGGGASETGTWKTVDDDGQFPSLVDLFLRHGGSLETVEELIRGVKARADQEMEN*
Ga0182004_100832252	3300014486	Root	MMRTPIDPESEIRRTIYGMERIAPGFLWERRAWEDCIPPKEDEIGTSGSKHGTWKTVDDDGRFPCLVDLFLRHGGSLETIENLIRGVKARADREMENWCPDRIRIRASTDPSEPNIFLDD
Ga0182004_100850701	3300014486	Root	MMRTPIDPQSEIKGTIYGIDGIAPGFLRERRSWEDRIPAEEDEAGTSGGGGANETGTWKTVDDDRRFPSLIDLFLRHGGPLETVEELIRGVKACADQEMENWCPDRIRIRA
Ga0182004_100882405	3300014486	Root	DSEIRRTIYGMDGIAPGFLRGRRSWEERVPSEEDEIGTSKGGGGSKTGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIRGVNACADQEMEN*
Ga0182004_100920032	3300014486	Root	MMRTPADPDSEIRRTIYGMDGIAPGFLRGRRSWEERVPSEEDEIGTSKGGGGSKTRTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIRGVKARADQEMEN*
Ga0182004_101000121	3300014486	Root	MMRTPADPESEIRRTIYGMDGIAPGFLQERRAWEDRFPSEEDEIGTSRSKDGTWKTVDDDGRFPCLVDLFLRHGGSLET
Ga0182004_101021272	3300014486	Root	MMRTPTDPESEIKRTIYGMDGIAPGFPRERRAWEDRFPSEEDEIGTSGSKDSTWKTVDDDGRFPCLVDLFLRHGGSLETVENLIRDVKARADREMENWCPDRIRIQAFTDPSEPNIFLDDKKEAEKWEHV*
Ga0182004_101048953	3300014486	Root	MMRTPADPESEIKRTNYDMDGIAPGFLRLRRAWEDRFPSEEDEIGTSGSQDGTWKTVDDDGRFPCLVDLFLRHGGSLKTVENLIRGVKARAD*
Ga0182004_101077821	3300014486	Root	VIPAERERADGVVALACMMRTPTDPKSEIRRTIYGMDGIAPRFLRERRAWEDRIPVEEDEAGTSGSQDGTWKTVDDDGRFPSLVDLFLRHGGSL
Ga0182004_101132741	3300014486	Root	RADGVVALACMMRTPTDPESEIKRTIYGMDGIAPGFLRERRTWEDHFPSEEDEIETSGTKDGTWKMVDDDGRFPCLVDLFLHHGGSLETVEDLIRGVKAGPTVNPDYIPHVDAQG*
Ga0182004_101133292	3300014486	Root	MMRTPADPESEIRRTIYGMDGIAPGFLWERRAWEERFPSEEDEIETSGSKDGTWKTVDDDGRFPSLVDLFLRHGGSLETVEDLIRGVKARADREMENWCPDRIRIRASTDPSEPNIFLDDRKEAEKWEHVE
Ga0182004_101184051	3300014486	Root	MMRTPADPDFEIRRTIYGMDGIAPGFLRECRPWEERVPSEEDEIGTSKGGGGSKTGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIRGVKARADQEMENWCPDR
Ga0182004_101187332	3300014486	Root	MMRTPTDPESEIKRTIYGMDGIAPGFLREHRAWEDRFPSEEDEIGTSGSKDGTWKTVDDDGRFPCLVDLFLHHGDSLETVENLIRGVKARADREMENWCPDRIRIRASTDPSEPNIF
Ga0182004_101192131	3300014486	Root	MMRTPVDPESEIRRTIYGMDGIIPGFLRERRSWEDCIPAEEDEVGTSGSKDGTWKTVDDDGRFPSLVDLFLRHGGSLETVEDLIRGVKARADQEMENWCPDRIRIRASTDPSEPNIFLDDRKEAEKWEH
Ga0182004_101211322	3300014486	Root	MIRTPTDPESEIKRTIYGMDGIAPGFLRERRAWEDHFPSEEDEIGTSRTKDGTWQMVDDDGRFPCLVDLFLRHGGSLETAEDLIRGVKARADREMEHWCPDRIRIRASHDP
Ga0182004_101211351	3300014486	Root	MMRTPTNPESEIKRTIYDMDGIAPGFLRERRAWEDRFPSEEDEIGSSGSKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVENLIRGVKA
Ga0182004_101216031	3300014486	Root	MMRTPADPDSEIRRTIYGIDGIALGFLRGRRSWEERVPSEENEIGTSGGGGGSETGTWKTVDDDGRLPSIVDLFLHHGGSLETVEELIRGVKTRADQEMENWCPDRIRIRASTDPSEPNIFLDDRKEAEKWEH
Ga0182004_101222491	3300014486	Root	MMRTPADPESEIRRTIYGMDGIAPGFLRERWAWEDRIPPEEDEIGTSGSKDGTWKMVDDDERFPCLVDLFLHHGGSLETFEDLIRGVKARADREMENWCPDRIRIRASTDPSEPNIFLDD
Ga0182004_101222672	3300014486	Root	VVALACMMRIPTDPESEIKRTIYGMDVIAPGFLQERRAWEDRFPSEEDEIGTSGTKDGTWKTVDDDGRFPCLVDLFLCHGGSLETVEDLIRGVKARADREMEH*
Ga0182004_101235561	3300014486	Root	MMRTPTDPESEIKRTIYGMDGIAPWFLRDRRAWEDRFPSEEDEIGTSGSKDGTWKTMDDDGRFPCLVDLFLRHGGSLETVENLIRGVKARADREMENWCP
Ga0182004_101240181	3300014486	Root	MMRTPADPDSEIRRTIYGMDGIAPGFLRGRRSWEERVPSEEDEIGTSEGSGGSKTGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIRGVKARADQEMENWCPDRIRIRASTDPSEPNIFLDDRK
Ga0182004_101243601	3300014486	Root	MMCTPTDPESEIKRTIYGMDGIAPGFLRERRAWEDHFPSEEDEIGTSGTKDRTWKMVDDDGRLPCLVDLFLRHGGSLETVEDLIRGVKARADREMEHWCPDRIRIRASHDPSEPNIFLDDRKEAEKWEHV
Ga0182004_101274852	3300014486	Root	MMRTPVDPDSEIRRTIYGMDGIAPGFLRGHRSWEERVPSEEDEIGTSGGGGGSETGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIRGVKARADQEMENWCPDR
Ga0182004_101299671	3300014486	Root	MMRTPADPESEIRRTIYGMDGIAPGFLQERRAWEDRFPSEEDEIGSSGSKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVENLIRGVKARADREMENWCPDRIRI
Ga0182004_101382841	3300014486	Root	VDGVVALACMMRTPTDPESEIKRTIYDMDGIAPGFLWERRAWEDHFPSEEDEIGTSGTKDGTWKTVDDDGRFPCLVNLLLRHGGSLETVEDLIRGVKARADRAMEHWCPDRIRIRASHDPSEPNIFLDDRKEAEKWEHVEELC
Ga0182004_101386502	3300014486	Root	MMRTPTDPESEIKRTIYGMDGIAPGFLRERRAWEDRFPFEEDEIGSSGSKDGTWKMVDDDGRFPCLVDLFLRHGGSLETVENPIRGVQARADREMENWCPDRIRIRASTDPSEPNIFLDDKKEAEKWE
Ga0182004_101404112	3300014486	Root	MMRTPTDPESEIKRTIYDMDGIAPGFLRERRAWEDRFPSEEDEIGSSGSKDGTWKMVDDDGRFPFLVDLFLRHGGSLETVENLIRGVQARAD*
Ga0182004_101438782	3300014486	Root	MMCTPVDPQSEIRGTIYGMDGITSGFLRERRSWEDRVPAEEDEIGTSGAGGGSETGTWKTVDDDGRFPSLVDLFLRHRGSLETVEELIRGVKARADQEMENWCPDQIRIRASTDPSEPNIF*
Ga0182004_101439482	3300014486	Root	MMRTPTDPEFEIKRTIYGMDGIAPGFLRERRAWEDHFPSEEDEIGTSGTKDGTWKTVDDDGRFPCLVDLFLRHEGSLETVEDLIRGVKARADREMEHWCPDRIRIRASHDPSEP
Ga0182004_101477832	3300014486	Root	VVALAYMMRTPIDPESEIRRTIYGMDGIAPGFLRERRAWEDRIPAEEDEAGTSGSQDGTWQTVDDDGRFPSLVDLFLRHGGSLETVEDLIRGVKARADREMEN*
Ga0182004_101538802	3300014486	Root	MMRTLTDPESEIKRTIYGMDGIAQGFLRERRAWEDRFPSEEDEIGSSGSKDSTWKTVDDDGRFPCLVDLFLHHGGSLKAIENLIRGVKARADREMENWCPDRIRIRASTDPSEPNIFLDD
Ga0182004_101550791	3300014486	Root	VVALAYMMRTPVDPESEIRRTICGMDGIAPGFLRERRSWEDRIPAEEDKAGTSGGSGGGETGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIRGVK
Ga0182004_101608682	3300014486	Root	MMRTPIDPESEIRRTIYGMDGIAPGFLRERRAWEDRIPAEEDEAGTSGSKDGTWKTVDDEGRFPSLVDLFLRHGGSLEAVEDLIRGVKARADREMENWCPDRIRIRASTDP
Ga0182004_101624852	3300014486	Root	MMRTPADPESEMRRTIYGMDGIAPGFLRERRAWEERFPSEEDEIGTSGSKDGTWKMVDDDGRFRCLVDLFLRHGGSLETVENLIRGVKARADREMENWCPDRIRIRASTDPSEPNIFLDDKKEAEKWEHV
Ga0182004_101646091	3300014486	Root	MMHTPTDPESKIKRTIYGMDGIAPGFLRERRVWEDRFPSKEDEIGSSGSKDGTWKTVDKDGRFPGLVDLFLRHRGSLETVDNLICGVKVRADREMENWCPDRIRIRASTDPSEPNIFLDDKKEAEKWEH
Ga0182004_101650612	3300014486	Root	VVALACKMRTPTDPESEIKRTIYGMDGIALGFLRERRAWEDRFPSEEDEIGTSGTKDGTWKAVDDDGRFPCLVDLFLCHGGSLETVEDLIRGVKARADREMEHWCPDR
Ga0182004_101651001	3300014486	Root	MMHTPADPESEIKRTIYGVDGIAPGFLRERRAWEDHFPSDEDEIGMSGSKDGTWKMVDDDGRFPCLVDLLLRHGGSLETVEDLIRGVKARADREMEHWCPDRIRIRASTDP
Ga0182004_101680671	3300014486	Root	MMRTPTDPESEIKRTIYGMDGIALGFLRERRAWEDRFPSEEDEIGTSGSQDGTWKTVDDDGRFPCLVDLFLCHGGSLETVENLIRGVKARADREMDNWCPDRIRIRASTDPSEANIFLDDKRRPRSGSMSRSSAFG*
Ga0182004_101703111	3300014486	Root	MMRTPTDPESEIKRMIYGMDGIAPGFLRERRAWEDRFPSEEDEIGTSGTKDRTWKTVDDDGRFPCLVDLFLRHGGSLETVEDLIRGVKARADREMKHW
Ga0182004_101762061	3300014486	Root	MMRTPTNPESEIKRTIYGMDGIAPGFLWERRAWEDHFPSEEDEIGTSGTKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVEDLIRGVKARADREMEHWCPDRIRIRASHDPSE
Ga0182004_101814712	3300014486	Root	MMRTPADPESEIRRAIYGMDGIAPGFLWERRAWEDHFPSEEDEIVSSGSKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVENLIRGVKARADREMENWCPDRIRIRASTDPSEPNIFLDDKKEAEKWE
Ga0182004_101832211	3300014486	Root	MMRTPVDPESEIRRTIDGMDGIAPRFLRERRAREDSIPAEEDEAGTSSGGGSSETGTWKTVDDDGRFPSLVDLFLRHGGSLEAVEDLIRGVKARADQEMENWCPDRIRIRASTDPSEPNI
Ga0182004_101863221	3300014486	Root	MMRTPVDPESEIRRTIYGMDGIDPGFLPERRAWEDRIPPEEDEIGSSGSKDTTWKMVDDDGRFPCLVDLFLRHGGSLETVENLIRGVKVRADREMENWCPDRIRIRASTDPSEPNIFLDDRKEAEKWEH
Ga0182004_101870421	3300014486	Root	MMRTPTDPESEIKRTIYGMDGIAPGFLRERRAWEDRFPSEEDEIGTLGSKDSTWKTVDDDRRFPCLVDLFLRHGGSLETVENLIRGVKARADREMENWCPDRIRI
Ga0182004_101907771	3300014486	Root	VVALAYMMRTPTDPESKTKRTIYSMDGIAPGFLRERRAWEDRFPSKEDEIGSSRSKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVENLIRGVK
Ga0182004_101912232	3300014486	Root	LACMMRTPADPESEIRRTIYGMDGIAPGFLRERRAWEDRFPSEEDEIRTSRSKDGTWKMVDDDGQFPCLVDLFLRHGGSLETVENLIRGVMARADREMENWCPDRIRIRASTDPSEPNIFLDDR*
Ga0182004_101933601	3300014486	Root	MMRTPADPESEIKRTIYGMDGIAPGFLRERRAWEDHFPSEEDEIGSSGSKDGTWKMVDDDGRFPCLVDLFLLHGGSLETVENLIRGVKARADREMENWCPDRIRIR
Ga0182004_101994311	3300014486	Root	TDPESEIRRTIYGMDGIAPGFHRERRAWEDRFPSEEDEIGTSGSKDATWKTVDDDGRFPCLVDLFLRHGGSLETVENLIRGVKALADREMENWCPDRIRIRASTNPSEPNIFLDDKKEAEK*
Ga0182004_101996291	3300014486	Root	MMRTPTDPESKIKRTIYGMDGIAPGFLRERRAWEDHFPSEEDEIGRTGTKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVEDLIRGVKARADREMEHWCPDRIRIRASHDPSEPNIFLDDRKEAEKWEHV
Ga0182004_101996691	3300014486	Root	LPGAPAAIRAESGRADGVVALACMMRTPTDPESEIKRTIYDMDGIAPGLLRERRAWEDRFPSEEDEIGTSGTKDGTWKTMDDDGRFPCLVDLFLRHGGSLETVENLIRGVKARADREMENWCPDRIRI*
Ga0182004_102025721	3300014486	Root	MPTDPESEIKRTLYGMDGIAPGFLRERRAWEDRFPSEEDEIGSSGSKDGTWKTVDDDGRFPCLADLFLRHGGSLETVENFLRGVKV
Ga0182004_102080112	3300014486	Root	TDPESEIRRTIYGMDGIAPGFHRERRAWEDRFPSEEDEIGTSGSKDGTWKTVDDDGPFPCLVDLFLRHGGSLETVENLIRGVKARADREMENWCPDRICIRASTNPSEPNIFLDDKKEAEK*
Ga0182004_102102731	3300014486	Root	VIRAELGRADGVVELACMMRTPTDPESEVRRTIYGMDGIAPGFLQERRAWEDCFPSEEDEIGTSGSKDSTWKMVDDDGRFPCLVDLFLRHGGSLETVENLIRGVKALADREMENWCPDRIRIRAS
Ga0182004_102124311	3300014486	Root	LACMMRTPVDPQSEIKGTIYDIEGIAPGFLRERRSWEDRIPTEEDEAGTSGGGAIDETGTWKTMDDDGRFPSFIDLFLRLGGSLETVHELIRGVKARAEEEMENWCPDRIRIRASTDPFEPNNFWMIGRRPKSGSILSSFTSGRSMWWGSCPTLSTMGSVRLTL*
Ga0182004_102191611	3300014486	Root	MMRTPTDPESEIKRTIYGMDGIAPGFLRERRAWEDRFPSKEDEIGSSGSKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVENLIRGVKARADREMENWCPDRIRIRASTDPSEPNIFLDDKKEAEKW
Ga0182004_102233651	3300014486	Root	GVPASIPAESGRADGVVALACIMRTPVDPQSEIRRTIYGMDGIAPGFHRECRSWEDRIPAEEDEAGISSGGGGSETGTWKTVDDDGRFPSLVDLFLRHGGSLETVEELIRGVKARADQDMENWCPNRIRIRASNDPSEPNIFLDDRKEAEK*
Ga0182004_102313451	3300014486	Root	MMRTPTDPESEIKRTIYGMDGIAPGFLREHRAWEDRFPSEEDEIGTSGSKDGTWKTVDDDERFPCLVDLFLHHGGSLETVENLIRGVKARADREMENWCPDRIRIRASTDPS
Ga0182004_102321851	3300014486	Root	MMRTPTDPDSEIRRTIYGMDGITPGFLWERRSWEDRIPAEEDEAGTSGGGGGSETVTWKMVDDDGLFPSLVDLFLRHGGSLETVEELIHGVKARADQEMENWC
Ga0182004_102355242	3300014486	Root	MMRTPTDPESEIKRTIYSMDGIAPGFLRERRAWEDHFPSEEDEIGSSGCKDGTWKTVDDDGRFPCLADLFLCHGGSLETVQNFIRGVKARADWEMENWCPDRIRIRASTDPSEPNIFLDD
Ga0182004_102397322	3300014486	Root	MAPAAIPAESGQADGVVALACMMRTPVDPEFEIRSTIYGMDGIAPGFLRERRAWEDRIPAEEDEAGTSGSKDGTWKMVDDDGLFPCLVDLFLRHGGSLETVEDLIRGVKARADQEMENWCPD
Ga0182004_102417811	3300014486	Root	MMRTPTDPESEIKRTIYGMDRIAPGFLRERRAWEDRFPSEEDEIGTSGSKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVENLIRGVKARADREMENWCPDRIRIRASTDPSEPNIFLDDKKEAEKWEHV
Ga0182004_102418551	3300014486	Root	MMRTPVDPESEIRKTIYGMDGIAPGFLRERRAWEDRIPPEEDEIGTSWSKDGTWKTVDDDWRFPCLVDLFLRRGGSLETVEDLIRAVKARADREMENWCPDRIRIRASTDPSEPNIFLDDRKEAEKWEHVEEL
Ga0182004_102613272	3300014486	Root	MAPAAIRAESGQVDGVVALACMMRTPVDPEFEIRSTIYGMDGIAPGFLRERRAWEDRIPAEEDEAGTSGSKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVEDLIRGVK
Ga0182004_102655001	3300014486	Root	MMRTPADPESEIGRTIYGLDGIAPGFLRERRAWEDLIPAEEDEAGTSGSQDGTWKTVDDDGRFPSLVDLFLHHRGSLEAIEDLIRGVKALADREMENWCPDRIRIRASTDPSEPNIFLDDRKEAEKWEHVEE
Ga0182004_102675321	3300014486	Root	ACMMRTPTDPESEIKQTIYGMDGIAPRFLRERRAWEDRFPSEEDEIGTSGTKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVEDLIRGIKARADREMEHWCPDRIRIRA*
Ga0182004_102676531	3300014486	Root	MIRTPTDPESEIKRTLYGMDGIAPGFLRERRAWEDRFPSEEDEIGSSGSKDGTWKTVDDDGRFPCLADLFLHHGGSLETVENFLRGVKVRADREMENWCPDRIRIRASSDPS
Ga0182004_102740561	3300014486	Root	VVALACLKRTPPDPKSDIKRTVYGMDGIAPGFLRERRAWEDRFHSEEDEIGASGTKDGTWKTMDDDGRFPCLVDLFLRHGGSLETVEGLIRGVKARADREMEH
Ga0182004_102791391	3300014486	Root	MDGIASRFLRERRSWEDCIPAEEDEAGTSSGGGGSKTGTWKTVDDDGRFPSHVDLFLRHGGSLETVEELIRGVKARADQEMENWWPDWIRIRASTDPSEPNIFLDD
Ga0182004_102801821	3300014486	Root	MMRTPTDPESEIKRTIYDMDGIAPGFLRERRAWEDRFPSEEDEIGSSGSKDGTWKTVDDGGRFPCLADLFLRHGGSLETVENFIRGVKARADREMENWCP
Ga0182004_102840142	3300014486	Root	ATIPAESGRADGVVALACMMRTPADPDSEIRRTIHGMDGNAPGFLRGRRSWEERVPSKEDEIGMSEGGGGSETGTWKTVDDDGRFPSLVDEFLRHGGSLETVEELI*
Ga0182004_102844402	3300014486	Root	MMRTPVDPESEIRRTIYGMDGIAPGFLRERRAWEDRIPPEEDEIGTSGSKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVENLIRGVKARADQEMENWCPDR
Ga0182004_102850611	3300014486	Root	MDGIAPRFLRERRSWEDCIPAEEDEAGTSSGGGGSEIGTWKTVDDDGRFPSHVDLFLRHGGSLETVEELIRGVKARADQEMENWWPDWIRIRASTDPSEPNIFLDD
Ga0182004_102882521	3300014486	Root	MMRTPTDPEFEIKRTIYGMDRIAPGFLRERQAWEDRFPSEEDEIGTSGTKDGTWKTVDDDGRFPCLVDLFLRHGGSLETVKDLIRGVKARADREMEHWCPDRIRIRASHDPSEPNIFLDD
Ga0182004_102887421	3300014486	Root	VDPESEIRGTIYGMDGIAPGFLRERRAWEDRIPAEEDEAGTSGSQDGTWKTVGDDGRFPSLVDLFLRHGGSLETVKNLIHGVKA*
Ga0182004_102916702	3300014486	Root	TIYGMDGIAPGFLRERRAWEDRFPSEEDEIGTSGSKDSTWKTVDDDRRFPCLVDLFLRHGSSLETVENLIRGVKARADWEMENW*
Ga0182004_102974971	3300014486	Root	MMRTPTDPESEIKRTIYGMDGITPGFLRERRAWEDRFPSKEDEIGTSGSKDSTWKTVDNDGRFPCLVDLFLRHRGSLETVENLIRGVKARADREMENWCPDRIRIRASTDPSEPNIFLDDKKEA
Ga0182006_10699691	3300015261	Rhizosphere	MMRTPTDPESEIKRTLYGMDGIAPGFLRERRAWEDRFPSEEDEIGSSGSKDGTWKTVDDDGRFPCLIDLFLRHGGSIETVENLIRGVQARADREMENWCPDRIRIRASTDPSEPNIFLDDKKEAEKWEHV
Ga0182005_10795042	3300015265	Rhizosphere	MMRTPTDPESEIKRTLYGMDGIAPGFLRERRAWEDRFPSEEDEIGSSGSKDGTWKTVDDDGRFPCLADLFLRHGGSLETVENFLRGVKVRADREMENWCPDRIRI
Ga0182005_12966951	3300015265	Rhizosphere	MMRTPADPDSEIRRTIYGMDGIAPGFLRGRRSWEERVPSEEDEIGTSKGGGGSKTRTWKTVDDDGRFPSLVDLFLRHRGSLETVEELIRGVKACADQEMENWCPDRIRIRASIDPSEPNIFLDDRKEA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052302

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences