Metagenome / Metatranscriptome Family F051765

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051765
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	57 residues
Representative Sequence	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGA
Number of Associated Samples	94
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.28 %
% of genes near scaffold ends (potentially truncated)	95.80 %
% of genes from short scaffolds (< 2000 bps)	91.61 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.028 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.161 % of family members)
Environment Ontology (ENVO)	Unclassified (55.944 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 43.53% β-sheet: 0.00% Coil/Unstructured: 56.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF02668	TauD	20.98
PF04392	ABC_sub_bind	16.08
PF06808	DctM	4.20
PF03401	TctC	3.50
PF13472	Lipase_GDSL_2	3.50
PF00941	FAD_binding_5	2.10
PF04343	DUF488	1.40
PF08450	SGL	1.40
PF06500	FrsA-like	1.40
PF00293	NUDIX	0.70
PF01979	Amidohydro_1	0.70
PF06411	HdeA	0.70
PF12680	SnoaL_2	0.70
PF06439	3keto-disac_hyd	0.70
PF16868	NMT1_3	0.70
PF14067	LssY_C	0.70
PF01323	DSBA	0.70
PF00144	Beta-lactamase	0.70
PF01011	PQQ	0.70
PF01872	RibD_C	0.70
PF00512	HisKA	0.70
PF02518	HATPase_c	0.70
PF03109	ABC1	0.70
PF03450	CO_deh_flav_C	0.70
PF03807	F420_oxidored	0.70
PF13185	GAF_2	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	20.98
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	16.08
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.50
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	1.40
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	1.40
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	1.40
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.70
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.70
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.70
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.70
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.70
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.03 %
Unclassified	root	N/A	27.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.03 %
Unclassified	root	N/A	27.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.03 %
Unclassified	root	N/A	27.97 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.35 %
Unclassified	root	N/A	27.97 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.57 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.40 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.97 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.40 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.70 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.09 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.80 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.40 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.70 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.70 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.70 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Thioalkalivibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio	0.70 %
unclassified Comamonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae	0.70 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.70 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.70 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.09 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.40 %
Comamonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	0.70 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Thioalkalivibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio	0.70 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.70 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.09 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.40 %
Mesorhizobium sp. 131-2-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-1	0.70 %
Comamonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Thioalkalivibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio	0.70 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.70 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10038315	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10058252	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10085310	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1019746	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300004633\|Ga0066395_10188276	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300005332\|Ga0066388_100773622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-1	1556	Open in IMG/M
3300005332\|Ga0066388_103225383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	833	Open in IMG/M
3300005332\|Ga0066388_104597487	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005332\|Ga0066388_107787966	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005332\|Ga0066388_108432818	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300005363\|Ga0008090_10164450	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005363\|Ga0008090_10255422	Not Available	898	Open in IMG/M
3300005439\|Ga0070711_100444981	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300005467\|Ga0070706_100478644	All Organisms → cellular organisms → Bacteria → Proteobacteria	1158	Open in IMG/M
3300005713\|Ga0066905_101987061	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300005713\|Ga0066905_102226467	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005764\|Ga0066903_100803871	All Organisms → cellular organisms → Bacteria → Proteobacteria	1682	Open in IMG/M
3300005764\|Ga0066903_102461214	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300005764\|Ga0066903_102785882	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300005764\|Ga0066903_103150798	Not Available	892	Open in IMG/M
3300005764\|Ga0066903_105508410	Not Available	667	Open in IMG/M
3300006028\|Ga0070717_11836056	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300006852\|Ga0075433_10316640	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300010043\|Ga0126380_10846327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300010046\|Ga0126384_10429508	Not Available	1123	Open in IMG/M
3300010047\|Ga0126382_11878394	Not Available	566	Open in IMG/M
3300010048\|Ga0126373_10492740	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300010048\|Ga0126373_12696839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300010358\|Ga0126370_10793273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300010360\|Ga0126372_11469863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	716	Open in IMG/M
3300010361\|Ga0126378_10877444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1004	Open in IMG/M
3300010361\|Ga0126378_11396338	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300010361\|Ga0126378_13242720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	517	Open in IMG/M
3300010362\|Ga0126377_10631846	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300010366\|Ga0126379_10984348	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	948	Open in IMG/M
3300010376\|Ga0126381_100846642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1315	Open in IMG/M
3300010376\|Ga0126381_101035550	Not Available	1185	Open in IMG/M
3300010376\|Ga0126381_101517468	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300010376\|Ga0126381_103654168	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300010398\|Ga0126383_10074548	Not Available	2935	Open in IMG/M
3300010868\|Ga0124844_1028729	All Organisms → cellular organisms → Bacteria → Proteobacteria	1745	Open in IMG/M
3300012199\|Ga0137383_10430269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	967	Open in IMG/M
3300012205\|Ga0137362_10304711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1379	Open in IMG/M
3300012210\|Ga0137378_10538995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1075	Open in IMG/M
3300012211\|Ga0137377_11823323	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300012351\|Ga0137386_10358538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1049	Open in IMG/M
3300012357\|Ga0137384_10500261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	998	Open in IMG/M
3300012362\|Ga0137361_11698054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300012948\|Ga0126375_10053370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	2167	Open in IMG/M
3300012971\|Ga0126369_10514251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1257	Open in IMG/M
3300012989\|Ga0164305_11203561	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300016270\|Ga0182036_10003007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8169	Open in IMG/M
3300016270\|Ga0182036_10841322	Not Available	750	Open in IMG/M
3300016294\|Ga0182041_11556524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	610	Open in IMG/M
3300016319\|Ga0182033_10332186	All Organisms → cellular organisms → Bacteria → Proteobacteria	1265	Open in IMG/M
3300016319\|Ga0182033_10901187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	783	Open in IMG/M
3300016341\|Ga0182035_11455079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300016341\|Ga0182035_11589742	Not Available	589	Open in IMG/M
3300016357\|Ga0182032_10634591	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300016357\|Ga0182032_10921689	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300016404\|Ga0182037_11994161	Not Available	521	Open in IMG/M
3300020581\|Ga0210399_11191792	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300021171\|Ga0210405_10511773	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300021478\|Ga0210402_11564933	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300021560\|Ga0126371_10461837	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300021560\|Ga0126371_11940795	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300025922\|Ga0207646_10255976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1582	Open in IMG/M
3300025922\|Ga0207646_10775334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	855	Open in IMG/M
3300026496\|Ga0257157_1078793	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300026507\|Ga0257165_1049160	Not Available	757	Open in IMG/M
3300031544\|Ga0318534_10611616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300031545\|Ga0318541_10353683	All Organisms → cellular organisms → Bacteria → Proteobacteria	820	Open in IMG/M
3300031545\|Ga0318541_10474972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	699	Open in IMG/M
3300031546\|Ga0318538_10014045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio	3417	Open in IMG/M
3300031561\|Ga0318528_10682183	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300031572\|Ga0318515_10647898	Not Available	560	Open in IMG/M
3300031573\|Ga0310915_10427927	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300031679\|Ga0318561_10590509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300031681\|Ga0318572_10425307	Not Available	790	Open in IMG/M
3300031682\|Ga0318560_10485159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	670	Open in IMG/M
3300031682\|Ga0318560_10585127	Not Available	605	Open in IMG/M
3300031724\|Ga0318500_10206734	All Organisms → cellular organisms → Bacteria → Proteobacteria	942	Open in IMG/M
3300031744\|Ga0306918_10529311	Not Available	923	Open in IMG/M
3300031744\|Ga0306918_10577437	All Organisms → cellular organisms → Bacteria → Proteobacteria	881	Open in IMG/M
3300031747\|Ga0318502_10414046	All Organisms → cellular organisms → Bacteria → Proteobacteria	802	Open in IMG/M
3300031748\|Ga0318492_10089847	Not Available	1497	Open in IMG/M
3300031748\|Ga0318492_10689836	Not Available	547	Open in IMG/M
3300031763\|Ga0318537_10382014	Not Available	519	Open in IMG/M
3300031768\|Ga0318509_10498488	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300031768\|Ga0318509_10827385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300031770\|Ga0318521_10368286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	853	Open in IMG/M
3300031771\|Ga0318546_10115458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1777	Open in IMG/M
3300031778\|Ga0318498_10495234	Not Available	538	Open in IMG/M
3300031796\|Ga0318576_10008524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3677	Open in IMG/M
3300031796\|Ga0318576_10149495	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300031799\|Ga0318565_10332115	Not Available	738	Open in IMG/M
3300031799\|Ga0318565_10612601	Not Available	523	Open in IMG/M
3300031819\|Ga0318568_10107250	All Organisms → cellular organisms → Bacteria → Proteobacteria	1678	Open in IMG/M
3300031821\|Ga0318567_10398205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	780	Open in IMG/M
3300031879\|Ga0306919_10633449	Not Available	824	Open in IMG/M
3300031879\|Ga0306919_10730247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300031879\|Ga0306919_11070004	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300031880\|Ga0318544_10314450	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300031890\|Ga0306925_10194015	All Organisms → cellular organisms → Bacteria	2189	Open in IMG/M
3300031890\|Ga0306925_11061273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	821	Open in IMG/M
3300031890\|Ga0306925_11275610	Not Available	731	Open in IMG/M
3300031890\|Ga0306925_11724520	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300031890\|Ga0306925_12080847	Not Available	532	Open in IMG/M
3300031897\|Ga0318520_10705475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300031910\|Ga0306923_10594123	Not Available	1243	Open in IMG/M
3300031910\|Ga0306923_10934803	All Organisms → cellular organisms → Bacteria → Proteobacteria	947	Open in IMG/M
3300031912\|Ga0306921_10569643	Not Available	1312	Open in IMG/M
3300031912\|Ga0306921_10589897	All Organisms → cellular organisms → Bacteria → Proteobacteria	1286	Open in IMG/M
3300031912\|Ga0306921_12758461	Not Available	503	Open in IMG/M
3300031941\|Ga0310912_10454966	Not Available	998	Open in IMG/M
3300031946\|Ga0310910_10152673	All Organisms → cellular organisms → Bacteria → Proteobacteria	1767	Open in IMG/M
3300031947\|Ga0310909_10549548	Not Available	966	Open in IMG/M
3300031947\|Ga0310909_10641795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	885	Open in IMG/M
3300031959\|Ga0318530_10367432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300032035\|Ga0310911_10436093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	758	Open in IMG/M
3300032051\|Ga0318532_10133230	All Organisms → cellular organisms → Bacteria → Proteobacteria	881	Open in IMG/M
3300032052\|Ga0318506_10029741	All Organisms → cellular organisms → Bacteria	2080	Open in IMG/M
3300032059\|Ga0318533_10531272	Not Available	862	Open in IMG/M
3300032060\|Ga0318505_10054724	All Organisms → cellular organisms → Bacteria → Proteobacteria	1720	Open in IMG/M
3300032060\|Ga0318505_10311159	Not Available	743	Open in IMG/M
3300032060\|Ga0318505_10481600	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300032064\|Ga0318510_10149651	All Organisms → cellular organisms → Bacteria → Proteobacteria	921	Open in IMG/M
3300032064\|Ga0318510_10372994	Not Available	604	Open in IMG/M
3300032064\|Ga0318510_10421186	Not Available	571	Open in IMG/M
3300032090\|Ga0318518_10514873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300032091\|Ga0318577_10438856	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300032094\|Ga0318540_10060123	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300032261\|Ga0306920_100598434	All Organisms → cellular organisms → Bacteria → Proteobacteria	1631	Open in IMG/M
3300032261\|Ga0306920_102592405	Not Available	695	Open in IMG/M
3300032261\|Ga0306920_104121809	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300032261\|Ga0306920_104133770	Not Available	524	Open in IMG/M
3300033289\|Ga0310914_10767576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	862	Open in IMG/M
3300033289\|Ga0310914_11025681	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.30%
Host-Associated	Host-Associated	0.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.30%
Plants	Host-Associated → Plants	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.62%
Loam	Environmental → Terrestrial → Soil → Loam	14.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	62.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.90%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.80%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100383151	3300000597	Forest Soil	MSHAFRATVMIAAVGALSGMAGERLYAQGVDPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDH
AF_2010_repII_A1DRAFT_100582521	3300000597	Forest Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDH
AF_2010_repII_A001DRAFT_100853101	3300000793	Forest Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVD
AP72_2010_repI_A100DRAFT_10197461	3300000837	Forest Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQV
Ga0066395_101882762	3300004633	Tropical Forest Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSDGK
Ga0066388_1007736221	3300005332	Tropical Forest Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEG
Ga0066388_1032253833	3300005332	Tropical Forest Soil	MSHAFRATVMIAAAATALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKF
Ga0066388_1045974872	3300005332	Tropical Forest Soil	MSHAFRATVMIAAVGALWGMAGERLYAQGVDPNAAPNPYKMQENWAQLPEGRKFGAA
Ga0066388_1077879662	3300005332	Tropical Forest Soil	MNQALRATVMIAAAVGALSCMAGARLYAQGADPNAAPNPYKMQENWAQLPE
Ga0066388_1084328182	3300005332	Tropical Forest Soil	MSQAFRATVMIAAAVGALSGMAGEPLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQID
Ga0008090_101644502	3300005363	Tropical Rainforest Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQEDWAHLPEGRKFGAAIK
Ga0008090_102554223	3300005363	Tropical Rainforest Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRK
Ga0070710_103672633	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSPAFRATVMIAAAAGALTGMAGERLCAQGADPNVAPNPYKMQENWAQ
Ga0070711_1004449811	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSPAFRATVMIAAAAGALTGMAGERLCAQGADPNVAPNPYKMQENWAQLVEGRKFGA
Ga0070706_1004786441	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSHAFRATIMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKF
Ga0070697_1002223413	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQL
Ga0066905_1019870612	3300005713	Tropical Forest Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHS
Ga0066905_1022264672	3300005713	Tropical Forest Soil	MSHAFRATVMIAAVGALWGMAGERLYAQGVDPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSDGKS
Ga0066903_1008038715	3300005764	Tropical Forest Soil	MRHAFRATVMIAAAAGALSGMGGERLYAQAADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSDGKS
Ga0066903_1024612141	3300005764	Tropical Forest Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGTDPNAAPNPYKMQDNWAQLPEGRKFGAAIKVQVDHSDGKSIWV
Ga0066903_1027858822	3300005764	Tropical Forest Soil	MSHAFRAIVMIATGAGALSGMASERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVD
Ga0066903_1031507981	3300005764	Tropical Forest Soil	MNHAFRATVMIAAAAGALSGMAGERLYAQAADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQLDHSDGK
Ga0066903_1055084101	3300005764	Tropical Forest Soil	MSHAFRATVMIAAAAGALLGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKF
Ga0070717_118360561	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSHAFRATIMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGA
Ga0075433_103166401	3300006852	Populus Rhizosphere	MSQAIRATVMIGLAAGADPNAAPNPYQMQENWAQLPEGRKFGAAIKVQV
Ga0126380_108463272	3300010043	Tropical Forest Soil	MIAAVGALWGMAGERLYAQGVDPNAAPNPYKMQENWAQLPEGRKFG
Ga0126384_104295081	3300010046	Tropical Forest Soil	MIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQ
Ga0126382_118783941	3300010047	Tropical Forest Soil	MSHAFRATVMMAAAASALSGMAGERLYAQGADPNASPYKMQENWAQLPEGRKFGAAIKVQIDHSDGKSIWVFD
Ga0126373_104927402	3300010048	Tropical Forest Soil	MIAAVGALSGMAGERLYAQGVDPNAAPNPYKMQENWAQLPEGRKFGAA
Ga0126373_126968391	3300010048	Tropical Forest Soil	MSHAFRATVMIAAAASALSGMAGEGLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQV
Ga0126370_107932734	3300010358	Tropical Forest Soil	MIAAAAGALSAMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKF
Ga0126372_114698632	3300010360	Tropical Forest Soil	MIAAVGALSGMAGDRLYAQGVDPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSD
Ga0126378_108774441	3300010361	Tropical Forest Soil	MNQAFRATVIVTAAAGALSGMAGERLYAQSAEPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSDGKSIW
Ga0126378_113963382	3300010361	Tropical Forest Soil	MSYAFRTIVMIATAASALSGMAGERLYAQGVDPNAAPNPYKMQENWAQLPDGRKFGAAIKVQVDHSDDKSIWV
Ga0126378_132427201	3300010361	Tropical Forest Soil	MIAAVGALWGMAGERLYAQGVDPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSD
Ga0126377_106318462	3300010362	Tropical Forest Soil	MIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFG
Ga0126379_109843482	3300010366	Tropical Forest Soil	VALTVGVVAGALAATAGHRLHAQGADPNAAPNPYKTQESWAQLSGGRQFGAA
Ga0126381_1008466422	3300010376	Tropical Forest Soil	MIAATAGALSGMAGERLYAQGADPNTAPNPYKMQENWAQLPTDRKFGQVIKVQVDHSDGKTIW
Ga0126381_1010355501	3300010376	Tropical Forest Soil	MIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSDGKSI
Ga0126381_1015174681	3300010376	Tropical Forest Soil	MKTVRAALTIAMAAGALMAMAGHRVNAQAADPNAAPNPYKMQENWAQLQAGRKF
Ga0126381_1036541682	3300010376	Tropical Forest Soil	MIAAVGALSGMAGERLYAQGVDPNAAPNPYKMQENWAQLPEGRKFGAAI
Ga0126383_100745481	3300010398	Tropical Forest Soil	MIAAVGALSGMAGERLYAQGVDPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSDGKS
Ga0124844_10287293	3300010868	Tropical Forest Soil	MIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWTQLPEGRKF
Ga0137383_104302692	3300012199	Vadose Zone Soil	MIAAATGALSGMAGEPLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQ
Ga0137362_103047112	3300012205	Vadose Zone Soil	MVAAAASALSGIAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQ
Ga0137378_105389951	3300012210	Vadose Zone Soil	MIAATASALSGMAGERLYAQGADPNAAPNPYKMQDGWAQLPDGRKWGAAIKIQVDHSD
Ga0137377_118233232	3300012211	Vadose Zone Soil	MAAAAASALSGMAGEPLYAQGADPNAAPNPYKMQENWAQLPEGRKFGA
Ga0137386_103585383	3300012351	Vadose Zone Soil	MITAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLAEGRKFGAAIKV
Ga0137384_105002613	3300012357	Vadose Zone Soil	MIAATASALSGMAGERLYAQGADPNAAPNPYKMQESWAQLAEGRKFGAAIKVQVDH
Ga0137361_116980542	3300012362	Vadose Zone Soil	MSHAFRATVMVAAAASALSGIAGERLYAQGADPNAAPNPYKMQENWAQL
Ga0126375_100533701	3300012948	Tropical Forest Soil	MSQAFRATVMIAAAVGALSGMAGEPLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAA
Ga0126369_105142512	3300012971	Tropical Forest Soil	MIAAVGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAI
Ga0164305_112035611	3300012989	Soil	MIAAAAGALTGMAGERLCAQGADPNVAPNPYKMQESWAQLGEGR
Ga0182036_100030079	3300016270	Soil	MQYAARAALIIGVAAGTLTALAGDRLCAQGADPNAAPNPYKMQENWAQLPEGRKFG
Ga0182036_108413222	3300016270	Soil	MSHAFRATVMIAAAANALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDH
Ga0182041_115565241	3300016294	Soil	MSHAFRATVMIAAAATALSGMAGERLYAQGADPNAAPNPYKMQENWAQLP
Ga0182033_103321861	3300016319	Soil	MIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPE
Ga0182033_109011871	3300016319	Soil	MSHAFRATVMIAAAATALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSDGKSI
Ga0182035_114550792	3300016341	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYTMQENWAQLPEARKF
Ga0182035_115897422	3300016341	Soil	MSHAFRATVMIAAVGALSGMAGERLYAQGADPNAAPNPYKMQENWAQL
Ga0182032_106345913	3300016357	Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFG
Ga0182032_109216892	3300016357	Soil	MSHAFRTTVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQL
Ga0182037_119941611	3300016404	Soil	MSHAFRATVMIAAVGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKF
Ga0210399_111917921	3300020581	Soil	MSHAFRATVMIVAVASVLSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIK
Ga0210405_105117732	3300021171	Soil	MKHTIGVMLMIGAVAGATAMPGNRAYAQAADPNAAPNPYKAQENWAQLAAGRKFGA
Ga0210402_115649331	3300021478	Soil	MSHAFRATVMIVAVASVLSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGSAIK
Ga0126371_104618371	3300021560	Tropical Forest Soil	MSHAFRATVMIAAVGALSGMAGERLYAQGVDPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSDGKSI
Ga0126371_119407952	3300021560	Tropical Forest Soil	MSYAFRTIVMIATAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQVPEGRKFGAAIKVQVDHSDGK
Ga0207646_102559763	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAI
Ga0207646_107753342	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSQAFRATVMIAATASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLAEGRKFGAAIKVQVDHSDGKSIWVFD
Ga0257157_10787931	3300026496	Soil	MSHTFRATVMIAAAAGALIGMTGEQLSAQGADPNAAPNLYKIQENWAQLEEGRKFGAAIKVQVDHS
Ga0257165_10491602	3300026507	Soil	MSHAFRATMMVAAAASALSGIAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSDGKSH
Ga0257158_10941881	3300026515	Soil	MKYAIRATLMIGLAAGAITAMAGNRVYAQAADPNAAPNPYKMQEN
Ga0318534_106116162	3300031544	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRK
Ga0318541_103536831	3300031545	Soil	MIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPDGRKFGAA
Ga0318541_104749721	3300031545	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQL
Ga0318538_100140451	3300031546	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGSAIKVQVDHSDGKSI
Ga0318528_106821831	3300031561	Soil	MIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQE
Ga0318515_106478982	3300031572	Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSDG
Ga0310915_104279273	3300031573	Soil	MIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPDGRKF
Ga0318561_105905092	3300031679	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFG
Ga0318572_104253071	3300031681	Soil	MNHGFRATVMIAAAAGALSGMAGERLYAQGSDPNAAPNPYKMQENWAQLPEGRKFGAAIKVQ
Ga0318560_104851592	3300031682	Soil	MSQAFRATVIVTAAAGALSCMAGERLYAQGADANAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHS
Ga0318560_105851271	3300031682	Soil	MSNGFRATVMIAAAAGALSGMAGERLCAQSSDPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSD
Ga0318500_102067342	3300031724	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGTDPNAASNPYKMQENWAQLPEGRKFGAAIKVQ
Ga0306918_105293111	3300031744	Soil	MMHVIRVIIVIAVAGAFIAMFGHRLYAQGADPNAAPNPYKMQDNWAQLPESRKFGAAIK
Ga0306918_105774371	3300031744	Soil	MIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPDGRKFGAAIKVQVD
Ga0318502_104140462	3300031747	Soil	MTHAIRAMTVIAVAGTLVTMSGHRLYAQGADPNAAPNPYKMQDNWAQLPEGRKFGAAIKV
Ga0318492_100898471	3300031748	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGSAIKVQVDHSD
Ga0318492_106898362	3300031748	Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSD
Ga0318537_103820141	3300031763	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQ
Ga0318509_104984882	3300031768	Soil	MSHAFRATVMIAAVGALSGMAGERLYAQGVDPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSDGKS
Ga0318509_108273851	3300031768	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYTMQENWAQLP
Ga0318521_103682862	3300031770	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGSAIKVQVDHSNS
Ga0318546_101154583	3300031771	Soil	MSHAFRATVMIAAVGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSDGKSIW
Ga0318498_104952342	3300031778	Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEG
Ga0318576_100085241	3300031796	Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQADH
Ga0318576_101494952	3300031796	Soil	MSHAFRATVMIAAAATALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGA
Ga0318565_103321151	3300031799	Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPE
Ga0318565_106126011	3300031799	Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIK
Ga0318568_101072501	3300031819	Soil	MSHAFRTTVMIAAAASALSGMAGERLYAQGADPNAARNPYKMQENWAQLPEGRKFGAAIKVQVDHS
Ga0318567_103982051	3300031821	Soil	MSHTFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGR
Ga0310917_108442412	3300031833	Soil	MSHAFRTTVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQ
Ga0306919_106334491	3300031879	Soil	MSHAFRATVMIAAVGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPE
Ga0306919_107302472	3300031879	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGSAIK
Ga0306919_110700041	3300031879	Soil	MSHAFRTTVMIAAAASALSGMAGERLYAQGADPNAARNPYKMQENWAQLPEGRKFGAAIKVQ
Ga0306919_113475352	3300031879	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWA
Ga0318544_103144501	3300031880	Soil	MSHAFRATVMIAAVGALSGMAGERLYAQGVDPNAARNPYKMQENWAQLPEGRKFGAAIKVQVDHSD
Ga0306925_101940154	3300031890	Soil	MSHAFRVTVMVAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIK
Ga0306925_110612732	3300031890	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGA
Ga0306925_112756101	3300031890	Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGA
Ga0306925_117245202	3300031890	Soil	MSHAFRTTVMIAAAASALSGMAGERLYAQGADPNAARNPYKMQENWAQLPEGRKFGAAIKVQVDHSDG
Ga0306925_120808471	3300031890	Soil	MSHAFRATVMIAAVGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGA
Ga0318520_107054752	3300031897	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGSAIKVQ
Ga0306923_105941231	3300031910	Soil	MIAAAAGALSGMAGERLYAQGSDPNAAPNPYKMQENWAQLPEGRKFG
Ga0306923_109348033	3300031910	Soil	MIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLP
Ga0306921_105696431	3300031912	Soil	MNHGFRATVMIAAAAGALSGMAGERLYAQGSDPNAAPNPYKMQENWAQLPEG
Ga0306921_105898972	3300031912	Soil	MSHAFRATVMIAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGR
Ga0306921_127584611	3300031912	Soil	MSHAFRATVMIAAVGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEG
Ga0310912_104549661	3300031941	Soil	MSNGFRATVMIAAAAGALSGMAGERLCAQSSDPNAAPNPYKMQENWAQ
Ga0310910_101526731	3300031946	Soil	MSHAFRTTVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPE
Ga0310909_105495482	3300031947	Soil	MSHAFRATVMIAAVGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIK
Ga0310909_106417952	3300031947	Soil	MSHAFRATVMIAAAASALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQ
Ga0318530_103674322	3300031959	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENRAQLPEG
Ga0310911_104360931	3300032035	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGSAIKVQV
Ga0318532_101332301	3300032051	Soil	MSHAFRATAVIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVEHPDALAIAVIDLDL
Ga0318506_100297413	3300032052	Soil	MQYAARAALTIGVAAGALIALSGDRLCAQGADPNAAPNPYKMQETWAKLPDGRKLGSAIK
Ga0318533_105312721	3300032059	Soil	MNHGFRATVMIAAAAGALSGMAGERLYAQGSDPNAAPNPYKMQENWAQL
Ga0318505_100547242	3300032060	Soil	MQYAARAALTIGVAAGALIALSGDRLCAQGADPNAAPNPYKMQETWAKLPDGRK
Ga0318505_103111591	3300032060	Soil	MSHAFRATVMIAAVGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKV
Ga0318505_104816002	3300032060	Soil	MSHAFRATVMIAAVGALSGMAGERLYAQGVDPNAARNPYKMQENWAQLPEGRKFGAAIKVQVDH
Ga0318510_101496511	3300032064	Soil	MQYAARAALTIGVAAGALIALSGDRLCAQGADPNAAPNPYKMQETWAKLPDGRKLGSAI
Ga0318510_103729942	3300032064	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGAAIKVQVDHSDGKS
Ga0318510_104211861	3300032064	Soil	MNHGFRATVMIAAAAGALSGMAGERLYAQGSDPNAAPNPYKMQENWAQLPE
Ga0318518_105148732	3300032090	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGSA
Ga0318577_104388561	3300032091	Soil	MIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRK
Ga0318540_100601231	3300032094	Soil	MSHTFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQL
Ga0306920_1005984345	3300032261	Soil	MIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPDGRKFGAAIKVQV
Ga0306920_1025924051	3300032261	Soil	MSHAFRATAMIAAAAGALSGMACERLYAQGADPNAAPNPYKMQENWAQLP
Ga0306920_1041218091	3300032261	Soil	MSHAFRATVMIAAAAGALSGMACERLYAQGADPNAAPNPYKMQENWAQLPEGRK
Ga0306920_1041337701	3300032261	Soil	MSHAFRATVMIAAVGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRK
Ga0310914_107675761	3300033289	Soil	MSHAFRATVMIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPEGRKFGSAIKVQVDHSDSKSI
Ga0310914_110256811	3300033289	Soil	MIAAAAGALSGMAGERLYAQGADPNAAPNPYKMQENWAQLPDGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051765

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences