Metagenome Family F051601

Basic Information
Family ID	F051601
Family Type	Metagenome
Number of Sequences	143
Average Sequence Length	54 residues
Representative Sequence	MTRWRRSTGEGNIYRTKRAGANLTYLFAASVKSEGVQVDMVTVRTVIKGLRR
Number of Associated Samples	3
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	3
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Most Common Taxonomy
Group	Unclassified (99.301 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Roots → Unclassified → Unclassified → Root (97.203 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.00% β-sheet: 0.00% Coil/Unstructured: 55.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF10536	PMD	46.85
PF13456	RVT_3	4.90
PF00665	rve	2.80
PF04195	Transposase_28	0.70
PF14223	Retrotran_gag_2	0.70
PF00078	RVT_1	0.70
PF03732	Retrotrans_gag	0.70
PF07727	RVT_2	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	2.80
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	2.80
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	2.80
COG4584	Transposase	Mobilome: prophages, transposons [X]	2.80

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
All Organisms	root	All Organisms	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
cellular organisms	root	All Organisms → cellular organisms	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300014486\|Ga0182004_10001926	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	15806	Open in IMG/M

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Roots	Host-Associated → Plants → Roots	97.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.80%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified	97.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.80%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	97.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.80%

Habitat	Taxonomy	Distribution
Root	Host-Associated → Plants → Roots → Unclassified → Unclassified → Root	97.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.80%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300014486	Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaG	Host-Associated	Open in IMG/M
3300015261	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0182004_100001949	3300014486	Root	MTRWKKSTGEGSIYRIKRAGANLTYLFVASEKSEGVQVDMVTVRTVNKGLRR*
Ga0182004_1000021830	3300014486	Root	MTGWKESTREGSIYRTKRAGANLTYLFAASIKSESVQVDMVTVRTIIKGLRR*
Ga0182004_1000077221	3300014486	Root	MARWRRSVEEGGIYRIKWTGVFLTYLFAVSVKIESVQVDMVTIRTIIKGLCR*
Ga0182004_100019265	3300014486	Root	MTRWRKSAEEGSIYRTKRVGAVLTYLFAISVKIEGVQVDKVTVRTIIKGLCG*
Ga0182004_1000281918	3300014486	Root	MTRWRKSAEEGSIYRTKRVRAFLTYLFAVSVKIEGAQVDMVTIRMIIKALRG*
Ga0182004_100032622	3300014486	Root	MTGWKKSTGEGSIYRTKRAGANLTSLFVASEKSEGVQVDMVTVRTIIKGLHR*
Ga0182004_100032913	3300014486	Root	MARWRKGAEEGSIYRTKRARAFLTYLFVVSMKIEGVQVDMVTVCTIIKGLYR*
Ga0182004_100035956	3300014486	Root	MKRWRKSAEEGSIYRVKCAGVFLTYLFTVSMKFEGVQVDMVTVRMVIKGLCR*
Ga0182004_100037456	3300014486	Root	MARWRKSTEEGSIYRIKTAGVFLTYPFAVSVKIEGAQVDMVTVLTVIKVLCR*
Ga0182004_1000385012	3300014486	Root	MTGWKKSTGEGSIYRTKRAGANLTYLFVASEKSEGVQVDMVTVRTVIKGFDSKRS*
Ga0182004_1000437410	3300014486	Root	MTGWKRSTGEGSIYRTKRAGANLTYLFVASEKSEGIQVDMVTVRTVIQGLRR*
Ga0182004_100047388	3300014486	Root	MARWRKGAEEGSICRTKRARAFLTYLFAISVKIKGVHVDMVTVCTIIKGLCR*
Ga0182004_1000512210	3300014486	Root	MTGWKKSTEEGSICRTKRAGANLTYVFAASVKPEGVQVDMVTVRTVIKGLRR*
Ga0182004_100061525	3300014486	Root	MTRWRKSTGEGGIYRTKKARANLTHFFAASVKSEGVQMDMVTVRTIIKGLRR*
Ga0182004_100062149	3300014486	Root	MARWRKGVEEESIYRTKREGAFLTYLFAVSVKIEGVQVDMVTVRTIIKRLCR*
Ga0182004_100064392	3300014486	Root	MTRWRKSAEEGSIYMEKCVGVFLTYLFVVSVKLEDVQVDMVTVCMIIMGLSR*
Ga0182004_1000709615	3300014486	Root	MARWRKGVEEGSIHRTKRAGAILTYLIAVSVKSEGVQVDMVTVRTIVKGLCR*
Ga0182004_100074529	3300014486	Root	MPPPGRWILGCGMTRWRKSTGEGSIYRTKPAGVNLTYLFAASVKSEGVQVDMVTVCTVIKGLRR*
Ga0182004_100074699	3300014486	Root	MESTEEGSIYRTKQAGANPTYLFAASVKSEGVQVDMVTIRTVIKGLRR*
Ga0182004_1000846910	3300014486	Root	MTGWKKSTGEGSIYRTKRARANLTYLFVASEKSEGLQVDMVTVRMVIKGLRR*
Ga0182004_100088867	3300014486	Root	MEESTGEGSIYRTKRAGANLTYLFIASEKSKGVQVDMVTVHTVIKGLRR*
Ga0182004_1001030712	3300014486	Root	MPLPGRWIFGCRMTRWRRSTGEGSIYRTKREGANLTYLFAASVKSEGVQVDMVTVRTVVKGLRR*
Ga0182004_100104291	3300014486	Root	MSPSGKWILGCRMIRWRWSTEEGSIYRTKWAGANLTYLFAASVKFEGVQVDMVTVRTVIKGLCR*
Ga0182004_100110024	3300014486	Root	MARWRKGAKEGSIYRIKRAEVFLTYLFAVSVKIESVQGDMVTVCTVIKGLCR*
Ga0182004_100122266	3300014486	Root	MTKWRRSTREGGIYRTKRARANLTYLFAASVKSEGVQVEMVTVRTIIKGLCR*
Ga0182004_100125386	3300014486	Root	MPPPGKWNLGCRMTRWRRSTRAGSIYRTKWAGANLTYLFAASVKSEGVQVDMVTVRTVIKELRR*
Ga0182004_100127891	3300014486	Root	RMTRWRKSTGEGSIYRTKRAGANLTYLFAASVKSEGVQVDMVTVYTIIKGLRR*
Ga0182004_100138026	3300014486	Root	MTRWRKSAEEGIIYRVKCAGVFVTYLFAVSIKLEGVQVDMVTVRTIIKGLCK*
Ga0182004_100138426	3300014486	Root	MPPPGEWILGYRMTRWRRSTGEGSIYRTKWAGANLTYLFAASVKSEGVQVDMVTIRTVIKGLHR*
Ga0182004_100142132	3300014486	Root	MTGWKKNTGEGSVYRTKRAGANLTYLFATSVKFEGVQVDMVTVRTVFKGLRM*
Ga0182004_100149781	3300014486	Root	MIRWRKSTREGSIYRTERAGANLTYLFAVSVKSEGVQVDMVTVHTVIKGLRR*
Ga0182004_100150533	3300014486	Root	MIRWRRSTGEGSIYRTKQAGANLTYLFAASMKSEGVQVDMVIIRTVIQGLRR*
Ga0182004_1001614510	3300014486	Root	MTGWEKSTGEGSIYRTKWAGANLTYLFAASEKSEGVQVDMVTVCTIIKGLRR*
Ga0182004_100161824	3300014486	Root	MTRWRKSTGEGSIYRTERAGANPTYLFTVSVKSEGVQVDMVTVRMVIKGLRR*
Ga0182004_100172191	3300014486	Root	MVPPPRKWILGCRMTRWRRSTREGSIYRTKRVGANLTYLFAASVKSEGIQVDMETIRTVIKGLRR*
Ga0182004_100176354	3300014486	Root	MTGWKKSIREGSIYRIKRAGANLTYLFAASVKSEGVQVDMVTIRTIIKRLRR*
Ga0182004_100176548	3300014486	Root	MARWRKSAEEGAIYRTKRLGAFLTYLFVVSVKFKGVQLDMVTVRMVIKGLCK*
Ga0182004_100177421	3300014486	Root	MTRWKKSIGEGSIYRTKGGGANLTYLFAVSKKSEGVQVDMVTVRTVTKGLHR*
Ga0182004_100179075	3300014486	Root	MGKSTGEGSIYRTKRVGANPTYRFAVSVKSTGVQLDMATGRTIIKGLCR*
Ga0182004_100181948	3300014486	Root	MTGWKKSTREGSIYRTKGVGAILTYLFAASVKSKGVQVDMVTVRTIIKGLRR*
Ga0182004_100182148	3300014486	Root	MTRWRKSTEEGSIYSTKRAGANLTYLFAVSMKSEGVQVDMITVRTVIKGLRR*
Ga0182004_100190746	3300014486	Root	MIRWRKSIGEESIYRTKRAGANLTYLFAASVKSEGVQVDMVTVRMIIKELHRI*
Ga0182004_100191894	3300014486	Root	MPPLGKWILSCRMIRWRSTGEGSIYRTKWAGANLTYLFAASVKSEGVQVDMITVRTVIKGLRR*
Ga0182004_100195205	3300014486	Root	MTGWKKSTREGSIYKRKRAGANLTYLFVASEKSDGDQVDMVTVHTVINGLRR*
Ga0182004_100196057	3300014486	Root	MTGWKKSTREGSIYRTRRARANLTYLFATSMKSEGVQVDMVTVRMIIKGLRR*
Ga0182004_100196702	3300014486	Root	LSLPRKWIGGYKMTRWRRSTEEGSIYRAKRAGANLTYLFAASMKSEGIQVDMVTVRTVIKKLRR*
Ga0182004_100197206	3300014486	Root	MTRWRKSVEEGSIYRTKRAGAFLTYIFAVSVKIESVQVDMVTVRTVIKGLCI*
Ga0182004_100199894	3300014486	Root	MPHPGRWILGCRVTRWRRSTGEGSIYRTKRAEANLTYLFAASVKFEGVQVDMVTIRTVIKGLRR*
Ga0182004_1002008510	3300014486	Root	MTGWEKSTGEGSIYRTKGGRANMTYLFAVSVKSEGVQVDMVTVHTVIKGLRR*
Ga0182004_100217656	3300014486	Root	MTRWRRSTREGSIYRTKRIRANLTYLFAASVKSEGAQVDMVTVRTVI*
Ga0182004_100219967	3300014486	Root	MSLLGKWVLSCRMTGWRRSTGEGSIYRTKRAGVNLTYLFATSVKSEGVQVDMVTVRTC*
Ga0182004_100221121	3300014486	Root	MPPSGKWILGCRMTRWRRSTGEGSIYRTKRVGANLTYLFAASVKSEGVQVDMVTVRTVIKGLCR*
Ga0182004_100226563	3300014486	Root	VVPSRRRWILGCRMTRWRRGTREGSIYRTKRAGADLIYLFAASVKSEGVQVDMITVCTVIKGLRRWFDSKRSQF*
Ga0182004_100239244	3300014486	Root	MTGWKKRTGEGSIYRTKRAGPNLTYLFVASEKSEGVQVDMVTVRTIIKGLHR*
Ga0182004_100239797	3300014486	Root	MTRWRKSAEEGSIYRIKRAGAFLTYPFAVSVKIEGVQVDTVTVRMVTKGLCR*
Ga0182004_100245225	3300014486	Root	MTRWRKGAEEGSIYRIKRAGAFLIYLFAVSMKIEGVQVDMVTVRTIIKGLCR*
Ga0182004_100247357	3300014486	Root	MTGWKRSTREGSIYRTRRAGANLTYLFAASEEFDGVQVDMVTVRTIIKGLHR*
Ga0182004_100251913	3300014486	Root	MTGWKKSTGEGSIYRTKRVGANLTYLFAASVKPEGYQVDMVTVRTVIKGLRR*
Ga0182004_100258015	3300014486	Root	MTRWRKSTGEGSICRTKRAGANLTYLFTVSKGVQVDMVTVRTVIKGLRM*
Ga0182004_100260475	3300014486	Root	MPPPGKWILGCRMTRWRMTTGEGSIYRTKRAGANLTYLFAASVKSEGVQVDMVTVRIVINGLHR*
Ga0182004_100266126	3300014486	Root	MTRWRKSTGEGSIYRTRRAGANLTYLFAASVKSEGVQVDMVTIRMIIKGLCR*
Ga0182004_100266416	3300014486	Root	MTRWRKSAEEGSIYRIKRAGVFLTYSFAVSMKIEGVQVDMVTVRTIIKGLCR*
Ga0182004_100268254	3300014486	Root	MGKSTGEESIYRTKRAGANLAYLFAVSMKSEGVQVDMATVRTIIKGLRK*
Ga0182004_100290121	3300014486	Root	MPPPEKEILGCRMIRWRRSTGEGSIYRTKRAGANLTYLFAASVKSEGVQVDMVTV
Ga0182004_100292352	3300014486	Root	MTGWKKSTGEGSIYRTKRAGANLTYLFVASEKSEGVQVDMITVHTVIKGLRR*
Ga0182004_100316782	3300014486	Root	VEMTGWKKSTGEGSIYRTKREGANLTYVFVASEKSEGIQVDMVTVCTIIKGLRR*
Ga0182004_100318937	3300014486	Root	MTRWRRSTGEGNIYRTKRAGANLTYLFAASVKSEGVQVDMVTVRTVIKGLRR
Ga0182004_100323005	3300014486	Root	MTGWEKSTGEGSIYRTRRAGANLTYLFATSVKSEGAQVDMVTVRTIIKGLRR*
Ga0182004_100328923	3300014486	Root	MTGWRKSTGEGSIYRTRRAGENFTYLFAASVKSERVQVDMVTVCMIIKGLCR*
Ga0182004_100354991	3300014486	Root	RWRKSAEEGSIYRIKRAGAFLTYLFAVSVKIEGVQVDMVTVRTVIKGLCR*
Ga0182004_100360945	3300014486	Root	MWGYKMMRWRKSTREGGIYRTKGARANPTYLFAASVKSEGVQVDMVTVCTIIKGLCR*
Ga0182004_100363873	3300014486	Root	MIGWKKSSGEGSIYRTRRVGANLTYLFAASVKSEGVQVDMVTVHTIIKGLCR*
Ga0182004_100364983	3300014486	Root	MTRWKRSTEEGSIYRSKRAGVNVTYLFAISVKSESIQVDMVTVRTVIKGLRT*
Ga0182004_100375372	3300014486	Root	MQWRRSTREGSIYRAKRAREDLTYLFAISVKSEGTQVDMVTVRTVIKGLRR*
Ga0182004_100378743	3300014486	Root	MTGWEKSTGEGSIYRTKRAGANLTYLFAASEKSEGVQVDMVTVRMIIKGLRR*
Ga0182004_100387511	3300014486	Root	MTRWRRSAEEGSIYKIKIVGAFLTYLFTVSVKIEVVQMDMVTVRTVIKRLCR*
Ga0182004_100404363	3300014486	Root	MTRWRKSTEEGSIYWTNRAGAFLTYLFAVSVKIEGVHVDMVTFRTIIKGLCGCFDSKRS*
Ga0182004_100408861	3300014486	Root	MPPPGKWILGCTMTRWRRSTREGSIYRTKRAGANLTYLLAASVKSEGVQVDMVTVRTTIKGLCR*
Ga0182004_100430733	3300014486	Root	MIRWRRSTGEGSIYRTNRAGANLTYLFAASVKSEGVQVDMVTVHTVIKGLRR*
Ga0182004_100442274	3300014486	Root	MTRWRKSTEEGSIYRTKRVGENLTYLFVASEKSEGALVDKITVHTVIKGLHR*
Ga0182004_100452612	3300014486	Root	MPPPGRWIVGSRMIRWRRSTGEESIYRIKRARANLTYLFAVSVKSEGVQVDMIIVRTIINGLRR*
Ga0182004_100459713	3300014486	Root	MTGWEKSTGEGSIYRSKRAGANLTYLFVASEKSEGVQVDMVTVCTVIKGLCR*
Ga0182004_100468751	3300014486	Root	MIRWRKSTGEGSIYRTKTVGADLTYLFAVSVKSEGVQVDMVTVCMVIKGLCR*
Ga0182004_100483441	3300014486	Root	MPPLEKWILGCRMMRWRRSTGEGSIYRTKRAGAKLTYLFAAFVKSEGVQVEMVTVCTTIKGLCRRFDSER*
Ga0182004_100515374	3300014486	Root	MTRWRKSAEAGSIYRTKRAGVFLTFLFAVSVKIEGVQVDMVTVRTIIKGLCG*
Ga0182004_100515433	3300014486	Root	MARWRKSAEEGGIYRLKRPGAFLTYLFAISMKFEVVQMDMVTVRMIIKGLCR*
Ga0182004_100519623	3300014486	Root	MTRWRKSAEEGSIYRTKRAGVFLTYLFAVSMKIEGVQVDMVTVRTII*
Ga0182004_100534053	3300014486	Root	MTRWRKSTEEGSIYRTKRAGANLTYLFAVSVKSKGVQMDMVIVRTVIKGLHR*
Ga0182004_100562821	3300014486	Root	MTGWKKSTREGSIYKTRRAGANLTYLFAASIKSEGVQKDMVTVRTVIQGLRR*
Ga0182004_100601442	3300014486	Root	MMRWRRSTREGTIYRTKRARANLTYLFAVSVKSEDTQVDMVTVRTVIKGLRR*
Ga0182004_100622993	3300014486	Root	MPPPGKWILGCRMIRWRRSTGEESIYRTKWARANLTYLFAASVKSEGVQVDMVTVRMVIKGLRR*
Ga0182004_100627611	3300014486	Root	MIGWKKSTEEGSIYRIKRVGANLTYLFAASMKSDGVQVDMVNVRTIIKGLRR*
Ga0182004_100678262	3300014486	Root	MIRWGRSTGEGSIYRTKWVGANMTYLFAASAKSEGVQVNMVTVRTVIKGLRR*
Ga0182004_100683692	3300014486	Root	MPLPGRWIWGYRMTRWRKSTGEGSIYRTKQAGANLTYLFAASMKSEGVQVDMVTVRTVIKGLRR*
Ga0182004_100700653	3300014486	Root	MPPPGKWILGCRMTRWRRSTGEGGIYRTKRVGANLTYLFAASVKSEGVQVDMVTVRTTIKGLCT*
Ga0182004_100700972	3300014486	Root	MIRWRRSTGEGSIYRTDRAGANLTYLFAASVKSEGVQVDMVTVRTVIKGLRR*
Ga0182004_100762703	3300014486	Root	MTRWRKCTGEGSIYRTKRAGANLTYLFVAFVKYEGVLVDMVTVRTIIKGLCR*
Ga0182004_100791891	3300014486	Root	MTRWKRSTREGSIYRTKRTGANLTYLFAASVKSEGAQVDMVTVRTVIKG
Ga0182004_100798171	3300014486	Root	MIGWKKSTGEGSIYRTRRTGANLTYLFAASVKYEGVQVDMVTIHTIIKGLRR*
Ga0182004_100807541	3300014486	Root	MPPLGRWILGCRMTRWRRSTREGSIYRTKREEANLTYLFAASVKFEGVQVDMVTVRTVIKGLRR*
Ga0182004_100811791	3300014486	Root	SCRMIRWRRSTGEGSIYRTKRAGANLTYLFAASVKSEGVQLDMVTVRTIIKGLRR*
Ga0182004_100825992	3300014486	Root	MPPPGMWILGCRMTRWKRSIGEGSIYRTKRAGANLTYLFTASVKSEGVQVDMITVRTVIKGLRR*
Ga0182004_100832012	3300014486	Root	MTRWRKSTGEGSIYRTKRAGANLTYLFAASVKYEGVQVDMVTVRMIIKGLCR*
Ga0182004_100835253	3300014486	Root	MTEWKKSTGEGSIYRTKRAGENLTYVFAASVKSEGVQVDMVTVRTIIKGLRR*
Ga0182004_100835862	3300014486	Root	MTGWKKSTREGSIYRTPREGANLTYFFAASVKCEGVQVDMVTVRTIIKGLWR*
Ga0182004_100844681	3300014486	Root	CGMVRWRRSTREGTIYKTKRASVNLTFLFAVSMKSEDTQVDMVTVRMIIKGLRR*
Ga0182004_100936981	3300014486	Root	TGWKKSTGEGSIYRTRRVGANLTYLFAASVKSEGVQVDMVTIRTIIKGLRR*
Ga0182004_100961291	3300014486	Root	MMRWRRSTREGTIYRTKQARANLTYLFAVSVKSEDTQVDMVTIHTVIKGLRR*
Ga0182004_101052901	3300014486	Root	MTGWKRSTGEGSIYRTKRARANLTYLFAASEKSEGVQVDMVTVRPVIKGLRR*
Ga0182004_101064401	3300014486	Root	MPPPGKWILSGRMTRWRRSTGEGSIYRTKRAGANLTYLFAASVKSEGVQVD
Ga0182004_101070092	3300014486	Root	MPPPGKWTLGCRMIRWRRSTKEGSIYRTKRAGANLTYLFAASMKSEGVQVDMVTVRTIIKGL
Ga0182004_101075612	3300014486	Root	MTGWRKSTREGSIYRTKRAGANLTYLFAASVKSEGVQMDMVTVRTIIKGLRR*
Ga0182004_101125511	3300014486	Root	MTRWRKSAEEGSIYRIKRAGAFLTYLFAVSVKIEGVQVDMVTVRTVIKGLCR*
Ga0182004_101132051	3300014486	Root	GIYRTKRARANLTYLFAASVKSEGVQVDMVTVHTIIKGLRR*
Ga0182004_101133841	3300014486	Root	RSTGEGSIYRTKWARANLTYLFAASVKSEGIQVDMVTIRTVIKGLRR*
Ga0182004_101142231	3300014486	Root	RMTRWRRSTREGSIYRTKRAGANLTYLFAASVKSEGAQVDMVTVRTVIKGLCR*
Ga0182004_101142491	3300014486	Root	WKKSTGEGSIYRTRRVGANLTYLFAASVKSEGVQVDMVTVRTIIKGLRR*
Ga0182004_101144211	3300014486	Root	MTRWRKSTGEGSIYRTKRAGANLTYLFAASMKSEGVQVDMVTVRTIIKGL
Ga0182004_101184642	3300014486	Root	CRMIRWRRSTEEGTIYRTNQAGANLTYLFATSVKSEGVQVDMVTVRMVIKELCR*
Ga0182004_101184951	3300014486	Root	STREGTIYRTKRARANLTYLFTVSMKSEGTQVDMIIVCTVIKGLRR*
Ga0182004_101201091	3300014486	Root	RKSAREGSIYRKKRAGAFLTYPFAVSVKIEGVQVDMVTVRTVINGLCR*
Ga0182004_101226691	3300014486	Root	MENDKMEEEYRRRKYLKDKEGRAILTYLFTVSVKSEGVQVDMVTVRTVIKRLRR*
Ga0182004_101350472	3300014486	Root	MIGWKKNTGEGSIYRTKRAGTNLTYLFVASEKSEGVQVDMVTVRTVIKGLRR*
Ga0182004_101506201	3300014486	Root	GSIYRTKRTGANLTYLFAASVKSEGAQVDMVTVRTVIKGLRR*
Ga0182004_101510622	3300014486	Root	VSPPGKESLGCRMMRWRRGTQEGSIYRTKWARANLTYLFAASMKSEGAQVDMVTVRTIIKGLRRLFDRKLS*
Ga0182004_101565072	3300014486	Root	MRWRSSTREGTIYSTKRARANLTYLFAVSVKSESTQVDMVTVRTIIKG
Ga0182004_101664502	3300014486	Root	SIYRTKWARANLTYLFAVSVKSEDTQVDMVTVRTVIKELRR*
Ga0182004_101880201	3300014486	Root	TREGTIYRIKRARANLTYLFAASEKPEDAQVDMVTVRTVIKRLCR*
Ga0182004_101960921	3300014486	Root	MPPPRKRILGCRMTRWRRSTGEGSIYRTKREGANLTYVFAASVKSEGVQVDMVTVHMIIKGLRR*
Ga0182004_102090591	3300014486	Root	GTIYRTKRARANLTYLFAVSVKSEGTQVDMVTVRTIIKGLYR*
Ga0182004_102199471	3300014486	Root	TIYRTRWARANPTYLFAASEKPEGTQVDMVTVRTVIQGLCT*
Ga0182004_102200932	3300014486	Root	RWRKSTGEGSIYRTKRAGANLTYLFAASVKSEGVQVDMETVRTIIKGLRR*
Ga0182004_102202681	3300014486	Root	STREGTIYKTKWARANLTYLLAASEKSEGVQVDMITVRTIIEGLCR*
Ga0182004_102340251	3300014486	Root	RRSTGEGSIYRTKRAGANLTYLFAASVKSEGVQVDMVTVRTIIKGLRR*
Ga0182004_102432721	3300014486	Root	KVILGCRMTRWRRSTQEGSIYRTKRARANLTYLFAASVKSEDVQIDMVTVRTIIKGLHR*
Ga0182004_102494151	3300014486	Root	MSTGEGSIYRTNRAGANLTYLFAASVKSEGVQVDMVTVRTVIKG
Ga0182004_102656951	3300014486	Root	MIRWRRSTREGSIYRTNRAGANLTYLFAASVKSEGVQVDMVTVRTVIKG
Ga0182004_102928191	3300014486	Root	STGEGSIYRTKRVRANLTYLFAASVTSEGVQVDMLTIRTVIKGLRR*
Ga0182004_102949401	3300014486	Root	WRRSTREGTIYKTKWARANLTYLLAASEKSEGVQVDMVTVHTIIEGLCR*
Ga0182006_11544032	3300015261	Rhizosphere	MTRWRKSTGEGSIHRIKRVGAFLTYLFAVSMKFEGVQVDMVTVRMVIKGLCR*
Ga0182007_102485022	3300015262	Rhizosphere	RSTREGTIYRIKRARANLTYLFAASEKPEDAQVDMVTVRTVIKGLCR*
Ga0182007_102667251	3300015262	Rhizosphere	RRSTQEGSIYRTKWVGANLTYLFAASVKSEGVQMDMVTVRTIIKGLHR*
Ga0182007_103198861	3300015262	Rhizosphere	MEKEYPRMKYYRTKRARANLTYLFAVSVKSEDTQVDMVTVHTVIKGLRR*

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F051601

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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