Metagenome / Metatranscriptome Family F051840

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051840
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	87 residues
Representative Sequence	MFFWNCEAASPVDYALLVIAATAWVYAAWCLIQLRYERRRPLVWWEPVPLSNTDLTPLGREYHRRFFLALLAGACAILLAVALCASR
Number of Associated Samples	114
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.24 %
% of genes near scaffold ends (potentially truncated)	21.68 %
% of genes from short scaffolds (< 2000 bps)	67.83 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.776 % of family members)
Environment Ontology (ENVO)	Unclassified (30.070 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.650 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.30% β-sheet: 1.74% Coil/Unstructured: 46.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.72965
e.18.1.0: automated matches	d5odqf_	5odq	0.72947
f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits	d3t6em_	3t6e	0.70301
f.5.1.0: automated matches	d3pika_	3pik	0.70133
a.4.5.61: PadR-like	d1yg2a_	1yg2	0.70034

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF13472	Lipase_GDSL_2	27.27
PF00722	Glyco_hydro_16	16.78
PF13520	AA_permease_2	6.29
PF14534	DUF4440	5.59
PF00728	Glyco_hydro_20	4.20
PF01894	UPF0047	3.50
PF00144	Beta-lactamase	2.80
PF02518	HATPase_c	2.80
PF12867	DinB_2	2.80
PF01263	Aldose_epim	2.10
PF14698	ASL_C2	1.40
PF01546	Peptidase_M20	1.40
PF00657	Lipase_GDSL	1.40
PF02838	Glyco_hydro_20b	1.40
PF01262	AlaDh_PNT_C	0.70
PF00005	ABC_tran	0.70
PF04794	YdjC	0.70
PF07676	PD40	0.70
PF13193	AMP-binding_C	0.70
PF13798	PCYCGC	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG2273	Beta-glucanase, GH16 family	Carbohydrate transport and metabolism [G]	16.78
COG3525	N-acetyl-beta-hexosaminidase	Carbohydrate transport and metabolism [G]	5.59
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	3.50
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	2.80
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	2.80
COG2367	Beta-lactamase class A	Defense mechanisms [V]	2.80
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	2.10
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	2.10
COG3394	Chitooligosaccharide deacetylase ChbG, YdjC/CelG family	Carbohydrate transport and metabolism [G]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	53.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.40 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	53.15 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	37.76 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	10.49 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	37.76 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	10.49 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	37.76 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	10.49 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	37.76 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	7.69 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	37.76 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7.69 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.70 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10637069	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300001686\|C688J18823_10253314	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1169	Open in IMG/M
3300002562\|JGI25382J37095_10083787	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1166	Open in IMG/M
3300002562\|JGI25382J37095_10097112	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1049	Open in IMG/M
3300003319\|soilL2_10034180	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300003319\|soilL2_10110818	All Organisms → cellular organisms → Bacteria	1968	Open in IMG/M
3300003319\|soilL2_10199564	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1048	Open in IMG/M
3300004114\|Ga0062593_101031153	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	847	Open in IMG/M
3300004463\|Ga0063356_100143177	All Organisms → cellular organisms → Bacteria	2707	Open in IMG/M
3300004479\|Ga0062595_100035651	All Organisms → cellular organisms → Bacteria	2108	Open in IMG/M
3300005166\|Ga0066674_10087874	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1435	Open in IMG/M
3300005171\|Ga0066677_10063916	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300005176\|Ga0066679_10214376	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300005184\|Ga0066671_10035856	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2380	Open in IMG/M
3300005336\|Ga0070680_100014012	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6259	Open in IMG/M
3300005336\|Ga0070680_100129449	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300005336\|Ga0070680_100558917	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300005341\|Ga0070691_10264138	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	928	Open in IMG/M
3300005440\|Ga0070705_100974787	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005444\|Ga0070694_100001932	All Organisms → cellular organisms → Bacteria	12285	Open in IMG/M
3300005444\|Ga0070694_100274085	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300005444\|Ga0070694_100605259	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	883	Open in IMG/M
3300005451\|Ga0066681_10036639	All Organisms → cellular organisms → Bacteria	2621	Open in IMG/M
3300005468\|Ga0070707_100453591	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1243	Open in IMG/M
3300005526\|Ga0073909_10197757	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300005530\|Ga0070679_101160635	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	717	Open in IMG/M
3300005536\|Ga0070697_100758903	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300005537\|Ga0070730_10000667	All Organisms → cellular organisms → Bacteria	37413	Open in IMG/M
3300005555\|Ga0066692_10781272	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	588	Open in IMG/M
3300005560\|Ga0066670_10806220	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	569	Open in IMG/M
3300005566\|Ga0066693_10076370	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1171	Open in IMG/M
3300005576\|Ga0066708_11040479	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	508	Open in IMG/M
3300005713\|Ga0066905_100000606	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	10505	Open in IMG/M
3300005895\|Ga0075277_1004375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1711	Open in IMG/M
3300006031\|Ga0066651_10005032	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5027	Open in IMG/M
3300006791\|Ga0066653_10224353	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	956	Open in IMG/M
3300006844\|Ga0075428_100056546	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4297	Open in IMG/M
3300006845\|Ga0075421_100222902	All Organisms → cellular organisms → Bacteria	2323	Open in IMG/M
3300006845\|Ga0075421_100845975	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1049	Open in IMG/M
3300006847\|Ga0075431_100536455	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300006852\|Ga0075433_10101381	All Organisms → cellular organisms → Bacteria	2549	Open in IMG/M
3300006852\|Ga0075433_10416769	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1184	Open in IMG/M
3300006854\|Ga0075425_100147558	All Organisms → cellular organisms → Bacteria	2693	Open in IMG/M
3300006854\|Ga0075425_102118429	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	627	Open in IMG/M
3300006914\|Ga0075436_100745321	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	727	Open in IMG/M
3300007004\|Ga0079218_12033170	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	658	Open in IMG/M
3300007255\|Ga0099791_10011581	All Organisms → cellular organisms → Bacteria	3697	Open in IMG/M
3300007258\|Ga0099793_10006099	All Organisms → cellular organisms → Bacteria	4413	Open in IMG/M
3300007258\|Ga0099793_10198170	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300009012\|Ga0066710_102039094	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	848	Open in IMG/M
3300009012\|Ga0066710_102868528	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	678	Open in IMG/M
3300009089\|Ga0099828_10001913	All Organisms → cellular organisms → Bacteria	14192	Open in IMG/M
3300009137\|Ga0066709_100385196	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1939	Open in IMG/M
3300009143\|Ga0099792_10016215	All Organisms → cellular organisms → Bacteria	3241	Open in IMG/M
3300009143\|Ga0099792_10502255	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	760	Open in IMG/M
3300009156\|Ga0111538_11664689	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	804	Open in IMG/M
3300009162\|Ga0075423_12386297	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	576	Open in IMG/M
3300009176\|Ga0105242_11969529	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300009678\|Ga0105252_10057421	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1487	Open in IMG/M
3300010323\|Ga0134086_10016602	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2320	Open in IMG/M
3300010364\|Ga0134066_10279026	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	591	Open in IMG/M
3300010401\|Ga0134121_10326382	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300011270\|Ga0137391_10024827	All Organisms → cellular organisms → Bacteria	4981	Open in IMG/M
3300011443\|Ga0137457_1060539	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1130	Open in IMG/M
3300012189\|Ga0137388_10095695	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2539	Open in IMG/M
3300012198\|Ga0137364_10037286	All Organisms → cellular organisms → Bacteria	3154	Open in IMG/M
3300012198\|Ga0137364_10605088	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300012203\|Ga0137399_10263695	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300012203\|Ga0137399_10543789	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	975	Open in IMG/M
3300012212\|Ga0150985_114814267	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	925	Open in IMG/M
3300012285\|Ga0137370_10004757	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6096	Open in IMG/M
3300012285\|Ga0137370_10105534	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300012351\|Ga0137386_10563936	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	820	Open in IMG/M
3300012363\|Ga0137390_11821768	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	539	Open in IMG/M
3300012469\|Ga0150984_102307783	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1729	Open in IMG/M
3300012469\|Ga0150984_110263841	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	570	Open in IMG/M
3300012683\|Ga0137398_10259432	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1160	Open in IMG/M
3300012685\|Ga0137397_10000439	All Organisms → cellular organisms → Bacteria	28838	Open in IMG/M
3300012685\|Ga0137397_10775435	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	711	Open in IMG/M
3300012918\|Ga0137396_10092222	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300012924\|Ga0137413_10850279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	705	Open in IMG/M
3300012925\|Ga0137419_10010156	All Organisms → cellular organisms → Bacteria	5050	Open in IMG/M
3300012927\|Ga0137416_10283625	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300012927\|Ga0137416_10363417	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1217	Open in IMG/M
3300012944\|Ga0137410_10026283	All Organisms → cellular organisms → Bacteria	4041	Open in IMG/M
3300014873\|Ga0180066_1066376	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300014873\|Ga0180066_1131689	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300015054\|Ga0137420_1158867	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300015245\|Ga0137409_10000675	All Organisms → cellular organisms → Bacteria	37428	Open in IMG/M
3300017997\|Ga0184610_1002751	All Organisms → cellular organisms → Bacteria	3999	Open in IMG/M
3300018027\|Ga0184605_10274887	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	765	Open in IMG/M
3300018052\|Ga0184638_1001606	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6775	Open in IMG/M
3300018063\|Ga0184637_10402513	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300018482\|Ga0066669_10102555	All Organisms → cellular organisms → Bacteria	1991	Open in IMG/M
3300018482\|Ga0066669_10257086	All Organisms → cellular organisms → Bacteria	1385	Open in IMG/M
3300018482\|Ga0066669_10282200	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300019255\|Ga0184643_1039823	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1276	Open in IMG/M
3300019361\|Ga0173482_10438729	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	617	Open in IMG/M
3300020003\|Ga0193739_1000497	All Organisms → cellular organisms → Bacteria	10981	Open in IMG/M
3300020018\|Ga0193721_1101400	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	737	Open in IMG/M
3300020022\|Ga0193733_1164279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	592	Open in IMG/M
3300021081\|Ga0210379_10038855	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300021081\|Ga0210379_10203287	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	854	Open in IMG/M
3300021344\|Ga0193719_10025797	All Organisms → cellular organisms → Bacteria	2524	Open in IMG/M
3300024330\|Ga0137417_1143229	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	570	Open in IMG/M
3300025885\|Ga0207653_10042111	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300025912\|Ga0207707_11268610	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	593	Open in IMG/M
3300025917\|Ga0207660_10083038	All Organisms → cellular organisms → Bacteria	2358	Open in IMG/M
3300025917\|Ga0207660_10274943	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300025917\|Ga0207660_11066993	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	658	Open in IMG/M
3300025922\|Ga0207646_10004798	All Organisms → cellular organisms → Bacteria	14508	Open in IMG/M
3300026296\|Ga0209235_1032689	All Organisms → cellular organisms → Bacteria	2667	Open in IMG/M
3300026301\|Ga0209238_1155643	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	690	Open in IMG/M
3300026313\|Ga0209761_1001522	All Organisms → cellular organisms → Bacteria	15028	Open in IMG/M
3300026318\|Ga0209471_1225244	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	684	Open in IMG/M
3300026343\|Ga0209159_1076757	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1517	Open in IMG/M
3300026527\|Ga0209059_1054641	All Organisms → cellular organisms → Bacteria	1750	Open in IMG/M
3300027266\|Ga0209215_1001730	All Organisms → cellular organisms → Bacteria	2266	Open in IMG/M
3300027573\|Ga0208454_1028931	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1299	Open in IMG/M
3300027643\|Ga0209076_1167604	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	610	Open in IMG/M
3300027655\|Ga0209388_1035354	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300027857\|Ga0209166_10001895	All Organisms → cellular organisms → Bacteria	16608	Open in IMG/M
3300027875\|Ga0209283_10012346	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5092	Open in IMG/M
3300027903\|Ga0209488_10001996	All Organisms → cellular organisms → Bacteria	17169	Open in IMG/M
3300027903\|Ga0209488_10690910	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	732	Open in IMG/M
3300027909\|Ga0209382_10282010	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300027909\|Ga0209382_10362115	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300027909\|Ga0209382_11134130	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	805	Open in IMG/M
3300027961\|Ga0209853_1077054	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	877	Open in IMG/M
3300028380\|Ga0268265_11330563	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	719	Open in IMG/M
3300028536\|Ga0137415_10141388	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2246	Open in IMG/M
3300028828\|Ga0307312_10048793	All Organisms → cellular organisms → Bacteria	2523	Open in IMG/M
3300030997\|Ga0073997_10825384	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	689	Open in IMG/M
3300031199\|Ga0307495_10001035	All Organisms → cellular organisms → Bacteria	2780	Open in IMG/M
3300031226\|Ga0307497_10002893	All Organisms → cellular organisms → Bacteria → Proteobacteria	4420	Open in IMG/M
3300031716\|Ga0310813_10272138	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300031720\|Ga0307469_10213420	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300031740\|Ga0307468_101117966	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	703	Open in IMG/M
3300031820\|Ga0307473_10004902	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4247	Open in IMG/M
3300031820\|Ga0307473_10191031	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300031892\|Ga0310893_10482790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	554	Open in IMG/M
3300033407\|Ga0214472_10249469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1702	Open in IMG/M
3300033811\|Ga0364924_126190	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	593	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.01%
Host-Associated	Host-Associated	13.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.62%
Plants	Host-Associated → Plants	13.99%
Aquatic	Environmental → Aquatic	8.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.89%
Sediment	Environmental → Aquatic → Sediment	6.29%
Freshwater	Environmental → Aquatic → Freshwater	2.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.10%
Floodplain	Environmental → Terrestrial → Floodplain	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.14%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.70%
Sand	Environmental → Terrestrial → Soil → Sand	0.70%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.29%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.10%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.40%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.70%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.29%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.59%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.10%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.10%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.40%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.70%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.70%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.70%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_106370692	3300001661	Forest Soil	MFFWSCEARSPVDYMLLVTAASSWVYAAWCLIQLRFERRRPLVWWEPVPLGSTDLTPLGREYHRRFFLSLLVGACAILLA
C688J18823_102533143	3300001686	Soil	MKRNYGGMFFWNCEAANPFDYALIVTTGTAWVYAAWCLIQLRFERRSPLVWWEPVPFGNTDLTPRGRDYHRRFFGALLTGACAMLVAVALCAGR*
JGI25382J37095_100837872	3300002562	Grasslands Soil	MFFWNCEARSPVDYALLVIAASSWVYAAWCLIQLRYERRRPLVWWEPVPLGSTDLTPQGREYHRRFFLSLLSGACAILLAVALCASR*
JGI25382J37095_100971121	3300002562	Grasslands Soil	MLFWNCEASSPIDYLLLVVAATSWVYATWCLIQLRYERRTPLIWWEPVPFSSSDLTAVGREYHRRFFLAGLAGACAILLAVALCASR*
