NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F051174

Metagenome / Metatranscriptome Family F051174

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F051174
Family Type Metagenome / Metatranscriptome
Number of Sequences 144
Average Sequence Length 41 residues
Representative Sequence VEIVIVLTILILAGVLSVVGPDTHDYDVNDRRGWWPGRR
Number of Associated Samples 113
Number of Associated Scaffolds 144

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 54.86 %
% of genes near scaffold ends (potentially truncated) 20.83 %
% of genes from short scaffolds (< 2000 bps) 86.81 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (65.972 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(11.806 % of family members)
Environment Ontology (ENVO) Unclassified
(36.111 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.833 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 26.87%    β-sheet: 0.00%    Coil/Unstructured: 73.13%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 144 Family Scaffolds
PF00892EamA 47.92
PF03466LysR_substrate 24.31
PF00126HTH_1 16.67
PF01783Ribosomal_L32p 2.08
PF02504FA_synthesis 1.39
PF05656DUF805 1.39
PF00550PP-binding 0.69
PF12850Metallophos_2 0.69
PF01336tRNA_anti-codon 0.69
PF02463SMC_N 0.69
PF02978SRP_SPB 0.69
PF13882Bravo_FIGEY 0.69
PF01467CTP_transf_like 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 144 Family Scaffolds
COG0333Ribosomal protein L32Translation, ribosomal structure and biogenesis [J] 2.08
COG0416Acyl-ACP:phosphate acyltransferase (fatty acid/phospholipid biosynthesis)Lipid transport and metabolism [I] 1.39
COG3152Uncharacterized membrane protein YhaH, DUF805 familyFunction unknown [S] 1.39
COG0541Signal recognition particle GTPaseIntracellular trafficking, secretion, and vesicular transport [U] 0.69

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms65.97 %
UnclassifiedrootN/A34.03 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_102042402All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1217Open in IMG/M
3300000956|JGI10216J12902_105164008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2153Open in IMG/M
3300000956|JGI10216J12902_105780533Not Available754Open in IMG/M
3300000956|JGI10216J12902_108802267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1248Open in IMG/M
3300000956|JGI10216J12902_114305722Not Available1112Open in IMG/M
3300001538|A10PFW1_10051411Not Available1220Open in IMG/M
3300003990|Ga0055455_10231478Not Available583Open in IMG/M
3300004114|Ga0062593_100553054All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300004114|Ga0062593_102525184All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales582Open in IMG/M
3300004156|Ga0062589_101440038All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300004157|Ga0062590_100412509All Organisms → cellular organisms → Bacteria1112Open in IMG/M
3300004463|Ga0063356_100263968Not Available2099Open in IMG/M
3300004479|Ga0062595_102461943All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300004480|Ga0062592_100856714All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300004643|Ga0062591_101750510All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300005093|Ga0062594_100519930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1014Open in IMG/M
3300005093|Ga0062594_103237973All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300005329|Ga0070683_100013769All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7061Open in IMG/M
3300005329|Ga0070683_100567096All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300005332|Ga0066388_100219170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2532Open in IMG/M
3300005332|Ga0066388_103363913All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300005332|Ga0066388_107938190Not Available531Open in IMG/M
3300005353|Ga0070669_100938993Not Available740Open in IMG/M
3300005365|Ga0070688_101715330All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005441|Ga0070700_101907646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium514Open in IMG/M
3300005445|Ga0070708_100819000Not Available875Open in IMG/M
3300005459|Ga0068867_101073449Not Available734Open in IMG/M
3300005529|Ga0070741_10007956All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria21565Open in IMG/M
3300005529|Ga0070741_10016894All Organisms → cellular organisms → Bacteria12078Open in IMG/M
3300005529|Ga0070741_10041004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5972Open in IMG/M
3300005529|Ga0070741_10052259All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4931Open in IMG/M
3300005529|Ga0070741_10063531All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia4260Open in IMG/M
3300005535|Ga0070684_100449449All Organisms → cellular organisms → Bacteria1191Open in IMG/M
3300005564|Ga0070664_100653855Not Available977Open in IMG/M
3300005718|Ga0068866_11434641All Organisms → cellular organisms → Bacteria → Terrabacteria group505Open in IMG/M
3300005764|Ga0066903_100138350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3453Open in IMG/M
3300005764|Ga0066903_100937590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1573Open in IMG/M
3300005764|Ga0066903_101857162All Organisms → cellular organisms → Bacteria1153Open in IMG/M
3300005764|Ga0066903_103662986All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales827Open in IMG/M
3300005841|Ga0068863_102755266All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300005874|Ga0075288_1034631All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria752Open in IMG/M
3300005884|Ga0075291_1004374All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1515Open in IMG/M
3300005937|Ga0081455_10064721All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3060Open in IMG/M
3300006038|Ga0075365_11058691All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300006046|Ga0066652_101194375All Organisms → cellular organisms → Bacteria → Terrabacteria group720Open in IMG/M
3300006358|Ga0068871_100352177All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1303Open in IMG/M
3300006603|Ga0074064_11741883Not Available787Open in IMG/M
3300006755|Ga0079222_10251933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1111Open in IMG/M
3300006854|Ga0075425_100364514All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1664Open in IMG/M
3300006854|Ga0075425_101427452Not Available783Open in IMG/M
3300006904|Ga0075424_100622273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1153Open in IMG/M
3300007076|Ga0075435_100562911Not Available988Open in IMG/M
3300009012|Ga0066710_102413711All Organisms → cellular organisms → Bacteria762Open in IMG/M
3300009088|Ga0099830_11714115Not Available524Open in IMG/M
3300009090|Ga0099827_10594392All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria954Open in IMG/M
3300009098|Ga0105245_10148254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2216Open in IMG/M
3300009098|Ga0105245_10160262All Organisms → cellular organisms → Bacteria2134Open in IMG/M
3300009137|Ga0066709_100085679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3784Open in IMG/M
3300009148|Ga0105243_10196433All Organisms → cellular organisms → Bacteria1766Open in IMG/M
3300009148|Ga0105243_10415888Not Available1253Open in IMG/M
3300009176|Ga0105242_11125188Not Available800Open in IMG/M
3300009177|Ga0105248_11243330All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300010373|Ga0134128_11726975Not Available689Open in IMG/M
3300010400|Ga0134122_11450924All Organisms → cellular organisms → Bacteria → Terrabacteria group703Open in IMG/M
3300011119|Ga0105246_11473113Not Available638Open in IMG/M
3300012008|Ga0120174_1128123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium609Open in IMG/M
3300012010|Ga0120118_1175609All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300012204|Ga0137374_10353101All Organisms → cellular organisms → Bacteria1185Open in IMG/M
3300012204|Ga0137374_10353839Not Available1183Open in IMG/M
3300012204|Ga0137374_11272929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria509Open in IMG/M
3300012211|Ga0137377_11649906All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300012350|Ga0137372_10980843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria591Open in IMG/M
3300012354|Ga0137366_10819645Not Available660Open in IMG/M
3300012356|Ga0137371_10877994Not Available682Open in IMG/M
3300012532|Ga0137373_10500883Not Available928Open in IMG/M
3300012911|Ga0157301_10198229Not Available674Open in IMG/M
3300012913|Ga0157298_10084869Not Available822Open in IMG/M
3300012957|Ga0164303_10121371All Organisms → cellular organisms → Bacteria1334Open in IMG/M
3300012958|Ga0164299_10082997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1614Open in IMG/M
3300012961|Ga0164302_10053186All Organisms → cellular organisms → Bacteria2023Open in IMG/M
3300012971|Ga0126369_13548574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium511Open in IMG/M
3300012977|Ga0134087_10215831Not Available865Open in IMG/M
3300012984|Ga0164309_10149449All Organisms → cellular organisms → Bacteria1551Open in IMG/M
3300012985|Ga0164308_11820881Not Available567Open in IMG/M
3300012988|Ga0164306_10932933Not Available710Open in IMG/M
3300012989|Ga0164305_10231966All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1321Open in IMG/M
3300013307|Ga0157372_11857130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria693Open in IMG/M
3300013501|Ga0120154_1125557Not Available583Open in IMG/M
3300013770|Ga0120123_1141668All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300014314|Ga0075316_1198478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces528Open in IMG/M
3300014326|Ga0157380_12847907All Organisms → cellular organisms → Bacteria → Terrabacteria group550Open in IMG/M
3300015371|Ga0132258_10038721All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria10782Open in IMG/M
3300015371|Ga0132258_10059456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8794Open in IMG/M
3300015371|Ga0132258_10370788All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3547Open in IMG/M
3300015371|Ga0132258_12552256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1277Open in IMG/M
3300015371|Ga0132258_13478289All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300015373|Ga0132257_100799963Not Available1177Open in IMG/M
3300015373|Ga0132257_102905306Not Available624Open in IMG/M
3300015374|Ga0132255_103649103Not Available654Open in IMG/M
3300017792|Ga0163161_10994865All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria716Open in IMG/M
3300017944|Ga0187786_10237825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria714Open in IMG/M
3300017947|Ga0187785_10439355All Organisms → cellular organisms → Bacteria → Terrabacteria group637Open in IMG/M
3300018029|Ga0187787_10239210All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300018032|Ga0187788_10328353All Organisms → cellular organisms → Bacteria → Terrabacteria group627Open in IMG/M
3300018433|Ga0066667_11441246Not Available606Open in IMG/M
3300019356|Ga0173481_10420089All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria660Open in IMG/M
3300019361|Ga0173482_10395656All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300020002|Ga0193730_1030433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1565Open in IMG/M
3300024254|Ga0247661_1040557All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300024254|Ga0247661_1057486Not Available716Open in IMG/M
3300024283|Ga0247670_1102169Not Available530Open in IMG/M
3300025167|Ga0209642_10195720Not Available1165Open in IMG/M
3300025322|Ga0209641_10749102Not Available662Open in IMG/M
3300025907|Ga0207645_10992711Not Available569Open in IMG/M
3300025914|Ga0207671_11133752All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300025919|Ga0207657_10323037Not Available1220Open in IMG/M
3300025926|Ga0207659_11250746Not Available638Open in IMG/M
3300025926|Ga0207659_11645103All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300025927|Ga0207687_10426105All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1096Open in IMG/M
3300025932|Ga0207690_11542197Not Available555Open in IMG/M
3300025935|Ga0207709_10120663All Organisms → cellular organisms → Bacteria1769Open in IMG/M
3300025935|Ga0207709_11023674All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300025941|Ga0207711_10953526Not Available797Open in IMG/M
3300025944|Ga0207661_11443379Not Available631Open in IMG/M
3300025960|Ga0207651_11580150All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300026035|Ga0207703_10657456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria995Open in IMG/M
3300026035|Ga0207703_11923726All Organisms → cellular organisms → Bacteria → Terrabacteria group568Open in IMG/M
3300026142|Ga0207698_10399735Not Available1313Open in IMG/M
3300027787|Ga0209074_10564353Not Available503Open in IMG/M
3300027821|Ga0209811_10037010All Organisms → cellular organisms → Bacteria1638Open in IMG/M
3300027915|Ga0209069_10894770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria537Open in IMG/M
3300028592|Ga0247822_10695016All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300028828|Ga0307312_10231650Not Available1192Open in IMG/M
3300028880|Ga0307300_10091971Not Available907Open in IMG/M
3300028884|Ga0307308_10109646All Organisms → cellular organisms → Bacteria1316Open in IMG/M
3300028885|Ga0307304_10028586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1946Open in IMG/M
3300031226|Ga0307497_10143655All Organisms → cellular organisms → Bacteria → Terrabacteria group983Open in IMG/M
3300031547|Ga0310887_11112166All Organisms → cellular organisms → Bacteria → Terrabacteria group507Open in IMG/M
3300032075|Ga0310890_10753787Not Available767Open in IMG/M
3300032205|Ga0307472_102767012All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300032256|Ga0315271_11865870Not Available515Open in IMG/M
3300032782|Ga0335082_10974350Not Available712Open in IMG/M
3300033550|Ga0247829_10075036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2471Open in IMG/M
3300033550|Ga0247829_10292973All Organisms → cellular organisms → Bacteria1320Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.81%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil6.25%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere6.25%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere5.56%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.86%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.17%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost3.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.47%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.78%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.78%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.78%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.08%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.08%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.08%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.08%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.39%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.39%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.39%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.39%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.39%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.39%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.39%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.39%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.69%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.69%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.69%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.69%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.69%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.69%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.69%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.69%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.69%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.69%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.69%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.69%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.69%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.69%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.69%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.69%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.69%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.69%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300003990Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005874Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404EnvironmentalOpen in IMG/M
3300005884Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006603Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012008Permafrost microbial communities from Nunavut, Canada - A39_80cm_12MEnvironmentalOpen in IMG/M
3300012010Permafrost microbial communities from Nunavut, Canada - A7_35cm_12MEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013501Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25MEnvironmentalOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300014314Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300024254Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02EnvironmentalOpen in IMG/M
3300024283Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11EnvironmentalOpen in IMG/M
3300025167Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025322Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10204240223300000956SoilMEMIVVLTVLLLAGVLSVVARDSRDYDDRDRRGWWPGRR*
JGI10216J12902_10516400823300000956SoilMLVILTLLLLAGVVSVMGRDTRDYDYTDRRRWWPGRR*
JGI10216J12902_10578053313300000956SoilMPGRQAWGMAFAIVFAVLILACVLSILGPDGRDYDVNDRRGWWP
JGI10216J12902_10880226723300000956SoilMAMLVVLTILILAGVLSVVARDVHDLDDRDRRGWWPGRR*
JGI10216J12902_11430572223300000956SoilMLVVLTILILAGVLSVVAGDSRDLDDRDRRGWWPGRK*
A10PFW1_1005141133300001538PermafrostVEIIIVLTIVLLAGVVSVMGPDSHDYDDTDQRGWWPGRPR*
Ga0055455_1023147823300003990Natural And Restored WetlandsMEMIVLLALLLLAGLFSVLGPDARDYDDTDRRGWWPGRR*
Ga0062593_10055305423300004114SoilMEMLVVLTIVILAGVLSVVARDSHDYDDSDRRGWWPGHR*
Ga0062593_10252518423300004114SoilVVVEIVIVLTILILAGVVSALGPDSRDYDVNDRRGWWPGRR*
Ga0062589_10144003823300004156SoilMGQMTDNVLMTAIILFSLLLLAGVFSVMGPDTRDYDVNDRRGWWPGKR*
Ga0062590_10041250923300004157SoilMEIVVILALLLLAGVVSVLGPDAHDLDVNDRRGWWPGRR*
Ga0063356_10026396823300004463Arabidopsis Thaliana RhizosphereMAFAVVFAILILVGVLSIVVPERRDYDVNDRRGWWPGHSR*
Ga0062595_10246194313300004479SoilSSQIIRFVVMGQMTDNVLMTAIILFSLLLLAGVFSVMGPDTRDYDVNDRRGWWPGKR*
Ga0062592_10085671423300004480SoilMEMIVVLTVLLLAGVLSVVARDSRDYDDHDRRGWWPGRR*
Ga0062591_10175051023300004643SoilMRQFDDAMSMTALIVLSFVILAGVLSVMGPDSRDYDVNDRRGWWPGRR*
Ga0062594_10051993013300005093SoilVVMTQIDDALCVEALILFCFVILAGVFSVMGPDSRDYRVNDRRGWWPGRR*
Ga0062594_10323797323300005093SoilMSMTALIILSFVILAGVLSVMGPDSRDYDVNDRRGWWPGRR*
Ga0070683_100013769103300005329Corn RhizosphereVEIVIVLTILILAGVLSVVGPDTHDYDVNDRRGWWPGSR*
Ga0070683_10056709623300005329Corn RhizosphereMTQIDDALCVEALILFCFVILAGVFSVMGPDSRDYRVNDRRGWWPGRR*
Ga0066388_10021917023300005332Tropical Forest SoilMEIVILLTILILAGVVSVLGPDSRDYDVNDRRGWWPGSR*
Ga0066388_10336391323300005332Tropical Forest SoilMAFVVVFAIVILVCVLSVLGPDRRDYDVNDRRGWWPGHRS*
Ga0066388_10793819023300005332Tropical Forest SoilMAFVVVFAILILACVLSVLGPDSRDYDVNDRRGWWPGHSR*
Ga0070669_10093899313300005353Switchgrass RhizosphereNRQASVVEIVIVLTILILAGVLSVVGPDTHDYDVNDRRGWWPGRR*
Ga0070688_10171533013300005365Switchgrass RhizosphereIGDALCVEALILLCFVILAGVFSVMGPDSRDYRVNDRRAWWPGRR*
Ga0070700_10190764623300005441Corn, Switchgrass And Miscanthus RhizosphereMAFVVVFAILILVCVLSVLGRDGRDYDVNDRRGWWPGHHR*
Ga0070708_10081900023300005445Corn, Switchgrass And Miscanthus RhizosphereMAIAIVLTILILAGVLSVIVPDRRDYDVNDRRGWWPGHRN*
Ga0068867_10107344923300005459Miscanthus RhizosphereVEIVIVLTILILAGVLSVVGPDTHEYDVNDRRGWWPGSR*
Ga0070741_1000795623300005529Surface SoilMSMGLHATPMEIIVVLALLLLAGVASILGPDPRDLDDRDRRGWWPGHSR*
Ga0070741_1001689443300005529Surface SoilMAMLVVLTFLLLAGVLSVVARDSHDLDDHDRRGWWPGRR*
Ga0070741_1004100423300005529Surface SoilVLIIIDGHPMRMAIVLVLTILFLAGVLSVMGPDTRDWDVNDRRGWWPGSR*
Ga0070741_1005225953300005529Surface SoilMEAMVVLMILLLASVLSVVRTDRRDYDDRDRRGWWPGHR*
Ga0070741_1006353173300005529Surface SoilMAMLVVLTFLILAGVLSVVARDSHDFDDHDRRGWWPGRR*
Ga0070684_10044944923300005535Corn RhizosphereMAMLVVLTILILAGVLSVVARDSRDYDDHDRRGWWPGRR*
Ga0070664_10065385523300005564Corn RhizosphereVEIVIVLTILILAGVLSVVGPDTHDYDVNDRRGWWPGRR*
Ga0068866_1143464113300005718Miscanthus RhizosphereIVILTIVLLAGVLSVVVRDSRDYDDHDRRGWWPGRR*
Ga0066903_10013835023300005764Tropical Forest SoilMTFVVVFSILILVGVLSIVVPERRDYDVNDRRGWWPGHSK*
Ga0066903_10093759023300005764Tropical Forest SoilMAPLIVLAILLLACVFSVVGTDSHDYDVNDRRGWWPGHK*
Ga0066903_10185716223300005764Tropical Forest SoilVEIVIVLTILILAGVVSVLGPDSRDYDVNDRRGWWPGSR*
Ga0066903_10366298623300005764Tropical Forest SoilMLVVLVILILAGVLSVASRDTRDYDYRDRRGWWPGRR*
Ga0068863_10275526623300005841Switchgrass RhizosphereVLTILILAGVLSVVARDSRDYDDHDRRGWWPGRR*
Ga0075288_103463123300005874Rice Paddy SoilVEIIVLLTLLLLAGVVSIMGPDSHDYDDRDRRGWWPGHTR*
Ga0075291_100437413300005884Rice Paddy SoilHPEGVEIIVLLTLLLLAGVVSIMGPDSHDYDDRDRRGWWPGHTR*
Ga0081455_1006472133300005937Tabebuia Heterophylla RhizosphereMTFVVVFSILILVGVLSVVVPERRDYDVNDRRGWWPGHSR*
Ga0075365_1105869123300006038Populus EndosphereMEVVILFVILLLAGVASVLGPDSHDYDANDRRGWWPGHR*
Ga0066652_10119437523300006046SoilMEMIVVLTILILAGVLSVVAGDSRDYDDHDRRGWWPGRR*
Ga0068871_10035217733300006358Miscanthus RhizosphereVEIVIVLTILILAGVLSVVGPDTHDYDVNDRRGWWPGS
Ga0074064_1174188313300006603SoilIGQIDDAMSMTAPIILFSLLLLAGVLSVLGPDTRDYDVNDRRGWWPGRR*
Ga0079222_1025193323300006755Agricultural SoilMAMIFVLGFVLLAGVASVISRDTHDFNDTDRRGWWPGRR*
Ga0075425_10036451433300006854Populus RhizosphereMAFAVVFAVLILACVLSVLGPDGRDYDVNDRRGWWPGHRR*
Ga0075425_10142745223300006854Populus RhizosphereAFAVVFAILILACVLSVLGPDGRDYDVNDRRGWWPGHRR*
Ga0075424_10062227323300006904Populus RhizosphereVVVEIVIVLTILILAGVVSALGPDSRDYDVNDRRGWWPGKR*
Ga0075435_10056291123300007076Populus RhizosphereVVVEIVVVLTILILAGVVSALGPDSRDYDVNDRRGWWPGKR*
Ga0066710_10241371123300009012Grasslands SoilVEIIVLLALLLLAGVFSVMGPDQRDYDDTDRRGWWPGRR
Ga0099830_1171411523300009088Vadose Zone SoilVSVEIIVLLTLLLLACVVSVMGPDSHDYDDTDRRGWWPGR
Ga0099827_1059439223300009090Vadose Zone SoilVSVEIIVLLTLLLLAGVVSVMGPDSHDYDDTDRRGWWPGRSR*
Ga0105245_1014825423300009098Miscanthus RhizosphereMSMTALIVLSFVILAGVLSVMGPDSRDYDVNDRRGWWPGRR*
Ga0105245_1016026253300009098Miscanthus RhizosphereMEMIVILTIVLLAGVLSVVVRDSRDYDDHDRRGWWPGRR*
Ga0066709_10008567943300009137Grasslands SoilVEIIVLLALLLLAGVFSVMGPDQRDYDDTDRRGWWPGRR*
Ga0105243_1019643313300009148Miscanthus RhizosphereHPASVEIVIVLTILILAGVLSVVGPDTHDYDVNDRRGWWPGSR*
Ga0105243_1041588823300009148Miscanthus RhizosphereMTQIGDALCVEALILLCFVILAGVFSVMGPDSRDYRVNDRRGWWPGRR*
Ga0105242_1112518823300009176Miscanthus RhizosphereMIVILTVVLLAGVLSVVVRDSRDYDDHDRRGWWPGRR*
Ga0105248_1124333023300009177Switchgrass RhizosphereMSMTALIVLSFVILAGVLSVMGPDSRDYDVNDRRGWWPGKK*
Ga0134128_1172697513300010373Terrestrial SoilMEMIVILTIVLLAGVLSVVVRDSRDYDDRDRRGWWPGRR*
Ga0134122_1145092413300010400Terrestrial SoilMAIVIVLTILILAGVLSVLGPDTHDYDVNDRRGWWPGSR*
Ga0105246_1147311323300011119Miscanthus RhizosphereMEMIVILTVVLLAGVLSVVVRDSRDYDDHDRRGWWPGRR*
Ga0120174_112812323300012008PermafrostSVEIIIVLTIVLLAGVVSVMGPDSHDYDDTDQRGWWPGRPR*
Ga0120118_117560913300012010PermafrostELIIVLTIVLLAGVVSVMGPDSHDYDDTDQRGWWPGRPR*
Ga0137374_1035310123300012204Vadose Zone SoilVFVEIIVLLTLLLLAGVVSVMGPDSHDYDDTDRRGWWPGRSR*
Ga0137374_1035383923300012204Vadose Zone SoilMEIIILLTVLLLAGVVSIMGPESHDYDDTDRRGWWPGRAR*
Ga0137374_1127292923300012204Vadose Zone SoilMEMLVLLTLVLLAGVFSVIGTDSRDFDDTDRRGWWPGHK*
Ga0137377_1164990623300012211Vadose Zone SoilVSVEIILLLTILLLAGVVSVMGPDSHDYDDTDRRGWWPGRSR*
Ga0137372_1098084323300012350Vadose Zone SoilMEMLVVLTFLILAGVLSVLSHDSRDFDDTDRRGWWPGRR*
Ga0137366_1081964523300012354Vadose Zone SoilMEMIVLLTFLLLAGVVSVMGPDSHDYDDTDRRGWWPGRSR*
Ga0137371_1087799423300012356Vadose Zone SoilMEIIILLTILFLAGVVSVMGPDPHDLDDTDRRGWWPGRSR*
Ga0137373_1050088323300012532Vadose Zone SoilMEIIVLLTVLILAGVVSVMGPDTHDYDDHDRRGWWPGRAR*
Ga0157301_1019822913300012911SoilIDDAMSMAAPIIIFSLLILAGVLSVLGPDTRDYDVNDRRGWWPGHK*
Ga0157298_1008486923300012913SoilMTDTVLMTAIILFSLLLLAGVFSVMGPDTRDYDVNDRRGWWPGKR*
Ga0164303_1012137123300012957SoilMIVILTVVLLAGVLSVVVRDSRDYDDRDRRGWWPGRR*
Ga0164299_1008299733300012958SoilVEIVIVLTILILAGVLSVVGPDTRDYDVNDRRGWWPGSR*
Ga0164302_1005318623300012961SoilMPMAALISLVSLLLLAGVLSVMGPDTRDYDVNDRRGWWPGNR*
Ga0126369_1354857423300012971Tropical Forest SoilMAPLIVLAILLLACVFSVVGADSHDYDVNDRRGWWPGHK*
Ga0134087_1021583123300012977Grasslands SoilVEIIVLLTLLLLAGVFSVMGPDQRDYDDTDRRGWWPGRR*
Ga0164309_1014944923300012984SoilMIVILTVVLLAGVLSVVVRDTRDYDDHDRRGWWPGRR*
Ga0164308_1182088113300012985SoilMGQIDDAMSMAAPIILFSLLLLAGVLSVLGPDTRDYDVNDRRGWGPGRR*
Ga0164306_1093293323300012988SoilMIVILTVVLPAGVLSVVVRDSRDYDDRDRRGWWPG
Ga0164305_1023196623300012989SoilMSMAALIILFSLLLLAGVLSVMGPDTRDYDVNDRRGWWPGKR*
Ga0157372_1185713023300013307Corn RhizosphereVEIVIVLTILILAGVLSVVGAAIKKNNVNDRRGWWPGSR*
Ga0120154_112555723300013501PermafrostVEIIIVLTIVLLAGVVSVMRPDSRDYDDTDQRGWWPGRPR*
Ga0120123_114166813300013770PermafrostMEIIILLTILFLAGVVSIMGPDSHDLDDRDRRGWWPGRAR*
Ga0075316_119847823300014314Natural And Restored WetlandsMMIFLTLLLLAGVFSAVGPARHDLDDRDERGWWPGHSRR*
Ga0157380_1284790713300014326Switchgrass RhizosphereMEMIVVLAVVLLAGVLSVVVRDSRDYDDHDRRGWWPGRR*
Ga0132258_10038721123300015371Arabidopsis RhizosphereVVVEIVVVLTILILAGVVSALGPDSRDCDVNDRRGWWPGKR*
Ga0132258_1005945673300015371Arabidopsis RhizosphereMAFVVVFAILILVCVLSVLGRDGRDYDVNDRRGWWPGHRR*
Ga0132258_1037078823300015371Arabidopsis RhizosphereMAMIVVLSFLVLAGVLSVVSRDSHDFDDTDRRGWWPGRR*
Ga0132258_1255225623300015371Arabidopsis RhizosphereMEMIVVLTILILAGVLSVVARDSHDYDDHDRRGWWPGRR*
Ga0132258_1347828923300015371Arabidopsis RhizosphereMCMTAPIILFSLLLLAGVLSVLGPDTRDYDVNDRRGWWPGKR*
Ga0132257_10079996323300015373Arabidopsis RhizosphereMAMLVVLTILILAGVLSVVARDSRDYDDQDRRGWWPGRR*
Ga0132257_10290530623300015373Arabidopsis RhizosphereVEIVIVLTILILAGVLSVVGPDTHDYDVNDRRGWWPG
Ga0132255_10364910323300015374Arabidopsis RhizosphereMTAPIILFSLLLLAGVLSVLGPDTRDYDVNDRRGWWPGKR*
Ga0163161_1099486523300017792Switchgrass RhizosphereMSMTALIVPSFVILAGVLSVMGPDSRDYDVNDRRGWWPGRR
Ga0187786_1023782523300017944Tropical PeatlandMEIIVILTIVLLAGVVSVMGPDTHDYDDTDRRGWWPGRAR
Ga0187785_1043935523300017947Tropical PeatlandVVFAIVILAGVLSVLGPDGRDYDVNDRRGWWPGHHR
Ga0187787_1023921023300018029Tropical PeatlandMEIIVILTIVLLAGVVSVMGPDTHDYDDSDRRGWWPGRAR
Ga0187788_1032835323300018032Tropical PeatlandMSMEIAIVLTILVLAGVLSVMGPDTRDWSVNDRRGWWPGKR
Ga0066667_1144124623300018433Grasslands SoilMEILVLLTVLLLAGVFSVMGPDSHDFDDTDRRGWWPGRSR
Ga0173481_1042008923300019356SoilMEMIVILTIVLLAGVLSVVVRDSRDYDDHDRRGWWPGRR
Ga0173482_1039565623300019361SoilMSMAAPIIIFSLLILAGVLSVLGPDTRDYDVNDRRGWWPGKR
Ga0193730_103043323300020002SoilMAIIILLTIVLLAGVVSIMGPESHDYDDTDRRGWWPGRPR
Ga0247661_104055723300024254SoilMGQIDDATPMAAPIIIFSLLILAGVLSVLGPDTRDYDVNDRRGWWPGRR
Ga0247661_105748623300024254SoilMAILVVLTILVLAGVFSVMGSDSHDWDVNDRRGWWPGHK
Ga0247670_110216923300024283SoilMGQIDDAMCMTAPIILFSLLILAGVLSVLGPDTRDYDVNDRRGWWPGKR
Ga0209642_1019572023300025167SoilMLVILTVLLLAGVYSVVRPDHRDYDDRDRRGWWPGTR
Ga0209641_1074910223300025322SoilMEILAILTILLLAGVYSVVRPDHRDYDDRDRRGWWPGTP
Ga0207645_1099271123300025907Miscanthus RhizosphereVIVLTILILAGVLSVVGPDTHDYDVNDRRGWWPGRR
Ga0207671_1113375223300025914Corn RhizosphereASVEIVIVLTILILAGVLSVVGPDTHDYDVNDRRGWWPGSR
Ga0207657_1032303713300025919Corn RhizosphereVEIVIVLTILILAGVLSVVGPDTHDYDVNDRRGWWPGRCR
Ga0207659_1125074623300025926Miscanthus RhizosphereVVVEIVIVLTILILAGVVSALGPDSRDYDVNDRRGWWPGRR
Ga0207659_1164510323300025926Miscanthus RhizosphereMTQIDDALCVEALILFCFVILAGVFSVMGPDSRDYRVNDRRGWWPGRR
Ga0207687_1042610523300025927Miscanthus RhizosphereDDAMSMTALIVLSFVILAGVLSVMGPDSRDYDVNDRRGWWPGRR
Ga0207690_1154219713300025932Corn RhizosphereVEIVIVLTILILAGVLSVVGPDTHDYDVNDRRGWWP
Ga0207709_1012066313300025935Miscanthus RhizosphereRHPASVEIVIVLTILILAGVLSVVGPDTHDYDVNDRRGWWPGSR
Ga0207709_1102367423300025935Miscanthus RhizosphereMTQIGDALCVEALILLCFVILAGVFSVMGPDSRDYRVNDRRGWWPGRR
Ga0207711_1095352623300025941Switchgrass RhizosphereMSMTALIILSFVILAGVLSVMGPDSRDYDVNDRRGWWPGKK
Ga0207661_1144337923300025944Corn RhizosphereMRRDRHTSHMEVVILFVILLLAGVASVLGPDSHDYDANDRRGWWPGHR
Ga0207651_1158015013300025960Switchgrass RhizosphereVILTIVLLAGVLSVVVRDSRDYDDHDRRGWWPGRR
Ga0207703_1065745623300026035Switchgrass RhizosphereMEMIVVLTIVLLAGVLSVVVRESRDYDDHDRRGWWPGRR
Ga0207703_1192372613300026035Switchgrass RhizosphereVVEEIVIVLMILILDGVVSALGPDSRDYDVNDRRGWWPGRR
Ga0207698_1039973523300026142Corn RhizosphereMSMTALIVLSFVILAGVLSVMGPDSRDYDVNDRRGWWPGRR
Ga0209074_1056435313300027787Agricultural SoilMAMIFVLGFVLLAGVASVISRDTHDFNDTDRRGWWPGRR
Ga0209811_1003701033300027821Surface SoilMEMLVILTVLLLAGVLSVVARDSRDYDDHDRRGWWPGRR
Ga0209069_1089477023300027915WatershedsVEIIVLLTLLLLAGVVSVMGPDSHDYDDTDRRGWWPGNR
Ga0247822_1069501623300028592SoilMEMLVVLTVLLLAGVLSVVARDSRDYDDHDRRGWWPGRK
Ga0307312_1023165033300028828SoilMAMIILLTIVLLAGVVSIMGPECHDYDDTDRRGWWPGRPR
Ga0307300_1009197123300028880SoilLFVLAFLLLAGVFSVISRDSHDFDDTDRRGWWPGRR
Ga0307308_1010964623300028884SoilMAIIILLTILLLAGVVSIMEPECHDYDDTDRRGWWPGRPR
Ga0307304_1002858623300028885SoilMLFVLAFLLLAGVFSVISRDSHDFDDTDRRGWWPGRR
Ga0307497_1014365513300031226SoilMAMIVVLTVLLLAGVLSVVARDSRDYDDHDRRGWWPGRR
Ga0310887_1111216623300031547SoilMAFVVVFAILILVCVLSVLGRDGRDYDVNDRRGWWPGHHR
Ga0310890_1075378723300032075SoilVVVEIVVVLTILILAGVVSALGPDSRDYDVNDRRGWWPGKR
Ga0307472_10276701213300032205Hardwood Forest SoilMAATVLLTILLLACVLSAVRRDDRDLDDRDRRGWWPGRR
Ga0315271_1186587013300032256SedimentLIVLTILLLAGVFSVMGPDAHDHDVNDRRGWWPGNR
Ga0335082_1097435013300032782SoilMAFLVVFAIVILACVLSVLGPDGRDYDVNDRRGWWPGHRS
Ga0247829_1007503623300033550SoilMLVVLTVLLLAGVLSVVARDSRDYDDHDRRGWWPGRK
Ga0247829_1029297323300033550SoilMAFVVVFAILILVCVLSVLGRDRRDYDVNDRRGWWPGHHR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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