Metagenome / Metatranscriptome Family F052250

Basic Information
Family ID	F052250
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	40 residues
Representative Sequence	RHHEGRGAWVLTAYGISGLALFGVLAYFFSDFISH
Number of Associated Samples	128
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.82 %
% of genes near scaffold ends (potentially truncated)	83.92 %
% of genes from short scaffolds (< 2000 bps)	83.22 %
Associated GOLD sequencing projects	122
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Unclassified (60.140 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.385 % of family members)
Environment Ontology (ENVO)	Unclassified (29.371 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.245 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.03% β-sheet: 0.00% Coil/Unstructured: 53.97%
Feature Viewer

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Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00586	AIRS	24.48
PF02769	AIRS_C	16.08
PF12969	DUF3857	4.90
PF00551	Formyl_trans_N	2.80
PF00579	tRNA-synt_1b	1.40
PF13432	TPR_16	1.40
PF13517	FG-GAP_3	1.40
PF00154	RecA	1.40
PF06800	Sugar_transport	0.70
PF14559	TPR_19	0.70
PF03992	ABM	0.70
PF03069	FmdA_AmdA	0.70
PF05426	Alginate_lyase	0.70
PF13673	Acetyltransf_10	0.70
PF12849	PBP_like_2	0.70
PF13649	Methyltransf_25	0.70
PF05960	DUF885	0.70
PF02790	COX2_TM	0.70
PF01425	Amidase	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0162	Tyrosyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.40
COG0180	Tryptophanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.40
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	1.40
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.70
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	0.70
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.70
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.70
COG4975	Glucose uptake protein GlcU	Carbohydrate transport and metabolism [G]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
All Organisms	root	All Organisms	39.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
cellular organisms	root	All Organisms → cellular organisms	39.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.16 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.66 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.08 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.29 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	16.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	9.79 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
asterids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
campanulids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
Asterales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
Asteraceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
Asteroideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
Anthemideae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
Anthemidinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
Tanacetum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.69 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.40 %
Tanacetum cinerariifolium	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	0.70 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_103279489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300001471\|JGI12712J15308_10000549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	11133	Open in IMG/M
3300005434\|Ga0070709_10172087	Not Available	1514	Open in IMG/M
3300005434\|Ga0070709_10289483	Not Available	1193	Open in IMG/M
3300005445\|Ga0070708_102259450	Not Available	502	Open in IMG/M
3300005533\|Ga0070734_10683220	Not Available	584	Open in IMG/M
3300005542\|Ga0070732_10246116	Not Available	1071	Open in IMG/M
3300005542\|Ga0070732_10337019	Not Available	907	Open in IMG/M
3300005559\|Ga0066700_11160212	Not Available	504	Open in IMG/M
3300005591\|Ga0070761_10007972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6043	Open in IMG/M
3300005602\|Ga0070762_10638044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300005610\|Ga0070763_10803480	Not Available	556	Open in IMG/M
3300005712\|Ga0070764_10032930	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2619	Open in IMG/M
3300005764\|Ga0066903_104470981	Not Available	746	Open in IMG/M
3300005764\|Ga0066903_107331166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300005874\|Ga0075288_1046832	Not Available	664	Open in IMG/M
3300005995\|Ga0066790_10078944	Not Available	1415	Open in IMG/M
3300006028\|Ga0070717_11996911	Not Available	523	Open in IMG/M
3300006162\|Ga0075030_100585457	Not Available	885	Open in IMG/M
3300006914\|Ga0075436_100350581	Not Available	1064	Open in IMG/M
3300007076\|Ga0075435_100342328	Not Available	1281	Open in IMG/M
3300009029\|Ga0066793_10682540	Not Available	584	Open in IMG/M
3300009525\|Ga0116220_10186801	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300009623\|Ga0116133_1001187	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	7625	Open in IMG/M
3300009628\|Ga0116125_1173766	Not Available	604	Open in IMG/M
3300009638\|Ga0116113_1208764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300009665\|Ga0116135_1351725	Not Available	590	Open in IMG/M
3300009759\|Ga0116101_1137025	Not Available	592	Open in IMG/M
3300009792\|Ga0126374_10031589	Not Available	2488	Open in IMG/M
3300009792\|Ga0126374_10232430	Not Available	1191	Open in IMG/M
3300009826\|Ga0123355_10024740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9655	Open in IMG/M
3300010047\|Ga0126382_11242916	Not Available	670	Open in IMG/M
3300010358\|Ga0126370_10055939	All Organisms → cellular organisms → Bacteria → Acidobacteria	2534	Open in IMG/M
3300010361\|Ga0126378_11084053	All Organisms → cellular organisms → Bacteria → Acidobacteria	902	Open in IMG/M
3300010376\|Ga0126381_100589284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1580	Open in IMG/M
3300010376\|Ga0126381_102829526	Not Available	692	Open in IMG/M
3300010379\|Ga0136449_102984587	Not Available	661	Open in IMG/M
3300011120\|Ga0150983_16168699	Not Available	1666	Open in IMG/M
3300011271\|Ga0137393_11677008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300012211\|Ga0137377_11371406	Not Available	636	Open in IMG/M
3300012212\|Ga0150985_120183778	Not Available	761	Open in IMG/M
3300012925\|Ga0137419_10754529	Not Available	793	Open in IMG/M
3300012927\|Ga0137416_12227540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300012944\|Ga0137410_12129492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300012971\|Ga0126369_12525788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300012987\|Ga0164307_10878848	Not Available	719	Open in IMG/M
3300014168\|Ga0181534_10347163	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	810	Open in IMG/M
3300014169\|Ga0181531_10432270	Not Available	810	Open in IMG/M
3300014968\|Ga0157379_10198089	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300016387\|Ga0182040_11183769	Not Available	642	Open in IMG/M
3300016404\|Ga0182037_10704402	Not Available	865	Open in IMG/M
3300017927\|Ga0187824_10374498	Not Available	516	Open in IMG/M
3300017928\|Ga0187806_1361461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300017934\|Ga0187803_10011582	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3524	Open in IMG/M
3300017938\|Ga0187854_10192350	Not Available	906	Open in IMG/M
3300017943\|Ga0187819_10607711	Not Available	619	Open in IMG/M
3300017955\|Ga0187817_10835195	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300017966\|Ga0187776_11412261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300017972\|Ga0187781_10022761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4351	Open in IMG/M
3300018007\|Ga0187805_10009177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4111	Open in IMG/M
3300018007\|Ga0187805_10101843	All Organisms → cellular organisms → Bacteria → Acidobacteria	1299	Open in IMG/M
3300018044\|Ga0187890_10462271	Not Available	712	Open in IMG/M
3300018062\|Ga0187784_10355541	Not Available	1187	Open in IMG/M
3300018085\|Ga0187772_10341592	Not Available	1033	Open in IMG/M
3300018088\|Ga0187771_10911993	Not Available	745	Open in IMG/M
3300018090\|Ga0187770_11213102	Not Available	610	Open in IMG/M
3300020580\|Ga0210403_10011407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7207	Open in IMG/M
3300020580\|Ga0210403_10614447	Not Available	877	Open in IMG/M
3300020581\|Ga0210399_11544971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300021046\|Ga0215015_10191725	Not Available	1156	Open in IMG/M
3300021168\|Ga0210406_11091184	Not Available	588	Open in IMG/M
3300021180\|Ga0210396_10082490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2918	Open in IMG/M
3300021181\|Ga0210388_10961645	Not Available	734	Open in IMG/M
3300021181\|Ga0210388_11030958	Not Available	704	Open in IMG/M
3300021401\|Ga0210393_11021979	Not Available	669	Open in IMG/M
3300021402\|Ga0210385_10001688	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	13543	Open in IMG/M
3300021402\|Ga0210385_11434429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300021403\|Ga0210397_10684574	Not Available	787	Open in IMG/M
3300021404\|Ga0210389_10230984	Not Available	1446	Open in IMG/M
3300021432\|Ga0210384_11180722	Not Available	669	Open in IMG/M
3300021433\|Ga0210391_10046715	All Organisms → cellular organisms → Bacteria → Acidobacteria	3449	Open in IMG/M
3300021474\|Ga0210390_10656633	Not Available	876	Open in IMG/M
3300021474\|Ga0210390_10671122	Not Available	865	Open in IMG/M
3300021475\|Ga0210392_10276681	Not Available	1197	Open in IMG/M
3300021475\|Ga0210392_10402913	Not Available	997	Open in IMG/M
3300022557\|Ga0212123_10078144	All Organisms → cellular organisms → Bacteria → Acidobacteria	2809	Open in IMG/M
3300024227\|Ga0228598_1009869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1908	Open in IMG/M
3300024295\|Ga0224556_1108895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300025412\|Ga0208194_1001888	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4207	Open in IMG/M
3300025898\|Ga0207692_10561557	Not Available	730	Open in IMG/M
3300025900\|Ga0207710_10615681	Not Available	568	Open in IMG/M
3300025906\|Ga0207699_10135751	Not Available	1611	Open in IMG/M
3300026499\|Ga0257181_1034992	Not Available	800	Open in IMG/M
3300027071\|Ga0209214_1039221	Not Available	633	Open in IMG/M
3300027575\|Ga0209525_1064715	Not Available	883	Open in IMG/M
3300027583\|Ga0209527_1021172	Not Available	1437	Open in IMG/M
3300027643\|Ga0209076_1209036	Not Available	533	Open in IMG/M
3300027648\|Ga0209420_1154759	Not Available	627	Open in IMG/M
3300027842\|Ga0209580_10086879	Not Available	1501	Open in IMG/M
3300027867\|Ga0209167_10053398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1991	Open in IMG/M
3300027879\|Ga0209169_10085037	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1634	Open in IMG/M
3300027889\|Ga0209380_10873053	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300027895\|Ga0209624_10001511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	18126	Open in IMG/M
3300027898\|Ga0209067_10710271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300027905\|Ga0209415_10149520	Not Available	2352	Open in IMG/M
3300027908\|Ga0209006_10000362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	45273	Open in IMG/M
3300028882\|Ga0302154_10178743	Not Available	1091	Open in IMG/M
3300028906\|Ga0308309_11184052	Not Available	659	Open in IMG/M
3300029907\|Ga0311329_10175457	Not Available	1668	Open in IMG/M
3300029910\|Ga0311369_10604605	Not Available	914	Open in IMG/M
3300029944\|Ga0311352_11165239	Not Available	587	Open in IMG/M
3300029999\|Ga0311339_10376959	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1489	Open in IMG/M
3300029999\|Ga0311339_11366340	Not Available	638	Open in IMG/M
3300030007\|Ga0311338_10586075	Not Available	1150	Open in IMG/M
3300030007\|Ga0311338_10786305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	950	Open in IMG/M
3300030399\|Ga0311353_10025543	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6377	Open in IMG/M
3300030509\|Ga0302183_10281162	Not Available	644	Open in IMG/M
3300030580\|Ga0311355_11458657	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300030596\|Ga0210278_1203252	Not Available	516	Open in IMG/M
3300030693\|Ga0302313_10081611	Not Available	1364	Open in IMG/M
3300030743\|Ga0265461_12973907	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300031231\|Ga0170824_105155714	Not Available	592	Open in IMG/M
3300031524\|Ga0302320_11978993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300031682\|Ga0318560_10695043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300031708\|Ga0310686_100429047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1690	Open in IMG/M
3300031715\|Ga0307476_10295273	Not Available	1188	Open in IMG/M
3300031719\|Ga0306917_11078914	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300031753\|Ga0307477_10462483	Not Available	865	Open in IMG/M
3300031754\|Ga0307475_10199358	Not Available	1600	Open in IMG/M
3300031823\|Ga0307478_11709604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300031912\|Ga0306921_11854576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300031962\|Ga0307479_11289686	Not Available	692	Open in IMG/M
3300032160\|Ga0311301_10723108	Not Available	1392	Open in IMG/M
3300032174\|Ga0307470_10496617	Not Available	889	Open in IMG/M
3300032180\|Ga0307471_100943574	Not Available	1030	Open in IMG/M
3300032805\|Ga0335078_10095499	All Organisms → cellular organisms → Bacteria	4303	Open in IMG/M
3300032805\|Ga0335078_11555374	Not Available	735	Open in IMG/M
3300032828\|Ga0335080_10436402	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300032954\|Ga0335083_10118698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2561	Open in IMG/M
3300033004\|Ga0335084_11451873	Not Available	679	Open in IMG/M
3300033158\|Ga0335077_10256902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1933	Open in IMG/M
3300034163\|Ga0370515_0016254	Not Available	3460	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.10%
Host-Associated	Host-Associated	4.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.12%
Aquatic	Environmental → Aquatic	13.99%
Plants	Host-Associated → Plants	4.20%
Arthropoda	Host-Associated → Arthropoda	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.33%
Freshwater	Environmental → Aquatic → Freshwater	11.89%
Peat	Environmental → Terrestrial → Peat	9.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.50%
Sediment	Environmental → Aquatic → Sediment	1.40%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.70%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.36%
Loam	Environmental → Terrestrial → Soil → Loam	16.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.40%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.70%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.40%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.40%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.70%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.38%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.20%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.20%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.10%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.10%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.40%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.40%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.70%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.70%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.70%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.70%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.70%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030596	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052250

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1032794892	3300000364	Soil	SIKHEGRGAWVLTAYGLSGLALFGVLAYFFSDFISH*
JGI12712J15308_100005493	3300001471	Forest Soil	MQHEGRGAWVLTAYGISGLALFGVIAYFFSDFISR*
Ga0070709_101720871	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	STTTTSIRKREGRGAWVLTCYGISGLALFGVLAYFFSDFIAH*
Ga0070709_102894831	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TTSAIRHKEGRGAWVLTCYSICGLALFGVLAYFISDFLAH*
Ga0070708_1022594501	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SAVQQSTRKREGRGAWVLTAYGISGLALFGLLAYFFSDFISH*
Ga0070734_106832202	3300005533	Surface Soil	AAIRHHEGRGAWVLTCYGICGLALFGVLAYFFSDFIAH*
Ga0070732_102461161	3300005542	Surface Soil	MENQSVSSKSSATQREGRGAWVLTAYGISGLALFGILIYYAS
Ga0070732_103370192	3300005542	Surface Soil	PSASQSTLIRKREGRGAWVLTAYGISGLALFGILAYFFSDFIAR*
Ga0066700_111602121	3300005559	Soil	VQQSTTTRKHEGRGAWVLTAYGISGLALFGLLAYFFSDFISH*
Ga0070761_100079722	3300005591	Soil	MRHHEGRGAWVLTAYGICGLALFGVLAYFFSDFIAH*
Ga0070762_106380442	3300005602	Soil	SATRHLAGRGAWVLTAYGISGLALFGLLAYFFSDFIAH*
Ga0070763_108034801	3300005610	Soil	AIRQREGRGAWVLTAYGVSGLALFGVLAYFFSDFISH*
Ga0070764_100329304	3300005712	Soil	STTTSAIRQHEGRGAWVLTCYGICGLGLFGVLAYFVSDFIAH*
Ga0066903_1044709812	3300005764	Tropical Forest Soil	SVKAHPREGRNFWVLTVYGISGLVLFGILAYYFSDFVAR*
Ga0066903_1073311662	3300005764	Tropical Forest Soil	TTTTSIRKREGRGAWVLTAYSISGLALFGVLAYFISDFISH*
Ga0075288_10468321	3300005874	Rice Paddy Soil	TISKHQHEGRGAWVLTAYGVSALALFGVLAYFFSDFIAH*
Ga0066790_100789442	3300005995	Soil	RHHEGRGAWVLTAYGISGLALFGVLAYFFSDFISH*
Ga0070717_119969112	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VKHHEGRGAWVLTAYGVVGLALFGVLAYFFSDFISH*
Ga0075030_1005854571	3300006162	Watersheds	TRQHEGRGAWVLTCYGICGLALFGVLAYFFSDFIAH*
Ga0075436_1003505811	3300006914	Populus Rhizosphere	PHEGRGAWVLTAYGISGLALFGVLAYFFSDFIAH*
Ga0075435_1003423282	3300007076	Populus Rhizosphere	SHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVAH*
Ga0066793_106825402	3300009029	Prmafrost Soil	RHHEGRGAWVLTCYGICGLALFGVLAYFFSDFISH*
Ga0116220_101868011	3300009525	Peatlands Soil	RQKEGRGAWVLTAYGIAGLAMFGVLAYFISEFISH*
Ga0116133_10011876	3300009623	Peatland	MSGRHHEGRGAWVLTAYGISGLALFGILAYFFSDFIAH*
Ga0116125_11737661	3300009628	Peatland	SGTHREGRGAWVLTAYGISGLALFGVLAYFFSDFIAH*
Ga0116113_12087642	3300009638	Peatland	VSPSYSQPSASGKQREGRGAWVLTAYGISGLALFAVLAYFFSDFIAH*
Ga0116135_13517251	3300009665	Peatland	QQSPQTSSSQAMSGRHHEGRGAWVLTAYGISGLALFGILAYFFSDFIAH*
Ga0116101_11370252	3300009759	Peatland	SALTRQREGRGAWVLTAYGISGLAVFAVLAYFFSDFIAR*
Ga0126374_100315891	3300009792	Tropical Forest Soil	VHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0126374_102324302	3300009792	Tropical Forest Soil	GVKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0123355_100247401	3300009826	Termite Gut	MKKYEGRGAWVLTCYSICGLALFGVLAYFFSDFIAH*
Ga0126382_112429161	3300010047	Tropical Forest Soil	KHEGRGAWVLTAYGISGLALFGVLAYFFSDFISH*
Ga0126370_100559391	3300010358	Tropical Forest Soil	MTRKKEGRGAWVLTAYGISGLALFGVLAYFFSDFISH*
Ga0126378_110840531	3300010361	Tropical Forest Soil	AQSTAHHHHEGRSVWVLTAYGISGLVLFGVLAYYFSQYIAN*
Ga0126381_1005892842	3300010376	Tropical Forest Soil	MTRKKEGRGAWVLTAYGISGLALFGVLAYFLADFISH*
Ga0126381_1028295261	3300010376	Tropical Forest Soil	KKHEGRGAWVLTAYGISGLALFGVLAYFFSDFIAH*
Ga0136449_1029845871	3300010379	Peatlands Soil	EQSSATTKHHEGRGAWVLTCYGICGLALFGVLAYFFSEFISH*
Ga0150983_161686991	3300011120	Forest Soil	QPHVHHEGRGAWVLTAYGISGLALFGVLAYFFSDFIAH*
Ga0137393_116770081	3300011271	Vadose Zone Soil	LSQPSSTSVKHHEGRGAWVLTAYGVVGLALFGVLAYFFSDFISH*
Ga0137377_113714061	3300012211	Vadose Zone Soil	RKHEGRGAWVLTCYGISGLALFGVLAYFFSDFISH*
Ga0150985_1201837781	3300012212	Avena Fatua Rhizosphere	PHETHHEGRGTWVLTAYGISGLALFGVLLYFFATYVTH*
Ga0137419_107545291	3300012925	Vadose Zone Soil	KHHEGRGAWVLTAYGISGLALFGILAYFISDFIAH*
Ga0137416_122275403	3300012927	Vadose Zone Soil	VSSSSVSQPSSPSLKHHEGRGAWVLTAYGIVGLALFGVLAYFFSDFISH*
Ga0137410_121294921	3300012944	Vadose Zone Soil	MLRRKEGRGAWVLTAYGISGLALFGVLAYFFSDFISH*
Ga0126369_125257881	3300012971	Tropical Forest Soil	TTSIKREGRGAWVLTAYGLSGLALFGVLAYFFSDFIAH*
Ga0164307_108788481	3300012987	Soil	GQSSTANMKHQHEGRGAWVLTAYGISGLALFGVLAYFFSDFIAH*
Ga0181534_103471632	3300014168	Bog	VRKHEGRGAWVLTAYGISGLALFGVIAYFFSDFISR*
Ga0181531_104322701	3300014169	Bog	SSTTTSAIRKHEGRGAWVLTAYGISGLALFGVLAYFFSDFISH*
Ga0157379_101980891	3300014968	Switchgrass Rhizosphere	THHEGRGTWVLTAYGISGLALFGILLYFFSTYVTH*
Ga0182040_111837692	3300016387	Soil	STSTTTMKHHEGRGAWVLTCYSICGLALFGVLAYFFSDFISH
Ga0182037_107044021	3300016404	Soil	TTTMKHHEGRGAWVLTCYSICGLALFGVLAYFFSDFISH
Ga0187824_103744981	3300017927	Freshwater Sediment	SSTYTKHYEKRGTWVLTAYGISGLALFGVLTYFFSDFIAH
Ga0187806_13614611	3300017928	Freshwater Sediment	AEQSATVATKQYEGRGAWVLTAYGICGLTLFGVLAYFFSDFIAH
Ga0187803_100115821	3300017934	Freshwater Sediment	PTVQSSASTKQHEGRGAWVLTAYGICGLALFGVLAYFFSNFISH
Ga0187854_101923502	3300017938	Peatland	SSSQAAGSRHHEGRGAWVLTAYGISGLALFGLLAYFFSDFIAH
Ga0187819_106077111	3300017943	Freshwater Sediment	SAIRRREGRGAWVLTAYGISGLALLGVLAYFFSDFIAR
Ga0187817_108351951	3300017955	Freshwater Sediment	SATTRQHEGRGAWVLTCYGICGLALFGVFAYFFAEYFAH
Ga0187776_114122611	3300017966	Tropical Peatland	SSTSTTTTSALKRHEGRGAWVLTCYAVCGLAMFGAIAYFISDFLSH
Ga0187781_100227613	3300017972	Tropical Peatland	MTSSALRRKEGRGAWVLTAYGISGLALFGVLAYFFSDYIAH
Ga0187805_100091774	3300018007	Freshwater Sediment	MRRHEGRGAWVLTAYGISGLALFGVLAYFFSDFIAH
Ga0187805_101018432	3300018007	Freshwater Sediment	MSAIRRREGRGAWVLTAYGISGLALFGVLAYFFSDFIAR
Ga0187890_104622712	3300018044	Peatland	VSQPTTTGKHHEGRGAWVLTAYGISGLALFGVLAYFFSDFIAH
Ga0187784_103555412	3300018062	Tropical Peatland	RRKEGRGAWVLTAYGISGLALFGLLAYFFSEYIAH
Ga0187772_103415921	3300018085	Tropical Peatland	TASIKRHEGRGAWVLTAYGITGLALFGVLAYFFSDFISH
Ga0187771_104624212	3300018088	Tropical Peatland	MPREGRGVWVLTAYGISGLVLFGILLYYFSTYVTH
Ga0187771_109119931	3300018088	Tropical Peatland	MLQQPLSRESAASKHREGRGAWVLTAYGICGLALFGLFAYFFSNYIAH
Ga0187770_112131021	3300018090	Tropical Peatland	TTTSAIRRKEGRGAWVLTAYGICGLALFGVLAYFFSDFISH
Ga0210403_100114075	3300020580	Soil	MRRREGRGAWVLTCYGISGLILFATLAYFFSNFIAH
Ga0210403_106144471	3300020580	Soil	QSLSSSSTAMRRREGRGAWVLTAYGISGLALFGLLAYFFSDFIAH
Ga0210399_115449711	3300020581	Soil	LSQPAGRRFAGRGAWVLTAYGISGLALFGLLAYFFSDFIAH
Ga0215015_101917252	3300021046	Soil	SQPSSTSVKHHEGRGAWVLTAYGIVGLALFGVLAYFFSDFISH
Ga0210406_110911842	3300021168	Soil	IDQSSSTTTTSAVRKHEGRGAWVLTCYGICGLALFGVLAYFFSDFISH
Ga0210396_100824901	3300021180	Soil	SAIRQREGRGAWVLTAYGVSGLALFGVLAYFFSDFISH
Ga0210388_109616452	3300021181	Soil	TAAAGKHREGRGAWVLTAYGVSGLALFGVLAYFFSDFIAH
Ga0210388_110309581	3300021181	Soil	STTTSAIKHEGRGAWVLTAYGLSGLALFGVLAYFFSDFISH
Ga0210393_110219791	3300021401	Soil	GTHREGRGAWVLTAYGISGLALFGVLAYFFSDFIAH
Ga0210385_100016887	3300021402	Soil	MGSKHREGRGAWVLTAYGISGLILFGILAYFFSDFVAH
Ga0210385_114344291	3300021402	Soil	QQSVSQQSVSSRQREGRGAWVLTAYGVSGLAVIALLAYFFSDFIVH
Ga0210397_106845743	3300021403	Soil	TKHHEGRGAWVLTAYGISGLALFGVLAYFISDFVAH
Ga0210389_102309842	3300021404	Soil	EQSSTTTSAIRKHEGRGAWVLTAYGISGLALFGVLAYFFSDFIAH
Ga0210384_111807221	3300021432	Soil	QSPQQATGKHREGRGAWVLTAYGISGLALFGVLAYFFSDFIAH
Ga0210391_100467151	3300021433	Soil	MRHHEGRGAWVLTAYGICGLALFGVLAYFFSDFIAH
Ga0210390_106566331	3300021474	Soil	STASRHREGRGAWVLTAYGISGLALFGILAYFFSDFIAH
Ga0210390_106711221	3300021474	Soil	SQPHVHHEGRGAWVLTAYGISGLALFGVLAYFFSDFIAH
Ga0210392_102766811	3300021475	Soil	SSTTTSAIRKHEGRGAWVLTAYGISGLALFGVLAYFFSDFIAH
Ga0210392_104029132	3300021475	Soil	PGRHFEGRGAWVLTCYGISGLILFAILAYFFSDFIAH
Ga0212123_100781443	3300022557	Iron-Sulfur Acid Spring	MRKHEGRGAWVLTAYGISGLALFGVIAYFVSDFISH
Ga0228598_10098693	3300024227	Rhizosphere	QSLSQASTTRQFEGRGAWVLTAYGISGLALFAILAYFFSDFIAH
Ga0224556_11088951	3300024295	Soil	SVRKHEGRGAWVLTAYGISGLALFGVIAYFFSDFISR
Ga0208194_10018885	3300025412	Peatland	MSGRHHEGRGAWVLTAYGISGLALFGILAYFFSDFIAH
Ga0207692_105615572	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	QSSATTTSIKKHEGRGAWVLTAYGISGLALFGVIAYFFSDFIAH
Ga0207710_106156811	3300025900	Switchgrass Rhizosphere	TPQAHPHETHHEGRGAWVLTAYGISGLALFGVLLYFFSTYVTN
Ga0207699_101357513	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	STTTTSIRKREGRGAWVLTCYGISGLALFGVLAYFFSDFIAH
Ga0257181_10349921	3300026499	Soil	SSPSVKHHEGRGAWVLTAYGIVGLALFGVLAYFFSDFISH
Ga0209214_10392212	3300027071	Forest Soil	VSQQTAAKHYEGRGTWVLTGYCISGLALFGILAYFISQFLSH
Ga0209525_10647152	3300027575	Forest Soil	SVQPSTAGRHREGRGAWVLTAYGISGLALFGILAYFFSDFIAH
Ga0209527_10211721	3300027583	Forest Soil	EQSSTSTSITRQHEGRGAWVLTAYGISGLALFGVLAYFFSDFISH
Ga0209076_12090361	3300027643	Vadose Zone Soil	SAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSR
Ga0209420_11547592	3300027648	Forest Soil	SISQQSISQSALTRQREGRGAWVLTAYGISGLAVFAVLAYFFSDFIAR
Ga0209580_100868791	3300027842	Surface Soil	HPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH
Ga0209167_100533983	3300027867	Surface Soil	SMSSSGLRRHEGRGAWVFTAYGICGLALFGVLAYFFSDFIAR
Ga0209169_100850373	3300027879	Soil	STTTSAIRQHEGRGAWVLTCYGICGLGLFGVLAYFVSDFIAH
Ga0209380_108730532	3300027889	Soil	SQQSLSSRQREGRGAWVLTAYGVSGLAVVALLAYFFSDFIAH
Ga0209624_100015118	3300027895	Forest Soil	MKHREGRGAWVLTAYGISGLALFGVLAYFFSDFIAH
Ga0209067_107102711	3300027898	Watersheds	STTTSAIKHEGRGAWVLTAYGLSGLALFGVLAYFFSDFIAH
Ga0209415_101495201	3300027905	Peatlands Soil	EQSSATTKHHEGRGAWVLTCYGICGLALFGVLAYFFSEFISH
Ga0209006_1000036233	3300027908	Forest Soil	MQHEGRGAWVLTAYGISGLALFGVIAYFFSDFISR
Ga0302154_101787431	3300028882	Bog	SQQSISQSALTRQREGRGAWVLTAYGISGLALFAVLAYFFSDFIAR
Ga0308309_111840522	3300028906	Soil	EQSSTTTTSQHEGRGAWVLTCYGICGLAMFGVLAYFFSDFIAH
Ga0311329_101754571	3300029907	Bog	RQREGRGAWVLTAYGISGLALFAVLAYFFSDFIAR
Ga0311369_106046051	3300029910	Palsa	QQSVSGRQREGRGAWVLTAYGISGLALFALLAYFFSDFIAH
Ga0311352_111652392	3300029944	Palsa	SVSQQSITQQSVSGRQREGRGAWVLTAYGISGLALFALLAYFFSDFIAH
Ga0311339_103769591	3300029999	Palsa	AHHEGRGAWVLTAYGISGLALFGVIAYFFSDFISR
Ga0311339_113663402	3300029999	Palsa	ESFPTPSTTVKHHEGRGAWVLTAYGISGLALFGILAYYFSDFIAH
Ga0311338_105860752	3300030007	Palsa	SQRPISQQSVSSRQREGRGAWVLTAYGVSGLAVIALLAYFFSDFIAH
Ga0311338_107863052	3300030007	Palsa	TTAHHEGRGAWVLTAYGISGLALFGVIAYFFSDFISR
Ga0311353_100255437	3300030399	Palsa	QSLSQSSASKRFAGRGAWVLTAYGICGLALFGVLAYFFSDFIAH
Ga0302183_102811621	3300030509	Palsa	QQSVSSRQREGRGAWVLTAYGISGLALFALLAYFFSDFIAH
Ga0311355_114586571	3300030580	Palsa	SRQREGRGAWVLTAYGVSGLAVIALLAYFFSDFIAH
Ga0210278_12032521	3300030596	Soil	TRHFEGRGAWVLTAYGVSGLALFGVLAYFFSDFISH
Ga0302313_100816112	3300030693	Palsa	TPSTSGRQREGRGAWVLTAYGISGLALFGILAYYFSDFIAH
Ga0265461_129739071	3300030743	Soil	RRFAGRGAWVLTAYGISGLALFGLLAYFFSDFIAH
Ga0170824_1051557141	3300031231	Forest Soil	AIRQHEGRGAWVLTCYGICGLALFGVLAYFFSDFISH
Ga0302320_119789931	3300031524	Bog	SSATRHIAGRGAWVLTAYSISGLALFGLLAYFFSDFIAH
Ga0318560_106950431	3300031682	Soil	TSTTTMKHHEGRGAWVLTCYSICGLALFGVLAYFFSDFISH
Ga0310686_1004290472	3300031708	Soil	MGGKHREGRGAWVLTAYGISGLILFGILAYFFSDFVAH
Ga0307476_102952731	3300031715	Hardwood Forest Soil	MRRYEGRGAWVLTAYGISGLALFGVLAYFFSDFVAH
Ga0306917_110789141	3300031719	Soil	HPREGRNFWVLTAYGISGLVLFGILAYYFSDFISH
Ga0307477_104624831	3300031753	Hardwood Forest Soil	SVKHHEGRGAWVLTAYGIVGLALFGVLAYFFSDFISH
Ga0307475_101993581	3300031754	Hardwood Forest Soil	TALHRKHEGRGAWVLTAYGISGLVLFGVLAYFFSDFIAH
Ga0307478_117096041	3300031823	Hardwood Forest Soil	QSSTSTSATRHHEGRGAWVLTAYGICGLALFGVLAYFFSDFIAH
Ga0306921_118545761	3300031912	Soil	SHPHEGRSFWVLTAYGISGLVLFGILAYYFSDFISH
Ga0307479_112896861	3300031962	Hardwood Forest Soil	SSQSSGGRRFAGRGAWVLTAYGISGLAVFGLLAYFFSDFIAH
Ga0311301_107231081	3300032160	Peatlands Soil	SSTTTTSAIRKHEGRGAWVLTAYGISGLALFGVLAYFFSDFIAH
Ga0307470_104966172	3300032174	Hardwood Forest Soil	MRRYEGRGAWVLTAYGISGLALFGVLAYFFSDFIAH
Ga0307471_1009435742	3300032180	Hardwood Forest Soil	QSTGTKSHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH
Ga0335078_100954996	3300032805	Soil	RRHEGRGAWVLTCYGICGLAMFGAIAYFISDSLSH
Ga0335078_115553741	3300032805	Soil	TREIHREGRATWVLTAYGISGLALFGVLLYYFSTYVTH
Ga0335080_104364023	3300032828	Soil	TTSAIRKHEGRGAWVLTAYGISGLALFGLLAYFFSDFIAH
Ga0335083_101186982	3300032954	Soil	MIRHKEGRGAWVLTCYGICGLALFGVLAYFFSDFIAH
Ga0335084_114518731	3300033004	Soil	SSTTTTSIKQREGRGAWVLTAYGISGLALFGVLAYFFSDFIAH
Ga0335077_102569022	3300033158	Soil	MHHEGRGTWVLTAYGIAGLALFGVLLYFFSTYVTH
Ga0370515_0016254_1130_1243	3300034163	Untreated Peat Soil	MIRKHEGRGAWVLTAYGISGLALFGVLAYFFSDFIAH

Hidden Markov Model


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