Metagenome / Metatranscriptome Family F051217

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051217
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	45 residues
Representative Sequence	VRASYFPNKAALPASTLLQISRLANPAYLVEVEAIAILPPKA
Number of Associated Samples	120
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.56 %
% of genes near scaffold ends (potentially truncated)	84.03 %
% of genes from short scaffolds (< 2000 bps)	95.14 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.750 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (27.083 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.29% β-sheet: 0.00% Coil/Unstructured: 95.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF01042	Ribonuc_L-PSP	6.99
PF01425	Amidase	2.10
PF00903	Glyoxalase	1.40
PF06707	DUF1194	1.40
PF03069	FmdA_AmdA	1.40
PF01799	Fer2_2	1.40
PF07298	NnrU	1.40
PF08840	BAAT_C	1.40
PF01432	Peptidase_M3	1.40
PF14087	DUF4267	1.40
PF01804	Penicil_amidase	1.40
PF12680	SnoaL_2	1.40
PF01124	MAPEG	0.70
PF17172	GST_N_4	0.70
PF00497	SBP_bac_3	0.70
PF04392	ABC_sub_bind	0.70
PF10691	DUF2497	0.70
PF01738	DLH	0.70
PF00805	Pentapeptide	0.70
PF09084	NMT1	0.70
PF03544	TonB_C	0.70
PF01609	DDE_Tnp_1	0.70
PF02371	Transposase_20	0.70
PF11533	DUF3225	0.70
PF01717	Meth_synt_2	0.70
PF14821	Thr_synth_N	0.70
PF00248	Aldo_ket_red	0.70
PF07731	Cu-oxidase_2	0.70
PF05638	T6SS_HCP	0.70
PF07702	UTRA	0.70
PF11604	CusF_Ec	0.70
PF13683	rve_3	0.70
PF00690	Cation_ATPase_N	0.70
PF00753	Lactamase_B	0.70
PF07883	Cupin_2	0.70
PF07690	MFS_1	0.70
PF10009	DUF2252	0.70
PF04545	Sigma70_r4	0.70
PF01527	HTH_Tnp_1	0.70
PF00326	Peptidase_S9	0.70
PF13924	Lipocalin_5	0.70
PF01935	DUF87	0.70
PF04002	RadC	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	6.99
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	2.10
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	1.40
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	1.40
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.40
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	1.40
COG4094	Uncharacterized membrane protein	Function unknown [S]	1.40
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.70
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.70
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.70
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.70
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.70
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.70
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.70
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.70
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.70
COG3157	Type VI protein secretion system component Hcp (secreted cytotoxin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.70
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.70
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.70
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.70
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.70
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.70
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.70
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.75 %
Unclassified	root	N/A	31.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.75 %
Unclassified	root	N/A	31.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.75 %
Unclassified	root	N/A	31.25 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.22 %
Unclassified	root	N/A	31.25 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.11 %
Unclassified	root	N/A	31.25 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.08 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.25 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	16.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.42 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.08 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.69 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.97 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.47 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.08 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.39 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.69 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.69 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.69 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.69 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.97 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.78 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.39 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.69 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.69 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	0.69 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.69 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.97 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.39 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.39 %
Bosea lathyri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → Bosea lathyri	0.69 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.69 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.69 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.69 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.97 %
Bradyrhizobium sp. Cp5.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Cp5.3	1.39 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.39 %
Mesorhizobium sp. WSM3873	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. WSM3873	0.69 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.69 %
Bosea lathyri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → Bosea lathyri	0.69 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.69 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001431\|F14TB_100946743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1478	Open in IMG/M
3300001686\|C688J18823_10853358	Not Available	578	Open in IMG/M
3300004480\|Ga0062592_101898799	Not Available	585	Open in IMG/M
3300004633\|Ga0066395_10469962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Cp5.3	720	Open in IMG/M
3300005332\|Ga0066388_101577154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1154	Open in IMG/M
3300005332\|Ga0066388_103224756	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300005332\|Ga0066388_107621975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300005332\|Ga0066388_107922523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300005364\|Ga0070673_100617759	All Organisms → cellular organisms → Bacteria → Proteobacteria	990	Open in IMG/M
3300005436\|Ga0070713_100657242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	999	Open in IMG/M
3300005447\|Ga0066689_10557724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300005576\|Ga0066708_10543135	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300005591\|Ga0070761_10928543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	551	Open in IMG/M
3300005719\|Ga0068861_101707132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	623	Open in IMG/M
3300005764\|Ga0066903_103846464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	806	Open in IMG/M
3300005764\|Ga0066903_107782556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	551	Open in IMG/M
3300006046\|Ga0066652_100695645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Cp5.3	967	Open in IMG/M
3300006237\|Ga0097621_101748392	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300006800\|Ga0066660_10407172	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300006853\|Ga0075420_101527136	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300006893\|Ga0073928_10740970	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300006904\|Ga0075424_102881905	Not Available	500	Open in IMG/M
3300006953\|Ga0074063_12938049	Not Available	844	Open in IMG/M
3300007076\|Ga0075435_101809671	Not Available	536	Open in IMG/M
3300009090\|Ga0099827_10015929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5069	Open in IMG/M
3300009090\|Ga0099827_11857400	Not Available	525	Open in IMG/M
3300009100\|Ga0075418_10140206	All Organisms → cellular organisms → Bacteria → Proteobacteria	2572	Open in IMG/M
3300009100\|Ga0075418_12332796	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300009143\|Ga0099792_10242219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1046	Open in IMG/M
3300009143\|Ga0099792_10420564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	822	Open in IMG/M
3300009553\|Ga0105249_12190069	Not Available	626	Open in IMG/M
3300009789\|Ga0126307_10440436	Not Available	1051	Open in IMG/M
3300009792\|Ga0126374_11248141	Not Available	598	Open in IMG/M
3300009792\|Ga0126374_11491857	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300009840\|Ga0126313_10820345	Not Available	757	Open in IMG/M
3300010037\|Ga0126304_11203921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300010041\|Ga0126312_10188191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1441	Open in IMG/M
3300010043\|Ga0126380_11852119	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300010046\|Ga0126384_10902310	Not Available	798	Open in IMG/M
3300010046\|Ga0126384_11549124	Not Available	622	Open in IMG/M
3300010358\|Ga0126370_10727806	Not Available	875	Open in IMG/M
3300010358\|Ga0126370_11614988	Not Available	621	Open in IMG/M
3300010358\|Ga0126370_12379231	Not Available	526	Open in IMG/M
3300010359\|Ga0126376_10220790	Not Available	1588	Open in IMG/M
3300010359\|Ga0126376_12693469	Not Available	546	Open in IMG/M
3300010359\|Ga0126376_12855008	Not Available	533	Open in IMG/M
3300010360\|Ga0126372_11876433	Not Available	644	Open in IMG/M
3300010361\|Ga0126378_11054207	Not Available	915	Open in IMG/M
3300010361\|Ga0126378_11959449	Not Available	667	Open in IMG/M
3300010362\|Ga0126377_11771508	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300010362\|Ga0126377_13536537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300010366\|Ga0126379_13025706	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300010366\|Ga0126379_13672082	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300010376\|Ga0126381_104222766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300010398\|Ga0126383_11744316	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300010398\|Ga0126383_13657340	Not Available	502	Open in IMG/M
3300010399\|Ga0134127_12077171	Not Available	647	Open in IMG/M
3300010400\|Ga0134122_12823428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300011269\|Ga0137392_10409557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. WSM3873	1126	Open in IMG/M
3300011332\|Ga0126317_10865713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300011423\|Ga0137436_1059633	All Organisms → cellular organisms → Bacteria → Proteobacteria	982	Open in IMG/M
3300012207\|Ga0137381_11068787	Not Available	695	Open in IMG/M
3300012212\|Ga0150985_114373562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300012285\|Ga0137370_10900468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300012359\|Ga0137385_10339829	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300012360\|Ga0137375_10220586	Not Available	1776	Open in IMG/M
3300012911\|Ga0157301_10283433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300012924\|Ga0137413_10366814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1026	Open in IMG/M
3300012927\|Ga0137416_11471038	Not Available	618	Open in IMG/M
3300012929\|Ga0137404_11190428	Not Available	701	Open in IMG/M
3300012948\|Ga0126375_11660177	Not Available	552	Open in IMG/M
3300012955\|Ga0164298_11142086	Not Available	586	Open in IMG/M
3300012960\|Ga0164301_10010237	All Organisms → cellular organisms → Bacteria	3751	Open in IMG/M
3300012961\|Ga0164302_10362621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	973	Open in IMG/M
3300012971\|Ga0126369_10678775	Not Available	1106	Open in IMG/M
3300012971\|Ga0126369_12804593	Not Available	570	Open in IMG/M
3300012985\|Ga0164308_10996150	Not Available	744	Open in IMG/M
3300014166\|Ga0134079_10676995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300014501\|Ga0182024_10320147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2040	Open in IMG/M
3300014969\|Ga0157376_11132234	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300015054\|Ga0137420_1391901	All Organisms → cellular organisms → Bacteria	5774	Open in IMG/M
3300015371\|Ga0132258_11179186	Not Available	1936	Open in IMG/M
3300015371\|Ga0132258_11750616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1567	Open in IMG/M
3300015372\|Ga0132256_100678311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1146	Open in IMG/M
3300015374\|Ga0132255_105153483	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300016294\|Ga0182041_10777966	All Organisms → cellular organisms → Bacteria → Proteobacteria	854	Open in IMG/M
3300016357\|Ga0182032_11320368	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	623	Open in IMG/M
3300016371\|Ga0182034_11608297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300016387\|Ga0182040_11572579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300017972\|Ga0187781_10261335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1226	Open in IMG/M
3300017997\|Ga0184610_1261130	Not Available	574	Open in IMG/M
3300018076\|Ga0184609_10315293	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300018081\|Ga0184625_10084048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1631	Open in IMG/M
3300018466\|Ga0190268_11950654	Not Available	537	Open in IMG/M
3300020582\|Ga0210395_11131454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300021168\|Ga0210406_11326749	Not Available	517	Open in IMG/M
3300021170\|Ga0210400_10210373	Not Available	1583	Open in IMG/M
3300021171\|Ga0210405_10056863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3091	Open in IMG/M
3300021180\|Ga0210396_10313751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1387	Open in IMG/M
3300021403\|Ga0210397_10536593	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300022557\|Ga0212123_10614939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300025927\|Ga0207687_11121206	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300025928\|Ga0207700_10276600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1443	Open in IMG/M
3300025928\|Ga0207700_11361520	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300025939\|Ga0207665_11030406	Not Available	655	Open in IMG/M
3300025960\|Ga0207651_11046510	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300026035\|Ga0207703_11426167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	666	Open in IMG/M
3300026088\|Ga0207641_12461062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300027654\|Ga0209799_1024230	All Organisms → cellular organisms → Bacteria → Proteobacteria	1335	Open in IMG/M
3300027654\|Ga0209799_1024230	All Organisms → cellular organisms → Bacteria → Proteobacteria	1335	Open in IMG/M
3300027824\|Ga0209040_10115172	All Organisms → cellular organisms → Bacteria → Proteobacteria	1499	Open in IMG/M
3300027862\|Ga0209701_10530519	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300027903\|Ga0209488_10007799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → Bosea lathyri	8005	Open in IMG/M
3300028718\|Ga0307307_10180431	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
3300028819\|Ga0307296_10307789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	864	Open in IMG/M
3300028880\|Ga0307300_10193926	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300030617\|Ga0311356_12022519	Not Available	509	Open in IMG/M
3300031538\|Ga0310888_10756670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300031726\|Ga0302321_101430876	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300031731\|Ga0307405_11390765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	613	Open in IMG/M
3300031740\|Ga0307468_101575631	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300031744\|Ga0306918_10802109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300031744\|Ga0306918_11340668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300031770\|Ga0318521_10276415	Not Available	985	Open in IMG/M
3300031771\|Ga0318546_10721726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300031780\|Ga0318508_1247501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300031833\|Ga0310917_11095472	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300031879\|Ga0306919_11320356	Not Available	546	Open in IMG/M
3300031890\|Ga0306925_11361473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	702	Open in IMG/M
3300031910\|Ga0306923_10291547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1865	Open in IMG/M
3300031912\|Ga0306921_11323528	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300031954\|Ga0306926_11513475	Not Available	774	Open in IMG/M
3300032003\|Ga0310897_10030492	Not Available	1815	Open in IMG/M
3300032012\|Ga0310902_10380653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	893	Open in IMG/M
3300032013\|Ga0310906_10824019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	657	Open in IMG/M
3300032044\|Ga0318558_10496192	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300032060\|Ga0318505_10475886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300032063\|Ga0318504_10118047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1202	Open in IMG/M
3300032068\|Ga0318553_10385765	Not Available	734	Open in IMG/M
3300032180\|Ga0307471_102715487	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300032180\|Ga0307471_103613669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300032261\|Ga0306920_100819606	Not Available	1365	Open in IMG/M
3300032261\|Ga0306920_101927728	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300032828\|Ga0335080_11333987	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.11%
Host-Associated	Host-Associated	13.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.56%
Plants	Host-Associated → Plants	13.89%
Aquatic	Environmental → Aquatic	5.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.86%
Sediment	Environmental → Aquatic → Sediment	2.78%
Freshwater	Environmental → Aquatic → Freshwater	1.39%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.39%
Peat	Environmental → Terrestrial → Peat	1.39%
Roots	Host-Associated → Plants → Roots	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.97%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.08%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.69%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.08%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.39%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.47%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.08%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.08%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.39%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.39%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.69%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.69%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.69%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.69%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TB_1009467431	3300001431	Soil	NAAEYRTVRASYFPNRSALPASTLLQVPRLANPAYLLEVEGIAVLPPRA*
C688J18823_108533582	3300001686	Soil	RASYFPNRSALPASTLLQVPRLANTAYLLEVEVIAVLPPRA*
Ga0062592_1018987992	3300004480	Soil	LEANAAAYREVRAMYFKNKAALPGHTLLQISRLANPAYQIELEFIAILPPKA*
Ga0066395_104699621	3300004633	Tropical Forest Soil	AEVYREVRASFFSNKSTLPASTLLQITRLANPSYLIEVDATAILPPRT*
Ga0066388_1015771541	3300005332	Tropical Forest Soil	YREVRASFFPNKSALPASTLLQITRLANPSYLIEVDATAILPPRT*
Ga0066388_1032247562	3300005332	Tropical Forest Soil	GSYFPNKAALPGHTLLQISRLANPAYQLEVEIIAILPPKA*
Ga0066388_1076219752	3300005332	Tropical Forest Soil	AEFREVRASYFPNRSALPASTLLQVPRLASPAYLLEVEVIAVLPPRA*
Ga0066388_1079225232	3300005332	Tropical Forest Soil	LLGSVGVGFEHVIKMTAYHTNLDANAAIYREVRGSYVPNTLLQILRLANPAYQLEVEIIAILPPKA*
Ga0070673_1006177591	3300005364	Switchgrass Rhizosphere	QQDADAYREVRASFLPNKSALPASTLLQVVRLADPSYLIEVDAIAILPPAT*
Ga0070713_1006572423	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AEFREVRNSYFPNKAGLPPSTVLQISRLANPNYLVEVDVIAAVPRL*
Ga0066689_105577241	3300005447	Soil	EANGAEFREVRGSYFPNKAALPASTLLQISRLANAAYLVEVEVIAVIPRL*
Ga0066708_105431352	3300005576	Soil	RASYFPNKAALPASTLLQISRLANPAYLLEVEAIAILPPKT*
Ga0070761_109285432	3300005591	Soil	VRASFFANKATLPASTLLQITRLANPSYLIEVEAMAVLPPKA*
Ga0068861_1017071322	3300005719	Switchgrass Rhizosphere	NKAALPASTLLQVSRLANPAYLVEIDVVAVLPPKA*
Ga0066903_1038464641	3300005764	Tropical Forest Soil	NKSALPASTLLQITRLANPSYLIEVDATAILPPRA*
Ga0066903_1077825562	3300005764	Tropical Forest Soil	SNKSALPASTLLQITRLANPSYLIEVDATAILPPRA*
Ga0066652_1006956451	3300006046	Soil	VRASYFPNKAALPASTLLQVSRLANPAYLLEIDVIAVLPPKA*
Ga0097621_1017483922	3300006237	Miscanthus Rhizosphere	NKSALPASTLLQVVRLADPAYRIEVDAVAILPPTA*
Ga0066660_104071721	3300006800	Soil	TDIEQNADIYREVRASTFANKSTLPASTLVQVTRLADPSYLVEVDAIAILPPRA*
Ga0075420_1015271362	3300006853	Populus Rhizosphere	REVRGSYFPNQAALPASTLLQISRLANPTYLVEVEVIAVIPPL*
Ga0073928_107409701	3300006893	Iron-Sulfur Acid Spring	NKGALPASTLLQVTRLANPSYFIEVDATAILPPSA*
Ga0075424_1028819052	3300006904	Populus Rhizosphere	RASYFPNRSALPASTLLQVPRLANAAYLLEVEVIAVLPPRAS*
Ga0074063_129380493	3300006953	Soil	LDEHGAVYREVRASYFPNKAALPASTLLQISRLANPAYLLEVEVIAILPPRT*
Ga0075435_1018096711	3300007076	Populus Rhizosphere	NRSALPASTLLQVPRLANTAYLLEVEVIAVLPPRA*
Ga0099827_100159291	3300009090	Vadose Zone Soil	KAALPASTLVQVPRLANPAFLLEIEAIAILPPKG*
Ga0099827_118574002	3300009090	Vadose Zone Soil	EVRASYFPNRSALPASTLLQVPRLANPAYLLEVEVIAVLPPRA*
Ga0075418_101402061	3300009100	Populus Rhizosphere	SYLVDLERDGVVFREVRASYFPNKAALPASTLLQVSRLANPAYLVEIDVIAVLPPKG*
Ga0075418_123327961	3300009100	Populus Rhizosphere	QNADVYREVRASFLSNKSALPASTLVQVTRLADPSYLIEVDAIAILPPRA*
Ga0099792_102422192	3300009143	Vadose Zone Soil	LARSIEANADVFREVRASYFPNKAALPASTLLQISRLANSAYLLEVDAIAILPPRA*
Ga0099792_104205641	3300009143	Vadose Zone Soil	MTAYHTNLDANAVIYREVRGCSFPNKAALPGHTLLQISRLANPAYQLEVEIIAILPPKA*
Ga0105249_121900691	3300009553	Switchgrass Rhizosphere	EFRDVRALYFKKGTLPTATLLQVVRLANPAYLLEVEAIAVLPPKG*
Ga0126307_104404361	3300009789	Serpentine Soil	REVRALYFPNKSALPAATLVQVPRLANTAYLLEVEAIAVLPPKA*
Ga0126374_112481411	3300009792	Tropical Forest Soil	EVRGSYFPNKAALPGHTLLQISRLANPAYQLEVEIIAILPPRA*
Ga0126374_114918571	3300009792	Tropical Forest Soil	YHTNLDANAAIYREVRGSYFPNKAALPGHTLLQISRLANPAYQLEVEIIAILPPKA*
Ga0126313_108203451	3300009840	Serpentine Soil	FREVRALYFTNKSALPAATLVQVPRLANAAYLLEVEAIAVLPPKA*
Ga0126304_112039211	3300010037	Serpentine Soil	TNLEADGAVFREIRASYFPNKAALPASTLLQVPRLANPAYLVEIDVIAVLPPKA*
Ga0126312_101881911	3300010041	Serpentine Soil	EFREVRALYFTNKSALPAATLVQVPRLANAAYLLEVEAIAVLPPKA*
Ga0126380_118521192	3300010043	Tropical Forest Soil	MPKVRQRRHLFREVRGSSFPNKAALPGHTLLQISRLANPAYQLEVEIIAILPPRA*
Ga0126384_109023101	3300010046	Tropical Forest Soil	LDANAAIYREVRGSYFPNKAALPGHTLLQISRLANPAYQLEVEIIAILPSKA*
Ga0126384_115491242	3300010046	Tropical Forest Soil	VRASYFPNRSALPASTLLQVPRLANSAYLLEVEVIAVLPPRA*
Ga0126370_107278061	3300010358	Tropical Forest Soil	VRGSDFPNKAALPGHTLLQISRLANPAYQLEVEIVAVLPPKA*
Ga0126370_116149881	3300010358	Tropical Forest Soil	QNAEVYREVRASFFSNKSTLPASTLLQITRLANPSYLIEVDATAILPPRT*
Ga0126370_123792312	3300010358	Tropical Forest Soil	FPNKSALPASTLLQVPRLANSAYLLEVEVIAVLPPRA*
Ga0126376_102207901	3300010359	Tropical Forest Soil	VRGSDFPNKAALPGHTLLQISRLANPAYQLEVEIIAILPPKA*
Ga0126376_126934691	3300010359	Tropical Forest Soil	KSALPASTLLQVPRLANWAYLLEVEVIAVLPPRA*
Ga0126376_128550082	3300010359	Tropical Forest Soil	TYLTDIQQDADAYREVRASFLPNKSALPASTLLQVTRLADPSYLIEVDAIAILPPIA*
Ga0126372_118764332	3300010360	Tropical Forest Soil	VRGSDFPNKAALPGHTLLQISRLANPAYQLEVEIIAILPAKA*
Ga0126378_110542071	3300010361	Tropical Forest Soil	SYFSNKAALPASTLLQVSRLANPEYLLEVEALAILPPKA*
Ga0126378_119594492	3300010361	Tropical Forest Soil	FPNKSALPASTLVQVARLSNPAFLLEVEAVAVLPSKA*
Ga0126377_117715081	3300010362	Tropical Forest Soil	LDANAAIYREVRGSYFPNKAALPGHTLLQISRLANPAYQLEVEIIAILPPKA*
Ga0126377_135365373	3300010362	Tropical Forest Soil	ANAAIYREVRGSYFPNKAALPGHTLLQISRLANPAYQLEVEIIAILPAKA*
Ga0126379_130257061	3300010366	Tropical Forest Soil	NIEANADEYRQVRASYFPNKSRLPASTLLQVPRLAQPGYMLEVEVVAVLPPKQA*
Ga0126379_136720821	3300010366	Tropical Forest Soil	NLDANAAIYREVRGSYFPNKAALPGHTLLQISRLANPAYQLEVEIIAILPPKA*
Ga0126381_1042227662	3300010376	Tropical Forest Soil	EQNADVYREVRTSFFANKNALPASTLLQVTRLANPSYLIEVEATAILPPRA*
Ga0126383_117443161	3300010398	Tropical Forest Soil	TDIQQDADVYREVRASFLPNKSALPASTQLQVVRLADPSYLIEVDVIAILPPK*
Ga0126383_136573401	3300010398	Tropical Forest Soil	TNIEANADEYRQVRASYFPNKSRLPASTLLQVPRLAQPGYMLEVEVVAVLPPKQA*
Ga0134127_120771712	3300010399	Terrestrial Soil	YREVRASFLTNKSALPASTLVQVTRLADPSYLIEVEVMAILPPRA*
Ga0134122_128234282	3300010400	Terrestrial Soil	LDRDGATFREVRGSYFPNKAALPASTLLQVSRLANPAYLVEIDVVAVLPPKA*
Ga0137392_104095573	3300011269	Vadose Zone Soil	GSYFPNKAALPASTLVQVPRLANPAFLLEIEAIAILPPKA*
Ga0126317_108657131	3300011332	Soil	TNLDANAAIYREVRSSYFPNKAALPGHTLLQISRLANPAYQLEVEIIAILPPKA*
Ga0137436_10596331	3300011423	Soil	LTNLEADGAVFREVRGSYFPNKAALPASTLLQVPRLANPAYLVEVEVIAVLPPKA*
Ga0137381_110687872	3300012207	Vadose Zone Soil	FREVRASYFPNRSALPASTLLQVPRLANPAYLLEVEVIAVLPPRA*
Ga0150985_1143735622	3300012212	Avena Fatua Rhizosphere	MTAYHTNLDANAAIYREVRSSYFPNKAALPGHTLLQISRLANPAYQLEVEVIAILPARA*
Ga0137370_109004682	3300012285	Vadose Zone Soil	YLINIEANAPEFREVRGSYFPNKSALPASTLVQVPRLANPAFLLEVEAIAVLPPKA*
Ga0137385_103398291	3300012359	Vadose Zone Soil	YFTNKAALPAATLMQVVRLANPAYLLEVEAIAILPPKT*
Ga0137375_102205861	3300012360	Vadose Zone Soil	RGSYFPNKAALPGHTLLQISRLANPAYQLEVEIIAILPPKA*
Ga0157301_102834331	3300012911	Soil	LERDGGGFREVRGSYFLNKAALPASTLLQVSRLANPAYLVEIDVVAVLPPKA*
Ga0137413_103668142	3300012924	Vadose Zone Soil	VNAAEFREVRASYFPNRSALPASTLLQVPRLANPAYLLEVEVIAVLPPRA*
Ga0137416_114710381	3300012927	Vadose Zone Soil	RASFFANKATLPASTLLQITRLANPSYLIEVEAMAVLPPKA*
Ga0137404_111904281	3300012929	Vadose Zone Soil	SYFPNKTALPASTLLQISRLANPTYLVEVEVIAVIPRL*
Ga0126375_116601771	3300012948	Tropical Forest Soil	AATYREVRMSYFPNKAALPGHTLLQISRLANPAYQLEVEIIAILPAKA*
Ga0164298_111420861	3300012955	Soil	NAAEFRDVRALYFKKGTLPTATLLQVSRLANPAYLLEVEAIAVLPPKG*
Ga0164301_100102376	3300012960	Soil	VRGSYFQNKQSLPASTLVQVPRLANPAFLLEIEAIAILPPKA*
Ga0164302_103626213	3300012961	Soil	VRGSYFPNKQSLPASTLVQVPRLANPAFLLEIEAIAILPPKA*
Ga0126369_106787754	3300012971	Tropical Forest Soil	NLEANGAEFREVRGSYFPNEAALPASTLLQISRLANAAYLVEVEVIAVIPRL*
Ga0126369_128045931	3300012971	Tropical Forest Soil	NKSALPPSTLVQVARLSNPAFLLEVEAVAVLPSKA*
Ga0164308_109961501	3300012985	Soil	SYFSDKTGLPASTLLEVSRLANPAYLIEVEAIAVLPPA*
Ga0134079_106769951	3300014166	Grasslands Soil	VRASYFPNKAALPASTLLQVSRLANPAYLVEIDVIAVLPPK*
Ga0182024_103201472	3300014501	Permafrost	VRALFFANRATLPASTLLQITRLANPSYLIEVEAMAVLPPKA*
Ga0157376_111322341	3300014969	Miscanthus Rhizosphere	ADMYREVRASFLANKSALPASTLVQVTRLADPAYLIEVDATAILPPGA*
Ga0137420_13919019	3300015054	Vadose Zone Soil	VRASYFPNKAVLPASTLLQVPRLANAAYLLEVEVVAILPLRA*
Ga0132258_111791861	3300015371	Arabidopsis Rhizosphere	SYFPNKAALPASTLLQISRLANPSYLVEVEVIAMIPRL*
Ga0132258_117506161	3300015371	Arabidopsis Rhizosphere	LDEHGAVYREVRASYFPNKAALPASTLLQISRLANPAYLLEVEVIAILPPKT*
Ga0132256_1006783111	3300015372	Arabidopsis Rhizosphere	EHGTVYREVRASYFPNKAALPASTLLQVVRLADPAYRIEVDAVAILPPK*
Ga0132255_1051534831	3300015374	Arabidopsis Rhizosphere	TDIQQDADAYREVRASFLPNKSALPASTLLQVVRLADPSYLIEVDAIAILPPAT*
Ga0182041_107779662	3300016294	Soil	VRGSYFPNKAALPASTLLQISRLANPACLVEVEVIAAIPRL
Ga0182032_113203681	3300016357	Soil	DVYREVRASFFANKSALPASTLLQITRLANPSFLIEVDATAVLPPRA
Ga0182034_116082971	3300016371	Soil	VRGSYFPNKAALPASTLLQMSRLANAAYLVEVEVI
Ga0182040_115725791	3300016387	Soil	NGAEFREVRGSYFPNKNALPASTLLQISRLANPAYLVEVEAIAILPPKA
Ga0187781_102613352	3300017972	Tropical Peatland	FFPNKSALPASTLLQITRLANPSYLIEVDATAILPPRA
Ga0184610_12611302	3300017997	Groundwater Sediment	EVRASYFPNRSALPASTLLQVPRLANPAYLLEVEVIAVLPLRA
Ga0184609_103152931	3300018076	Groundwater Sediment	NAAEYRTVRASYFTNRSALPASTLLQIPRLANAAYLLEVEVVAVLPPKA
Ga0184625_100840481	3300018081	Groundwater Sediment	TNRSALPASTLLQIPRLANAAYLLEVEVVAVLPPKA
Ga0190268_119506542	3300018466	Soil	AAYRDVRAMYFKNKAALPGHTLLQISRLANPAYQIELEFIAILPPKA
Ga0210395_111314541	3300020582	Soil	IYREVRASFFTNKNALPASTLLQITRLASPSFLIEVEATAILPPRA
Ga0210406_113267491	3300021168	Soil	HGPAYREVRASYFSNKAALPASTLLQVSRLANPMFLLEVEALAILPPRA
Ga0210400_102103732	3300021170	Soil	PNKAALPASTLLQISRLANPAYLVEVEVIAILPPKA
Ga0210405_100568634	3300021171	Soil	ANAAAYREVRASYFPNKAALPASTLLQISRLANSAYLLEVEAVAILPPKA
Ga0210396_103137513	3300021180	Soil	TNKSALPASTLLQITRLANPSFLIEVDATAILPPRT
Ga0210397_105365932	3300021403	Soil	NKSALPASTLLQITRLANPSFLIEVDATAILPPRT
Ga0212123_106149391	3300022557	Iron-Sulfur Acid Spring	NKGALPASTLLQVTRLANPSYFIEVDATAILPPSA
Ga0207687_111212063	3300025927	Miscanthus Rhizosphere	SYFANKAALPASTLLQVPRLANAAYLLEVEVVAVLPPRA
Ga0207700_102766003	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	EFRETRNSYFPNKAGLPPSTVLQISRLANPNYLVEVDVIAAVPRL
Ga0207700_113615202	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	YFPNKQALPAATLLQVPRLANPAFLLEVEAIAILPPKA
Ga0207665_110304062	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VRASYFPNRSALPASTLLQVPRLANTAYLLEVEVMAILPPKA
Ga0207651_110465102	3300025960	Switchgrass Rhizosphere	TDIQQDADAYREVRASFLPNKSALPASTLLQVVRLADPSYLIEVDAIAILPPAT
Ga0207703_114261672	3300026035	Switchgrass Rhizosphere	RASFLPNKSALPASTLLQVVRLADPAYRIEVDAVAILPPK
Ga0207641_124610621	3300026088	Switchgrass Rhizosphere	GSYFPNKQGLPASTLVQVPRLANPAFLLEIEAVAILPPKA
Ga0209799_10242301	3300027654	Tropical Forest Soil	YFPNKAALPGHTLLQISRLANPAYQLEVEIIAILSPKA
Ga0209799_10242303	3300027654	Tropical Forest Soil	VIRSKCRKSGNAAIYREVRGSYFPNKAALPGHTLLQISRLANPAYQLEVEIIA
Ga0209040_101151721	3300027824	Bog Forest Soil	NLEANGAEFREVRGSYFPNKTALPASTLLQISRLANPAYLVEVEVIAILPPKA
Ga0209701_105305192	3300027862	Vadose Zone Soil	APEFREVHGSYFPNKSALPASTLVQVPRLSNPAFLLEVEAVAVLPPKA
Ga0209488_100077998	3300027903	Vadose Zone Soil	LARSIEANADVFREVRASYFPNKAALPASTLLQISRLANSAYLLEVDAIAILPPRA
Ga0307307_101804311	3300028718	Soil	VRGSYFLNKQALPASTLVQVPRLANLAFLLEIEAIAILPPKA
Ga0307296_103077893	3300028819	Soil	REVRASYFANKAALPASTLLQVSRLANPAYLVEIDVIAVLPPKA
Ga0307300_101939262	3300028880	Soil	NGAEFREVRGSYFLNKQALPASTLVQVPRLANLAFLLEIEAIAILPPKA
Ga0311356_120225191	3300030617	Palsa	PAYREIRASYFSNKVALPASTLLQVSRLADPQYLIEVEATAILPPKS
Ga0310888_107566701	3300031538	Soil	ATFREVRGSYFPNKAALPASTLLQVSRLANPAYLVEIDVVAVLPPKA
Ga0302321_1014308761	3300031726	Fen	EVRASYFPNKATLPASTLLQVPRLANADYLLEVEVVAILPPRA
Ga0307405_113907651	3300031731	Rhizosphere	NKSALPASTLVQVTRLADPSYLIEVDAIAILPASA
Ga0307468_1015756312	3300031740	Hardwood Forest Soil	REVRASFLANKNALPASTLVQVTRLADPSYLIEVDATAILPPRA
Ga0306918_108021091	3300031744	Soil	VRGSYFPNKAALPASTLLQMSRLANAAYLVEVEVIAVIPRL
Ga0306918_113406681	3300031744	Soil	REVRGSYFPNKDALPASTLLQISRLANPAYLVEVEAIAILPPKA
Ga0318521_102764151	3300031770	Soil	FSNKSALPASTLLQVSRLANPDYLLEVEALAILPPKA
Ga0318546_107217262	3300031771	Soil	VRASYFPNKAALPASTLLQISRLANPAYLVEVEAIAILPPKA
Ga0318508_12475012	3300031780	Soil	REVRGSYFPNKAALPASTLLQMSRLANAAYLVEVEVIAVIPRL
Ga0310917_110954722	3300031833	Soil	YFPNKAALPASTLLQISRLANPACLVEVEVIAAIPRL
Ga0306919_113203561	3300031879	Soil	QNADAYREVRASFFANKSALPASTLLQITRLANPSFLIEVDATAVLPPRA
Ga0306925_113614731	3300031890	Soil	FANKSALPASTLLQITRLANPSFLIEVDATAILPPRA
Ga0306923_102915473	3300031910	Soil	PNKAALPASTLLQISRLANPAYLVEVEAIAILPPKA
Ga0306921_113235281	3300031912	Soil	IEQNAEAYREVRASFFANKGALPASTLLQITRLADPSYLIEVDATAILPPLA
Ga0306926_115134752	3300031954	Soil	TNKSTLPAATLVQVARLANPNFLLEVEVIAVLPPKV
Ga0310897_100304921	3300032003	Soil	ITSNPTAIAANATDFRDVRALYFKTGTLPTATQLQVSRLANPAYLLEVEAIAVLPPKG
Ga0310902_103806533	3300032012	Soil	NKAALPASTLLQVSRLANPAYLVEIDVVAVLPPKA
Ga0310906_108240192	3300032013	Soil	NKQALPASTLVQVPRLANPAFLLEIEAIAILPPKA
Ga0318558_104961922	3300032044	Soil	DCAAYREIRASYFSNKAALPASTLLQVSRLANPEYLLEVEALAILPPKA
Ga0318505_104758861	3300032060	Soil	EFREVRGSYFPNKAALPASTLLQVPRLANPAFLLEVEAIAVLPPKA
Ga0318504_101180471	3300032063	Soil	YLINIEANAPEFREVRGSFFPNKAALPASWLLQVPRLANPAFLLEVEAIAVLPPKA
Ga0318553_103857651	3300032068	Soil	ASYFSNKAALPASTLLQVSRLANPEYLLEVEALAILPPKA
Ga0307471_1027154872	3300032180	Hardwood Forest Soil	MAVIAEPFSANADVFREVRASYFPNKAALPASSLLQISRLANSSYLLEVEAIAILAPGA
Ga0307471_1036136691	3300032180	Hardwood Forest Soil	TFREVRGSYFPNKAALPASTLLQVSRLANPAYLVEIDVVAVLPPKA
Ga0306920_1008196061	3300032261	Soil	YREVRTSFFTNKSALPASTLLQIARLANPSYLIEVEATAILPPRA
Ga0306920_1019277282	3300032261	Soil	LVTYLTDIEQNAEAYREVRASFFANKGALPASTLLQITRLADPSYLIEVDATAILPPLA
Ga0335080_113339872	3300032828	Soil	REVRASFFANKGALPASTLLQITRLADPSYLIEVDATAILPPLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051217

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences