Metagenome / Metatranscriptome Family F052118

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052118
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	64 residues
Representative Sequence	MPPPENWLTKLTKTGVRQPRTHLLWVDARDTPADIEAKRDRMIAAGRARPDDTFVHVRWKRRDET
Number of Associated Samples	106
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.64 %
% of genes near scaffold ends (potentially truncated)	39.16 %
% of genes from short scaffolds (< 2000 bps)	86.01 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.413 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (14.685 % of family members)
Environment Ontology (ENVO)	Unclassified (27.972 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.58% β-sheet: 12.90% Coil/Unstructured: 64.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF01977	UbiD	10.49
PF11533	DUF3225	4.20
PF00355	Rieske	2.80
PF13924	Lipocalin_5	2.80
PF03401	TctC	2.10
PF01522	Polysacc_deac_1	2.10
PF02661	Fic	2.10
PF00005	ABC_tran	2.10
PF00581	Rhodanese	1.40
PF11604	CusF_Ec	1.40
PF12762	DDE_Tnp_IS1595	1.40
PF00950	ABC-3	1.40
PF01297	ZnuA	0.70
PF01557	FAA_hydrolase	0.70
PF02538	Hydantoinase_B	0.70
PF00440	TetR_N	0.70
PF16914	TetR_C_12	0.70
PF02683	DsbD	0.70
PF01479	S4	0.70
PF04828	GFA	0.70
PF00753	Lactamase_B	0.70
PF13417	GST_N_3	0.70
PF03330	DPBB_1	0.70
PF11953	DUF3470	0.70
PF13443	HTH_26	0.70
PF07885	Ion_trans_2	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	10.49
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	2.10
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.10
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.40
COG0609	ABC-type Fe3+-siderophore transport system, permease component	Inorganic ion transport and metabolism [P]	1.40
COG1108	ABC-type Mn2+/Zn2+ transport system, permease component	Inorganic ion transport and metabolism [P]	1.40
COG4606	ABC-type enterochelin transport system, permease component	Inorganic ion transport and metabolism [P]	1.40
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.41 %
Unclassified	root	N/A	12.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.41 %
Unclassified	root	N/A	12.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.41 %
Unclassified	root	N/A	12.59 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	69.93 %
Unclassified	root	N/A	12.59 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	61.54 %
Unclassified	root	N/A	12.59 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.68 %
Unclassified	root	N/A	12.59 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.59 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.70 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.70 %
Pleomorphomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae	0.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.59 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.70 %
Hartmannibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Hartmannibacter	0.70 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.59 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	0.70 %
Hartmannibacter diazotrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Hartmannibacter → Hartmannibacter diazotrophicus	0.70 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.59 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.70 %
Hartmannibacter diazotrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Hartmannibacter → Hartmannibacter diazotrophicus	0.70 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17002662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3542	Open in IMG/M
2124908016\|OU_2_1_1_newblercontig06226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1572	Open in IMG/M
2170459005\|F1BAP7Q01DXVIQ	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10086017	Not Available	784	Open in IMG/M
3300000955\|JGI1027J12803_108360712	Not Available	543	Open in IMG/M
3300002906\|JGI25614J43888_10208530	Not Available	529	Open in IMG/M
3300004633\|Ga0066395_10855314	Not Available	548	Open in IMG/M
3300005166\|Ga0066674_10534020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300005172\|Ga0066683_10056600	All Organisms → cellular organisms → Bacteria	2324	Open in IMG/M
3300005178\|Ga0066688_10329037	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300005187\|Ga0066675_10047824	All Organisms → cellular organisms → Bacteria	2617	Open in IMG/M
3300005332\|Ga0066388_100086424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3537	Open in IMG/M
3300005332\|Ga0066388_100794072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1540	Open in IMG/M
3300005332\|Ga0066388_101135749	All Organisms → cellular organisms → Bacteria → Proteobacteria	1327	Open in IMG/M
3300005332\|Ga0066388_101967770	All Organisms → cellular organisms → Bacteria → Proteobacteria	1046	Open in IMG/M
3300005332\|Ga0066388_103309400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300005332\|Ga0066388_103594291	All Organisms → cellular organisms → Bacteria → Proteobacteria	791	Open in IMG/M
3300005332\|Ga0066388_106239860	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005332\|Ga0066388_106950743	Not Available	569	Open in IMG/M
3300005332\|Ga0066388_107316653	Not Available	554	Open in IMG/M
3300005363\|Ga0008090_10151579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1389	Open in IMG/M
3300005363\|Ga0008090_15577101	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300005363\|Ga0008090_15757399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	827	Open in IMG/M
3300005434\|Ga0070709_10136658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1679	Open in IMG/M
3300005434\|Ga0070709_10481750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	939	Open in IMG/M
3300005436\|Ga0070713_100199548	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300005437\|Ga0070710_10136609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1499	Open in IMG/M
3300005445\|Ga0070708_100233694	All Organisms → cellular organisms → Bacteria → Proteobacteria	1725	Open in IMG/M
3300005467\|Ga0070706_100127771	All Organisms → cellular organisms → Bacteria	2371	Open in IMG/M
3300005467\|Ga0070706_100640243	All Organisms → cellular organisms → Bacteria → Proteobacteria	987	Open in IMG/M
3300005468\|Ga0070707_100420658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1296	Open in IMG/M
3300005553\|Ga0066695_10337878	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300005559\|Ga0066700_10793389	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300005587\|Ga0066654_10063553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1676	Open in IMG/M
3300005713\|Ga0066905_101823633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300005764\|Ga0066903_100178342	All Organisms → cellular organisms → Bacteria → Proteobacteria	3126	Open in IMG/M
3300005764\|Ga0066903_100553821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1973	Open in IMG/M
3300005764\|Ga0066903_100843557	All Organisms → cellular organisms → Bacteria → Proteobacteria	1647	Open in IMG/M
3300005764\|Ga0066903_100920531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1585	Open in IMG/M
3300005764\|Ga0066903_101096394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Hartmannibacter → Hartmannibacter diazotrophicus	1467	Open in IMG/M
3300005764\|Ga0066903_103304558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	871	Open in IMG/M
3300005764\|Ga0066903_104162832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	774	Open in IMG/M
3300005764\|Ga0066903_105899710	Not Available	642	Open in IMG/M
3300005764\|Ga0066903_106338341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300005764\|Ga0066903_106880758	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005983\|Ga0081540_1024414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3508	Open in IMG/M
3300006031\|Ga0066651_10138915	All Organisms → cellular organisms → Bacteria → Proteobacteria	1264	Open in IMG/M
3300006046\|Ga0066652_101865633	Not Available	541	Open in IMG/M
3300006049\|Ga0075417_10254055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300006173\|Ga0070716_101788091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300006175\|Ga0070712_100908129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300006175\|Ga0070712_101772893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300006794\|Ga0066658_10404169	Not Available	741	Open in IMG/M
3300006800\|Ga0066660_11443062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300006844\|Ga0075428_100020028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	7409	Open in IMG/M
3300006847\|Ga0075431_101860652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300006871\|Ga0075434_102099617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300006903\|Ga0075426_11372210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300006904\|Ga0075424_101751106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300009012\|Ga0066710_100556740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1735	Open in IMG/M
3300009162\|Ga0075423_10991207	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300010043\|Ga0126380_12206752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300010046\|Ga0126384_11354388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	662	Open in IMG/M
3300010046\|Ga0126384_11752447	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300010048\|Ga0126373_11123283	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300010333\|Ga0134080_10597773	Not Available	536	Open in IMG/M
3300010337\|Ga0134062_10238764	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300010337\|Ga0134062_10493197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300010358\|Ga0126370_10349103	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300010376\|Ga0126381_101528883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	964	Open in IMG/M
3300010396\|Ga0134126_10718560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1134	Open in IMG/M
3300010398\|Ga0126383_10915438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	963	Open in IMG/M
3300012180\|Ga0153974_1041097	All Organisms → cellular organisms → Bacteria → Proteobacteria	1010	Open in IMG/M
3300012180\|Ga0153974_1090459	Not Available	690	Open in IMG/M
3300012198\|Ga0137364_10240910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1334	Open in IMG/M
3300012198\|Ga0137364_10865425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300012199\|Ga0137383_10643021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300012200\|Ga0137382_10069812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2249	Open in IMG/M
3300012200\|Ga0137382_10803531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300012201\|Ga0137365_10045484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3336	Open in IMG/M
3300012204\|Ga0137374_10312076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1285	Open in IMG/M
3300012204\|Ga0137374_10435000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1034	Open in IMG/M
3300012204\|Ga0137374_11201207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300012208\|Ga0137376_10396740	Not Available	1198	Open in IMG/M
3300012208\|Ga0137376_10563794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	986	Open in IMG/M
3300012210\|Ga0137378_10016645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6403	Open in IMG/M
3300012285\|Ga0137370_11027869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300012355\|Ga0137369_10662135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	721	Open in IMG/M
3300012357\|Ga0137384_10693346	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300012358\|Ga0137368_10615899	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300012359\|Ga0137385_11540427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300012532\|Ga0137373_11161179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300012923\|Ga0137359_10112779	All Organisms → cellular organisms → Bacteria	2407	Open in IMG/M
3300012929\|Ga0137404_11246463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300012930\|Ga0137407_10551791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1079	Open in IMG/M
3300012951\|Ga0164300_10890402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300012958\|Ga0164299_10112111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1440	Open in IMG/M
3300012971\|Ga0126369_10695642	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300012971\|Ga0126369_13528082	Not Available	512	Open in IMG/M
3300015357\|Ga0134072_10175807	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300016319\|Ga0182033_12027642	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300016387\|Ga0182040_10229253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1383	Open in IMG/M
3300016422\|Ga0182039_11447000	Not Available	625	Open in IMG/M
3300018433\|Ga0066667_10143062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1674	Open in IMG/M
3300020581\|Ga0210399_10889262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	723	Open in IMG/M
3300021178\|Ga0210408_10058316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3016	Open in IMG/M
3300021478\|Ga0210402_10279333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1544	Open in IMG/M
3300021560\|Ga0126371_11625282	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300021560\|Ga0126371_12648092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300021560\|Ga0126371_13253429	Not Available	549	Open in IMG/M
3300025910\|Ga0207684_10337425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1298	Open in IMG/M
3300025910\|Ga0207684_11312154	Not Available	595	Open in IMG/M
3300025922\|Ga0207646_10322790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1395	Open in IMG/M
3300025928\|Ga0207700_10338591	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300026310\|Ga0209239_1001866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12593	Open in IMG/M
3300026326\|Ga0209801_1176456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	882	Open in IMG/M
3300026327\|Ga0209266_1020348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3686	Open in IMG/M
3300027326\|Ga0209731_1083798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300027873\|Ga0209814_10048171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1777	Open in IMG/M
3300027909\|Ga0209382_10068409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4200	Open in IMG/M
3300027909\|Ga0209382_10074559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4005	Open in IMG/M
3300028811\|Ga0307292_10302646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	670	Open in IMG/M
3300028881\|Ga0307277_10002894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6611	Open in IMG/M
3300031544\|Ga0318534_10712985	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300031545\|Ga0318541_10698531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300031573\|Ga0310915_10034772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3172	Open in IMG/M
3300031573\|Ga0310915_10494035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	869	Open in IMG/M
3300031681\|Ga0318572_10369168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	852	Open in IMG/M
3300031713\|Ga0318496_10541819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300031719\|Ga0306917_10553112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	904	Open in IMG/M
3300031777\|Ga0318543_10068781	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300031792\|Ga0318529_10027338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2333	Open in IMG/M
3300031796\|Ga0318576_10234891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	864	Open in IMG/M
3300031890\|Ga0306925_10834773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	953	Open in IMG/M
3300031893\|Ga0318536_10408023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	686	Open in IMG/M
3300031897\|Ga0318520_10579166	Not Available	697	Open in IMG/M
3300031941\|Ga0310912_11230409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300031945\|Ga0310913_10119814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	1796	Open in IMG/M
3300031954\|Ga0306926_10482406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1525	Open in IMG/M
3300031954\|Ga0306926_10879369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1074	Open in IMG/M
3300032052\|Ga0318506_10561837	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300032068\|Ga0318553_10549373	Not Available	605	Open in IMG/M
3300032094\|Ga0318540_10078928	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.91%
Host-Associated	Host-Associated	9.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.21%
Plants	Host-Associated → Plants	7.69%
Fungi	Host-Associated → Fungi	1.40%
Unclassified	Environmental → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.99%
Mycelium	Host-Associated → Fungi → Mycelium	1.40%
Unclassified	Environmental → Unclassified → Unclassified	0.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.34%
Loam	Environmental → Terrestrial → Soil → Loam	25.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.99%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.40%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.99%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.10%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.40%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.49%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.39%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.80%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.10%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.70%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.70%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.70%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908016	Sample 642	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03917030	2088090014	Soil	MPPPEKLLTELTKIGGRQPRTHALWVDERDTPADIDAKRDRLIAAGRARPDDTFVCVRWKRPGEA
OU_01892200	2124908016		MAPREKLLTKLRKTGVRQPRTHALWVDERDTPADIDAKRDHLIAAGRARPGDTFVCVRWKRPGEA
E41_11991190	2170459005	Grass Soil	MPPPEKLLTELTKIGVRQPRIYPLWVDARDTPADIDAKRDRLIAAGRARPDDTFVCVRWKRPGET
AF_2010_repII_A1DRAFT_100860172	3300000597	Forest Soil	MPPRDDRLTKLRKDAGREPRTFLLWVDALDTPADIDAKRDRMIAAGRARPDDTFVQVRWKRRDET*
JGI1027J12803_1083607122	3300000955	Soil	RKRAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAHPDDTFVHVRWKRPDET*GEH
JGI25614J43888_102085302	3300002906	Grasslands Soil	MPLPENWLTKLTKSAVRPPRTHLLWVDHRDAPADIDAKRDRLIAAGRARPDDTFVHVRWKRQDET*
Ga0066395_108553141	3300004633	Tropical Forest Soil	MPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAHPDDTFVHIRWKRP
Ga0066674_105340202	3300005166	Soil	MPPPENWLTKLTKTGVRQPRTHLLWVDARDTPADIEAKRDRMIAAGRARPDDTFVHVRWKRRDET*
Ga0066683_100566003	3300005172	Soil	MPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAHPDDTFVHVRWKRPDET*
Ga0066688_103290372	3300005178	Soil	MPPPENWLTKLTKTGVRQPRTHLLWVDARDTPADIEAKRDRIIAAGRARPDDTFVHVRWKRRDET*
Ga0066675_100478242	3300005187	Soil	MPPPEKLLTRLTKKNDVRRPRTHALWVDARDTPADIDAKRDRLIAAGRARPGDTFVCVRWKRPGET*
Ga0066388_1000864244	3300005332	Tropical Forest Soil	MPPRDDRLTKLRKDAGREPRTFLLWVDARDTPADIDAKRDRMIAAGRARPDDTFVQVRWKRRDET*
Ga0066388_1007940723	3300005332	Tropical Forest Soil	MAPREKLLTELRKTGVRQPRTHALWVDARDTPADIDAKRDRLIAAGRARPGDTFVCVR
Ga0066388_1011357491	3300005332	Tropical Forest Soil	PRMPPPEKLLTKLTKKNDVRRPRTHALWVDARDTPADIDAKRDRLIAAGRARPGDTFVRVRWKRPGEL*
Ga0066388_1019677702	3300005332	Tropical Forest Soil	MPPRDNRLTQLRKRAVRQPRTHMLWVYHRVTPADTQAKRDRLIAEGRAHPDDTFVHIRWKRPDET*
Ga0066388_1033094002	3300005332	Tropical Forest Soil	MPPPEKLLTKLRKTGVRRPRTHALWVDARDTPADIDAKRDRLIAAGRARPDDAFVCVRWKRPGET*
Ga0066388_1035942912	3300005332	Tropical Forest Soil	MPPPKNWLTKLTKSSVRGPRTHLLWVDARDTPADIEAKRDRLIAAGRAHPDDIFVRVRWRRQDET*
Ga0066388_1062398601	3300005332	Tropical Forest Soil	MPPPEKLLTKLTKKNDVRRPRTHALWVDARDTPADIDAKRDRLIAAGRARPGDTFVCVRWKRPGET*
Ga0066388_1069507431	3300005332	Tropical Forest Soil	MPPRDDRLTKLRKDAGREPRTHLLVRDTPADIDAKRDRMIAAGRARPDDTFVHVRWKRRENLR
Ga0066388_1073166531	3300005332	Tropical Forest Soil	MPPRDNRLTQLRKRAVRLPRTHMLWVHHRDTPADTQAKRDRLIAEGRAHPDDTFVHI
Ga0008090_101515792	3300005363	Tropical Rainforest Soil	MPPRDDRLTKLRKSAGREPRTQLIWVDARDTPADIDAKRDRMIADGRARPDDTFVQVRWKRRDEI*
Ga0008090_155771012	3300005363	Tropical Rainforest Soil	MPPPDNRLTQLRKRAVRQPCTHLLWVHHRDTPADTQAKRDRLIAEGRAHPDDIFVRVRWRRQDET*
Ga0008090_157573991	3300005363	Tropical Rainforest Soil	MPPPEKLLTTLTKKMDVRRPRTHALWVDARDTAADIDAKRDRLIAAGRARPGDTFVCVRWKRPGEI*
Ga0070709_101366581	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TKIGGRQPRTHALWVDERDTPADIDAKRDRLIAEGRARPDDTFVCVRWKRPGEA*
Ga0070709_104817501	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPPPEKLLTELTKIGGRQPRTHALWVDERDTPADIDAKRDRLIAAGRARPDDTFVCVRWKRPGEA*
Ga0070713_1001995481	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GSHMAPREKLLTKLRKTGVRRARTHALWVDARDTPADIDAKRDHLIAAGRARPGDTFVCVRWKRPDET*
Ga0070710_101366092	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPPPEKLLTELTKIGGRQPRTHALWVDERDTPADIDAKRDRLIAEGRARPDDTFVCVRWKRPGEA*
Ga0070708_1002336942	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAYPDDTFVHVRWKRPDET*
Ga0070706_1001277711	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPPRDNRLTQLRKRAVRQPRTHMLWVHHGDTPADTQAKRDRLIAEGRAHPDDTFVHVRWKRPDET*
Ga0070706_1006402433	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GRQRHARMPLPENWLTKLTKSAVRQPRTHLLWVDHRDAPADIDAKRDRLIAAGRARPDDTFVHVRWKRQDET*
Ga0070707_1004206584	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPPRDNRLTQLRKRAVRQPRTHMLWVHHGDTPADTQAKRDRLIAEGRAHPDD
Ga0066695_103378781	3300005553	Soil	LRPAPMPPPDNWLMKLRKSGARQPRTYPLWVDARDTPADIEAKRNRLIAAGRARADDTFVHVRWKRRDEI*
Ga0066700_107933891	3300005559	Soil	RNGRQRHAPMPPPGDWLMKLMKSAVHQPRTHLLWVDDRDAPADTQAKRDRLVAEGRAHPDDTFVHVPWKRQEET*
Ga0066654_100635534	3300005587	Soil	MPPPEKLLTRLTKKNDVRRPRTHALWVDARDTPADIDAKRDRLIAAGRARPGDTFVCVRW
Ga0066905_1018236331	3300005713	Tropical Forest Soil	MPPRDNRLAQLRQRAVRQPRTHLLWVDHRDTPADTQAKRDRLIAEGRAHPDDTFVHVRWKRPDET*
Ga0066903_1001783422	3300005764	Tropical Forest Soil	MPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPAGTQAKRDRLIAEGRAHPDDTFVHVRWKRQDET*
Ga0066903_1005538213	3300005764	Tropical Forest Soil	MAPREKLLTELRKTGVRQPRTHALWVDARDTPADIDAKRDRLIAAGRARPGDTFVCVRRKRPGET*
Ga0066903_1008435572	3300005764	Tropical Forest Soil	MPPPENRLTKLTKRVVRQPRTHLLWVDHRDTPADTEAKRDRLIAEGRAHPDDIFVRVRWKRQDET*
Ga0066903_1009205312	3300005764	Tropical Forest Soil	MPPPEKLLTKLRKTGVRRPRTHALWVDARDTPADIDAKRDRLIAAGRARPGDTFVCVRWKRPGET*
Ga0066903_1010963942	3300005764	Tropical Forest Soil	MPPPEKLLTKLTKKNDVRRPRTHALWVDARDTPADIDAKRDRLIAAGRARPGDTFVCVRWKRPGEL*
Ga0066903_1033045583	3300005764	Tropical Forest Soil	LPRRPPTRAAEVRAHAAPPKKWLTKVTKTGIRQPRIEALWVDARDTPADIDAKRDRLIAAGRARPDDTFVRVRWKRPGET*
Ga0066903_1041628321	3300005764	Tropical Forest Soil	MPPRDDRLTKLRKSAGREPRTFLLWVDARDTPADIDAKRDRMIAAGRARPDDTFVQVRWKRRDET*
Ga0066903_1058997101	3300005764	Tropical Forest Soil	AAMPPRDNRLTQLRKRAVRLPRTHMLWVHHRDTPADTQAKCDRLIAEGRAHPDDTFVHIRWKRPDET*
Ga0066903_1063383412	3300005764	Tropical Forest Soil	MPPPEKLLTKLTKKNDVRRPRTHALWVDARDTPADIDAKRDRLIAAGRARPGDTFVCVRWKRPGEA*
Ga0066903_1068807582	3300005764	Tropical Forest Soil	AACRGMRRRGCLRHAAMPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAHPDDTFVRIRWKRPDET*
Ga0081540_10244141	3300005983	Tabebuia Heterophylla Rhizosphere	MPPREKRLTELTKSGRRQPSTHLLWVDARDTPADIDAKRDRLIAAGRARPDDTFVCVRWKRPGET*
Ga0066651_101389151	3300006031	Soil	TKKNDVRRPRTHALWVDARDTPADIDAKRDRLIAAGRARPGDTFVCVRWKRPGET*
Ga0066652_1018656332	3300006046	Soil	MPPPANWLTKLTKSGVRQPRTYPLWVDARDTPADIEAKRNRLIAAGRARADDTFVHVRWKRRDEI*
Ga0075417_102540551	3300006049	Populus Rhizosphere	MRLPENWLTKLTKTSAGQPRTHLLWVDARDTPTDIEAKRDRMIAAGRARPDDTFVHVRWKRRDET*
Ga0070716_1017880911	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPPPEKLLTKLTKRGVRQPRIYPLWVDARDTPGDIDAKRDRLIAAGRARPDDTFVCVRWKRPGET*
Ga0070712_1009081292	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAPREKLLTKLRKTGVRRARTHALWVDARDTPADIDAKRDHLIAAGRARPGDTFVCVRWKRPDET*
Ga0070712_1017728931	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KLLTELTKIGGRQPRTHALWVDERDTPADIDAKRDRLIAEGRARPDDTFVCVRWKRPGEA
Ga0066658_104041691	3300006794	Soil	TKTGVRQPRTHLLWVDARDTPADIEAKRDRIIAAGRARPDDTFVHVRWKRRDET*
Ga0066660_114430622	3300006800	Soil	MPPPEKLLTRLTKKNDVRRPRTHALWVDARDTPADIDAKRDRLIAAGRARPDDTFVCVRWKRPGEA*
Ga0075428_1000200282	3300006844	Populus Rhizosphere	MRLPENWLTKLTKTSARQPRTHLLWVDARDTPTDIEAKRDRMIAAGRARPDDTFVHVRWKRRDET*
Ga0075431_1018606522	3300006847	Populus Rhizosphere	MPPPDNWLTKLTKSGTPQPRTHLLWVDARDTPADIEAKHLIAAGRAHSYDTFVHVRWKWQNQT*
Ga0075434_1020996172	3300006871	Populus Rhizosphere	MPPPDNWLIKLRKSRARQPRTYPLWVDARDTPADIEAKRDRLIAAGRARPDDTFVHVRWKRRDET*
Ga0075426_113722102	3300006903	Populus Rhizosphere	MPPPEKLLTELTKIGGRQPRTHALWVDERDTPADIDAKRDRLIAEGRAHPDDTFVCVRWKRPGEA*
Ga0075424_1017511062	3300006904	Populus Rhizosphere	MPPPEKLLTELTKIGGRQPRTHALWVDERDTPADIDAKRDRLIAAGRARPDDTFVYVRWKGAMEPSQGPVLSAR*
Ga0066710_1005567403	3300009012	Grasslands Soil	MPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTQAKRDRLISEGRAHPDDTFLHVRWKRPDET
Ga0075423_109912072	3300009162	Populus Rhizosphere	MPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAHPDDTFVHIRWKRPDET*
Ga0126380_122067521	3300010043	Tropical Forest Soil	LTKLRKDAGREPRTFLLWVDARDTPADIDAKRDRMIAAGRARPDDTFVQVRWKRRDET*
Ga0126384_113543882	3300010046	Tropical Forest Soil	MPPRDDRLTKLRKDAGREPRTFLLWVDARDTPVDIDAKRDRMIAAGRARPDDTFVQLRWKRRDEI*
Ga0126384_117524471	3300010046	Tropical Forest Soil	EAVASIAMPPPENRLTKLTKRVVRQPRTHMLWVHHRDTPADTQAKRDRLITEGRAHPDDTFVHIRWKRQDET*
Ga0126373_111232833	3300010048	Tropical Forest Soil	CRGMRRRGRLRHAAMPPRDNRLTQLRKRAVRQPRIHMLWVHHRDTPADTQAKRDRLIADGRAHPDDTFVHIRWKRPDET*
Ga0134080_105977732	3300010333	Grasslands Soil	MPPRDNRLTQLRKRAVRQPRTHMLRVHHRDTPADTQAKRDRLIAEGRAYPDDTFVHDRWKRPDET*
Ga0134062_102387642	3300010337	Grasslands Soil	RKRAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAYPDDTFVHVRWKRPDET*
Ga0134062_104931971	3300010337	Grasslands Soil	MPPPDNWLTKLTKTGVRQPRTHLLWVDARDTPADIEAKRDRIIAAGRARPDDTFVHVRWKRRDETGD
Ga0126370_103491032	3300010358	Tropical Forest Soil	MPPPKKWLTKVTKTGIRQPRIHALWVDARDTPADIDAKRDRLIAAGRARPGDTFVCVRWKRPGET*
Ga0126381_1015288832	3300010376	Tropical Forest Soil	MPPRDDRLTKLRKSAGREPRTQLLWVDARDTPADIDAKRDRMIADGRARPDDTFVQVRWKRRDET*
Ga0134126_107185603	3300010396	Terrestrial Soil	MPPPEKLLTELTKIGGRQPRTHALWVDERDTSADIDAKRDRLIAEGRARPDDTFVCVRWKRPGEA*
Ga0126383_109154381	3300010398	Tropical Forest Soil	MPPRDDVLAKLRKSAGREPRTFLLWVDARDTPADIDAKRDRMIADGRARPDDTF
Ga0153974_10410971	3300012180	Attine Ant Fungus Gardens	VRRNERLRHARRPLPENWLTKLTKSAVRQPRTHLLWVDHRDAPADIDAKRDRLIAAGRARPDDTFVHVRWKRQDET*
Ga0153974_10904592	3300012180	Attine Ant Fungus Gardens	MAPLENRLAKLTKSAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAHPDDTFVHIRWKRPDET*
Ga0137364_102409102	3300012198	Vadose Zone Soil	MPPPENWLTKLTKSGRRQPSTHLLWVDARDTPADIEAKRDRMIAAGRARPDDTFVHVRWKRRDET*
Ga0137364_108654251	3300012198	Vadose Zone Soil	MKLRKSGARQPRTYPLWVDARDTPADIEAKRNRLIAAGRARADDTFV
Ga0137383_106430212	3300012199	Vadose Zone Soil	MPPPDTWRTKLTKSEVRQPRTHLLGVVARGTPADIEAKRNRLIAADRAQASDTFVHVRWKRRDET*
Ga0137382_100698124	3300012200	Vadose Zone Soil	MRPMPPPENWLTKLTKSAVRQPRTHLLWVDHRDAPADIDAKRDRLIAAGRARPDDTFVHVRWKRQDET*
Ga0137382_108035312	3300012200	Vadose Zone Soil	MPPPEKLLTELAKIGVRRPRTHALWVDERDTPADIEAKRNRLIAAGRARADDTFVHVRWKRRDEI*
Ga0137365_100454844	3300012201	Vadose Zone Soil	MPPPDTWRTKLTKSEVRQPRTHLLGVDARGTPADIEAKRNRLIAADRAQASDTFVHVRWKRRDET*
Ga0137374_103120762	3300012204	Vadose Zone Soil	MPPPENWLTKLTKSGHRQPSTHLLWVNARDTPADIEAKRDRMIAAGRARPDDTFVRVRWKRRDET*
Ga0137374_104350001	3300012204	Vadose Zone Soil	MPPPDNWLMKLRKSGARQPRTHMLWMDARDTPADMDAKRDRMIAAGRAHADDTFVHVRWKRRDEI*
Ga0137374_112012072	3300012204	Vadose Zone Soil	MPPPDNWLTKLTKSGARQPRTHLLWVDARDTPADIEAKRNRLIAAGRAHADDTFVHVRWKRRDE
Ga0137376_103967401	3300012208	Vadose Zone Soil	MPPPEKLLTELAKIGVRRPRTHALWVDERDTPADIEAKRDRLIAAGRARPDDTFVCVRWKRRDGT*
Ga0137376_105637941	3300012208	Vadose Zone Soil	MKLRKSGARQPRTYPLWVDARDTPADIEAKRNRLIAAGRARADDTFVHVRWKRRDET*
Ga0137378_100166453	3300012210	Vadose Zone Soil	MPPPDTWRTKLTKSEVRQPRTHLLGVDARRTPADIEAKRNRLIAADRAQASDTFVHVRWKRRDET*
Ga0137370_110278692	3300012285	Vadose Zone Soil	MPPPDNWLMKLRKSGARQPRTYPLWVDARDTPADIEAKRNRLIAAGRAHADDTFVHVRWKRRDEA*
Ga0137369_106621352	3300012355	Vadose Zone Soil	MSPPGNWLTKLTKSGHRQPRTHLLWVNARDTPADIEAKRDRMIAAGRARPDDTFVHVRWKRRDET*
Ga0137384_106933462	3300012357	Vadose Zone Soil	DNWLMKLRKSGARQPRTYPLWVDARDTPADIEAKRNRLIAAGRARADDTFVHVRWKRRDET*
Ga0137368_106158992	3300012358	Vadose Zone Soil	TKSGHRQPSTHMLWVDARDTPADIEAKRDRMIAAGRARPDDTFVHVRWKRRDEV*
Ga0137385_115404271	3300012359	Vadose Zone Soil	APMPPPENWLTKLTKSGRRQPSTHLLWVDARDTPADIEAKRDRMIAAGRARPDDTFVHVRWKRRDET*
Ga0137373_111611791	3300012532	Vadose Zone Soil	MPPPENWLTKLTKSGRRQPSTHRLWVDARDTPADIEAKRDRMIAAGRARPDDTFV
Ga0137359_101127794	3300012923	Vadose Zone Soil	TKLTKSAVRPPRTHLLWVDPRDAPADIDAKRDRLIAAGRARPDDTFVHVRWKRQDET*
Ga0137404_112464631	3300012929	Vadose Zone Soil	MKLRKSGARQPRTYPLWVDARDTPADIEAKRNRLIAAGRARADDTFVHV
Ga0137407_105517913	3300012930	Vadose Zone Soil	MPPPDNWLMKLRKSGARQPRTYPLWVDARDTPADIEAKRNRLIAAGRARADDTFVHVRWKRRDET*
Ga0164300_108904021	3300012951	Soil	MPPPEKLLTELTKIGGRQPRTHALWVDERDTPADIDAKRDRLIAAGRERPDDTFVCVRWKRPGEA*
Ga0164299_101121112	3300012958	Soil	MPPPEKLLTELTKIGGRQPRTHALWVDERDTPADIDAKRDRLIAAGRARPDYTFVCVRWKRPG*
Ga0126369_106956421	3300012971	Tropical Forest Soil	KRAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAHPDDIFVHIRWKRPDET*
Ga0126369_135280821	3300012971	Tropical Forest Soil	PPRDNRLTQLRKRAVRLPRTHMLWVHHRDTPADTQAKCDRLIAEGRAHPDDTFVHIRWKRPDET*
Ga0134072_101758071	3300015357	Grasslands Soil	KLLTKLRKTGVRRPRTHALWVDARDTPADIDAKRDRLIAAGRARPGDTFVCVRWKRPGET
Ga0182033_120276421	3300016319	Soil	HAAMPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTEAKRDRLIAEGRAHPDDTFVPVRWKRRDET
Ga0182040_102292533	3300016387	Soil	MPPRDDRLTKLRKDAGREPRTFLLWVDAGDTPADIDAKRDRMIAAGRARPDDTFVQVRWKRRD
Ga0182039_114470001	3300016422	Soil	MPPRDNRLAQLRKRAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAHPDDTFVHIRWKRPDET
Ga0066667_101430622	3300018433	Grasslands Soil	MPPPEKLLTRLTKKNDVRRPRTHALWVDARDTPADIDAKRDRLIAAGRARPGDTFVCVRWKRPGET
Ga0210399_108892621	3300020581	Soil	MPPPEKLLTELTKIGGRQPRTHALWVDERDTPADIDAKRDRLIAAGRARPDDT
Ga0210408_100583162	3300021178	Soil	MAPLENRLAKLTKSAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGQAHPDDTFVHVRWKRPDET
Ga0210402_102793333	3300021478	Soil	MPPPEKLLTKLTKSGVRQPRIYPLWVDARDTPADIDAKRDRLIAAGRARPDDTFVCVRWKRPGEA
Ga0126371_116252821	3300021560	Tropical Forest Soil	PRMPPPEKLLTTLTKKNDVRRPRTHALWVDARDTPADIDAKRDRLIAAGRARPGDTFVCVRWKRPGET
Ga0126371_126480921	3300021560	Tropical Forest Soil	MPPRDDRLTKLRKDAGREPRTFLLWVDARDTPADIDAKRDRMIAAGRARPDDTFVQVRWKRRDET
Ga0126371_132534292	3300021560	Tropical Forest Soil	MPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAHPDDTFVHIRWK
Ga0207684_103374252	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAYPDDTFVHVRWKRPDET
Ga0207684_113121541	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPLPENWLTKLTKSAVRQPRTHLLWVDHRDAPADIDAKRDRLIAAGRARPDDTFVHVRWKRQDET
Ga0207646_103227902	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPPRDNRLTQLRKRAVRQPRTHMLWVHHGDTPADTQAKRDRLIAEGRAHPDDTFVHVRWKRPDET
Ga0207700_103385911	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GSHMAPREKLLTKLRKTGVRRARTHALWVDARDTPADIDAKRDHLIAAGRARPGDTFVCVRWKRPDET
Ga0209239_10018667	3300026310	Grasslands Soil	MPPPENWLTKLTKTGVRQPRTHLLWVDARDTPADIEAKRDRIIAAGRARPDDTFVHVRWKRRDET
Ga0209801_11764562	3300026326	Soil	MPPPENWLTKLTKTGVRQPRTHLLWVDARDPPADIEAKRDRIIAAGRARPDDTFVHVRWKRQDET
Ga0209266_10203482	3300026327	Soil	MPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAHPDDTFVHVRWKRPDET
Ga0209731_10837981	3300027326	Forest Soil	LTKIGGRQPRTHALWVDERDTPADIDAKRDRLIAEGRARPDDTFVCVRWKRPGEA
Ga0209814_100481712	3300027873	Populus Rhizosphere	MRLPENWLTKLTKTSAGQPRTHLLWVDARDTPTDIEAKRDRMIAAGRARPDDTFVHVRWKRRDET
Ga0209382_100684091	3300027909	Populus Rhizosphere	LADETHEKRDAQPRTHLLWVDARDTPADIEAKHLIAAGRAHSYDTFVHVRWKWQNQT
Ga0209382_100745596	3300027909	Populus Rhizosphere	MRLPENWLTKLTKTSARQPRTHLLWVDARDTPTDIEAKRDRMIAAGRARPDDTFVHVRWKRRDET
Ga0307292_103026461	3300028811	Soil	MPPPEKLLTELTKISGRQPRTHALWVDERDTPADIDAKRDRLIAEGRARPDDTFV
Ga0307277_100028942	3300028881	Soil	MPPPEKLLTELTKIGGRQPRTHALWVDERDTPADIDAKRDRLITEGRARPDDTFVCVRWKRPGEA
Ga0318534_107129852	3300031544	Soil	MPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTEAKRDRLIAEGRAHPDDTFVPVRWKRRDET
Ga0318541_106985312	3300031545	Soil	MPPRDDRLTTLRKDAGREPRTFLLWVDARDTPADIDAKRDRMIAAGRARPDDTFVQVRWKRRDEI
Ga0310915_100347723	3300031573	Soil	MPPRDDRLTKLRKDAGREPRTFLLWVDARDTPADIDAKRDRMIAAGRARPDDTFVQVRWKRRDEI
Ga0310915_104940351	3300031573	Soil	MPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAHPDDTFVHIRWKRPDET
Ga0318572_103691682	3300031681	Soil	MPPRDNRLAQLRKRAVRQPRTHMLWVHHRDTPADTEAKRHRLIAEGRAHPDDTFVPVRWKRRDET
Ga0318496_105418191	3300031713	Soil	GLRRPDRLRDAPMPPRDDRLTTLRKDAGREPRTFLLWVDARDTPADIDAKRDRMIAAGRARPDDTFVQVRWKRRDEI
Ga0306917_105531123	3300031719	Soil	MPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTQAKRDRLIAEGRAHPDDTFVHIRWKRPDEP
Ga0318543_100687811	3300031777	Soil	AMPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTEAKRDRLIAEGRAHPDDTFVPVRWKRRDET
Ga0318529_100273381	3300031792	Soil	TQLRKRAVRQPRTHMLWVHHRDTPADTEAKRDRLIAEGRAHPDDTFVPVRWKRRDET
Ga0318576_102348912	3300031796	Soil	MPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTEAKRHRLIAEGRAHPDDTFVPVRWKRRDET
Ga0306925_108347731	3300031890	Soil	MPPRDDRLTKLRKDAGREPRTFLLWVDAGDTPADIDAKRDRMIAAGRARPDDTFVQVRWKRRDET
Ga0318536_104080231	3300031893	Soil	MPPRDDRLTTLRKDAGREPRTFLLWVDARDTPADIDAKRDRMIAAGRARPDDT
Ga0318520_105791662	3300031897	Soil	MPPRDDRLTKLRKDAGREPRTFLLWVDAGDTPADIDAKRDRMIAAGRARPDDTFVQVRWKRRDEI
Ga0310912_112304091	3300031941	Soil	RPDRLRDAPMPPRDDRLTTLRKDAGREPRTFLLWVDARDTPADIDAKRDRMIAAGRARPDDTFVQVRWKRRDEI
Ga0310913_101198141	3300031945	Soil	PPRDDRLTTLRKDAGREPRTFLLWVDARDTPADIDAKRDRMIAAGRARPDDTFVQVRWKRRDEI
Ga0306926_104824063	3300031954	Soil	MPPRDNRLAQLRKRAVRQPRTHMLWVHHGDTPADTQAKRDRLIAEGRAQPDDTFVHIRWKRPDET
Ga0306926_108793693	3300031954	Soil	MPPRDDRLTKLRKDAGREPRTFLLWVDAGDTPADIDAKRDRMIAAGRARPDDTFVQV
Ga0318506_105618372	3300032052	Soil	MPPRDNRLKQLRKRAVRQPRTHMLWVHHRDTPADTEAKRDRLIAEGRAHPDDTFVPVRWKRRDET
Ga0318553_105493731	3300032068	Soil	MRRRGRLRHAAMPPRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTEAKRDRLIAEGRAHPDDTFVPVRWKRRDET
Ga0318540_100789282	3300032094	Soil	PRDNRLTQLRKRAVRQPRTHMLWVHHRDTPADTEAKRDRLIAEGRAHPDDTFVPVRWKRRDET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052118

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences