NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F052184

Metagenome Family F052184

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F052184
Family Type Metagenome
Number of Sequences 143
Average Sequence Length 54 residues
Representative Sequence RFRVTSISEKELVVVDTSLKIKHILPMTEGDKTAGGPLARPTPRVDSEDDEP
Number of Associated Samples 114
Number of Associated Scaffolds 143

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 95.80 %
Associated GOLD sequencing projects 100
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.301 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(8.392 % of family members)
Environment Ontology (ENVO) Unclassified
(47.552 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(65.734 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 5.00%    β-sheet: 21.25%    Coil/Unstructured: 73.75%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 143 Family Scaffolds
PF00588SpoU_methylase 4.20
PF03144GTP_EFTU_D2 1.40
PF00009GTP_EFTU 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 143 Family Scaffolds
COG0219tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domainTranslation, ribosomal structure and biogenesis [J] 4.20
COG0565tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferaseTranslation, ribosomal structure and biogenesis [J] 4.20
COG0566tRNA G18 (ribose-2'-O)-methylase SpoUTranslation, ribosomal structure and biogenesis [J] 4.20

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.30 %
UnclassifiedrootN/A0.70 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001431|F14TB_102872534All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300002120|C687J26616_10167737All Organisms → cellular organisms → Bacteria → Acidobacteria685Open in IMG/M
3300002128|JGI24036J26619_10060271All Organisms → cellular organisms → Bacteria → Acidobacteria747Open in IMG/M
3300003996|Ga0055467_10248113All Organisms → cellular organisms → Bacteria → Acidobacteria560Open in IMG/M
3300004156|Ga0062589_100376257All Organisms → cellular organisms → Bacteria → Acidobacteria1141Open in IMG/M
3300004156|Ga0062589_101347963All Organisms → cellular organisms → Bacteria → Acidobacteria692Open in IMG/M
3300004479|Ga0062595_100628981All Organisms → cellular organisms → Bacteria → Acidobacteria844Open in IMG/M
3300004479|Ga0062595_102290195All Organisms → cellular organisms → Bacteria → Acidobacteria532Open in IMG/M
3300004643|Ga0062591_102673009All Organisms → cellular organisms → Bacteria → Acidobacteria527Open in IMG/M
3300005294|Ga0065705_10042153All Organisms → cellular organisms → Bacteria → Acidobacteria1092Open in IMG/M
3300005294|Ga0065705_10195187All Organisms → cellular organisms → Bacteria1448Open in IMG/M
3300005328|Ga0070676_10126748All Organisms → cellular organisms → Bacteria1609Open in IMG/M
3300005329|Ga0070683_101429207All Organisms → cellular organisms → Bacteria → Acidobacteria665Open in IMG/M
3300005332|Ga0066388_102894467All Organisms → cellular organisms → Bacteria → Acidobacteria877Open in IMG/M
3300005332|Ga0066388_103458927All Organisms → cellular organisms → Bacteria → Acidobacteria806Open in IMG/M
3300005334|Ga0068869_101405711All Organisms → cellular organisms → Bacteria → Acidobacteria618Open in IMG/M
3300005334|Ga0068869_101497845All Organisms → cellular organisms → Bacteria → Acidobacteria599Open in IMG/M
3300005336|Ga0070680_101455790All Organisms → cellular organisms → Bacteria → Acidobacteria593Open in IMG/M
3300005338|Ga0068868_102428489All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300005354|Ga0070675_101866530All Organisms → cellular organisms → Bacteria → Acidobacteria554Open in IMG/M
3300005364|Ga0070673_102114596All Organisms → cellular organisms → Bacteria → Acidobacteria535Open in IMG/M
3300005367|Ga0070667_102123398All Organisms → cellular organisms → Bacteria → Acidobacteria529Open in IMG/M
3300005444|Ga0070694_100167415All Organisms → cellular organisms → Bacteria → Acidobacteria1617Open in IMG/M
3300005447|Ga0066689_10929840All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300005457|Ga0070662_100796021All Organisms → cellular organisms → Bacteria → Acidobacteria803Open in IMG/M
3300005459|Ga0068867_101018884All Organisms → cellular organisms → Bacteria → Acidobacteria752Open in IMG/M
3300005467|Ga0070706_100576978All Organisms → cellular organisms → Bacteria → Acidobacteria1046Open in IMG/M
3300005467|Ga0070706_101550875All Organisms → cellular organisms → Bacteria → Acidobacteria605Open in IMG/M
3300005468|Ga0070707_101729854All Organisms → cellular organisms → Bacteria → Acidobacteria592Open in IMG/M
3300005549|Ga0070704_100855153All Organisms → cellular organisms → Bacteria → Acidobacteria816Open in IMG/M
3300005549|Ga0070704_100948558All Organisms → cellular organisms → Bacteria → Acidobacteria776Open in IMG/M
3300005577|Ga0068857_100491788All Organisms → cellular organisms → Bacteria → Acidobacteria1150Open in IMG/M
3300005577|Ga0068857_100677967All Organisms → cellular organisms → Bacteria → Acidobacteria978Open in IMG/M
3300005577|Ga0068857_101647094All Organisms → cellular organisms → Bacteria → Acidobacteria627Open in IMG/M
3300005578|Ga0068854_102073538All Organisms → cellular organisms → Bacteria → Acidobacteria525Open in IMG/M
3300005617|Ga0068859_101331461All Organisms → cellular organisms → Bacteria → Acidobacteria792Open in IMG/M
3300005617|Ga0068859_102236432All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300005618|Ga0068864_100469194All Organisms → cellular organisms → Bacteria → Acidobacteria1206Open in IMG/M
3300005618|Ga0068864_100487679All Organisms → cellular organisms → Bacteria → Acidobacteria1184Open in IMG/M
3300005719|Ga0068861_100941995All Organisms → cellular organisms → Bacteria → Acidobacteria821Open in IMG/M
3300005840|Ga0068870_10858298All Organisms → cellular organisms → Bacteria → Acidobacteria638Open in IMG/M
3300005840|Ga0068870_11060461All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300006169|Ga0082029_1301627All Organisms → cellular organisms → Bacteria → Acidobacteria558Open in IMG/M
3300006852|Ga0075433_10426217All Organisms → cellular organisms → Bacteria → Acidobacteria1170Open in IMG/M
3300006852|Ga0075433_11189272All Organisms → cellular organisms → Bacteria → Acidobacteria662Open in IMG/M
3300006852|Ga0075433_11282185All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300006876|Ga0079217_10925479All Organisms → cellular organisms → Bacteria → Acidobacteria626Open in IMG/M
3300006894|Ga0079215_11657988All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300009090|Ga0099827_10406691All Organisms → cellular organisms → Bacteria → Acidobacteria1164Open in IMG/M
3300009094|Ga0111539_10254759All Organisms → cellular organisms → Bacteria2044Open in IMG/M
3300009094|Ga0111539_12188603All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300009094|Ga0111539_12947283All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300009098|Ga0105245_11628123All Organisms → cellular organisms → Bacteria → Acidobacteria697Open in IMG/M
3300009101|Ga0105247_11018434All Organisms → cellular organisms → Bacteria → Acidobacteria648Open in IMG/M
3300009143|Ga0099792_10754420All Organisms → cellular organisms → Bacteria → Acidobacteria634Open in IMG/M
3300009147|Ga0114129_11795373All Organisms → cellular organisms → Bacteria → Acidobacteria746Open in IMG/M
3300009147|Ga0114129_12803689Not Available579Open in IMG/M
3300009148|Ga0105243_11386860All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes723Open in IMG/M
3300009174|Ga0105241_10389707All Organisms → cellular organisms → Bacteria → Acidobacteria1219Open in IMG/M
3300009174|Ga0105241_10853420All Organisms → cellular organisms → Bacteria → Acidobacteria842Open in IMG/M
3300009174|Ga0105241_11943487All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes578Open in IMG/M
3300009177|Ga0105248_12970034All Organisms → cellular organisms → Bacteria → Acidobacteria540Open in IMG/M
3300009551|Ga0105238_10349366All Organisms → cellular organisms → Bacteria → Acidobacteria1468Open in IMG/M
3300009553|Ga0105249_12757131All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300009610|Ga0105340_1533534All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300009789|Ga0126307_10736370All Organisms → cellular organisms → Bacteria → Acidobacteria795Open in IMG/M
3300009840|Ga0126313_11116746All Organisms → cellular organisms → Bacteria → Acidobacteria648Open in IMG/M
3300010040|Ga0126308_10474077All Organisms → cellular organisms → Bacteria → Acidobacteria843Open in IMG/M
3300010159|Ga0099796_10401197All Organisms → cellular organisms → Bacteria → Acidobacteria601Open in IMG/M
3300010358|Ga0126370_12537160All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300010362|Ga0126377_12814703All Organisms → cellular organisms → Bacteria → Acidobacteria561Open in IMG/M
3300010373|Ga0134128_11635025All Organisms → cellular organisms → Bacteria → Acidobacteria709Open in IMG/M
3300010397|Ga0134124_10293373All Organisms → cellular organisms → Bacteria1513Open in IMG/M
3300010399|Ga0134127_10309391All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1525Open in IMG/M
3300010399|Ga0134127_10408102All Organisms → cellular organisms → Bacteria → Acidobacteria1346Open in IMG/M
3300010399|Ga0134127_12543068All Organisms → cellular organisms → Bacteria → Acidobacteria592Open in IMG/M
3300010400|Ga0134122_11145519All Organisms → cellular organisms → Bacteria → Acidobacteria774Open in IMG/M
3300010400|Ga0134122_11632811All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300010400|Ga0134122_12771817All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300010401|Ga0134121_10352863All Organisms → cellular organisms → Bacteria → Acidobacteria1317Open in IMG/M
3300010403|Ga0134123_13644781All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300011119|Ga0105246_10348258All Organisms → cellular organisms → Bacteria → Acidobacteria1213Open in IMG/M
3300011119|Ga0105246_10705533All Organisms → cellular organisms → Bacteria → Acidobacteria885Open in IMG/M
3300011270|Ga0137391_11116239All Organisms → cellular organisms → Bacteria → Acidobacteria636Open in IMG/M
3300012092|Ga0136621_1112925All Organisms → cellular organisms → Bacteria → Acidobacteria1100Open in IMG/M
3300012093|Ga0136632_10430401All Organisms → cellular organisms → Bacteria → Acidobacteria592Open in IMG/M
3300012198|Ga0137364_11233837All Organisms → cellular organisms → Bacteria → Acidobacteria559Open in IMG/M
3300012203|Ga0137399_10131363All Organisms → cellular organisms → Bacteria → Acidobacteria1979Open in IMG/M
3300012357|Ga0137384_10207764All Organisms → cellular organisms → Bacteria → Acidobacteria1638Open in IMG/M
3300012683|Ga0137398_11271244All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300012930|Ga0137407_11133665All Organisms → cellular organisms → Bacteria → Acidobacteria742Open in IMG/M
3300012930|Ga0137407_11386628All Organisms → cellular organisms → Bacteria → Acidobacteria668Open in IMG/M
3300012984|Ga0164309_10515707All Organisms → cellular organisms → Bacteria → Acidobacteria918Open in IMG/M
3300013100|Ga0157373_10867888All Organisms → cellular organisms → Bacteria → Acidobacteria668Open in IMG/M
3300013308|Ga0157375_13773261All Organisms → cellular organisms → Bacteria → Acidobacteria503Open in IMG/M
3300014745|Ga0157377_10162120All Organisms → cellular organisms → Bacteria → Acidobacteria1392Open in IMG/M
3300015075|Ga0167636_1036643All Organisms → cellular organisms → Bacteria → Acidobacteria589Open in IMG/M
3300015371|Ga0132258_10535694All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia2933Open in IMG/M
3300015372|Ga0132256_102543504All Organisms → cellular organisms → Bacteria → Acidobacteria613Open in IMG/M
3300015373|Ga0132257_104437721All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300015374|Ga0132255_105893552All Organisms → cellular organisms → Bacteria → Acidobacteria518Open in IMG/M
3300018027|Ga0184605_10038072All Organisms → cellular organisms → Bacteria → Acidobacteria2010Open in IMG/M
3300018051|Ga0184620_10140633All Organisms → cellular organisms → Bacteria → Acidobacteria775Open in IMG/M
3300018079|Ga0184627_10026427All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia2896Open in IMG/M
3300018084|Ga0184629_10557973All Organisms → cellular organisms → Bacteria → Acidobacteria589Open in IMG/M
3300018469|Ga0190270_12453986All Organisms → cellular organisms → Bacteria → Acidobacteria583Open in IMG/M
3300018476|Ga0190274_11119640All Organisms → cellular organisms → Bacteria → Acidobacteria868Open in IMG/M
3300019377|Ga0190264_11823252All Organisms → cellular organisms → Bacteria → Acidobacteria548Open in IMG/M
3300019487|Ga0187893_10080045All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia3016Open in IMG/M
3300019767|Ga0190267_11188747All Organisms → cellular organisms → Bacteria → Acidobacteria557Open in IMG/M
3300019883|Ga0193725_1029379All Organisms → cellular organisms → Bacteria → Acidobacteria1472Open in IMG/M
3300021445|Ga0182009_10272975All Organisms → cellular organisms → Bacteria → Acidobacteria845Open in IMG/M
3300022694|Ga0222623_10087431All Organisms → cellular organisms → Bacteria → Acidobacteria1210Open in IMG/M
3300025327|Ga0209751_11098088All Organisms → cellular organisms → Bacteria → Acidobacteria592Open in IMG/M
3300025885|Ga0207653_10240082All Organisms → cellular organisms → Bacteria → Acidobacteria692Open in IMG/M
3300025907|Ga0207645_11151399All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300025908|Ga0207643_10727463All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300025910|Ga0207684_11209541All Organisms → cellular organisms → Bacteria → Acidobacteria625Open in IMG/M
3300025911|Ga0207654_10674484All Organisms → cellular organisms → Bacteria → Acidobacteria741Open in IMG/M
3300025911|Ga0207654_10914030All Organisms → cellular organisms → Bacteria → Acidobacteria636Open in IMG/M
3300025913|Ga0207695_11435994All Organisms → cellular organisms → Bacteria → Acidobacteria570Open in IMG/M
3300025918|Ga0207662_11066951All Organisms → cellular organisms → Bacteria → Acidobacteria574Open in IMG/M
3300025920|Ga0207649_11165545All Organisms → cellular organisms → Bacteria → Acidobacteria609Open in IMG/M
3300025922|Ga0207646_10391295All Organisms → cellular organisms → Bacteria → Acidobacteria1256Open in IMG/M
3300025924|Ga0207694_10009432All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes7357Open in IMG/M
3300025933|Ga0207706_10796936All Organisms → cellular organisms → Bacteria → Acidobacteria803Open in IMG/M
3300025941|Ga0207711_12121141All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300025960|Ga0207651_10335132All Organisms → cellular organisms → Bacteria → Acidobacteria1269Open in IMG/M
3300025960|Ga0207651_10353429All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1238Open in IMG/M
3300026023|Ga0207677_11698007All Organisms → cellular organisms → Bacteria → Acidobacteria585Open in IMG/M
3300026095|Ga0207676_11774989All Organisms → cellular organisms → Bacteria → Acidobacteria615Open in IMG/M
3300026116|Ga0207674_10453358All Organisms → cellular organisms → Bacteria → Acidobacteria1240Open in IMG/M
3300026116|Ga0207674_10919713All Organisms → cellular organisms → Bacteria → Acidobacteria843Open in IMG/M
3300027907|Ga0207428_10277723All Organisms → cellular organisms → Bacteria → Acidobacteria1244Open in IMG/M
3300028536|Ga0137415_10910610All Organisms → cellular organisms → Bacteria → Acidobacteria690Open in IMG/M
3300028536|Ga0137415_11264233All Organisms → cellular organisms → Bacteria → Acidobacteria555Open in IMG/M
3300028814|Ga0307302_10566309All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300028889|Ga0247827_11102931All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300031366|Ga0307506_10276102All Organisms → cellular organisms → Bacteria → Acidobacteria649Open in IMG/M
3300031720|Ga0307469_12344163All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300031908|Ga0310900_11694295All Organisms → cellular organisms → Bacteria → Acidobacteria536Open in IMG/M
3300032000|Ga0310903_10660810All Organisms → cellular organisms → Bacteria → Acidobacteria561Open in IMG/M
3300032180|Ga0307471_101554556All Organisms → cellular organisms → Bacteria → Acidobacteria819Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.39%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.29%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.29%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil6.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.59%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere5.59%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.20%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.50%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.80%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.10%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.10%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.10%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.10%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand1.40%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.40%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.40%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.40%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.40%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.40%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.40%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.40%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.40%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.70%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.70%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.70%
Glacier Forefield SoilsEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soils0.70%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.70%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.70%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.70%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.70%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.70%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.70%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002120Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2EnvironmentalOpen in IMG/M
3300002128Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5EnvironmentalOpen in IMG/M
3300003996Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012092Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)EnvironmentalOpen in IMG/M
3300012093Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015075Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5C, Northern proglacial tributary margin, adjacent to top of river)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TB_10287253423300001431SoilSGRFRVTSISEKELVLTDTNLKIKHTIAMSETDKSAGPLSRPTPRVDAEDDEP*
C687J26616_1016773713300002120SoilVISISEKELVLTDTNLKIKHTLPITSEADRGYSPVQRPTPRPESDDDEP*
JGI24036J26619_1006027123300002128Corn, Switchgrass And Miscanthus RhizosphereFRVTSISDKEIVFVDTNLKIKHSLAMTEGERTAGSPIARPTPRVDSEDDEP*
Ga0055467_1024811313300003996Natural And Restored WetlandsVTSISEKELVMVDTSLKIKHTLTMAEGDSRGAGGPLARPTPRVDAEDDEP*
Ga0062589_10037625713300004156SoilGRFRVTSISEKELVLVDTNLKIKHTLAFSVSGDKGAPMQRPTPRTDSDDDQP*
Ga0062589_10134796323300004156SoilEIVFIDSNLKIKHALAMTNQGDKNNPNQRPTPKVDSEDDEP*
Ga0062595_10062898113300004479SoilVTSISEKELVVVDTSLKIKHILPMTEGDKTSGPLTRPTPRVDSEDDEP*
Ga0062595_10229019523300004479SoilFRVTSISEKELVMMDTTLKIKHTLAMTEGDKSLSNPLTRPTPRVESEDDEP*
Ga0062591_10267300923300004643SoilRFRMTSISEKEVVLVDVNLKIKHTLPFSTDRDRGSSPLSRPTPRVEAEDDEP*
Ga0065705_1004215323300005294Switchgrass RhizosphereGRFRVTSISEKEVVVVDSNLKIKHSLSMTTQGDRSNPLQRPTPRVDSEDDEP*
Ga0065705_1019518713300005294Switchgrass RhizosphereISDKELVLMDATLKIQHKLTMTEGDKGVGSPLTRPTPRVDSEDDEP*
Ga0070676_1012674833300005328Miscanthus RhizosphereVQRGDLLSNRFRVTSISEKELVLLDATLKIQHKITMSEGDKSLGSPLTRPTPRVDAEDDEP*
Ga0070683_10142920723300005329Corn RhizosphereNKEILSVQLGDLLSGRFRVTSISDKEIVFVDTNLKIKHTLAMTEGERTASAPTARPTPRVDAEDDEPQL*
Ga0066388_10289446713300005332Tropical Forest SoilQRGDVLSGRFRVTSISEKELVLTDTSLKVKHSLAMVTESERGLGPLARPTPKVDAEDDEPQ*
Ga0066388_10345892723300005332Tropical Forest SoilLLGNRFRVTSISEKELVLLDANLKIQHKLAMTEGDKSLGSPLARPTPRVDAEDDEP*
Ga0068869_10140571123300005334Miscanthus RhizosphereISEKELVVMDATLKITHKLTMSEGDKSLGSPLARPTPRVDSEDDEP*
Ga0068869_10149784513300005334Miscanthus RhizosphereIVFIDSNLKIKHALAMTNQGDKNNPNQRPTPKVDSEDDEP*
Ga0070680_10145579023300005336Corn RhizosphereSISEKEVVVVDSNLKIKHSLSMTTQGDRSNPLQRPTPKVDSEDDEP*
Ga0068868_10242848923300005338Miscanthus RhizosphereVTSISEKELVVVDTSLKIKHILPMTEGDKTAGGPLSRPTPRVDSEDDEP*
Ga0070675_10186653023300005354Miscanthus RhizosphereTSISEKEIVFVDTSLKIKHSLAMTESDKNQTSPLNRPTPKVDAEDDEP*
Ga0070673_10211459613300005364Switchgrass RhizosphereGRFRVTSISEKELVLVDTSLKIKHVLPKTEGDKTAGPMSRPTPRVDSEDDEP*
Ga0070667_10212339813300005367Switchgrass RhizosphereGDVLGGRFRVTSITEKELVLTDTSLKIKHSIPMSEGDKTAGGPLSRPTPPVDAEDDEP*
Ga0070694_10016741533300005444Corn, Switchgrass And Miscanthus RhizosphereGDLLSGRFRVTSISDKEIVFVDTNLKIKHSLAMTEGERTAGSPIARPTPRVDSEDDEP*
Ga0066689_1092984023300005447SoilILIDNNLKIRHTLAFTSPSDRGNPLQRPTPRVEGEDDEL*
Ga0070662_10079602113300005457Corn RhizosphereVTSISEKEIVFVDTSLKIKHSLAMTESDKNQTSPLNRPTPKVDAEDDEP*
Ga0068867_10101888423300005459Miscanthus RhizosphereLLGGRFRVTSISEKELVLVDTNLKIKHALPFSVSGEKGNPMQRPTPRVSSDDDEP*
Ga0070706_10057697823300005467Corn, Switchgrass And Miscanthus RhizosphereDVRRGDLLSGRFRVTSISEKELVLVDTNLKIKHTIPFTYDGEKGIGPLRHPTPKVDSEDDEP*
Ga0070706_10155087523300005467Corn, Switchgrass And Miscanthus RhizosphereDVRRGDLLSGRFRVTSISEKELVLVDTNLKIKHTLPFTNDGEKGIGPLSRPTPKADSEDDEP*
Ga0070707_10172985423300005468Corn, Switchgrass And Miscanthus RhizosphereRGDLLSGRFRVTSISEKEVVFMDANLKIKHTLAMTEGERVSGAPLGRPTPRVDSEDDEP*
Ga0070704_10085515313300005549Corn, Switchgrass And Miscanthus RhizosphereFRVTSISEKEVVVVDSNLKIKHSLGMTTQGDKSNPLQRPTPRVDSEDDEP*
Ga0070704_10094855813300005549Corn, Switchgrass And Miscanthus RhizosphereLAGRFRVTSISEKELVLVDANLKIKHTLPFSVSGDKGNPMQRPTPRPDSDDDQP*
Ga0068857_10049178813300005577Corn RhizosphereEVVVVDSNLKIKHSLSMTTQGDRSNPLQRPTPKVDSEDDEP*
Ga0068857_10067796723300005577Corn RhizosphereGGRFRLTSIADKEIVFTDTNLKLTHKIKMTEGEKGFGSPLSRPTPRVDAEDDEPLN*
Ga0068857_10164709413300005577Corn RhizosphereDVIGGRFRVTSISEKELVVVDTSLKIKHILPMTEGDKTAGGPLARPTPRVDSEDDEP*
Ga0068854_10207353813300005578Corn RhizosphereVYRGDVIGGRFRITSISEKELVVVDTSLKIKHVLPMTEGDKSSGALSRPTPRVDSEDDEP
Ga0068859_10133146123300005617Switchgrass RhizosphereVTSISQKELVLTDTSLKIKHTIAMSESDKGAGPLSRPTPRVDSEDDEP*
Ga0068859_10223643223300005617Switchgrass RhizosphereEVVVLDNNLKIKHTIAMTAQGDRGNPLQRPTPRVDSEDDEP*
Ga0068864_10046919413300005618Switchgrass RhizosphereGGRFRVTSISQKELVLTDTSLKIKHTIAMSESDKGTGPLSRPTPRVDSEDDEP*
Ga0068864_10048767923300005618Switchgrass RhizosphereQLGDLLGGRFRVTSISEKEIVFIDTNLKIKHTLSMTEGERTAGAPSSRPTPRVDAEDDEP
Ga0068861_10094199513300005719Switchgrass RhizosphereGGRFRVTSISEKELVVVDTSLKIKHILPMTEGDKTAGGPLARPTPRVDSEDDEP*
Ga0068870_1085829813300005840Miscanthus RhizosphereFRLTSIADKEIVFTDTNLKLTHKIKMTEGEKGFGSPLSRPTPRVDAEDDEPLN*
Ga0068870_1106046113300005840Miscanthus RhizosphereDVIGGRFRVTSMSQKELVLTDTSLKIKHTIAMTESDKGSGPLSRPTPRVDSEDDEP*
Ga0082029_130162723300006169Termite NestLLGNRFRVTSISDKELVLMDATLKIQHKLTMTEGDKGIGSPLSRPTPRVDAEDDEP*
Ga0075433_1042621713300006852Populus RhizosphereGGRFRVTSISEKELVLVDTSLKIKHIIPMSEGEKGFGPLSRPTPRVDAEDDEP*
Ga0075433_1118927223300006852Populus RhizosphereNVHRGDLLGNRFRVTSISEKEVVLTDTNLKIKHSLAMATDNEKGLGPLARPTPKVDAEDDEP*
Ga0075433_1128218513300006852Populus RhizosphereRVTSISEKELVVVDTSLKIKHVLPMSEGDKSGGPLARPTPRVDSEDDEP*
Ga0079217_1092547923300006876Agricultural SoilGGRFRVTSISDKELVMMDTTLKIKHTLAMSEGDKNVNNPLMRPTPRVEVEDDEP*
Ga0079215_1165798823300006894Agricultural SoilLHESRFSITSISEKQVVVNDVTLKIKHTIPFTAQGDRGSPMQRPTPRIESEDDDP*
Ga0099827_1040669123300009090Vadose Zone SoilGRFRVTSISEKELVLVDTNLKIKHTLAFTTQGEKGNPLQRPTPRVESEDDEP*
Ga0111539_1025475913300009094Populus RhizosphereIGGRFRVTSISDKELVLTDTSLKIKHSLAKTEGDKSTGALSRPTPRVDSEDDEP*
Ga0111539_1218860323300009094Populus RhizosphereFRVTSISEKELVLTDTSLKIKHTLAMTEGDKSNNPLMRPTPRVDSEDDEP*
Ga0111539_1294728313300009094Populus RhizosphereRVTSISEKELVLLDATLKIQHKITMSEGDKSLGSPLTRPTPRVDAEDDEP*
Ga0105245_1162812313300009098Miscanthus RhizosphereDLLGGRRRIKKISEKEVVVVDSNLKVKHSLAMTAQGDRGNPLQRPTPRVDSEDDEP*
Ga0105247_1101843423300009101Switchgrass RhizosphereIGGRFRVTSISEKELVVVDTSLKIKHILPMTEGDKTAGGPLARPTPRVDSEDDEP*
Ga0099792_1075442023300009143Vadose Zone SoilTSISDKELVLVDTNLKIRHNLAMIEGEKGSGPLSRPTPAVVEVDDEP*
Ga0114129_1179537323300009147Populus RhizosphereFRVTSISEKELVLTDTTLKIKHTIAMSEGDKGAAGPLSRPTPRVDAEDDEP*
Ga0114129_1280368923300009147Populus RhizosphereSGRFRVTSISPKELVLIDSTLKIQHKLAMTEGDKGIGGPLARPTPRVDAEDDEP*
Ga0105243_1138686023300009148Miscanthus RhizosphereYRADVIGGRFRVTSISEKELVVVDTSLKIKHILPMTEGDKTGGPLTRPTPRVDSEDDEP*
Ga0105241_1038970713300009174Corn RhizosphereAIVQDKSDKNKIMNVRRGDMLSGRFRVTSISDKELVMMDTNLKITHKLPMTEGDKNFGNPLTRPTPRVESEDDEP*
Ga0105241_1085342013300009174Corn RhizosphereIGGRFRVTSISDKELVLTDTSLKIKHSLAKTEGDKSPGALSRPTPRVDSEDDEP*
Ga0105241_1194348713300009174Corn RhizosphereTVYRGDVIGGRFRVTSISQKELVLTDTSLKIKHTIAMSESDKGSGPLSRPTPRVDAEDDEP*
Ga0105248_1297003413300009177Switchgrass RhizosphereSISEKEVVFLDANLKIKHTLAMTEGEKVSGAPLGRPTPRVDAEDDEP*
Ga0105238_1034936633300009551Corn RhizosphereGDVIGGRFRVTSISEKELVVVDTSLKIKHILPMSEGDKTAGGPLSRPTPRVDSEDDEP*
Ga0105249_1275713123300009553Switchgrass RhizosphereRFRVTSISEKELVLLDATLKIQHKITMSEGDKSLGSPLTRPTPRVDAEDDEP*
Ga0105340_153353413300009610SoilRFRVASISEKEIVFLDTNLKINHRLNMTEGERLPGSPQSRPTPRVDAEDDEP*
Ga0126307_1073637023300009789Serpentine SoilVTSISEKELVVTDTTLKIKHTLAMSEGDNRGAGPLSRPTPRVDAEDDEP*
Ga0126313_1111674613300009840Serpentine SoilGGRFRVTSISEKELVLVDTRLKIKHVLPMTEGDKATGPLSRPTPRVDAEDDEP*
Ga0126308_1047407723300010040Serpentine SoilRVTSISEKELVVVDTSLKIKHILPMTEGDKGSGPLSRPTPRVDSEDDEP*
Ga0099796_1040119723300010159Vadose Zone SoilQRGDVLGGRFRVTSISDKELVLVDTNLKIRHNLAMIEGEKGSGPLSRPTPAVVEVDDEP*
Ga0126370_1253716023300010358Tropical Forest SoilFRVTSISDKELVLTDTSLKIKHTLKMTEGDKAAGPLSRPTPRVDSEDDEP*
Ga0126377_1281470323300010362Tropical Forest SoilIGGRFRVTSISDKELVLMDTSLKIRHTIQMTEGDKNPSNPLTRPTPRVESEDDEP*
Ga0134128_1163502523300010373Terrestrial SoilGRFRVTSISDREVVFVDSNLKIKHNLAMSNQGDRTNPSQRPTPRVDSEDDEP*
Ga0134124_1029337313300010397Terrestrial SoilRGDLLGGRFRVTSISDREVVFVDSNLKIKHNLAMSNQGDRANPGQRPTPRVDSEDDEP*
Ga0134127_1030939133300010399Terrestrial SoilVYRGDVIGGRFRVTSISQKELVLTDTSLKIKHTIAMSESDKGSGPLSRPTPRVDAEDDEP
Ga0134127_1040810233300010399Terrestrial SoilVTSISEKELVLLDATLKIQHKITMSEGDKSLGSPLTRPTPRVDAEDDEP*
Ga0134127_1254306823300010399Terrestrial SoilVTSISEKEVVVVDSNLKVKHSLAMTAQGDRGNPLQRPTPRVDSEDDEP*
Ga0134122_1114551913300010400Terrestrial SoilSVISVQRGDLLSGRFRVTSISTKELVLMDSTLKIQHKLTMSEGDKGLGSPLARPTPRVDAEDDEP*
Ga0134122_1163281113300010400Terrestrial SoilDVVGGRFRVTSISDRELVLVDTSLKIKHSIAMSMEGERASFPQGRPTPRVAAEDDEPQ*
Ga0134122_1277181723300010400Terrestrial SoilVIGGRFRVTSISEKELVVVDTSLKIKHILPMSEGDKTAGGPLSRPTPRVDSEDDEP*
Ga0134121_1035286313300010401Terrestrial SoilEILSVQLGDLLSGRFRVTSISDKEIVFVDTNLKIKHSLAMTEGERTAGSPIARPTPRVDSEDDEP*
Ga0134123_1364478123300010403Terrestrial SoilSISDREVVFVDSNLKIKHNLTMSNQGDRANPSQRPTPRVDSEDDEP*
Ga0105246_1034825813300011119Miscanthus RhizosphereGDLLGGRFRVTSISEKEVVVVDSNLKIKHSLSMTTQGDRSNPLQRPTPKVDSEDDEP*
Ga0105246_1070553313300011119Miscanthus RhizosphereDLLGGRFRVTSISEKEVVVVDSNLKIKHNLSMTTQGDKSNPLQRPTPRVDSEDDEP*
Ga0137391_1111623923300011270Vadose Zone SoilLLGGRFRVTSISEKELILIDNNLKIRHTLAFSNQGDKGNPLQRPTPRVEGEDDEL*
Ga0136621_111292523300012092Polar Desert SandVTSISEKELILVDSNLKIKHTLAFTNLGDRGNPLQRPTPRVEGEDDEL*
Ga0136632_1043040123300012093Polar Desert SandLGGRFRVTSISEKELVVIDNNLKIKHTLPFSVQGGAGGNPLQRPTPKVDSEDDEP*
Ga0137364_1123383723300012198Vadose Zone SoilDLLGGRFRVTSISEKEVVVVDNNLKVKHTLAMTAQGDSGNPQQRPTPRVDSEDDEP*
Ga0137399_1013136313300012203Vadose Zone SoilSISDKELVLVDTNLKIKHNLAMSEGERGSTNPLTRPTPNVDVDDEPGD*
Ga0137384_1020776443300012357Vadose Zone SoilGDVLSGRFRVTSISERELVLVDTNLMIKHTLSLTNEGERGAFPQGRPTPRVAAEDDDP*
Ga0137398_1127124423300012683Vadose Zone SoilLGGRFRVTSISEKELVLVDTNLKIKHSLAMSEGERGAGPLARPTPRVAAEDDEP*
Ga0137407_1113366513300012930Vadose Zone SoilQRGDVLGGRFRVTSISDKELVLVDTNLKIRHNLSMIEGEKGSGALSRPTPAVVEVDDEP*
Ga0137407_1138662813300012930Vadose Zone SoilEVVVVDSNLKIKHSLGMTTQGDRNNPLQRPTPRVDSEDDEP*
Ga0164309_1051570723300012984SoilDLLGGRFRVTSISEKEVVVVDSNLKIKHSLGMTNQGDKSNPLQRPTPKVDSEDDEP*
Ga0157373_1086788813300013100Corn RhizosphereDLLSNRFRVTSISEKELVLLDATLKIQHKITMSEGDKSLGSPLTRPTPRVDAEDDEP*
Ga0157375_1377326123300013308Miscanthus RhizosphereLGGRFRVTSISEKEVVVVDSNLKIKHSLSMTTQGDRSNPLQRPTPKVDSEDDEP*
Ga0157377_1016212033300014745Miscanthus RhizosphereGRFRVTSISEKELVVVDTSLKIKHIIPKSEGDTSLGPLARPTPRVDAEDDEP*
Ga0167636_103664323300015075Glacier Forefield SoilsDLLGGRFRVTSISEKEVVLIDSNLKIKHTLAMTTQGDRGNPLQRPTPKVDSEDDEP*
Ga0132258_1053569413300015371Arabidopsis RhizosphereVLKGDVVGGRFRVTSISDKELVLTDTSLKIKHTLAMSEGDKTAAGLTARPTPRVDAEDDEP*
Ga0132256_10254350413300015372Arabidopsis RhizosphereSISEKELVLTDTSLKIKHTLAMTEGDKTAGGPLSRPTPRVDAEDDEP*
Ga0132257_10443772113300015373Arabidopsis RhizosphereSISDKEIVFVDTNLKIKHSLAMTEGERTAGSPSARPTPRVDSEDDEP*
Ga0132255_10589355223300015374Arabidopsis RhizosphereFRVTSISEKEVVFMDANLKIKHTLAMTEGEKVSGTPLGRPTPRVDAEDDEP*
Ga0184605_1003807243300018027Groundwater SedimentQRGDLLGGRFRVTSISEKELVVIDTNLKIKHSLALSNQGERGNPSQRPTPRVDSEDDEP
Ga0184620_1014063323300018051Groundwater SedimentRGDLLGGRFRVTSISEKEVVVVDSNLKIKHSLAMTTQGDKSNPLQRPTPRVDSEDDEP
Ga0184627_1002642713300018079Groundwater SedimentRGDLLGGRFRVTSISEKEVVVVDNNLKVKHTLAMTTQGDRGNPLQRPTPRVDSEDDEP
Ga0184629_1055797323300018084Groundwater SedimentRFRVTSISEKEVVLVDNNLKIKHTLAMTTQGDRGNPQQRPTPKVDSEDDEP
Ga0190270_1245398613300018469SoilRFRLTSISEKELVLTDTNLKIKHVLPLTTDRDRASSPLARPTPRVEAEDDEP
Ga0190274_1111964013300018476SoilVTSISDKEVVVVDSTLKIKHSLAMTTQGDKSNPLQRPTPRVDSEDDEP
Ga0190264_1182325223300019377SoilVTSISEKELVLIDNNLKIKHTLAYSTQGDKGNPLQRPTPRIESEDDEP
Ga0187893_1008004553300019487Microbial Mat On RocksQRGDVLGGRFRLTSISLIELVFVDTSLRIKHTLPFSTERDRGIGPQSRPTPRVDSEDDEP
Ga0190267_1118874723300019767SoilRFRVTSISEKEVVFVDSNLKIKHNVAMSIQGDRGGPGQRPTPRVDSEDDEP
Ga0193725_102937913300019883SoilEVVVVDSNLKVKHTLAMTTQGDRGNPLQRPTPRVDSEDDEP
Ga0182009_1027297523300021445SoilKNILNVHRGDVIGGRFRVTSIADKELVLMDTNLKIKHTLAMTEGERSATSPLTRPTPRVESEDDEP
Ga0222623_1008743113300022694Groundwater SedimentGRFRVTSISEKELVLVDNNLKIKHTLAFTNQGDRGNPLQRPTPRVESDDDEP
Ga0209751_1109808813300025327SoilSISDKELVVVDTNLKIKHTLAMTTDRDKSSGPLARPTPQVDSDEDDEP
Ga0207653_1024008213300025885Corn, Switchgrass And Miscanthus RhizosphereRGDLLGGRFRVTSISEKEVVVVDSTLKIKHTLAMTTQGDRGNPLQRPTPKVDSEDDEP
Ga0207645_1115139923300025907Miscanthus RhizosphereRFRVTSISQKELVLTDTSLKIKHTIAMSESDKNAGPLSRPTPRVDSEDDEP
Ga0207643_1072746323300025908Miscanthus RhizosphereGRFRLTSIADKEIVFTDTNLKLTHKIKMTEGEKGFGSPLSRPTPRVDAEDDEPLN
Ga0207684_1120954113300025910Corn, Switchgrass And Miscanthus RhizosphereVTSISDKELVLIDTTLKIKHTLAMTEGERNPGNPLTRPTPRVEAEDDEP
Ga0207654_1067448423300025911Corn RhizosphereFRVTSISQKELVLTDTSLKIKHTIAMSESDKGSGPLSRPTPRVDAEDDEP
Ga0207654_1091403013300025911Corn RhizosphereFRVTSISEKELVLLDATLKIQHKITMSEGDKSLGSPLTRPTPRVDAEDDEP
Ga0207695_1143599413300025913Corn RhizosphereIVFIDSNLKIKHALAMTNQGDKNNPNQRPTPKVDSEDDEP
Ga0207662_1106695123300025918Switchgrass RhizosphereILSVHLGDLLGGRFRVTSISEKEIVFVDVNLRIKHPLPMTEGERTAGGPISRPTPRVDAEDDEP
Ga0207649_1116554513300025920Corn RhizosphereISEKEVVVVDSNLKIKHSLSMTTQGDRSNPLQRPTPKVDSEDDEP
Ga0207646_1039129523300025922Corn, Switchgrass And Miscanthus RhizosphereVQRGDLLSGRFRVTSISEKEVVFMDANLKIKHTLAMTEGERVSGAPLGRPTPRVDSEDDE
Ga0207694_1000943293300025924Corn RhizosphereGDVIGGRFRVTSISEKELVVVDTSLKIKHILPMSEGDKTAGGPLSRPTPRVDSEDDEP
Ga0207706_1079693613300025933Corn RhizosphereVTSISEKEIVFVDTSLKIKHSLAMTESDKNQTSPLNRPTPKVDAEDDEP
Ga0207711_1212114113300025941Switchgrass RhizosphereFRVTSISEKELVVVDTSLKIKHILPMSEGDKTPGGPLSRPTPRVDSEDDEP
Ga0207651_1033513213300025960Switchgrass RhizosphereLSVQLGDLLSGRFRVTSISDKEIVFVDTNLKIKHTLAMTEGERTASAPTARPTPRVDAEDDEPQL
Ga0207651_1035342923300025960Switchgrass RhizosphereKGDVIGGRFRVTSISDKELVLTDTSLKIKHSLAMTEGDKSAGALSRPTPRVDAEDDEP
Ga0207677_1169800713300026023Miscanthus RhizosphereRFRVTSISEKELVVVDTSLKIKHILPMTEGDKTAGGPLARPTPRVDSEDDEP
Ga0207676_1177498923300026095Switchgrass RhizosphereVVGGRFRVTSISQKELVLTDTSLKIKHTIAMSESDKGAGPLSRPTPRVDSEDDEP
Ga0207674_1045335813300026116Corn RhizosphereQLGDLLSGRFRVTSISDKEIVFVDTSLKIKHSLAMTEGERTAGSPIARPTPRVDSEDDEP
Ga0207674_1091971313300026116Corn RhizosphereGDVIGGRFRVTSISQKELVLTDTSLKIKHTIAMSESDKGTGPLSRPTPRVDSEDDEP
Ga0207428_1027772333300027907Populus RhizosphereGRFRVTSISDKELVLTDTSLKIKHSLAKTEGDKSTGALSRPTPRVDSEDDEP
Ga0137415_1091061013300028536Vadose Zone SoilRVTSISEKELILVDSNLKIRHTLAFTNQGDRGNPLQRPTPRVEGEDDEL
Ga0137415_1126423313300028536Vadose Zone SoilAVPSIDPATWALTVQRGDLLGGRFRVTSISEKEVVVVDSNLKVKHTLAMTSQGDRGNPLQRPTPKVDSEDDEP
Ga0307302_1056630913300028814SoilDSNLKIKHNIAMSSQGDRGSPGQRPTPRVESEDDEP
Ga0247827_1110293113300028889SoilDKSNRQIMNVHRGDVLSGRFRVTSISDKEMVMMDTTLRIQHRLPMTEGDKNANNPLTRPTPRVESEDDEP
Ga0307506_1027610223300031366SoilLGDLLSGRFRVTSISDKEIVFVDTNLKIKHTLAMTEGERTASGPTARPTPRVDAEDDEPQ
Ga0307469_1234416323300031720Hardwood Forest SoilGDVVGSRFRVTSISEKEVVLIDTSLKIKHTLAMTVQGDRGNPLQRPTPRVESEDDEP
Ga0310900_1169429523300031908SoilEILSVQRGDLLSGRFRVTSISEKEVVFMDANLKIKHTLAMTEGEKVSGSPLGRPTPRVDAEDDEP
Ga0310903_1066081023300032000SoilRFRLTSIADKEIVFTDTNLKLTHKIKMTEGEKGFGSPLSRPTPRVDAEDDEPLN
Ga0307471_10155455613300032180Hardwood Forest SoilTSISEKELVLMDANLKIKHTLAMTEGDKSSSPMSRPTPTVASEDDEP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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