NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F051378

Metagenome / Metatranscriptome Family F051378

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F051378
Family Type Metagenome / Metatranscriptome
Number of Sequences 144
Average Sequence Length 47 residues
Representative Sequence MSLDSQTKEKIYSRVCELVTRKHFDPGMNGANWEELSKARRDQILQ
Number of Associated Samples 123
Number of Associated Scaffolds 144

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 89.58 %
% of genes near scaffold ends (potentially truncated) 98.61 %
% of genes from short scaffolds (< 2000 bps) 93.75 %
Associated GOLD sequencing projects 117
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(27.083 % of family members)
Environment Ontology (ENVO) Unclassified
(29.861 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(43.056 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.89%    β-sheet: 0.00%    Coil/Unstructured: 58.11%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 144 Family Scaffolds
PF12770CHAT 95.83
PF03551PadR 0.69
PF13181TPR_8 0.69
PF14684Tricorn_C1 0.69
PF13424TPR_12 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 144 Family Scaffolds
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.69
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.69
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.69

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459023|GZGNO2B02HYKM9All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105316349All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300000571|JGI1358J11329_10234766All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300001162|JGI12714J13572_1005685All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300002245|JGIcombinedJ26739_100877649All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300002914|JGI25617J43924_10048462All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1544Open in IMG/M
3300003324|soilH2_10100166All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2192Open in IMG/M
3300005174|Ga0066680_10581380All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia702Open in IMG/M
3300005174|Ga0066680_10961406All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia503Open in IMG/M
3300005187|Ga0066675_11333548All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia528Open in IMG/M
3300005561|Ga0066699_10360530All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300005569|Ga0066705_10481598All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia778Open in IMG/M
3300005576|Ga0066708_11064445All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia502Open in IMG/M
3300006050|Ga0075028_100441661All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia751Open in IMG/M
3300006086|Ga0075019_10861541All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia580Open in IMG/M
3300006173|Ga0070716_101685549All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia522Open in IMG/M
3300006176|Ga0070765_102244677All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia509Open in IMG/M
3300006755|Ga0079222_12252852All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia543Open in IMG/M
3300006797|Ga0066659_11444457All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia575Open in IMG/M
3300006800|Ga0066660_10464759All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1060Open in IMG/M
3300006806|Ga0079220_10633785All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia768Open in IMG/M
3300006893|Ga0073928_10934779All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia593Open in IMG/M
3300007265|Ga0099794_10291166All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300009012|Ga0066710_100515227All Organisms → cellular organisms → Bacteria1805Open in IMG/M
3300009088|Ga0099830_11357621All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300009137|Ga0066709_101465151All Organisms → cellular organisms → Bacteria988Open in IMG/M
3300009522|Ga0116218_1360795All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300010159|Ga0099796_10485347All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300010335|Ga0134063_10074912All Organisms → cellular organisms → Bacteria1510Open in IMG/M
3300010339|Ga0074046_10416606All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300010343|Ga0074044_10642231All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300010373|Ga0134128_11997435All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300010376|Ga0126381_100179545All Organisms → cellular organisms → Bacteria2811Open in IMG/M
3300010379|Ga0136449_100758290All Organisms → cellular organisms → Bacteria1613Open in IMG/M
3300010379|Ga0136449_101065926All Organisms → cellular organisms → Bacteria1291Open in IMG/M
3300010379|Ga0136449_103479910All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300010379|Ga0136449_103524543All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300010379|Ga0136449_104583594All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300010398|Ga0126383_10397219All Organisms → cellular organisms → Bacteria1414Open in IMG/M
3300011269|Ga0137392_11076737All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300011271|Ga0137393_11467649All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300012096|Ga0137389_10360383All Organisms → cellular organisms → Bacteria1238Open in IMG/M
3300012096|Ga0137389_10896143All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia761Open in IMG/M
3300012096|Ga0137389_11573498All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300012189|Ga0137388_11166200All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300012198|Ga0137364_10230684All Organisms → cellular organisms → Bacteria1364Open in IMG/M
3300012200|Ga0137382_10661216All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300012202|Ga0137363_10923128All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300012202|Ga0137363_11197433All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300012203|Ga0137399_10423421All Organisms → cellular organisms → Bacteria1112Open in IMG/M
3300012203|Ga0137399_10840361All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300012205|Ga0137362_10540131All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300012205|Ga0137362_11216832All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300012206|Ga0137380_10368397All Organisms → cellular organisms → Bacteria1279Open in IMG/M
3300012211|Ga0137377_10166507All Organisms → cellular organisms → Bacteria2114Open in IMG/M
3300012211|Ga0137377_10207751All Organisms → cellular organisms → Bacteria1880Open in IMG/M
3300012349|Ga0137387_10905742All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300012351|Ga0137386_10274932All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300012361|Ga0137360_10115476All Organisms → cellular organisms → Bacteria2079Open in IMG/M
3300012362|Ga0137361_10565628All Organisms → cellular organisms → Bacteria1043Open in IMG/M
3300012582|Ga0137358_11100075All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300012685|Ga0137397_10198668All Organisms → cellular organisms → Bacteria1492Open in IMG/M
3300012685|Ga0137397_10999496All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300012918|Ga0137396_10543625All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300012918|Ga0137396_10744738All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300012918|Ga0137396_11029529All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300012924|Ga0137413_10243595All Organisms → cellular organisms → Bacteria1231Open in IMG/M
3300012925|Ga0137419_10514549All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300012925|Ga0137419_11400066All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300012927|Ga0137416_10187209All Organisms → cellular organisms → Bacteria1652Open in IMG/M
3300012929|Ga0137404_10307151All Organisms → cellular organisms → Bacteria1377Open in IMG/M
3300014157|Ga0134078_10128392All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300014162|Ga0181538_10693654All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300014164|Ga0181532_10330259All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300014165|Ga0181523_10388739All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300014201|Ga0181537_10062312All Organisms → cellular organisms → Bacteria2528Open in IMG/M
3300015242|Ga0137412_10539592All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300015245|Ga0137409_11524062All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300015359|Ga0134085_10078383All Organisms → cellular organisms → Bacteria1352Open in IMG/M
3300016422|Ga0182039_11505788All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300017925|Ga0187856_1322396All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300017933|Ga0187801_10176492All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300017975|Ga0187782_10622322All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300018007|Ga0187805_10025214All Organisms → cellular organisms → Bacteria2619Open in IMG/M
3300018013|Ga0187873_1309334All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300018018|Ga0187886_1372152All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300018020|Ga0187861_10471912All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300018033|Ga0187867_10547980All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300018057|Ga0187858_10503052All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300018086|Ga0187769_10868078All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300018088|Ga0187771_10753901All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300018088|Ga0187771_11658746All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300018431|Ga0066655_11227098All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300018482|Ga0066669_10873891All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300020580|Ga0210403_10972685All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300020580|Ga0210403_11030664All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300020583|Ga0210401_11242609All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300021088|Ga0210404_10385921All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300021180|Ga0210396_10858383All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300021402|Ga0210385_11167083All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300021403|Ga0210397_10633850All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300021432|Ga0210384_10262445All Organisms → cellular organisms → Bacteria → Acidobacteria1555Open in IMG/M
3300021478|Ga0210402_11482536All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300021560|Ga0126371_13923354All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300022724|Ga0242665_10354474All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300024290|Ga0247667_1091958All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300025472|Ga0208692_1005090All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales5385Open in IMG/M
3300025921|Ga0207652_10165952All Organisms → cellular organisms → Bacteria1980Open in IMG/M
3300025939|Ga0207665_10379067All Organisms → cellular organisms → Bacteria1073Open in IMG/M
3300026277|Ga0209350_1150122All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300026317|Ga0209154_1205755All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300026551|Ga0209648_10137111All Organisms → cellular organisms → Bacteria1951Open in IMG/M
3300026557|Ga0179587_10158664All Organisms → cellular organisms → Bacteria1414Open in IMG/M
3300026999|Ga0207949_1020164All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300027583|Ga0209527_1113151All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300027605|Ga0209329_1067531All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300027729|Ga0209248_10055802All Organisms → cellular organisms → Bacteria1209Open in IMG/M
3300027795|Ga0209139_10286426All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300027875|Ga0209283_10568879All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300027911|Ga0209698_10183415All Organisms → cellular organisms → Bacteria1700Open in IMG/M
3300028806|Ga0302221_10553353All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300030760|Ga0265762_1153548All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300030862|Ga0265753_1104151All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300031057|Ga0170834_108441059All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300031090|Ga0265760_10106986All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300031231|Ga0170824_119899234All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300031236|Ga0302324_100911740All Organisms → cellular organisms → Bacteria1207Open in IMG/M
3300031446|Ga0170820_12394534All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300031446|Ga0170820_16478283All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300031474|Ga0170818_110229643All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300031474|Ga0170818_113930766All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300031474|Ga0170818_115413139All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300031670|Ga0307374_10255130All Organisms → cellular organisms → Bacteria1167Open in IMG/M
3300031671|Ga0307372_10362821All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300031770|Ga0318521_10435353All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300031771|Ga0318546_11110593All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300031942|Ga0310916_11222624All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300031954|Ga0306926_11747036All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300032770|Ga0335085_11767403All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300032892|Ga0335081_10224499All Organisms → cellular organisms → Bacteria2568Open in IMG/M
3300032892|Ga0335081_12397609All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300033290|Ga0318519_10310456All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300033405|Ga0326727_10200435All Organisms → cellular organisms → Bacteria2185Open in IMG/M
3300033755|Ga0371489_0428173All Organisms → cellular organisms → Bacteria601Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil27.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.94%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.86%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil4.86%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland4.17%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.17%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.47%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog2.78%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.78%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.08%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.08%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.08%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.08%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.39%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.39%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.39%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.39%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.39%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.39%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.39%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.39%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.39%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.69%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.69%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.69%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.69%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.69%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.69%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.69%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.69%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459023Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)EnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000571Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 mEnvironmentalOpen in IMG/M
3300001162Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017925Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018018Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150EnvironmentalOpen in IMG/M
3300018020Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024290Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08EnvironmentalOpen in IMG/M
3300025472Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026999Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027729Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027795Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028806Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1EnvironmentalOpen in IMG/M
3300030760Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030862Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031670Soil microbial communities from Risofladan, Vaasa, Finland - OX-3EnvironmentalOpen in IMG/M
3300031671Soil microbial communities from Risofladan, Vaasa, Finland - OX-1EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033755Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fractionEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FA3_105980102170459023Grass SoilMSLDIQMREKIYSRVCELVARKHFDPAMNGANWGELSKNRKDQILQSNTDDEFENRYRNC
INPhiseqgaiiFebDRAFT_10531634913300000364SoilMSLDSQAKEKIYSRVCELVARKHFDPGMNGANWDEVSKGRAGQILQSSTDEE
JGI1358J11329_1023476623300000571GroundwaterMSLDIQTREKIYSRLCNLVAQKHFDPGMNGANWEELSATRKDQILRSN
JGI12714J13572_100568523300001162Forest SoilMSLDVQMREKIYSRVCELVTKKHFDTGMNGANWEELSKARKDQILRSNSDEEFEKQIQ
JGIcombinedJ26739_10087764913300002245Forest SoilMSLDIQMREKIYSRVCELVARKHFDPAMNGANWGELSKN
JGI25617J43924_1004846223300002914Grasslands SoilMSLDIQSREKIYSRVCELVERNHFDPGMNGANWEELSKATKDKILQSSSDEEFEKQ
soilH2_1010016613300003324Sugarcane Root And Bulk SoilMSLERQAREKIYAKVSDLVKRKHFDPAMNGADWNSLVSARKDQIVGSGS
Ga0066680_1058138023300005174SoilMSLDAQAKEKIYSRVCELVTRRHFDPGMNGANWEELSKAR
Ga0066680_1096140623300005174SoilMSLDLQTREKIYSRVCDLVTRKHFDPGMNGANWEELSKASKDKILQS
Ga0066675_1133354813300005187SoilMSLDSQTKEKIYARVCELVTRKHFDPGMNGANWEELSKTRKDQILRSSTD
Ga0066699_1036053023300005561SoilMSLDTQAKENVYSRVCDLVTRKHFDPGMNGANWQE
Ga0066705_1048159823300005569SoilMSLDSQTKEKIYSRVCELVTRKHFDPGMNGANWEELSKARRDQILQSPN
Ga0066708_1106444523300005576SoilMSLDLQTKEKIYSRVCELVTRKHFDPGMNGANWEELSKARRDQILQ
Ga0075028_10044166123300006050WatershedsMSLDIQMREKIYSRVCELVARKHFDPAMNGANWGELSKDRKDQILQSNTDDEFEKQIQEL
Ga0075019_1086154123300006086WatershedsMSLDSQTKEKIYSRVCELVARKHFDPGMNGANWKELSKARRDQILQSPNDEEFEKQIQ
Ga0070716_10168554923300006173Corn, Switchgrass And Miscanthus RhizosphereMSLDAQAKEKIYSRVCELVTRKHFDPGMNGANWEELSKARR
Ga0070765_10224467723300006176SoilMSLDIQAREKIYTRVCDLVLRKHFDPGMNGANWEELSKTRKDQILRSSNDEEFEKQI
Ga0079222_1225285223300006755Agricultural SoilMSLDSQTKAKIYSRVCELVTRKHFDPGMNGANWEELSKARRDQI
Ga0066659_1144445713300006797SoilMSLEAQAKEKVYLRVCDLVTRRHFDPGMNGANWEQLSKARRDQV
Ga0066660_1046475913300006800SoilMSLDNQAKGKVLTRVCELVKKKHFDPGMNGANWEELSKSRRDQILRNNSDEEFEKQKQDSAAS
Ga0079220_1063378523300006806Agricultural SoilMSLDSQTKEKIYSRVCELVTRKHFDPGMNGANWEELSKA
Ga0073928_1093477923300006893Iron-Sulfur Acid SpringMSLELQAREKIYARVSELVKRKHFDPGMNGADWNALASARRD
Ga0099794_1029116623300007265Vadose Zone SoilMSLDSQAKEKIYSRVCELVARKHFNPGMNGANWEELSKSRKEQILSTNSDEDFENKV
Ga0066710_10051522713300009012Grasslands SoilMSLEPQAKEKIYSRVCELVTRKHFDPAMNGANWEELSKMRRD
Ga0099830_1135762123300009088Vadose Zone SoilMSLDAQAKEKIYSRVCELVARKHFDPGMYGANWEELSKAK
Ga0066709_10146515113300009137Grasslands SoilMSLDIQTREKIYTRVCDLVLRKHFDPGMNGANWEELSKGRRDQILRSTSD
Ga0116218_136079513300009522Peatlands SoilMSLDVQAKEKVYSRVCELVTRKHFDPGMNGANWEE
Ga0099796_1048534723300010159Vadose Zone SoilMSLDNQAREKVYSRVCELVARKHFDPGMNGANWDELSKSRRD
Ga0134063_1007491223300010335Grasslands SoilMSLDAQAKEKIYSRVCDLVTRKHFDPGMNGANWEELSKA
Ga0074046_1041660623300010339Bog Forest SoilMSLDSQTKEKIYSRVCELVTRKHFDPGMNGANWEELSKARRDQILRSNTD
Ga0074044_1064223123300010343Bog Forest SoilMSLDIQMREKIYSRVCELVTKKHFDTGMNGANWEELSKAKKD
Ga0134128_1199743523300010373Terrestrial SoilMSLDVQMREKIYSRVCELVTKKHFDPAMNGANWGELSKDRKGQ
Ga0126381_10017954513300010376Tropical Forest SoilMTLGSQARQKIYSRVCQLVTRKHFDPGMNGANWEELS
Ga0136449_10075829023300010379Peatlands SoilMSLDLQTKEKIYSRVCELVTRKHFDPGMNGANWEE
Ga0136449_10106592623300010379Peatlands SoilMSLDIKMREKIYSRVCDLVAGKHFDPAMNGANWGELSKDRKDQILQSNTDDEFEKQIQ
Ga0136449_10347991013300010379Peatlands SoilMSLDAQTKEKIYSRVCQLVTRKHFDPGMYGANWEELSKARRNQILQSASDEEFEKQIQE
Ga0136449_10352454323300010379Peatlands SoilMSLDLQTKEKIYSRVCELVTRKHFDPGMNGANWEELCKTR
Ga0136449_10458359423300010379Peatlands SoilMSLDLQTKEKIYSRVCELVTRKQFDPGMNGANWEELSKARRDQILRSTSD
Ga0126383_1039721923300010398Tropical Forest SoilMSLDAQAKEKVYDRVCDLVTRKHFDPGMYGANWQELSRARRDQVLRSGSDEEYEKQIQDLLA
Ga0137392_1107673723300011269Vadose Zone SoilMTLSLQARKKICDRVCQLVTRKHFDPGMNGADWEELSNARKDQILR
Ga0137393_1146764913300011271Vadose Zone SoilMSLDIQMREKIYSRVCELVARKHFDPAMNGANWGELSKDRKDQILQSNTDDEFENQIQEL
Ga0137389_1036038323300012096Vadose Zone SoilMSLDAQAKEKIYSRVCELVARKHFDPGMYGANWEELS
Ga0137389_1089614323300012096Vadose Zone SoilMSLDSQTKEKIYARVCELVTRKHFDPGMNGANWEELSKTRKDQILRSSSDEEFEKQ
Ga0137389_1157349813300012096Vadose Zone SoilMSLDNQAREKVYSRVCEVVARKNFDPGMNGANWDELSRS
Ga0137388_1116620023300012189Vadose Zone SoilMSLDIQSREKIYSRVCELVTRKHFDPGMNGANWEELSKTRKDKILQS
Ga0137364_1023068423300012198Vadose Zone SoilMMPLDAEAKEKIYSRVCDLVTCKHFDPGMNGANWEELSKARRDEILRSSTDEEFEKKI
Ga0137382_1066121623300012200Vadose Zone SoilMMTLDAQAKEKIYSRVCDLVTRKHFDPGMYGANWEELSKAKR
Ga0137363_1092312823300012202Vadose Zone SoilMSLDSQTKEKIYSRVCELVTRKHFDPGMNGANWEELSKARRDQI
Ga0137363_1119743313300012202Vadose Zone SoilMSLDIQMREKIYSRVCELVERKHFDPAMNGANWGELSKGRKDQILQSNTDDEFEKQI
Ga0137399_1042342123300012203Vadose Zone SoilMSLDSQTKEKIYSRVCELVARKHFDPGMNGANWEELSKARRDQILQSLNDEEFE
Ga0137399_1084036113300012203Vadose Zone SoilMSLDIQTREKIYTRVCDLVLRKHFDPGMNGANWEELSKGRRDQILRSTSDEEFE
Ga0137362_1054013113300012205Vadose Zone SoilMSLDVQMRDKIYSRVCELVARKHFDPGMNGANWEELSKSRKEQILST
Ga0137362_1121683213300012205Vadose Zone SoilMSLDIQKREKIYSRVCELVARKHFDPAMNGANWGELSKNRRDQILQSNTDDEF
Ga0137380_1036839713300012206Vadose Zone SoilMSVDIQMREKIYSRVCDLVARKHFDPAMNGANWDELSKTRKDQILRSNT
Ga0137377_1016650713300012211Vadose Zone SoilMSLDLQTKEKIYSRVSELVTRKHFDPGMNGANWEELSKARKDQILR
Ga0137377_1020775123300012211Vadose Zone SoilMSLEAQTKEKIYSRVCELVTRKHFDPGMNGANWEELSKARRD
Ga0137387_1090574213300012349Vadose Zone SoilMSLDSQTKEKIYARVCDLVTRKHFDPCMNGANWDELSKARRDQILR
Ga0137386_1027493223300012351Vadose Zone SoilMSLDIQMREKIYSRVCELVARKHFDPAMNGANWGEL
Ga0137360_1011547623300012361Vadose Zone SoilMSLDSQTKEKIYSRVCELVTRKHFDPGMNGANWEELSKARRDQILQSPNDEEFE
Ga0137361_1056562823300012362Vadose Zone SoilMSLDAQAKEKIYSRVCELVTRKHFDPGMNGANWEELSKARRDQILQSP
Ga0137358_1110007513300012582Vadose Zone SoilMSLDLQTKEKIYSRVSELVTRKHFDPGMNGANWEELSKARKDQILRSSTDE
Ga0137397_1019866823300012685Vadose Zone SoilMSLDVQMREKIYSRVCELVTKKHFDTAMNGANWEELSKARKDQILRSNSDEEFEKQ
Ga0137397_1099949613300012685Vadose Zone SoilMSLDIQMREKIYSRVCELVARKHFDPAMNGANWGELSKDRKDQILQSNTDDEFEKQIQELLN
Ga0137396_1054362523300012918Vadose Zone SoilMSLDLQTKENIYCRVRELVTRKHFDPGMNGANWEELSKARKDQILHSSTDEEFEKQVQS*
Ga0137396_1074473813300012918Vadose Zone SoilMSLDSQTKEKIYSRVCELVTRRHFDPGMNGANWLE
Ga0137396_1102952913300012918Vadose Zone SoilMSLDIQMREKVYSRVCELVVRKHFDPGMNGANWDE
Ga0137413_1024359523300012924Vadose Zone SoilMSLEAQPKEKVYSRVCDLVTRKHFDPGMNGANWEELSKARRDQILQSPNDEEFEKQ
Ga0137419_1051454923300012925Vadose Zone SoilMSLDSQTKEKIYSRVCDLVARKHFDPAMNGANWGELSKDRKDQILQS
Ga0137419_1140006613300012925Vadose Zone SoilMSLDVQMREKIYSRVCELVARKHFDPAMNGANWGALSKDRTDQIL
Ga0137416_1018720913300012927Vadose Zone SoilMSLDSQTKEKIYSRVCELVTRKHFDPGMNGANWEELSKARRDQILQSLND
Ga0137404_1030715123300012929Vadose Zone SoilMSLDSQTKEKIYSRVCELVTRRHFDPGMNGANWEELSKARRDQILQSPNDEEFEK
Ga0134078_1012839223300014157Grasslands SoilMSLDSQTKEKIYSRVCELVTRKHFDPGMNGANWEELSKARRDQILQ
Ga0181538_1069365423300014162BogMSLDAQTKEKIYSRVCQLVTRKHFDPGMNGANWEELSKGRKDQILRTTSDEEF
Ga0181532_1033025923300014164BogMSLDIQTREKIYARVCDLVSRKHFDPGMNGANWEELSKTRKDQ
Ga0181523_1038873923300014165BogMSLDLQTKEKIYSRVCELVTRKHFDPGMNGANWEEL
Ga0181537_1006231223300014201BogMSLDNPARAKIYSRVSELVLRKHFDPAMNGADWTALASARRDEALQSGT
Ga0137412_1053959213300015242Vadose Zone SoilMSLDSQSKEKIYSRVCELVARKHFDPGMNGANWDELSKDRAGQI
Ga0137409_1152406223300015245Vadose Zone SoilMSLDIQTREKIYSRVCELVARKHFDPAMNGANWEELSKTRKGQILRSQSDEEFEK
Ga0134085_1007838323300015359Grasslands SoilMNLDIQTREKIYSRVCELVTRKHFDPGMSGANWEELSKARKDKILQ
Ga0182039_1150578813300016422SoilMSHDSHAKEKVYSRVCQLVASKHFDPGMNGVNWEELSTTRRVQILCSGSDE
Ga0187856_132239623300017925PeatlandMSLDIQSREKIYARVCELVTRKHFDPGMNGADWATLASTRKDQILRS
Ga0187801_1017649223300017933Freshwater SedimentMSLDNQAKDKVYSRVCELVTRKHFDPGMNGTNWEELSKARRGQILRSTNDEEFEK
Ga0187782_1062232213300017975Tropical PeatlandMSLDNQTREKVYSRVCDLVTRKHFDPAMNGANWEELSKARRDQILQSSSDEEFEK
Ga0187805_1002521423300018007Freshwater SedimentMSLDNQAREKVYSHVCELVTRKHFDPGMYGANWEELSKAR
Ga0187873_130933413300018013PeatlandMSLDLQTKEKIYSRVCELVTRKHFDPGMNGANWEELCKTRKDQI
Ga0187886_137215213300018018PeatlandMSLDVQAKEKVYSRVCELVTRKHFDPGMNGANWKELSLARRNQILQSTSDEEFEKQIQDL
Ga0187861_1047191213300018020PeatlandMSLDLQTKEKIYSRVCELVTRKHFDPGMNGANWEELCKTRKDQILRSGTDEE
Ga0187867_1054798023300018033PeatlandMSLDIQSRENIYARVCELVTRKHFDPGMNGTNWEELSKARKDQILRTASDEEFEK
Ga0187858_1050305223300018057PeatlandMSLDIQSREKIYARVCELVTRKHFDPGMNGADWATLASTRRDQILRNGNDEE
Ga0187769_1086807823300018086Tropical PeatlandMSLDNQAKEKVYSRVCELVTRKHFDPAMYGANWGELSKARRDQILQSTTDEEFEKHIQDL
Ga0187771_1075390123300018088Tropical PeatlandMSLDNQAKEKVYSRVCDLVTRKHFDPAMNGANWEELSKARRAQVLQSASD
Ga0187771_1165874613300018088Tropical PeatlandMSLDVHTKEKIYTRVCELVTQKHFDPGMNGANWEELSKTRKDQILRSRTDEEFEKQ
Ga0066655_1122709813300018431Grasslands SoilMSLDSQTKAKIYSRVCELVTRRHFDPGMNGANWEELYKGRKDQILRSNSDEEFEKQIQ
Ga0066669_1087389113300018482Grasslands SoilMSLDVQAKEKVYSRVCELVTRKHFDPGMNGANWDEL
Ga0210403_1097268513300020580SoilMSLDSQTKEKIYSRVCELVARKHFDPGMNGANWEELS
Ga0210403_1103066423300020580SoilMSLDSQTKEKIYSRVCELVTRRHFDPGMNGANWEEL
Ga0210401_1124260923300020583SoilMSLDSQTKEKIYSRVCELVTRKHFDPGMNGANWEELS
Ga0210404_1038592123300021088SoilMSLDSQTKEKIYSRVCELVARKHFDPRMNGANWEELS
Ga0210396_1085838313300021180SoilMSLDAQAKEKIYSRVCELVTRKHFDPGMNGTNWEELSKTRKGQI
Ga0210385_1116708323300021402SoilMSLDAQAKEKVYSRVCDLVTRKHFDPGMNGANWDDLSKSRRDQVLRSTTDE
Ga0210397_1063385023300021403SoilMSLDSQTKEKIYARVCELVTRKHFDPGMNGVNWDELSKARRDQILRSTSDE
Ga0210384_1026244523300021432SoilMSLDSQTKEKIYSRVCELVTRKHFDPGMNGANWEELSKTRKDQILRSGSDEEFEKQIQ
Ga0210402_1148253613300021478SoilMSLDNQAREKIYSRVCQLVARKHFDPAMNGANWEELSASRKDQILE
Ga0126371_1392335423300021560Tropical Forest SoilMSLELQAREKIYARVSELVKRKHFDPGMNGADWDALASARRDDVLRSA
Ga0242665_1035447423300022724SoilMSLDSQTKEKIYSRVCELVARKHFDPGMNGANWEELSKARKDQILRSSS
Ga0247667_109195823300024290SoilMSLDSQTKEKIYSRVCELVTRRHFDPGMNGANWEELSKARRDQVLQSPNDEE
Ga0208692_100509043300025472PeatlandMSLDVQAKEKVYSRVCELVTRKHFDPGMNGANWKELSLARRNQILQSTSDEEFEKQ
Ga0207652_1016595233300025921Corn RhizosphereMSLDVQMREKIYSRVCELVTKKHFDPAMNGANWGELSKD
Ga0207665_1037906723300025939Corn, Switchgrass And Miscanthus RhizosphereMSLDAQAKEKIYSRVCELVTRKHFDPGMNGANWEELSKARRGQILQSASDD
Ga0209350_115012213300026277Grasslands SoilMSLDAQAKEKVYSRVCDLVTRKHFDPGMNGANWEELSKGRREEILRS
Ga0209154_120575513300026317SoilMSLDAQAKEKVYSRVCDLVTRKHFDPGMNGANWEELSKGRREEILRSA
Ga0209648_1013711123300026551Grasslands SoilMSLEAQAKEKVYSRVCDLVTRKHFDPGMNGANWEEL
Ga0179587_1015866423300026557Vadose Zone SoilMSLDLQTKEKIYSRVSELVTRKHFDPGMNGANWEELSKARRDQILRSTSDEE
Ga0207949_102016413300026999Forest SoilMSLDSQTKEKIYSRVCELVARKHFDPGMNGANWEELSKARKDQILRSSSDE
Ga0209527_111315113300027583Forest SoilMSLNSQTKEKIYSRVCELVTRRHFDPGMNGANWEELSSTRK
Ga0209329_106753123300027605Forest SoilMSLDSQTKEKIYSRVSELVTRKHFDPGMNGANWEELSKTRKDQILR
Ga0209248_1005580223300027729Bog Forest SoilMSLDIQMREKIYSRVCELVARKHFDPAMNGANWGELSKDRKDQILQSNTDD
Ga0209139_1028642623300027795Bog Forest SoilMSLDIQMREKIYSRVCELVARKHFDPAMNGANWGE
Ga0209283_1056887923300027875Vadose Zone SoilMSLDSQTKEKIYSRVCELVTRKHFDPGMNGANWEELSKT
Ga0209698_1018341513300027911WatershedsMSLDIQMREKIYSRVCELVARKHFDPAMNGANWGELSKNRKDQI
Ga0302221_1055335313300028806PalsaMSLDIESREKIYARVRELVTRKHFDPGMNGVDWSTLAST
Ga0265762_115354823300030760SoilMSLDIQMREKIYSRVCELVERKHFDPAMNGANWGELSKGRKDQILQSNT
Ga0265753_110415113300030862SoilMSLDAQTKEKIYSRVCQLVTRKHFDPGMYGANWEEL
Ga0170834_10844105913300031057Forest SoilMSLGTQAREKIYSRVCQLVTRKHFDPAINGANWEELSANRKDR
Ga0265760_1010698613300031090SoilMSLDSQMKEKIYSRVCELVKRKHFDPGMNGANWEEFSKAR
Ga0170824_11989923413300031231Forest SoilMSLDSQTKEKIYSRVCELVARKHFDPGMNGANWEELSKTRKDQILRSSS
Ga0302324_10091174023300031236PalsaMNLDIQSREKIYARVCELVTRKHFDPGMNGADWATL
Ga0170820_1239453413300031446Forest SoilMSLDSQTKEKIYSRVCELVARKHFDPGMNGANWEELSKAR
Ga0170820_1647828313300031446Forest SoilMNLGTQAREKIYSRVCQLVTRKHFDPAMNGANWEELSAN
Ga0170818_11022964323300031474Forest SoilMSLDIQMREKIYSRVCELVARKHFDPALNGANWGELSKNRKDQILQSNTDDEFEKQIQDLLN
Ga0170818_11393076613300031474Forest SoilMSLDAQAKEKIYSRVCDLVTRKHFDPGMYGANWEELSKAKRNQIVQSAS
Ga0170818_11541313913300031474Forest SoilMSLGTQAREKIYSRVCQLVTRKHFDPAMNGANWEELSAN
Ga0307374_1025513013300031670SoilMSLDTKAREKIYARVCEFVEHKHFDPGMNGANWRELSENRKEQ
Ga0307372_1036282113300031671SoilMTLDANTREKIYTRVCELVERRHFDPGMSGANWQELSE
Ga0318521_1043535313300031770SoilMSLNNQAREKIYSRVSQLVTRKHFDPGMNGANWEELSTSRRDQIL
Ga0318546_1111059323300031771SoilMSLDNHAREKIYSRVCWLVARKHFDPGMNGANWEELSASRRDQILRSTSDEEFE
Ga0310916_1122262423300031942SoilMSLDNHAREKIYSRVCWLVARKHFDPGMNGANWEELSGSRRDQI
Ga0306926_1174703613300031954SoilMSLDNQAREKIYSRVCQLVARKHFDPAMNGANWEELSAGRRDQILRSNNDEEF
Ga0335085_1176740323300032770SoilMSLNIQTREKIYSRVCDLVTRKHFDPGMNGANWEELSKS
Ga0335081_1022449923300032892SoilMSLDAQAKEKIYSRLCDLVTRKHFDPAMNGANWAELSKARRD
Ga0335081_1239760923300032892SoilMSLDAQTREKIYSRVCDLVTRKHFDPGMNGANWEELSKSWKDRILQS
Ga0318519_1031045613300033290SoilMSLNNQAREKIYSRVSQLVTRKHFDPGMNGANWEELSTSRRDQILRSN
Ga0326727_1020043523300033405Peat SoilMSLDLQTKEKIYSRVCELVTRKHFDPGMNGANWEELSEAR
Ga0371489_0428173_454_6003300033755Peat SoilMSLDLQTKEKIYSRVCELVTRKHFDPGMNGANWEELCKTRKDQILRSST

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.