soilL2_100341803	3300003319	Sugarcane Root And Bulk Soil	MFFWNCEAASPVDYLLLVIASTAWIYAAWCLIQLRYERRRPLVWWEPVPFESTDLTPLGREYHRRFFWSFLAGACAICLAVALCASR*
soilL2_101108183	3300003319	Sugarcane Root And Bulk Soil	MFFWNCEAASPVDYLLLVIASTAWVYAAWCLIQLRYERRRPLVWWEPVPFFDSSDLTPVGRDYHRRFFYAVLVGACAICLAVALCASR*
soilL2_101995642	3300003319	Sugarcane Root And Bulk Soil	MFFWNCEAASPVDYLLLVVASTAWIYAAWCLIQLRYERRRPLVWWEPVPFESSDLTPAGREYQRRFFWSVLAGACAICLAVALCASR*
Ga0062593_1010311532	3300004114	Soil	MFFWNCEAASPVDYLLLVSASTAWIYAAWCLIQLRYERRRPLVWWEPVPFDNSDLTPLGRDYQRRFFFSLFAGACAILLAVALCASR*
Ga0063356_1001431773	3300004463	Arabidopsis Thaliana Rhizosphere	MFFWNCEAASPVDYLLLVVASTAWIYAAWCLIQLRYERRRPLVWWEPVPFDSRDLTPLGRDYYRRFFFSFLTGACTICLAVALCASR*
Ga0062595_1000356513	3300004479	Soil	MFFWNCEARSPVDYLVLTVAASAWVYAVWCLIQMRYERRTPLTWWEPVPFSNSELTPAGREYHRRFFIAVLAGACGFMLAVALCAGR*
Ga0066674_100878741	3300005166	Soil	MRNVAPMFFWNCEASSPVDYALIMMAATSWIYAAWCLIQLRYERRSPLIWWEPVPFGIADLTPRGREYHRRFFLSALAGTCVLLLAVAICASR*
Ga0066677_100639163	3300005171	Soil	MFFWNCEARSPVDYTLLVVAASSWVYAAWCLIQLRFERRRPLVWWEPVPLGSTDLTPAGREYHRRFFLSLLTGACAILLAVALCASR*
Ga0066679_102143762	3300005176	Soil	MFFWNCEARSPIDYTLLVIAASSWVYAAWCLIQLRFERRRPLVWWEPVPLGSTDLTPAGREYHRRFFLSLLTGACAILLAVALCASR*
Ga0066671_100358563	3300005184	Soil	MFFFNCEVRSPVDYVLLTLAASAWIYAAWCLIQLRFERRTPLVWWEPVPFSNTDLTPAGRDYHRRFFIALVAGASALLFAVALCASR*
Ga0070680_1000140126	3300005336	Corn Rhizosphere	MFFWNCEAVSPFDYALIVTTGTAWVYAAWCLIQLRYERRSPLIWWEPVPLGNTDLTPRGRDYHRRFFVAVLMGTCAMLFAVALCAGR*
Ga0070680_1001294493	3300005336	Corn Rhizosphere	MFFWNCEAASPVDYLMLVIASTAWIYAAWCLIQLRYERRRPLVWWEPVPFDNTDLTPVGREYHRRFFMSLFAGACGILIAVALCASR*
Ga0070680_1005589172	3300005336	Corn Rhizosphere	MFLLNCEARSPFDYLLLVLAASSWVYAAYCLIELRYERRRPLVWWEPVPFDRSDLTPRGREYQRRFYICLLAGAVALMLAVALCSTR*
Ga0070691_102641381	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MFFWNCEAASPVDYLLLVSASTAWIYAAWCLIQLRYERRRPLVWWEPVPFDNSDLTPLGREYHRRFFFSLFAGACAILLVVALCASR*
Ga0070705_1009747872	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MFFWNCEAASPVDYLLLVIASSAWIYAAWCLIQLRYERRRPLVWWEPVPFDNSDLTPLGRDYQRRFFFSLFAGACAILLAVALCASR*
Ga0070694_1000019328	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MFFWNCEASSPIDYALLVVAATAWVYATWCLIQLRYERSTPLVWWEPVPFSTGDLTALGREYRRRFFFAALAGACAILLAVALCAAR*
Ga0070694_1002740852	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MFFWSCEAASPVDYALLMIASTAWIYTAWCLIQLRYERRRPLVWWEPVPLSSTDLTPLGREYHRRFFISLVAGACAILLAVALCASR*
Ga0070694_1006052591	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MFFWNCEARSPIDYTLLVIAASSWVYAAWCLIQLRYERRRPLVWWEPVPLGNSDLTPAGREYHRRFFLSLIVGA
Ga0066681_100366395	3300005451	Soil	MFFWNCEALSPFDYVSLVLAGAGWVYASYCLIQLRYERRSPLLWWEPVPFGSSGLTPLGKEYQRRFFLSFMIGACALMLAVALCASR*
Ga0070707_1004535913	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MFFWNCEAVSPFDYALIVTTGTAWVYAAWCLIQLRYERRSPLIWWEPVPLGNTDLTPRGRDYHRRFFVAVLMGTCAMLFAV
Ga0073909_101977572	3300005526	Surface Soil	MFFWNCEAASPVDYLLLVIASTAWIYAAWCLIQLRYERRRPLVWWEPVPFDSSDLTPLGRDYYRRFFFSFLAGACTICLAVALCACR*
Ga0070679_1011606352	3300005530	Corn Rhizosphere	MFFWNCEAASPVDYLMLVIASTAWIYAAWCLIQLRYERRRPLVWWEPVPFDNTDLTPVGREYHRRFFMSLFAGACGILIA
Ga0070697_1007589032	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MFFWNCEARSPIDYTLLVIAASSWVYAAWCLIQLRYERRRPLVWWEPVPLGNSDLTPVGREYHRRFFLSLLVGACAMMLAVALCANR*
Ga0070730_1000066724	3300005537	Surface Soil	MYFWNCEVRSPIDYLLLVTSASAWVYATWCLIQMRYERRTPLVWWEPVPFSSSDLTTTGREYHRRFFIALLAGACAILLAVALCASRQ*
Ga0066692_107812722	3300005555	Soil	MFFWNCEAASPVDYALLVIAATTWVYAAWCLIQLRYERRRPLVWWEPVPLSSTDLTPLGREYHRRFFLSLLTGACAILLAVALCASR*
Ga0066670_108062202	3300005560	Soil	FFFNCEVRSPVDYVLLTLAASAWIYAAWCLIQLRFERRTPLVWWEPVPFSNTDLTPAGRDYHRRFFIALVAGASALLFAVALCASR*
Ga0066693_100763701	3300005566	Soil	ALIFCTMFFFNCEVRSPIDYVLLTLAASAWIYAAWCLIQLRFERRTPLVWWEPVPFSNTDLTPAGRDYHRRFFIALVAGASALLFAVALCASR*
Ga0066708_110404792	3300005576	Soil	MFFWNCEARSPVDYTLLVIAASSWVYAAWCLIQLRFERRRPLVWWEPVPLGSTDLTPAGREYHRRFFLSLLTGACAILLAVALCASR*
Ga0066905_10000060610	3300005713	Tropical Forest Soil	MFFWNCEASTPVDYALIVIAATGWVYAAWCLIQLRYERRSPLVWWEPVPFGNADLTPRGRDYHRRFFLSVLAGTCALLMAVALCAGR*
Ga0075277_10043751	3300005895	Rice Paddy Soil	MFFFNCEVRSPIDYVLLTVSASAWIYAAWCLIQLRYERRTPLVWWEPVPFSSADLTPIGRDYQRRFFIALLAGASALLLAVALCASR*
Ga0066651_100050323	3300006031	Soil	MFFWNCEAASPVDYALLLTTATAWIYAAWCLIQMRYERRTPLVWWEPVPLSSADLTTTGREYQRRFFFSLLAGACAILSAVALCASR*
Ga0066653_102243532	3300006791	Soil	MFFWNCEAANPFDYALIVTTGTAWVYAAWCLIQLRFEHRSPLVWWEPVPFGNADLTPRGRDYHRRFFGALLTGACAILVAVALCAGR*
Ga0075428_1000565463	3300006844	Populus Rhizosphere	MFFWNCEASTPVDYALIVIAATGWVYAAWCLIQLRYERRSPLVWWEPVPFENADLTPRGREYHRRFFLSVFAGTCCLLLAVALCAGR*
Ga0075421_1002229022	3300006845	Populus Rhizosphere	MSFWNCEAASPVDYVLLVAAATAWIYGAWCLIQLRYERRTPLVWWEPVPFTTTDLTSLGRDYYRRFFFSVLVGACGILFAVALCASR*
Ga0075421_1008459753	3300006845	Populus Rhizosphere	MFFWNCEASSPFDYLLIVIAATGWIYAAWCLIQLRYERRAPLVWWEPVPLGVTDLTPRGREYHWRFFLSVLAGTCALLLAVALCASR*
Ga0075431_1005364551	3300006847	Populus Rhizosphere	WNCEASTPVDYALIVIAATGWVYAAWCLIQLRYERRSPLVWWEPVPFENADLTPRGREYHRRFFLSVFAGTCCLLLAVALCAGR*
Ga0075433_101013812	3300006852	Populus Rhizosphere	MFFWNCEASSPMDYALLVVAATAWVYATWCLIQLRYERSTPLVWWEPVPFSTGDLTALGREYRRRFFFAASAGACAILLAVALCASR*
Ga0075433_104167692	3300006852	Populus Rhizosphere	MFFWNCEASSPVDYALIVITATSWISAAWCMIQLRYERRSPLIWWEPVPFGSADLTPRGREYHRRFFGSVLAGTCALLLAVALCASR*
Ga0075425_1001475583	3300006854	Populus Rhizosphere	MFFWNCEAASPVDYALLAISATSWIYAAWCLIQMRYERRTPLVWWEPVPLSSNDLTTTGREYHRRFFFSLLVGACAILLAVALCASR*
Ga0075425_1021184291	3300006854	Populus Rhizosphere	MFFWNCEASSPVDYALIVITATSWISAAWCMIQLRYERRSPLIWWEPVPFGSADLTPRGREYHRRFFGSVLAGTCALLLAVALC
Ga0075436_1007453212	3300006914	Populus Rhizosphere	MFFWNCEASSPMDYALLVVAATAWVYATWCLIQLRYERSTPLVWWEPVPFSTGDLTALGREYRRRFFFAALAGACAILLAVALCASR*
Ga0079218_120331701	3300007004	Agricultural Soil	RVYLEPMFFWNCEAASPIDYLVLMIASTAWIYAAWCLIQLRYERRRPLVWWEPVPFSSTDLTPLGRDYHRRFFISLLAGACAILFAVALCASR*
Ga0099791_100115813	3300007255	Vadose Zone Soil	MFFWNCEAASPVDYALLVIAATAWVYAAWCMIQLRYERRRPLVWWEPVPLSSTDLTPLGREYHRRFFLALPAGACAILLAVALCASR*
Ga0099793_100060993	3300007258	Vadose Zone Soil	MFFWNCEAQSPFDYLLLVTAASGWIYAAWCLIQLRYERRTPLVWWEPVPFSSTDLTPSGREYHRRFFLSVLVGACAILLAVAFCASR*
Ga0099793_101981702	3300007258	Vadose Zone Soil	MFFWNCEARSPVDYALLVIAASSWVYAAWCLIQLRFERRRPLVWWEPVPLGSTDLTPLGREYHRRFFLSLLTGACAILLAVALCASR*
Ga0066710_1020390942	3300009012	Grasslands Soil	MFFWNCEASSPVDYALIMMAATSWIYAVWCLIQLRYERRSPLIWWEPVPFGIADLTPRGREYHRRFFLSALAGTCVLLLAVAICASR
Ga0066710_1028685282	3300009012	Grasslands Soil	MFFWNCEAASPVDYALLVIAATTWVYAAWCLIQLRYERRRPLVWWEPVPLSSTDLTPLGREYHRRFFLSLLTGACAILLAVALCASR
Ga0099828_100019134	3300009089	Vadose Zone Soil	MFFWNCEAASPVDYALLVIAATAWVYAAWCLIQLRYERGRPLVWWEPVPLSNTDLTPLGREYHRRFFLALLAGACAILLAVALCASR*
Ga0066709_1003851963	3300009137	Grasslands Soil	MRNVAPMFFWNCEASSPVDYALIMMAATSWIYAVWCLIQLRYERRSPLIWWEPVPFGIADLTPRGREYHRRFFLSALAGTCVLLLAVAICASR*
Ga0099792_100162153	3300009143	Vadose Zone Soil	MFFWNCEARSPLDYTLLVIAATSWVYAAWCLIQLRYERRRSLVWWEPVPLGGSDLTPLGREYRRRFFLSLFVGACAILLAVALCASR*
Ga0099792_105022552	3300009143	Vadose Zone Soil	MFFWNCEARSPLDYTLLVVAATSWVYSAWCLIQLRYERRRSLVWWEPVPLGSSDLTPLGREYRRRFFLSLFVGACAILLAVALCAGR*
Ga0111538_116646891	3300009156	Populus Rhizosphere	MFFWNCEAASPVDYLLLVSASTASIYAAWCLIQLRYERRRPLVWWEPVPFDNSDLTPLGREYQRRFFFSLFAGACAILLAVAL
Ga0075423_123862972	3300009162	Populus Rhizosphere	EASSPVDYALIVITATSWISAAWCMIQLRYERRSPLIWWEPVPFGSADLTPRGREYHRRFFGSVLAGTCALLLAVALCASR*
Ga0105242_119695292	3300009176	Miscanthus Rhizosphere	MFFWNCEAASPVDYLLLVIASSAWIYAAWCLIQLRYERRRPLVWWEPVPFDNSDLTPLGRDYQRRFFFSLFAGACAILLVVALCASR*
Ga0105252_100574212	3300009678	Soil	MFFWNCETASPVDYVLLMIACTAWIYAAWCLIQLRYERRRPLVWWEPVPLSSTDLTPLGREYHRRFFISLVAGACAILLAVALCASR*
Ga0134086_100166021	3300010323	Grasslands Soil	TCRPFPFALVTGAVMRNVAPMFFWNCEASSPVDYALIMMAATSWIYAAWCLIQLRYERRSPLIWWEPVPFGIADLTPRGREYHRRFFLSALAGTCVLLLAVAICASR*
Ga0134066_102790262	3300010364	Grasslands Soil	MFFWNCEAASPGDYALLVIAATSWVYAAWCLIQLRYERRRPLVWWEPVPLGSTDLTPAGREYHRRFFLSLLTGACAILLAVALCASR*
Ga0134121_103263822	3300010401	Terrestrial Soil	MFFWNCEAASPFDYLLLVIASSAWIYAAWCLIQLRYERRRPLVWWEPVPFDNSDLTPLGRDYQRRFFFSLFAGACAILLAVALCASR*
Ga0137391_100248273	3300011270	Vadose Zone Soil	MFFWNCEAASPVDYALLVIAATAWVYAAWCLIQLRYERRRPLVWWEPVPLSNTDLTPLGREYHRRFFLALLAGACAILLAVALCASR*
Ga0137457_10605392	3300011443	Soil	MFFWNCEASSPFDYALLVVAATCWVYAAYCLIQLRYERRTPLIWWEPVPFSNADLTPQGRDYQRRFFFSILAGVSAFLLAVAFCASR*
Ga0137388_100956951	3300012189	Vadose Zone Soil	MFFWNCEARSPVDYALLVIAASSWVYAAWCLIQLRYERRRPLVWWEPVPLGSTDLTPQGREFHRRFFLSLLTGACAILL
Ga0137364_100372862	3300012198	Vadose Zone Soil	MFFWKCEARSPIDYVLLVVAASGWIYAAWCQIQMRYERRTPLVWWEPVPFSSGDLTTLGREYHRRFFLALLLGACAILLAVALCASR*
Ga0137364_106050883	3300012198	Vadose Zone Soil	NVAPMFFWNCEASSPVDYALIMMAATSWIYAAWCLIQLRYERRSPLIWWEPVPFGIADLTPRGREYHRRFFLSALAGTCVLLLAVAICASR*
Ga0137399_102636952	3300012203	Vadose Zone Soil	MFFWNCEARSPVDYALLVIAASSWVYAAWCLIQLRFERRRPLVWWEPVPLGSTDLTPLGREYHRRFFLSLLTGACAILLAVAFCASR*
Ga0137399_105437891	3300012203	Vadose Zone Soil	MFFWNCEARSPVDYALLVTAASSWVYAAWCLIQLRFERRRPLVWWEPVPLGSTDLTPLGRDYHRRFFLSLLTGACAILLAVALCASR*
Ga0150985_1148142673	3300012212	Avena Fatua Rhizosphere	MKRNYGGMFFWNCEAANPFDYALIVTTGTAWVYAAWCLIQLRFERRSPLVWWEPVPFGNADLTPRGRDYHRRFFGALLTGACAMLVAVALCAGR*
Ga0137370_100047571	3300012285	Vadose Zone Soil	MFFWNCEALSPFDYMSLVLAGAGWVYASYCLIQLRYERRAPLLWWEPVPFGSSGLTPLGKEYQRRFFLSFMIGACALMLAVALCASR*
Ga0137370_101055342	3300012285	Vadose Zone Soil	MFFFNCEVRSPIDYVLLTLGASAWIYAAWCLIQLRYERRTPLVWWEPVPFSNADLTPAGRDYHRRFFVALLAGASALLFAVALCASR*
Ga0137386_105639362	3300012351	Vadose Zone Soil	MLFWNCEASSPIDYLLLVVAATSWVYATWCLIQLRYERRTPLIWWEPVPFSSSDLTAVGREYHRRFFLAGRAGACAILLAVAL
Ga0137390_118217681	3300012363	Vadose Zone Soil	MFFWNCEAASPVDYALLVIAATGWVYAAWCLIQLRYERRRPLVWWEPVPLSNTDLTPLGREYHRRFFLALLAGACAILLAVALCASR*
Ga0150984_1023077831	3300012469	Avena Fatua Rhizosphere	CEAANPFDYALIVTTGTAWVYAAWCLIQLRFERRSPLVWWEPVPFGNADLTPRGRDYHRRFFGALLTGACAILVAVALCAGR*
Ga0150984_1102638411	3300012469	Avena Fatua Rhizosphere	VRSPIDYVLLTLAASAWIYAAWCLIQLRFERRTPLVWWEPVPFSSADLTPAGRDYHRRFFLSLVAGASALLFAVALCASR*
Ga0137398_102594321	3300012683	Vadose Zone Soil	MLFWKCEVRSPIDYLLLVVAASGWIYAVWCLIQMRYERRTPLVWWEPVPFSSGDLTTSGREYHRRFFLSLLLGACAILLAVALCASR*
Ga0137397_1000043915	3300012685	Vadose Zone Soil	MFFWHCEARSPVDYALLVIAASSWVYAAWCLIQLRFERRRPLVWWEPVPLGSTDLTPLGREYHRRFFLSLLTGACAILLAVALCASR*
Ga0137397_107754351	3300012685	Vadose Zone Soil	MLFWKCEVRSPIDYLLLVVAASGWIYAAWCLIQMRYERRTPLVWWEPVPLSSGDLTTSGREYHRRFFLSLLLGACAILLAVALCASR*
Ga0137396_100922222	3300012918	Vadose Zone Soil	MFFWNCEARSPVDYALLVIGASSWVYAAWCLIQLRFERRRPLVWWEPVPLGSTDLTPLGREYHRRFFLSLLTGACAILLAVALCASR*
Ga0137413_108502792	3300012924	Vadose Zone Soil	MLFWKCEVRSPIDYLLLVVAASGWIYAAWCLIQMRYERRTPLVWWEPVPFSSGDLTTSGREYHRRFFLSLLLGACAILLAVALCASR*
Ga0137419_100101564	3300012925	Vadose Zone Soil	MFFWHCEARSPVDYALLVIAASSWVYAAWCLIQLRFERRRPLVWWEPVPLGSTDLTPLGREYHRRFFLSLLTGACAILLAVAFCASR*
Ga0137416_102836251	3300012927	Vadose Zone Soil	MFFWNCEARSPVDYALLVTAASSWVYAAWCLIQLRFERRRPLVWWEPVPLGSTDLTPLGRGYHRRFFLSLLTGACAILLAVALCASR*
Ga0137416_103634172	3300012927	Vadose Zone Soil	MFFWNCEAASPVDYALLVIAATTWVYAAWCLIQLRYERRRPLVWWEPVPLSSTDLTPLGREYHRRFFLSLVAGACAILLAVALCASR*
Ga0137410_100262834	3300012944	Vadose Zone Soil	MFFWHCEARSPVDYALLVIAASSWVYAAWCLIQLRFERRRPLVWWEPVPLGCTDLTPLGREYHRRFFLSLLTGACAILLAVALCASR*
Ga0180066_10663762	3300014873	Soil	MFFWSCEAASPVDYALLMVAATAWIYAAWCLIQLRYERGTPLVWWEPVPFSSSDLTSLGREYHRRFFVSVLAGACAILLAVALCARR*
Ga0180066_11316891	3300014873	Soil	MFFWNCEASSPFDYALLVIAATCWVYAAYCLIQLRYERRTPLIWWEPVPLNRTDLTPLGRDFQRRFFFSILAG
Ga0137420_11588671	3300015054	Vadose Zone Soil	MFFWNCEAQSPFDYLLLVTAASGWIYAAWCLIQLRYERRTPLVWWEPVPFSSTDLTPSGREYHRRFFLSVLVGACAILLAVAFCASRSVSRHVVA
Ga0137409_1000067524	3300015245	Vadose Zone Soil	MFFWNCEAQSPFDYLLLVTAGSGWIYAAWCLIQLRYERRTPLVWWEPVPFSSTDLTPSGREYHRRFFLSVLVGACAILLAVAFCASR*
Ga0184610_10027513	3300017997	Groundwater Sediment	MLFWNCEAASPVDYALLVIAATAWIYAAWCAIQLRYERRTPLVWWEPVPFSSSDLTSLGRDYHRRFFVSLLAGACAILFAVALCASR
Ga0184605_102748872	3300018027	Groundwater Sediment	ARSPVDYTLLVVAASSWVYAAWCLIQLRYERRRPLVWWEPVPLGSTDLTPLGREYHRRFFFSLLVGACAIMLAVALCASR
Ga0184638_10016063	3300018052	Groundwater Sediment	MFFWSCEAASPVDYALLMVAATAWIYAAWCLIQLRYERGTPLVWWEPVPFSNGDLTSLGREYHRRFFVSVLAGACAILLAVALCASR
Ga0184637_104025132	3300018063	Groundwater Sediment	MLFWNCEAASPVDYALLVIAATAWIYAAWCAIQLRYERRTPLVWWEPVPFSSSDLTSLGREYHRRFLFSLLAGACAILLAVALCASR
Ga0066669_101025552	3300018482	Grasslands Soil	MFFFNCEVRSPVDYVLLTLAASAWIYAAWCLIQLRFERRTPLVWWEPVPFSNTDLTPAGRDYHRRFFIALVAGASALLFAVALCASR
Ga0066669_102570862	3300018482	Grasslands Soil	MRNVAPMFFWNCEASSPVDYALIMMAATSWIYAAWCLIQLRYERRSPLIWWEPVPFGIADLTPRGREYHRRFFLSALAGTCVLLLAVAICASR
Ga0066669_102822002	3300018482	Grasslands Soil	MFFWNCEAASPVDYALLLTTATAWIYAAWCLIQMRYERRTPLVWWEPVPLSSADLTTTGREYQRRFFFSLLAGACAILSAVALCASR
Ga0184643_10398232	3300019255	Groundwater Sediment	MFFWNCEAASPVDYALLVTAASSWVYASWCLIQLRFERRRPLVWWEPVPLGSTDLTPLGREYHRRFFVSLLVGACAILLAVALCASR
Ga0173482_104387292	3300019361	Soil	MFFWNCEAASPVDYLLLVSASTAWIYAAWCLIQLRYERRRPLVWWEPVPFDNSDLTPLGRDYQRRFFFSLFAGACAILLAVALCASR
Ga0193739_10004975	3300020003	Soil	MFLWNCEASSPIDYALLVTAATAWIYAAWCLIQLRYERRTPLVWWEPVPFSSSDLTSLGRDYHRRFFVSLLAGACAILFAVALCASR
Ga0193721_11014002	3300020018	Soil	MFFWHCEVRSPVDYLLLVIAASAWVYAAWCLIQLRYERRRPLVWWEPVPLGNTDLTPLGREYHRRFFLSLLAGACALMLAVALCAAR
Ga0193733_11642792	3300020022	Soil	MFFWNCEARSPVDYALLVTAASSWVYAAWCLIQLRYERRRPLVWWEPVPLGSTDLTPLGRDYHRRFFLSLLTGACAILLAVALCASR
Ga0210379_100388551	3300021081	Groundwater Sediment	MFFWTCEVASPIDYVLLVVTATAWIYAAWCLIQLRYERRTPLVWWEPVPFTSTDLTTLGREYHRRFFWSLLAGSCAILLAVALCASR
Ga0210379_102032872	3300021081	Groundwater Sediment	KGRVYFVPMFFWSCEAASPVDYALLMVAATAWIYAAWCLIQLRYERGTPLVWWEPVPFSSSDLTSLGREYHRRFFVSVLAGACAILLAVALCASR
Ga0193719_100257973	3300021344	Soil	MFFWNCEVRSPVDYLLLVIAASAWVYAAWCLIQLRYERRRPLVWWEPVPLGNSDLTPVGREYHRRFFLSLIVGACALMLAVALCASR
Ga0137417_11432292	3300024330	Vadose Zone Soil	MFFWNCEAQSPFDYLLLVTAASGWIYAAWCLIQLRYERRTPLVWWEPVPFSSTDLTPSGREYHRRFFLSVLVGACAILLAVAFCASR
Ga0207653_100421113	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MFFWNCEAASPVDYLLLVIASSAWIYAAWCLIQLRYERRRPLVWWEPVPFDNSDLTPLGRDYQRRFFFSLFAGACAILLAVALCASR
Ga0207707_112686102	3300025912	Corn Rhizosphere	MFFWNCEAASPVDYLMLDIASTAWIYAAWCLIQLRYERRRPLVWWEPVPFDNTDLTPVGREYHRRFFMSLFAGACGILIAVALCASR
Ga0207660_100830382	3300025917	Corn Rhizosphere	MFFWNCEAASPVDYLMLVIASTAWIYAAWCLIQLRYERRRPLVWWEPVPFDNTDLTPVGREYHRRFFMSLFAGACGILIAVALCASR
Ga0207660_102749432	3300025917	Corn Rhizosphere	MFFWNCEAVSPFDYALIVTTGTAWVYAAWCLIQLRYERRSPLIWWEPVPLGNTDLTPRGRDYHRRFFVAVLMGTCAMLFAVALCAGR
Ga0207660_110669932	3300025917	Corn Rhizosphere	MFLLNCEARSPFDYLLLVLAASSWVYAAYCLIELRYERRRPLVWWEPVPFDRSDLTPRGREYQRRFYICLLAGAVALMLAVALCSTR
Ga0207646_100047988	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MFFWNCEASSPIDYALLVVAATAWVYATWCLIQLRYERSTPLVWWEPVPFSTGDLTALGREYRRRFFFAALAGACAILLAVALCAAR
Ga0209235_10326892	3300026296	Grasslands Soil	MLFWNCEASSPIDYLLLVVAATSWVYATWCLIQLRYERRTPLIWWEPVPFSSSDLTAVGREYHRRFFLAGLAGACAILLAVALCASR
Ga0209238_11556431	3300026301	Grasslands Soil	MFFWNCEALSPFDYVSLVLAGAGWVYASYCLIQLRYERRSPLLWWEPVPFGSSGLTPLGKEYQRRFFLSFMIGACALM
Ga0209761_100152211	3300026313	Grasslands Soil	MLFWNCEASSPIDYLLLVVAATSWVYATWCLIQLRYERRTPLIWWEPVPFSSIDLTAVGREYHRRFFLAGLAGACAILLAVALCASR
Ga0209471_12252441	3300026318	Soil	PIDYTLLVIAASSWVYAAWCLIQLRFERRRPLVWWEPVPLGSTDLTPAGREYHRRFFLSLLTGACAILLAVALCASR
Ga0209159_10767571	3300026343	Soil	LIMMAATSWIYAAWCLIQLRYERRSPLIWWEPVPFGIADLTPRGREYHRRFFLSALAGTCVLLLAVAICASR
Ga0209059_10546413	3300026527	Soil	MFFWNCEARSPIDYTLLVIAASSWVYAAWCLIQLRFERRRPLVWWEPVPLGSTDLTPAGREYHRRFFLSLLTGACAILLAVALCASR
Ga0209215_10017303	3300027266	Forest Soil	MFFWNCEAASPVDYVLLMVACTAWIYAAWCLIQLRYERRRPLIWWEPVPFSNTDLTPLGRDYHRRFFISLVAGAGAILLAVALCASR
Ga0208454_10289312	3300027573	Soil	MFFWNCETASPVDYVLLMIACTAWIYAAWCLIQLRYERRRPLVWWEPVPLSSTDLTPLGREYHRRFFISLVAGACAILLAVALCASR
Ga0209076_11676041	3300027643	Vadose Zone Soil	MFFWNCEARSPVDYALLVIAASSWVYAAWCLIQLRFERRRPLVWWEPVPLGSTDLTPLGREYHRRFFLSLLTGACAILLAVAFCASR
Ga0209388_10353542	3300027655	Vadose Zone Soil	MFFWNCEAASPVDYALLVIAATAWVYAAWCMIQLRYERRRPLVWWEPVPLSSTDLTPLGREYHRRFFLALPAGACAILLAVALCASR
Ga0209166_1000189515	3300027857	Surface Soil	MYFWNCEVRSPIDYLLLVTSASAWVYATWCLIQMRYERRTPLVWWEPVPFSSSDLTTTGREYHRRFFIALLAGACAILLAVALCASRQ
Ga0209283_100123464	3300027875	Vadose Zone Soil	MFFWNCEAASPVDYALLVIAATAWVYAAWCLIQLRYERGRPLVWWEPVPLSNTDLTPLGREYHRRFFLALLAGACAILLAVALCASR
Ga0209488_1000199612	3300027903	Vadose Zone Soil	MFFWNCEARSPLDYTLLVIAATSWVYAAWCLIQLRYERRRSLVWWEPVPLGGSDLTPLGREYRRRFFLSLFVGACAILLAVALCASR
Ga0209488_106909102	3300027903	Vadose Zone Soil	MFFWNCEARSPLDYTLLVVAATSWVYSAWCLIQLRYERRRSLVWWEPVPLGSSDLTPLGREYRRRFFLSLFVGACAILLAVALCAGR
Ga0209382_102820103	3300027909	Populus Rhizosphere	MFFWNCEASTPVDYALIVIAATGWVYAAWCLIQLRYERRSPLVWWEPVPFENADLTPRGREYHRRFFLSVFAGTCCLLLAVALCAGR
Ga0209382_103621153	3300027909	Populus Rhizosphere	MFFWNCEASSPFDYLLIVIAATGWIYAAWCLIQLRYERRAPLVWWEPVPLGVTDLTPRGREYHWRFFLSVLAGTCALLLAVALCASR
Ga0209382_111341301	3300027909	Populus Rhizosphere	LLVAAATAWIYGAWCLIQLRYERRTPLVWWEPVPFTTTDLTSLGRDYYRRFFFSVLVGACGILFAVALCASR
Ga0209853_10770542	3300027961	Groundwater Sand	MLFWNCEVSSPVDYALLAIAATAWIYTAWCAIQLRYERRTPLVWWEPVPFSSSDLTSLGREYHRRFFFSLLAG
Ga0268265_113305632	3300028380	Switchgrass Rhizosphere	MFFWNCEAASPVDYLLLVSASTAWIYAAWCLIQLRYERRRPLVWWEPVPFDNSDLTPLGRDYQRRFFFSLFAGACAILLAVA
Ga0137415_101413883	3300028536	Vadose Zone Soil	MFFWNCEAASPVDYALLVIAATAWVYAAWCMIQLRYERRRPLVWWEPVPLSSTDLTPLGREYHRRFFLSLVAGACAILLAVALCASR
Ga0307312_100487931	3300028828	Soil	CSRSGKLVTMFFWHCEVRSPVDYLLLVIAASAWVYAAWCLIQLRYERRRPLVWWEPVPLGNTDLTPLGREYHRRFFLSLLAGACALMLAVALCAAR
Ga0073997_108253842	3300030997	Soil	MFFWTCEASSPADYALLVTAASSWIYAAWCVIQLRYERRTPLVWWEPVPLSRTDLTPLGRDYQRRLFFSILAGLSAILLAVAFCASR
Ga0307495_100010352	3300031199	Soil	MFFWNCEAASPADYLLLVIASTAWIYAAWCLIQLRYERRRPLVWWEPVPFDSTDLTPLGRDYYRRFFFSFLTGACTIGLAVALCASR
Ga0307497_100028935	3300031226	Soil	MFFWNCEAASPIDYVLLMATSTAWIYAAWCLIQLRYERRRPLIWWEPVPFSNADLTPLGRDYHRRFFISLLAGACAILLAVALCASR
Ga0310813_102721382	3300031716	Soil	MFFWNCEARSPVDYLVLTVAASAWVYAVWCLIQMRYERRTPLTWWEPVPFSNSELTPAGREYHRRFFIAVLAGACGFMLAVALCAGR
Ga0307469_102134203	3300031720	Hardwood Forest Soil	MFFWNCEAVGPFDYALIVTTGTAWVYAAWCLIQLRYERRSPLIWWEPVPFGNTDLTPRGRDYHRRFFVAVLAGTCAMLFAVALCAGR
Ga0307468_1011179662	3300031740	Hardwood Forest Soil	FFWTCEVASPIDYVLLIIASSAWIYAAWCLIQLRYERRTPLVWWEPVPISNTTDLTQLGREYQRRFFLSVLAGACAILLAVALCASR
Ga0307473_100049023	3300031820	Hardwood Forest Soil	MFFWNCEASSPVDYALIAIAATSWISAAWCLIQLRYERRSPLTWWEPVPFGSADLTPRGREYHRRFFGSVLAGTCALLLAVALCASR
Ga0307473_101910312	3300031820	Hardwood Forest Soil	MFFWNCEAASPVDYALLIVAATSWVYAAWCLIQMRYERRTPLVWWEPVPFSNNDLTTTGRDYHRRFFFALLAGACAILLAVALCASR
Ga0310893_104827902	3300031892	Soil	MFFWNCEAASPVDYLLLVSASTAWIYAAWCLIQLRYERRRPLVWWEPVPFDNSDLTPLGREYQRRFFFSLFAGACAILLAVALCASR
Ga0214472_102494694	3300033407	Soil	MFFWNCEASSPADYTLLVIAATAWIYAAWCLIQLRYERRTPLVWWEPVPFSSTDLTSLGREYHRRFFLSLLAGACAILLAVALCASR
Ga0364924_126190_164_427	3300033811	Sediment	MFFWNCEASSPFDYALLVIAATCWVYAAYCLIQLRYERRTPLIWWEPVPLSRTDLTPLGRDYQRRFFFSMLAGVSAILLAVAFCASR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051840

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences