NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F051512

Metagenome / Metatranscriptome Family F051512

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F051512
Family Type Metagenome / Metatranscriptome
Number of Sequences 144
Average Sequence Length 116 residues
Representative Sequence MSAVYTLEQILNAQKGLSADGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTLILTLAEAQDLLTALGDPCPGSLMEVAGRFATAAPGPPQWTEEDDESVEGS
Number of Associated Samples 127
Number of Associated Scaffolds 144

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.94 %
% of genes near scaffold ends (potentially truncated) 36.81 %
% of genes from short scaffolds (< 2000 bps) 77.78 %
Associated GOLD sequencing projects 114
AlphaFold2 3D model prediction Yes
3D model pTM-score0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (76.389 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(13.889 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(49.306 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 33.10%    β-sheet: 12.41%    Coil/Unstructured: 54.48%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.211.1.2: PDEased1tbfa_1tbf0.54756
a.211.1.0: automated matchesd1z1la11z1l0.54318
a.211.1.0: automated matchesd2ousa12ous0.54005
a.211.1.2: PDEased1so2a_1so20.53314
a.211.1.0: automated matchesd2r8qa_2r8q0.52843

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 144 Family Scaffolds
PF00128Alpha-amylase 16.67
PF08530PepX_C 4.86
PF12680SnoaL_2 1.39
PF11941DUF3459 1.39
PF01619Pro_dh 1.39
PF00487FA_desaturase 0.69
PF00496SBP_bac_5 0.69
PF09335SNARE_assoc 0.69
PF00571CBS 0.69
PF01425Amidase 0.69
PF10115HlyU 0.69
PF16657Malt_amylase_C 0.69
PF069833-dmu-9_3-mt 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 144 Family Scaffolds
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 16.67
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 16.67
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 16.67
COG3280Maltooligosyltrehalose synthaseCarbohydrate transport and metabolism [G] 16.67
COG2936Predicted acyl esteraseGeneral function prediction only [R] 4.86
COG0506Proline dehydrogenaseAmino acid transport and metabolism [E] 1.39
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 0.69
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 0.69
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 0.69
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 0.69
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 0.69
COG2764Zn-dependent glyoxalase, PhnB familyEnergy production and conversion [C] 0.69
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 0.69
COG3865Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferaseGeneral function prediction only [R] 0.69

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms76.39 %
UnclassifiedrootN/A23.61 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090015|GPICI_8973052All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4061Open in IMG/M
2170459018|G1P06HT01CUTQRAll Organisms → cellular organisms → Bacteria602Open in IMG/M
2228664021|ICCgaii200_c0804155Not Available790Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105523202All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1495Open in IMG/M
3300000953|JGI11615J12901_10597335Not Available698Open in IMG/M
3300000955|JGI1027J12803_105322975All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium803Open in IMG/M
3300000956|JGI10216J12902_100265563All Organisms → cellular organisms → Bacteria1486Open in IMG/M
3300002886|JGI25612J43240_1037461Not Available698Open in IMG/M
3300003320|rootH2_10087145All Organisms → cellular organisms → Bacteria → Proteobacteria1745Open in IMG/M
3300003349|JGI26129J50193_1001789All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1488Open in IMG/M
3300003911|JGI25405J52794_10121169All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300004052|Ga0055490_10146195Not Available693Open in IMG/M
3300004145|Ga0055489_10129076Not Available752Open in IMG/M
3300004281|Ga0066397_10005240Not Available1436Open in IMG/M
3300005333|Ga0070677_10726674All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300005335|Ga0070666_10858276All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300005341|Ga0070691_10188315All Organisms → cellular organisms → Bacteria → Proteobacteria1078Open in IMG/M
3300005353|Ga0070669_100172812All Organisms → cellular organisms → Bacteria1686Open in IMG/M
3300005365|Ga0070688_100051092All Organisms → cellular organisms → Bacteria2578Open in IMG/M
3300005406|Ga0070703_10371475All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300005439|Ga0070711_100665864Not Available874Open in IMG/M
3300005440|Ga0070705_100279144All Organisms → cellular organisms → Bacteria1187Open in IMG/M
3300005444|Ga0070694_100014647All Organisms → cellular organisms → Bacteria → Proteobacteria4911Open in IMG/M
3300005445|Ga0070708_100162314All Organisms → cellular organisms → Bacteria2083Open in IMG/M
3300005456|Ga0070678_101330401Not Available669Open in IMG/M
3300005467|Ga0070706_100017908All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6535Open in IMG/M
3300005529|Ga0070741_10010723All Organisms → cellular organisms → Bacteria → Proteobacteria17193Open in IMG/M
3300005536|Ga0070697_100035401All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae4027Open in IMG/M
3300005886|Ga0075286_1012110All Organisms → cellular organisms → Bacteria1027Open in IMG/M
3300005937|Ga0081455_10651271Not Available678Open in IMG/M
3300006050|Ga0075028_100555003Not Available677Open in IMG/M
3300006163|Ga0070715_10213426All Organisms → cellular organisms → Bacteria988Open in IMG/M
3300006163|Ga0070715_11019869Not Available517Open in IMG/M
3300006237|Ga0097621_101993733All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300006806|Ga0079220_10086131All Organisms → cellular organisms → Bacteria1591Open in IMG/M
3300006806|Ga0079220_10551448Not Available804Open in IMG/M
3300006852|Ga0075433_10004943All Organisms → cellular organisms → Bacteria10439Open in IMG/M
3300006854|Ga0075425_100267296All Organisms → cellular organisms → Bacteria1968Open in IMG/M
3300006871|Ga0075434_100067499All Organisms → cellular organisms → Bacteria3562Open in IMG/M
3300006903|Ga0075426_10159536All Organisms → cellular organisms → Bacteria1628Open in IMG/M
3300006914|Ga0075436_100104825All Organisms → cellular organisms → Bacteria1971Open in IMG/M
3300007258|Ga0099793_10273210All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300007265|Ga0099794_10148127All Organisms → cellular organisms → Bacteria1191Open in IMG/M
3300009038|Ga0099829_10374581All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300009088|Ga0099830_10133474All Organisms → cellular organisms → Bacteria1892Open in IMG/M
3300009143|Ga0099792_10029601All Organisms → cellular organisms → Bacteria2525Open in IMG/M
3300009143|Ga0099792_10487664All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300009162|Ga0075423_10043425All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4606Open in IMG/M
3300009162|Ga0075423_11392729All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300010145|Ga0126321_1085429Not Available507Open in IMG/M
3300010362|Ga0126377_10209753All Organisms → cellular organisms → Bacteria1873Open in IMG/M
3300010362|Ga0126377_12079342All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300010400|Ga0134122_10388913All Organisms → cellular organisms → Bacteria1228Open in IMG/M
3300012096|Ga0137389_10822515All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium797Open in IMG/M
3300012202|Ga0137363_10626006All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium909Open in IMG/M
3300012203|Ga0137399_10220171All Organisms → cellular organisms → Bacteria1547Open in IMG/M
3300012211|Ga0137377_10027702All Organisms → cellular organisms → Bacteria5098Open in IMG/M
3300012351|Ga0137386_10682798All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300012909|Ga0157290_10283185Not Available603Open in IMG/M
3300012917|Ga0137395_10457851All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300012923|Ga0137359_11591825All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300012923|Ga0137359_11720597All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium514Open in IMG/M
3300012925|Ga0137419_11551067All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium562Open in IMG/M
3300012927|Ga0137416_10671799All Organisms → cellular organisms → Bacteria → Proteobacteria908Open in IMG/M
3300012930|Ga0137407_12246772All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium521Open in IMG/M
3300012931|Ga0153915_10092181All Organisms → cellular organisms → Bacteria3198Open in IMG/M
3300012931|Ga0153915_11875513All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300012957|Ga0164303_10014591All Organisms → cellular organisms → Bacteria2854Open in IMG/M
3300012961|Ga0164302_11914110Not Available505Open in IMG/M
3300013100|Ga0157373_10030303All Organisms → cellular organisms → Bacteria3893Open in IMG/M
3300014968|Ga0157379_11406162Not Available676Open in IMG/M
3300015262|Ga0182007_10044619All Organisms → cellular organisms → Bacteria1470Open in IMG/M
3300015371|Ga0132258_10450538All Organisms → cellular organisms → Bacteria3208Open in IMG/M
3300015371|Ga0132258_10857661All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2292Open in IMG/M
3300015372|Ga0132256_102747354Not Available591Open in IMG/M
3300017927|Ga0187824_10029135All Organisms → cellular organisms → Bacteria1656Open in IMG/M
3300017930|Ga0187825_10080943All Organisms → cellular organisms → Bacteria1114Open in IMG/M
3300017936|Ga0187821_10159905All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300017993|Ga0187823_10233924All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300017994|Ga0187822_10102971All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300019888|Ga0193751_1238390All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium572Open in IMG/M
3300020069|Ga0197907_10539661All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium560Open in IMG/M
3300020070|Ga0206356_11429838All Organisms → cellular organisms → Bacteria2423Open in IMG/M
3300020080|Ga0206350_10751137All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria531Open in IMG/M
3300020579|Ga0210407_10024454All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4490Open in IMG/M
3300021086|Ga0179596_10371630Not Available719Open in IMG/M
3300021404|Ga0210389_10308477All Organisms → cellular organisms → Bacteria → Proteobacteria1241Open in IMG/M
3300022467|Ga0224712_10270666All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300023057|Ga0247797_1021949All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium829Open in IMG/M
3300024224|Ga0247673_1013457All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300025885|Ga0207653_10235067All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300025905|Ga0207685_10822644Not Available513Open in IMG/M
3300025906|Ga0207699_10048521All Organisms → cellular organisms → Bacteria2495Open in IMG/M
3300025910|Ga0207684_10018169All Organisms → cellular organisms → Bacteria6025Open in IMG/M
3300025910|Ga0207684_11147648All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300025916|Ga0207663_10456821Not Available986Open in IMG/M
3300025916|Ga0207663_11480516All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300025922|Ga0207646_11174535All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria674Open in IMG/M
3300025923|Ga0207681_10215356All Organisms → cellular organisms → Bacteria1483Open in IMG/M
3300025932|Ga0207690_10001517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria14520Open in IMG/M
3300025945|Ga0207679_11629224All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300025949|Ga0207667_11265389Not Available715Open in IMG/M
3300025971|Ga0210102_1053646All Organisms → cellular organisms → Bacteria871Open in IMG/M
3300025981|Ga0207640_11610473Not Available585Open in IMG/M
3300026011|Ga0208532_1008515All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300026285|Ga0209438_1056231All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1297Open in IMG/M
3300026359|Ga0257163_1016197All Organisms → cellular organisms → Bacteria1145Open in IMG/M
3300026496|Ga0257157_1004829All Organisms → cellular organisms → Bacteria2041Open in IMG/M
3300026497|Ga0257164_1047178All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300026514|Ga0257168_1007602All Organisms → cellular organisms → Bacteria1954Open in IMG/M
3300026551|Ga0209648_10152934All Organisms → cellular organisms → Bacteria1819Open in IMG/M
3300026952|Ga0207434_1009315Not Available764Open in IMG/M
3300027655|Ga0209388_1001967All Organisms → cellular organisms → Bacteria → Proteobacteria4922Open in IMG/M
3300027695|Ga0209966_1062064All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300027717|Ga0209998_10114836All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300028047|Ga0209526_10339744Not Available1008Open in IMG/M
3300028536|Ga0137415_10827171Not Available736Open in IMG/M
3300028592|Ga0247822_10956430Not Available705Open in IMG/M
3300028673|Ga0257175_1003463All Organisms → cellular organisms → Bacteria2008Open in IMG/M
3300028792|Ga0307504_10393153All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300028811|Ga0307292_10450428All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium550Open in IMG/M
(restricted) 3300031150|Ga0255311_1066189All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300031720|Ga0307469_10466494Not Available1097Open in IMG/M
3300031720|Ga0307469_10489978All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1074Open in IMG/M
3300031720|Ga0307469_12199853Not Available537Open in IMG/M
3300031740|Ga0307468_100122311All Organisms → cellular organisms → Bacteria1605Open in IMG/M
3300031820|Ga0307473_10001466All Organisms → cellular organisms → Bacteria6326Open in IMG/M
3300031820|Ga0307473_10016515All Organisms → cellular organisms → Bacteria2880Open in IMG/M
3300032012|Ga0310902_11116363Not Available552Open in IMG/M
3300032174|Ga0307470_10129102All Organisms → cellular organisms → Bacteria1508Open in IMG/M
3300032174|Ga0307470_10341672All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300032180|Ga0307471_100102390All Organisms → cellular organisms → Bacteria2603Open in IMG/M
3300032180|Ga0307471_100845306All Organisms → cellular organisms → Bacteria1082Open in IMG/M
3300033412|Ga0310810_10007291All Organisms → cellular organisms → Bacteria12599Open in IMG/M
3300033412|Ga0310810_10129617All Organisms → cellular organisms → Bacteria2963Open in IMG/M
3300033433|Ga0326726_10832702All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium893Open in IMG/M
3300033433|Ga0326726_11539298Not Available647Open in IMG/M
3300033486|Ga0316624_12186764Not Available515Open in IMG/M
3300033500|Ga0326730_1017210All Organisms → cellular organisms → Bacteria1530Open in IMG/M
3300033513|Ga0316628_100393104All Organisms → cellular organisms → Bacteria1760Open in IMG/M
3300033550|Ga0247829_11295844Not Available603Open in IMG/M
3300034817|Ga0373948_0016695All Organisms → cellular organisms → Bacteria1360Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil13.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere12.50%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.86%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.86%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.47%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.78%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.08%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.08%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil2.08%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.08%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.08%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.39%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.39%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.39%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.39%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.39%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.39%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.39%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.39%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.39%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.69%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.69%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.69%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.69%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.69%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.69%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.69%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.69%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.69%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.69%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil0.69%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.69%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.69%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.69%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.69%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.69%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.69%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090015Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
2170459018Litter degradation MG2EngineeredOpen in IMG/M
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300003320Sugarcane root Sample H2Host-AssociatedOpen in IMG/M
3300003349Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PMHost-AssociatedOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300004052Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004145Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005886Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010145Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023057Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6EnvironmentalOpen in IMG/M
3300024224Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025971Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026011Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301 (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026359Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-AEnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300026497Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-BEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026952Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-10 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027695Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033500Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fractionEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GPICI_004062402088090015SoilMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARVMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPG
2MG_015071602170459018Switchgrass, Maize And Mischanthus LitterNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARVMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDPEECG
ICCgaii200_080415522228664021SoilMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARVMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWWEDG
INPgaii200_032838022228664022SoilEGQAFCRSLLSHGEVLAVQLSYLPEALLWLVTSPTQTRIMRAHQPGCMILTLAEAHDLFTAVGDPSPATLMEVAGRFATAAPGTPDWIDDEDARPREPGDGDEDDYV
INPhiseqgaiiFebDRAFT_10552320223300000364SoilMSAVYTLEQILNRLDALSLEGQAFCRSLLSHGEVLAVQLSYLPEALLWLVTSPTQTRIMRAHQPGCMILTLAEAHDLFTAVGDPSPATLMEVAGRFATAAPGTPDWIDDEDARPREPGDGDEDDYV*
JGI11615J12901_1059733513300000953SoilMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARVMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAP
JGI1027J12803_10532297513300000955SoilLDALSLEGQAFCRSLLSHGEVLAVQLSYLPEALLWLVTSPTQTRIMRAHQPGCMILTLAEAHDLFTAVGDPSPATLMEVAGRFATAAPGTPDWIDDEDARPREPGDGDEDDYV*
JGI10216J12902_10026556323300000956SoilMSAVYTLEQILNRLDALSLDSQEFCRSLLKHGEVLAVQVSYLPEALLWLVTSPTQSRIMLAQQPDCVIMTLAEARDLFTAVGDPCPGTLMEAAGRFATASPGTPEWNDDDDMWPQDVPEDGEDSHYV*
JGI25612J43240_103746113300002886Grasslands SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPDSLMEVAGRFATAAPGPHWTEEDDEGVEGS*
rootH2_1008714523300003320Sugarcane Root And Bulk SoilMSSVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYLPEALVWLVTSPMQARIMRAHRPDAVILTLGEARDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWPDDEGDGDVEECG*
JGI26129J50193_100178933300003349Arabidopsis Thaliana RhizosphereMSAVYTLEQILNRLDELSLDGRAFCRSLLSHGEVLAVQLSYLPEALLWLVTSPTQTRIMRAHQPECMILTLAEACDLFTALGDPCPASLMEVAGRFATAAPGTPEWKDDDVEPYEGRDEDESDYV*
JGI25405J52794_1012116923300003911Tabebuia Heterophylla RhizosphereMSAVYTLEQILNHLDELSLDGQTFCRTLLTHGEVLAVQLSYLPEALLWLVSSPTQTRIMRAQQPDCMVITLAEARELFTVLGDPCPTTLMEVAGRFATAAPGVPEASEPSDWTDDPDAGEDYGVPN*
Ga0055490_1014619513300004052Natural And Restored WetlandsMSAVYTLEQLLSDQYELSPDSRAFCKTLLRHGEVLAVQLSYLPEALLWLVTSAAQARLMRAHRAATLILTLGEARDLFTALGDPAPATLMEAAGRFATAAPGTTDWQKDDGDDDYV*
Ga0055489_1012907613300004145Natural And Restored WetlandsMSAVYTLEQLLSDQYELSPDSRAFCKTLLRHGEVLAVQLSYLPEALLWLVTSAAQARLMRAHRAATLILTLGEARDLFTALGDPAPATLMEAAGRFATAAPGTTDWQKDDEDDDYV*
Ga0066397_1000524033300004281Tropical Forest SoilMSAVYTLEQILNRLDALSLDGQAFCRSLLSHGEVLAVQLSYLPEALLWLVTSPTQTRIMRAHQPDCMILTLAEAHDLFTAVGDPSPGTLMEVAGRFATAAPGTPDWVDDEDAGPAEPGDGDEGDYL*
Ga0070677_1072667423300005333Miscanthus RhizosphereATMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDPEECG*
Ga0070666_1085827613300005335Switchgrass RhizosphereLSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARVMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDPEECG*
Ga0070691_1018831523300005341Corn, Switchgrass And Miscanthus RhizosphereMSEVYTLQQILSGRQGLSRDGRAFCEALLTYGEVLAVRLGYLPEALLWLVTSPHQVRIMRAHQPDVPILTLAEAQDLLAAVGDPRPGSLMEVAGTFATAPPGTPEPEEEDDDEEWV*
Ga0070669_10017281223300005353Switchgrass RhizosphereMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARVMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGNADGDPEECG
Ga0070688_10005109213300005365Switchgrass RhizosphereVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDPEECG*
Ga0070703_1037147513300005406Corn, Switchgrass And Miscanthus RhizosphereMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTRVLTLAEAQDLFTTLGDPCPDNLMEVAGRFATAAPGPQQWTEEDDEGFEGS*
Ga0070711_10066586413300005439Corn, Switchgrass And Miscanthus RhizosphereMTAVYTLEQIMNAQARLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTTLGDPCPGSLMEVAAQFVTAAPGAPQWTGSQESTDSRQEWAEDDEDTFGPA*
Ga0070705_10027914433300005440Corn, Switchgrass And Miscanthus RhizosphereMTAVYTLEQIMNAQARLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTTLGDPCPGSLMEVAAQFVTAAPGAPQW
Ga0070694_10001464723300005444Corn, Switchgrass And Miscanthus RhizosphereMSEVYTLQQILSGRQGLSRDGRAFCEALLTYGEVLAVRLGYLPEALLWLVTSPHQVRIMRAHQPDVPILTLAEAQDLLAAVGDPRPGSLMEVARTFATAPPGTPEPEEEDDDEEWV*
Ga0070708_10016231433300005445Corn, Switchgrass And Miscanthus RhizosphereMTAVYTLEQIMNAQARLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTMLGDPCPGNLMEVAARFATAAPGAPQWTGSQESTGSRQEWAEDDEDTFGPA*
Ga0070678_10133040113300005456Miscanthus RhizosphereMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWS
Ga0070706_10001790893300005467Corn, Switchgrass And Miscanthus RhizosphereMTAVYTLEQIMNAQARLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTMLGDPCPGNLMEVAARFATAAPGAPQWT
Ga0070741_1001072313300005529Surface SoilMSAVYTLEQILGAQNGLSESSRAFCEALLTYGEVLAVRLSYFPQALVWLVTSSMQARIMRAHRPDAVILTLAEARDLLTTLGDPGPVTLMEVAGQLATAAPGAPQWTDRDEGDVEECG*
Ga0070697_10003540133300005536Corn, Switchgrass And Miscanthus RhizosphereMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTVGDPCPDSLMEVAGRFATAAPGPHWTEEDDEGVEGS*
Ga0075286_101211013300005886Rice Paddy SoilMSEVYTLQQILSGRPGLSRDGRAFCEALLTYGEVLAVRLGYLPEALLWLVTSPHQARIMRAHQPNVPILTLAEAQDLLTAIGDPRPSSLMEVARSFATAPPGAPEWPEEDDDEKWV*
Ga0081455_1065127123300005937Tabebuia Heterophylla RhizosphereMSAVYTLEQILNRLDALSLDGQAFCRSLLSHGEVLAVQLSYLPEALLWLVTSPTQTRIMRAHQPNCMILTLAEAHDLFTAVGDPSPATLMEVAGRFATAAPGTPDWVDDEDAGPPEPGDGDEDGYV*
Ga0075028_10055500313300006050WatershedsMSAVYTLEQILNAQKGISADGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTRVLSLAEAQDLFTTLGDPCPDTLMEVAGRFATAAPDPQQWTPGPDQWTDDEGVE
Ga0070715_1021342623300006163Corn, Switchgrass And Miscanthus RhizosphereMTAVYTREQIMNAQARLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTTLGDPCPGSLMEVAAQFVTAAPGAPQWTGSQESTDSRQEWAEDDEDTFGPA*
Ga0070715_1101986913300006163Corn, Switchgrass And Miscanthus RhizosphereMTAVYTLEQIMNAQTRLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTTLGDPCPGNLMEVAAQFATAAPGAPQWTSSQESMDSRQEWAEDDEDTFGPA*
Ga0097621_10199373313300006237Miscanthus RhizosphereILNAQTGLSADGRAFCEALLTYGEVLAVRLGYLPEGLLWLVSSPMQSRLMHAQRPDTRILTLAEAQDLFTTLGDPCPDTLMEVAGRFASAAPGPQQWTDEDDEGLEGS*
Ga0079220_1008613123300006806Agricultural SoilMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDEECG*
Ga0079220_1055144813300006806Agricultural SoilMSSVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYLPEALVWLVTSSMQARIMRAHRPDAVILTLGEARDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWPDDEGDGDVEECG*
Ga0075433_1000494343300006852Populus RhizosphereMTAVYTLEQIMNAQVRLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTTLGDPCPGNLMEVAAQFATAAPGAPQWAGSQESTDSRQEWAEDDDDTFGPA*
Ga0075425_10026729623300006854Populus RhizosphereMTAVYTLEQIMNAQTGLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLATLGDPCPGNLMEVAAQFATAAPGAPQWTGSQGSTDSRPEWREDDEDTFGPA*
Ga0075434_10006749923300006871Populus RhizosphereMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADPDAEECG
Ga0075426_1015953613300006903Populus RhizosphereQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSGDGDADPDAEECG*
Ga0075436_10010482543300006914Populus RhizosphereMTAVYTLEQIMNAQTGLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTTLGDPCPGNLMEVAAQFATAAPGAPQWTGSQGSTDSRPEWREDDEDTFGPA*
Ga0099793_1027321023300007258Vadose Zone SoilSAVYTLEQILNAQKGLSADGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTLILTLAEAQDLFTTLGDPCPDSLMEVAGRFATAAPGPHWTEEDDEGVEGS*
Ga0099794_1014812723300007265Vadose Zone SoilMSAVYTLEQILNAQKGLSADGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTLILTLAEAQDLLTALGDPCPGSLMEVAGRFATAAPGPPQWTEEDDESVEGS*
Ga0099829_1037458123300009038Vadose Zone SoilMSAVYTLEHILNAQKGLSADGRAFCEALLTCGEAHRPDTLILTLAEAQDLLTALGDPCPGSLMEVAGRFATAAPGPPQWTEDDDEGVEGS
Ga0099830_1013347433300009088Vadose Zone SoilMSAVYTLEQILNAQKGLCADGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTLILTLAEAQDLLTALGDPCPGSLMEVAGRFATAAPGPPQWTEEDDESVEGS*
Ga0099792_1002960143300009143Vadose Zone SoilMSAVYTLEQILNAQKGLSADGRAFCEALLKYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTLILTLAEAQDLLTALGDPCPGSLMEVAGRFATAAPGPPQWTEEDDESVEGS*
Ga0099792_1048766423300009143Vadose Zone SoilDSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPDSLMEVAGRFATAAPGPHWTEEDDEGVEGS*
Ga0075423_1004342543300009162Populus RhizosphereMTAVYTLEQIMNAQVRLSVEGRAFCEALLTYGEVLAVRVPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTTLGDPCPGNLMEVAAQFATAAPGAPQWAGSQESTDSRQEWAEDDDDTFGPA*
Ga0075423_1139272923300009162Populus RhizosphereLSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRTHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDPEECG*
Ga0126321_108542913300010145SoilMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVIMTLAEARDLLTTLGDPSPMTLMEVAGQLATAAPGAPQWSDDEDAGDAEECG*
Ga0126377_1020975323300010362Tropical Forest SoilMSAVYTLEQILNRLDALSLDGQAFCRSLLKHGEVLAVHLSYLPEALLWLVASPTQSRIMRAEQPECVVMTLAEARELFTAVGDPCPGTLMEAAGRFAIASPGTPEWSDEDDMWPPDGPDGEDGHYV*
Ga0126377_1207934213300010362Tropical Forest SoilMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAEARDLLTTLGDPSPVTLMEVAGQLATAAPGAPQWSDGEDDGDAEECG*
Ga0134122_1038891333300010400Terrestrial SoilVYTLEQILNAQTGLSADGRAFCEALLTYGEVLAVRLGYLPEGLLWLVSSPMQSRLMHAHRPDTRVLTLGEAQDLFTTLGDPCPDTLMEAAGRFATAAPGPQQWSEKDDEGLEGS*
Ga0137389_1082251513300012096Vadose Zone SoilMSAVYTLEQILNAQKGLSADGRAFCEALLKYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTLILTLAEAQDLLTALGDPCPGSLMEVAGRFATAAPGPPQWTEDDDEGVEGS*
Ga0137363_1062600623300012202Vadose Zone SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPDSLMEAAGRFATVAPGPHWTEDDEGVEGS*
Ga0137399_1022017123300012203Vadose Zone SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTSLGDPCPDSLMEVAGRFATAAPGPHWTEEDDEGVEGS*
Ga0137377_1002770253300012211Vadose Zone SoilMSAVYTLEQILNAQKRLSADGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTLILTLAEAQDLLTALGDPCPGSLMEVAGRFATAAPGPPQWTEEDDEGAEGS*
Ga0137386_1068279813300012351Vadose Zone SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRRMHAHRPDTLILTLAEAQDLLTALGDPCPGSLMEVAGRFATAAPGPPQWTEEDDEGVEGS*
Ga0157290_1028318523300012909SoilMSAVYTLEQILNRLDELSLDGRAFCRSLLSHGEVLAVQLSYLPEALLWLVTSPTQTRIMRAHQPECMILTLAEACDLFTALGDPCPASLMEVAGRFATAAPGTPEWKDDD
Ga0137395_1045785123300012917Vadose Zone SoilYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPDSLMEVAGRFATAAPGPHWTEEDDEGVEGS*
Ga0137359_1159182523300012923Vadose Zone SoilSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTLILTLAEAQDLLTALGDPCPGSLMEVAGRFATAAPGPPQWTEEDDESVEGS*
Ga0137359_1172059713300012923Vadose Zone SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPDSLMEVAGRFATAAPGPHWTEDDEGVEGS*
Ga0137419_1155106723300012925Vadose Zone SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTLILTLAEAQDLFTTLGDPCPDSLMEVAGRFATAAPGPHWTEEDDESVEGS*
Ga0137416_1067179933300012927Vadose Zone SoilMSAVYTLEQILNAQKGLSADGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTLILTLAEAQDLLTALGDPCPGSLMEVAGRFATAAPGPPQW
Ga0137407_1224677213300012930Vadose Zone SoilDSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPDSLMQAAGRFATVAPGPHWTEDDEGVEGS*
Ga0153915_1009218143300012931Freshwater WetlandsMSVAQVNGKEVAVMSEVYTLQQILSNRQGLSRDGRAFCEALLTYGEVLAVRLSYLPETLLWLVTSPHQARIMRSHQPNVPILTLAEAQDLLTAVGDPRPGSLMEVARSFATAPPGTPEWPEEEDDDEEWV*
Ga0153915_1187551313300012931Freshwater WetlandsMSEVYTLEQILSGQQGLSRDGRAFCEALLTYGEVLAVRLSYLPEALLWLVTSPHQARIMRGHQPNVPILTLAEARDLLTAVGDPRPGSLMEVARRFASAAPGMSEWPEDDDEDWV*
Ga0164303_1001459123300012957SoilMSAVYTLEQILSSQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSGDGDADPDAEECG
Ga0164302_1191411013300012961SoilMSAVYTLEQILNAQKGISADGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPESLMEAAGR
Ga0157373_1003030323300013100Corn RhizosphereMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPAAPQWSEDGDADGDPEECG
Ga0157379_1140616213300014968Switchgrass RhizosphereMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAG
Ga0182007_1004461923300015262RhizosphereMSEVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARVMRAHRPDAVILTLAESRDLLMTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDPEECG
Ga0132258_1045053823300015371Arabidopsis RhizosphereMTSGGTSVAPITSRVSKKEVAAMSEVYTLEQILSGQQGLSRDGRAFCEALLTYGEVLAVRLSYLPETLLWLVTSPHQARIMRGHQPNVPILTLAEAQDLMSAVGDPWPGSLMEVAGRFAVAAPGTTEWQDEDDDEWV*
Ga0132258_1085766113300015371Arabidopsis RhizosphereMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQERIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDPEECG
Ga0132256_10274735413300015372Arabidopsis RhizosphereMSEVYTLEQILSGQQGLSRDGRAFCEALLTYGEVLAVRLSYLPEALLWLVTSPHQARIMRGHQPDVPILTLAEAQDLLTAVGDPRPGSLMEAAGRFAIAAPGTAQWPDDEDDEEEWM*
Ga0187824_1002913513300017927Freshwater SedimentMSEVYTLEQILSGQQGLSRDGRAFCEALLTYGEVLAVRLSYLPETLLWLVTSPHQARIMRGHQPDVPILTLAEAQDLLTAVGDPRPDSLMEAAGRFAVAAPGTAEWPEDEDDDEEWL
Ga0187825_1008094323300017930Freshwater SedimentMSEVYTLEQILSGQQGLSRDGRAFCEALLTYGEVLAVRLSYLPEALLWLVTSPHQARIMRGHQPNVPILTLAEAQDLLTAVGDPWPGSLMEAAGRFAIAAPGTAEWREDEDDDEEWA
Ga0187821_1015990513300017936Freshwater SedimentMSEVYTLEQILSGQQGLSRDGRAFCEALLAYGEVLAVRLSYLPEALLWLVTSPHQARIMRGHQPNVPILTLAEAQDLLTAVGDPWPGSLMEAAGRFAIAAPGTAEWREDEDDDEEWA
Ga0187775_1006009023300017939Tropical PeatlandMSVVYTLELLLSDRYELSPASRAFCEALLGEGEVLAVGLSYLPETLLWLVTRESQARFMRAHRAASYILTLAEARDLFVALGDPGPVNLMEVAGRLSSAAPGSPPGDGNDEEDDDL
Ga0187823_1023392423300017993Freshwater SedimentMSEVYTLEQILSGQQGLSRDGRAFCEALLTCGEVLAVRLSYLPETLLWLVTSPHQARIMRGHQPDVPILTLAEAQDLLTAVGDPRPGSLMEAAGRFAVAAPGTAEWPEDEDDDEEWL
Ga0187822_1010297123300017994Freshwater SedimentILSGQQGLSRDGRAFCEALLTYGEVLAVRLSYLPETLLWLVTSPHQARIMRGHQPDVPILTLAEAQDLLTAVGDPRPDSLMEAAGRFAVAAPGTAEWPEDEDDDEEWL
Ga0193751_123839023300019888SoilMSAVYTLEQILNAQKGIPADGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPGTWVLSLTEAQDLFTTLGDPCPDTLMEVAGRFATAAPGPQQWTPGPDQWTDDEGVEGS
Ga0197907_1053966123300020069Corn, Switchgrass And Miscanthus RhizosphereMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARVMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDPEECG
Ga0206356_1142983853300020070Corn, Switchgrass And Miscanthus RhizosphereMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDPEECG
Ga0206350_1075113713300020080Corn, Switchgrass And Miscanthus RhizosphereREATMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARVMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDPEECG
Ga0210407_1002445423300020579SoilMAAVYTLEQIMNAQTRLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTTLGDPCPGNLMEVAAQFATAAPGAPQWTSSQESMDSRQEWAEDDEDTFGPA
Ga0179596_1037163013300021086Vadose Zone SoilMSAVYTLEQILNAQKGLSADGRAFCEALLKYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTLILTLAEAQDLLTALGDPCPGSLMEVAGRFATAAPGPPQWTEEDDESVEGS
Ga0210389_1030847723300021404SoilMTAVYTLEQIMNAQTRLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTTLGDPCPGNLMEVAAQFATAAPGAPQWTNSQESMDSRQEWAEDDEDTFGPA
Ga0224712_1027066613300022467Corn, Switchgrass And Miscanthus RhizosphereKREATMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDPEECG
Ga0247797_102194913300023057SoilMSAVYTLEQILNRLDELSLDGRAFCRSLLSHGEVLAVQLSYLPEALLWLVTSPTQTRIMRAHQPECMILTLAEACDLFTALGDPCPASLMEVAGRFATAAPGTPEWKDDDVEPYEGRDEDESDYV
Ga0247673_101345723300024224SoilMSAVYTLEQILNAQTGLSADGRAFCEALLTYGEVLAVRLGYLPEGLLWLVSSPMQSRLMHAHRPDTRVLTLGEAQDLFTTLGDPCPDTLMEAAGRFATAAPGPQQWSEKDDEGLEGS
Ga0207653_1023506713300025885Corn, Switchgrass And Miscanthus RhizosphereMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTRVLTLAEAQDLFTTLGDPCPDNLMEVAGRFATAAPGPQQWTEEDDEGFEGS
Ga0207685_1082264413300025905Corn, Switchgrass And Miscanthus RhizosphereMNAQARLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTTLGDPCPGSLMEVAAQFVTAAPGAPQWTGSQESTDSRQEWAEDDEDTFGPA
Ga0207699_1004852113300025906Corn, Switchgrass And Miscanthus RhizosphereMNAQAGLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTTLGDPCPGSLMEVAAQFVTAAPGAPQWTGSQESTDSRQEWAEDDEDTFGPA
Ga0207684_1001816963300025910Corn, Switchgrass And Miscanthus RhizosphereMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPDSLMEVAGRFATAAPGPHWTEEDDEGVEGS
Ga0207684_1114764823300025910Corn, Switchgrass And Miscanthus RhizosphereMTAVYTLEQIMNAQARLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTMLGDPCPGNLMEVAARFATAAPGAPQWTGSQESTGSRQEWAEDDEDTFGPA
Ga0207663_1045682113300025916Corn, Switchgrass And Miscanthus RhizosphereMTAVYTLEQIMNAQARLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTMLGDPCPGSLMEVAAQFVTAAPGAPQWTGSQESTDSRQEWAEDDEDTFGPA
Ga0207663_1148051613300025916Corn, Switchgrass And Miscanthus RhizosphereMSAVYTLEQILNAQKGISADGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPESLMEAAGRFATVAPGPHWTEDDEGIEGP
Ga0207646_1117453513300025922Corn, Switchgrass And Miscanthus RhizosphereMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDAEECG
Ga0207681_1021535623300025923Switchgrass RhizosphereMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGNADGDPEECG
Ga0207690_1000151713300025932Corn RhizosphereGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDPEECG
Ga0207679_1162922413300025945Corn RhizosphereLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADPDAEECG
Ga0207667_1126538913300025949Corn RhizosphereMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATA
Ga0210102_105364623300025971Natural And Restored WetlandsAMSAVYTLEQLLSDQYELSPDSRAFCKTLLRHGEVLAVQLSYLPEALLWLVTSAAQARLMRAHRAATLILTLGEARDLFTALGDPAPATLMEAAGRFATAAPGTTDWQKDDGDDDYV
Ga0207640_1161047313300025981Corn RhizosphereMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSGDGDADPDAEECG
Ga0208532_100851513300026011Rice Paddy SoilMSEVYTLQQILSGRPGLSRDGRAFCEALLTYGEVLAVRLGYLPEALLWLVTSPHQVRIMRAHQPDVPILTLAEAQDLLTAVGDPRPGSLMEVARSLAIAPPGTPEWPEEEDDDDEEWV
Ga0209438_105623123300026285Grasslands SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPDTLMEVAGRFATEEDDEGVEGS
Ga0257163_101619713300026359SoilGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLSLAEAQDLFTTLGDPCPDTLMEVAGRFATAAPGPQQWTEENDDGVEGS
Ga0257157_100482923300026496SoilMSAVYTLEQILNAQTGISADGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLSLAEAQDLFTTLGDPCPDTLMEVAGRLATAAPGPQQWTEENDDGVEGS
Ga0257164_104717813300026497SoilGWKGERPMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPDSLMEVAGRFATAAPGPHWTEEDDEGVEGS
Ga0257168_100760243300026514SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTSLGDPCPDSLMEVAGRFATAAPGPHWTEDDEGVEGS
Ga0209648_1015293423300026551Grasslands SoilMSAVYTLEQILNAQKGLSADGRAFCEALLKYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTLILTLAEAQDLLTALGDPCPGSLMEVAGRF
Ga0207434_100931513300026952SoilMSAVYTLEQILNRLDELSLDGRAFCRSLLSHGEVLAVQLSYLPEALLWLVTSPTQTRIMRAHQPECMILTLAEACDLFTALGDPCPASLMEVAGRFATAAPGTPEWKDDDVEPYEGRDED
Ga0209388_100196743300027655Vadose Zone SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPDSLMEVAGRFATAAPGPPQWTEEDDESVEGS
Ga0209966_106206423300027695Arabidopsis Thaliana RhizosphereMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARVMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWWEDGDADGDPEECG
Ga0209998_1011483613300027717Arabidopsis Thaliana RhizosphereATMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARVMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDPEECG
Ga0209526_1033974423300028047Forest SoilMSAVYTLEQILNAQKGLSADGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRSDTRVLTLAEARDLFTTLGDPCPDTLMEVAGRFATAAPGPQQWPEEDDEGVEGS
Ga0137415_1082717113300028536Vadose Zone SoilMSAVYTLEQILNAQKGLSADGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPDSLMEVAGRFATAAPCPQH
Ga0247822_1095643013300028592SoilMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDAD
Ga0257175_100346313300028673SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVLSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPDSLMEVAGRFATAAPGPHWTEEDDEGVEGS
Ga0307504_1039315313300028792SoilYTLEQILNAQKGISADGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTRVLSLAEAQDLFTTLGDPCPDTLMEVAGRFATAAPGPQQWTGEDDEGVEGS
Ga0307292_1045042823300028811SoilMSAVYTLEQILNTQTGLSVDGRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWILTLAEAQDLFTTLGDPCPDTLMEVAGRFATAAPGPQQWTPGPEQWEGDEGVEGS
(restricted) Ga0255311_106618913300031150Sandy SoilMSEVYTLEQILSGQQGLSRDGRAFCEALLTYGEVLAVRLSYLPEALLWLVTSPHQARIMRGHQPDVPILTLAEAQDLLTAVGDPRPGSLMEAAGRFAIAAPGTA
Ga0307469_1046649413300031720Hardwood Forest SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMYAHRPDTRVLTLAEAQDLFTTLGDPCPDNLMEVAGRFATAAPGPQQWTEED
Ga0307469_1048997823300031720Hardwood Forest SoilMTAVYTLEQIMNAQTRISVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLSEARDLLTTLGDPCPGNLMEVAAQFATAAPGAPQWTSSQESTDSRQEWAEDDEDTFGPA
Ga0307469_1219985313300031720Hardwood Forest SoilMSAVYTLEQILNRLDALSLEGQAFCRSLLSHGEVLAVQLSYLPEALLWLVTSPTQTRIMRAHQPGCMILTLAEAHDLFTAVGDPSPATLMEVAGRFATAAPGTPDWMDD
Ga0307468_10012231123300031740Hardwood Forest SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPDSLMEVAGRFATAAPGLHWTEEDDEGVEGS
Ga0307473_1000146683300031820Hardwood Forest SoilMTAVYTLEQIMNAQARLSVEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTMLGDPCPGNLMEVAARFATAAPGAPQWTGSQESTGSRQEWADDEDTFGPA
Ga0307473_1001651553300031820Hardwood Forest SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMYAHRPDTRVLTLAEAQDLFTTLGDPCPDNLMEVAGRFATAAPGPQQWTEQDDEGFEGS
Ga0310902_1111636313300032012SoilMSAVYTLEQILNRLDELSLDGQAFCRSLLSHGEVLAVQLSYLPEALLWLVTSPTQTRIMRAHQPECMILTLAEARDLFTALGDPCPASLMEVAGRFATAAPGTPEWKDDDVEP
Ga0307470_1012910213300032174Hardwood Forest SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTLGDPCPDSLMEVAGRFATAAPGPHWTEEDDEGVE
Ga0307470_1034167213300032174Hardwood Forest SoilMTAVYTLEQIMNARAGLSAEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEALDLLTTLGDPCPGSLMEVAAQFVTAAPGAPQWTGSQESTDSRQEWAEDDEDTFGPA
Ga0307471_10010239023300032180Hardwood Forest SoilMSAVYTLEQILNAQTGLSADSRAFCEALLTYGEVLAVRLSYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEAQDLFTTVGDPCPDSLMEVAGRFATAAPGPHWTEEDDEGVEGS
Ga0307471_10084530623300032180Hardwood Forest SoilMTAVYTLEQIMNARAGLSAEGRAFCEALLTYGEVLAVRLPYLPEGLLWLVSSPMQSRLMHAHRPDTWVLTLAEARDLLTTLGDPCPGNLMEVAAQFATAAPGAPQWTGSSESTDSRQEWAEDDEDTFGPS
Ga0310810_10007291193300033412SoilMSEVYTLEQILSGQQGLSRDGRAFCEALLTYGEVLAVRLSYLPEALLWLVTSPHQARIMRGHQPNVPILTLAEAQDLLTAVGDPWPGSLMEVAGRFAIAAPGTPEWREDDDEEEWA
Ga0310810_1012961713300033412SoilGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARVMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATAAPGAPQWSEDGDADGDPEECG
Ga0326726_1083270223300033433Peat SoilMSEVYTLEQILSGRQGLSRDGRAFCETLLTYGEVLAVRLSYLPEPLLWLVTSPHQVRIMRGHQPNVPILTLAEAQDLLTAVGDPCPGSLMEVAGRFAIAAPRTSGRPEDDDDEEWA
Ga0326726_1153929813300033433Peat SoilMSEVYTLEQILSGRQGLSRDGRAFCETLLTYGEVLAVRLSYLPEPLLWLVTSPHQVRIMRGHQPTVPILTLAEAQDLLTAVGDPCPGSLMEVAGRFAIAAPRTSGRREDD
Ga0316624_1218676413300033486SoilMSEVYTLQQILSNRQGLSRDGRAFCEALLTYGEVLAVRLSYLPETLLWLVTSPHQARIMRGHQPDVPILTLAEAQDLLTAVGDPRPGSLMEAAGRFAIAAPGT
Ga0326730_101721033300033500Peat SoilMSDVYTLEQILSGRQGLSRDGRAFCETLLTYGEVLAVRLSYLPEPLLWLVTSPHQVRIMRGHQPNVPILTLAEAQDLLTAVGDPCPGSLMEVAGRFAIAAPRTSGRPADDDDEEWA
Ga0316628_10039310423300033513SoilMSEVYTLQQILSNRQGLSRDGRAFCEALLTYGEVLAVRLSYLPETLLWLVTSPHQARIMRSHQPNVPILTLAEAQDLLTAVGDPRPGSLMEVARSFATAPPGMPEEDDDERWV
Ga0247829_1129584413300033550SoilMSAVYTLEQILSAQNGLSESSRAFCEALLTYGEVLAVRLSYFPEALVWLVTSPMQARIMRAHRPDAVILTLAESRDLLTTLGDPSPTTLMEVAGQLATSM
Ga0373948_0016695_567_9173300034817Rhizosphere SoilMSEVYTLQQILSGRQGLSRDGRAFCEALLTYGEVLAVRLGYLPEALLWLVTSPHQVRIMRAHQPDVPILTLAEAQDLLAAVGDPRPGSLMEVARTFATAPPGTPEPEEEDDDEEWV

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Biomedical Sciences Research Center "Alexander Fleming"
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