Metagenome Family F051046

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051046
Family Type	Metagenome
Number of Sequences	144
Average Sequence Length	47 residues
Representative Sequence	MYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP
Number of Associated Samples	104
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.03 %
% of genes near scaffold ends (potentially truncated)	20.83 %
% of genes from short scaffolds (< 2000 bps)	81.25 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.556 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (38.889 % of family members)
Environment Ontology (ENVO)	Unclassified (39.583 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.694 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.35% β-sheet: 0.00% Coil/Unstructured: 48.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF05685	Uma2	4.86
PF14559	TPR_19	3.47
PF00196	GerE	2.78
PF03544	TonB_C	2.78
PF00282	Pyridoxal_deC	2.08
PF07786	HGSNAT_cat	2.08
PF02265	S1-P1_nuclease	2.08
PF00753	Lactamase_B	2.08
PF13432	TPR_16	1.39
PF12802	MarR_2	1.39
PF00127	Copper-bind	1.39
PF03781	FGE-sulfatase	1.39
PF11138	DUF2911	1.39
PF00589	Phage_integrase	1.39
PF00580	UvrD-helicase	1.39
PF00069	Pkinase	1.39
PF07883	Cupin_2	1.39
PF02604	PhdYeFM_antitox	0.69
PF04307	YdjM	0.69
PF13421	Band_7_1	0.69
PF06736	TMEM175	0.69
PF01734	Patatin	0.69
PF01979	Amidohydro_1	0.69
PF01401	Peptidase_M2	0.69
PF00571	CBS	0.69
PF00892	EamA	0.69
PF14235	DUF4337	0.69
PF06347	SH3_4	0.69
PF03372	Exo_endo_phos	0.69
PF03965	Penicillinase_R	0.69
PF13384	HTH_23	0.69
PF03713	DUF305	0.69
PF01625	PMSR	0.69
PF06452	CBM9_1	0.69
PF04545	Sigma70_r4	0.69
PF08447	PAS_3	0.69
PF03959	FSH1	0.69
PF13365	Trypsin_2	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.56
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	4.86
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	2.78
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	2.08
COG3503	Uncharacterized membrane protein, DUF1624 family	Function unknown [S]	2.08
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	1.39
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	1.39
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	1.39
COG3973	DNA helicase IV	Replication, recombination and repair [L]	1.39
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG0400	Predicted esterase	General function prediction only [R]	0.69
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.69
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.69
COG1988	Membrane-bound metal-dependent hydrolase YbcI, DUF457 family	General function prediction only [R]	0.69
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.69
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	0.69
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.69
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.69
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.69
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.69
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.69

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.56 %
Unclassified	root	N/A	19.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.56 %
Unclassified	root	N/A	19.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.56 %
Unclassified	root	N/A	19.44 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	29.17 %
Unclassified	root	N/A	19.44 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	28.47 %
Unclassified	root	N/A	19.44 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.08 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.44 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	18.06 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	3.47 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.39 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.69 %
candidate division KSB1	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1	0.69 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.44 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	18.06 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	3.47 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.39 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.69 %
unclassified candidate division KSB1	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1	0.69 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.44 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	18.06 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2.78 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.39 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.69 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.69 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.44 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	18.06 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.39 %
Oscillatoriales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriales incertae sedis	0.69 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.69 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.69 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.69 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.69 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.44 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	18.06 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.39 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.69 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	0.69 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.69 %
Microseira	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriales incertae sedis → Microseira	0.69 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.69 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.44 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	18.06 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.39 %
Microseira wollei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriales incertae sedis → Microseira → Microseira wollei	0.69 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	0.69 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.69 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.69 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.69 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002560\|JGI25383J37093_10076274	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1027	Open in IMG/M
3300002560\|JGI25383J37093_10085074	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300002560\|JGI25383J37093_10161521	Not Available	590	Open in IMG/M
3300005167\|Ga0066672_10764891	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300005172\|Ga0066683_10456815	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	782	Open in IMG/M
3300005174\|Ga0066680_10402403	Not Available	870	Open in IMG/M
3300005178\|Ga0066688_10566072	Not Available	730	Open in IMG/M
3300005179\|Ga0066684_10925446	Not Available	567	Open in IMG/M
3300005445\|Ga0070708_100360929	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300005445\|Ga0070708_100390477	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300005445\|Ga0070708_101638359	Not Available	599	Open in IMG/M
3300005446\|Ga0066686_10042092	All Organisms → cellular organisms → Bacteria	2746	Open in IMG/M
3300005446\|Ga0066686_10295527	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1100	Open in IMG/M
3300005446\|Ga0066686_10664002	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300005447\|Ga0066689_10264953	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1060	Open in IMG/M
3300005450\|Ga0066682_10256889	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300005454\|Ga0066687_10345485	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300005468\|Ga0070707_100071337	All Organisms → cellular organisms → Bacteria	3347	Open in IMG/M
3300005468\|Ga0070707_100461871	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300005468\|Ga0070707_100490270	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1190	Open in IMG/M
3300005468\|Ga0070707_100824322	Not Available	892	Open in IMG/M
3300005518\|Ga0070699_100357943	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300005518\|Ga0070699_100385005	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300005536\|Ga0070697_100599145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	968	Open in IMG/M
3300005552\|Ga0066701_10495232	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	757	Open in IMG/M
3300005554\|Ga0066661_10415212	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300005555\|Ga0066692_10383753	Not Available	891	Open in IMG/M
3300005557\|Ga0066704_10357209	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300005586\|Ga0066691_10236060	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300005586\|Ga0066691_10245349	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1051	Open in IMG/M
3300005586\|Ga0066691_10284226	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300005598\|Ga0066706_10835444	Not Available	723	Open in IMG/M
3300005836\|Ga0074470_11310202	Not Available	766	Open in IMG/M
3300005888\|Ga0075289_1021244	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300005895\|Ga0075277_1010548	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1207	Open in IMG/M
3300006755\|Ga0079222_10000209	All Organisms → cellular organisms → Bacteria	12210	Open in IMG/M
3300006796\|Ga0066665_11028063	Not Available	630	Open in IMG/M
3300006797\|Ga0066659_10752586	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300006797\|Ga0066659_11085766	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	669	Open in IMG/M
3300006797\|Ga0066659_11709035	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	531	Open in IMG/M
3300006800\|Ga0066660_11682567	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300006804\|Ga0079221_10000003	All Organisms → cellular organisms → Bacteria	103386	Open in IMG/M
3300006804\|Ga0079221_10550878	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300006852\|Ga0075433_10027596	All Organisms → cellular organisms → Bacteria	4817	Open in IMG/M
3300006871\|Ga0075434_100406152	Not Available	1383	Open in IMG/M
3300006903\|Ga0075426_10515754	All Organisms → cellular organisms → Bacteria → Proteobacteria	889	Open in IMG/M
3300007255\|Ga0099791_10109727	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300007255\|Ga0099791_10397355	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	663	Open in IMG/M
3300007258\|Ga0099793_10129615	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300009012\|Ga0066710_101025603	Not Available	1274	Open in IMG/M
3300009012\|Ga0066710_101773654	Not Available	934	Open in IMG/M
3300009088\|Ga0099830_10517420	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	974	Open in IMG/M
3300009088\|Ga0099830_11715025	Not Available	524	Open in IMG/M
3300009089\|Ga0099828_11754465	Not Available	545	Open in IMG/M
3300009089\|Ga0099828_12021055	Not Available	504	Open in IMG/M
3300009090\|Ga0099827_10294606	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300009137\|Ga0066709_101890723	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	831	Open in IMG/M
3300009143\|Ga0099792_10139473	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300009162\|Ga0075423_12618104	Not Available	551	Open in IMG/M
3300010304\|Ga0134088_10488949	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	606	Open in IMG/M
3300010371\|Ga0134125_10434068	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300010396\|Ga0134126_11190828	Not Available	847	Open in IMG/M
3300011269\|Ga0137392_10361875	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300011269\|Ga0137392_10400382	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300011271\|Ga0137393_10116542	All Organisms → cellular organisms → Bacteria	2199	Open in IMG/M
3300012189\|Ga0137388_10501260	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1128	Open in IMG/M
3300012189\|Ga0137388_11990899	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300012199\|Ga0137383_10647835	Not Available	772	Open in IMG/M
3300012199\|Ga0137383_10985458	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300012201\|Ga0137365_10090200	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2308	Open in IMG/M
3300012203\|Ga0137399_10816886	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300012206\|Ga0137380_10134480	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M
3300012207\|Ga0137381_10887989	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	771	Open in IMG/M
3300012208\|Ga0137376_10637216	Not Available	921	Open in IMG/M
3300012211\|Ga0137377_11414083	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300012211\|Ga0137377_11861997	Not Available	520	Open in IMG/M
3300012285\|Ga0137370_10162371	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1297	Open in IMG/M
3300012285\|Ga0137370_10402496	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	829	Open in IMG/M
3300012350\|Ga0137372_10161081	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1824	Open in IMG/M
3300012350\|Ga0137372_10534669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	868	Open in IMG/M
3300012354\|Ga0137366_10011306	All Organisms → cellular organisms → Bacteria	7029	Open in IMG/M
3300012354\|Ga0137366_10050520	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3193	Open in IMG/M
3300012354\|Ga0137366_10722049	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	710	Open in IMG/M
3300012356\|Ga0137371_10681888	Not Available	786	Open in IMG/M
3300012357\|Ga0137384_10723199	Not Available	808	Open in IMG/M
3300012359\|Ga0137385_10111056	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	2425	Open in IMG/M
3300012361\|Ga0137360_11659577	Not Available	544	Open in IMG/M
3300012532\|Ga0137373_10140629	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300012582\|Ga0137358_10123395	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300012683\|Ga0137398_10041109	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2688	Open in IMG/M
3300012683\|Ga0137398_10857707	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012685\|Ga0137397_10038216	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3434	Open in IMG/M
3300012917\|Ga0137395_10120793	All Organisms → cellular organisms → Bacteria	1765	Open in IMG/M
3300012918\|Ga0137396_10393171	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1027	Open in IMG/M
3300012918\|Ga0137396_10496680	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	904	Open in IMG/M
3300012918\|Ga0137396_10788290	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	699	Open in IMG/M
3300012918\|Ga0137396_10939550	Not Available	631	Open in IMG/M
3300012922\|Ga0137394_11270285	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012925\|Ga0137419_11669860	Not Available	543	Open in IMG/M
3300012929\|Ga0137404_10048662	All Organisms → cellular organisms → Bacteria	3239	Open in IMG/M
3300012929\|Ga0137404_10868007	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	822	Open in IMG/M
3300012930\|Ga0137407_10008958	All Organisms → cellular organisms → Bacteria	6986	Open in IMG/M
3300012930\|Ga0137407_10624000	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300012931\|Ga0153915_11551035	Not Available	775	Open in IMG/M
3300014154\|Ga0134075_10133225	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1059	Open in IMG/M
3300014157\|Ga0134078_10238681	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300015264\|Ga0137403_10078015	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3349	Open in IMG/M
3300017656\|Ga0134112_10106460	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1056	Open in IMG/M
3300018056\|Ga0184623_10013240	All Organisms → cellular organisms → Bacteria	3587	Open in IMG/M
3300018071\|Ga0184618_10045485	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300018078\|Ga0184612_10363562	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300018431\|Ga0066655_10515061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriales incertae sedis → Microseira → Microseira wollei	794	Open in IMG/M
3300018433\|Ga0066667_11476627	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	600	Open in IMG/M
3300018468\|Ga0066662_10307156	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300020004\|Ga0193755_1000507	All Organisms → cellular organisms → Bacteria	11315	Open in IMG/M
3300020004\|Ga0193755_1062895	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1204	Open in IMG/M
3300020170\|Ga0179594_10335519	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	573	Open in IMG/M
3300021046\|Ga0215015_10614041	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	9340	Open in IMG/M
3300021086\|Ga0179596_10202841	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300025922\|Ga0207646_10234702	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300025922\|Ga0207646_10318009	Not Available	1406	Open in IMG/M
3300025922\|Ga0207646_10568802	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1018	Open in IMG/M
3300026300\|Ga0209027_1028658	All Organisms → cellular organisms → Bacteria	2108	Open in IMG/M
3300026301\|Ga0209238_1102173	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	970	Open in IMG/M
3300026308\|Ga0209265_1223921	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	516	Open in IMG/M
3300026318\|Ga0209471_1006915	All Organisms → cellular organisms → Bacteria → Proteobacteria	6093	Open in IMG/M
3300026333\|Ga0209158_1085799	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300026524\|Ga0209690_1073037	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300026529\|Ga0209806_1326576	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300026537\|Ga0209157_1078545	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300026547\|Ga0209156_10433151	All Organisms → cellular organisms → Bacteria → FCB group	545	Open in IMG/M
3300026551\|Ga0209648_10015591	All Organisms → cellular organisms → Bacteria	6632	Open in IMG/M
3300026551\|Ga0209648_10075739	All Organisms → cellular organisms → Bacteria	2821	Open in IMG/M
3300026555\|Ga0179593_1026150	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1684	Open in IMG/M
3300027725\|Ga0209178_1000029	All Organisms → cellular organisms → Bacteria	38359	Open in IMG/M
3300027725\|Ga0209178_1269028	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300027765\|Ga0209073_10028629	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1708	Open in IMG/M
3300027765\|Ga0209073_10057047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1297	Open in IMG/M
3300027875\|Ga0209283_10526052	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300027882\|Ga0209590_10467211	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300028792\|Ga0307504_10461879	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300031720\|Ga0307469_10648654	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300031962\|Ga0307479_10028700	All Organisms → cellular organisms → Bacteria	5295	Open in IMG/M
3300031962\|Ga0307479_10123139	All Organisms → cellular organisms → Bacteria	2531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.22%
Host-Associated	Host-Associated	2.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.75%
Aquatic	Environmental → Aquatic	3.47%
Plants	Host-Associated → Plants	2.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.75%
Sediment	Environmental → Aquatic → Sediment	2.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.78%
Freshwater	Environmental → Aquatic → Freshwater	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.33%
Loam	Environmental → Terrestrial → Soil → Loam	9.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	38.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.08%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.39%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.39%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.69%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25383J37093_100762742	3300002560	Grasslands Soil	MYWGHGIGILAGLIWLAAVIYLLTLATRLVSAIERIATRFEAKP*
JGI25383J37093_100850742	3300002560	Grasslands Soil	MSGMYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
JGI25383J37093_101615212	3300002560	Grasslands Soil	MYWGHGFGGVGYLAGLIWLSAVIYLLTLATRLVRAIERIANKFESKAQ*
Ga0066672_107648912	3300005167	Soil	MYWGHGFWGVGYLAGLIWLAAVIYLLTLATRLVRAIERIASKFESKAQ*
Ga0066683_104568151	3300005172	Soil	MYWGHGFWGVGYLAGLIWLAAVIYLLTLATRLVRAIERIANKFESKAQ*
Ga0066680_104024031	3300005174	Soil	MYWGHGFGGVGYLAGLIWLAAVIYLLTLATRLVRAIERIANKFESKAQ*
Ga0066688_105660721	3300005178	Soil	MSGMYWGHGWWFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEPKP*
Ga0066684_109254461	3300005179	Soil	MYWEHGFWGVGLAGLIWLAAVIYLLTLATRLVRAIERIANKFEGKAQ*
Ga0070708_1003609292	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MYWGHGYWILVPLVWLAAVIYLLTLATRLVRAIERIANKFETKP*
Ga0070708_1003904772	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSGMYWGHGWGLGAVAALVWLSAVIYLLTLATRLVRAIERIAAKVEAKP*
Ga0070708_1016383591	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MYWGHGVGILAGLIWLAAVIYLLTLATRLVRAIERIANKFEAKP*
Ga0066686_100420924	3300005446	Soil	MYWGHGFSILVGLIWLAAVIYLLTLATRLVRAIEQIANRFEAKP*
Ga0066686_102955271	3300005446	Soil	MERVYWGQGFSIVVGLVWLAVVIYVLTLATRLVRAIERIARKFDSKP*
Ga0066686_106640022	3300005446	Soil	MSWGHGVESLAGLIWIAVVAYLITLGARLVRAIERIATKFENKPQ*
Ga0066689_102649533	3300005447	Soil	MYWGHGIGILAGLIWLAAVIYLLTLVTRLVRAIERIASKFESKP*
Ga0066682_102568893	3300005450	Soil	MEPVYWDHGFGFGVVAGLVWLAAVIYVLTLATRLVRAIERIATKFESKP*
Ga0066687_103454852	3300005454	Soil	MYWEHGFWGVGLAGLIWLAAVIYLLTLATRLVRAIERIANKFESKAQ*
Ga0070707_1000713373	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MYWGHGVGILAGLIWLAAVIYLLTLATRLVRAIERIANKFEAKS*
Ga0070707_1004618712	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MYWGHGYWILVPLVWLAAVIYLLTLATRLVRAIERIANRFETKP*
Ga0070707_1004902703	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSGMYWGHAWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAK
Ga0070707_1008243221	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LVPPSYSRSSVSPHGFGFLAGLIWLAAVIYLLTLAARLVRAIERIANKVETKP*
Ga0070699_1003579432	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSGMYWGHAWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0070699_1003850053	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VSPHGFGFLAGLIWLAAVIYLLTLAARLVRAIERIANKVETKP*
Ga0070697_1005991451	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MYWVHGWFGILAGLIWLAAVIYLLTLATRLVRAIERIANKFESKAQ*
Ga0066701_104952322	3300005552	Soil	VQEGPMYWGHGIGILAGLIWLAAVIYLLTLATRLVSAIERIATRFEAKP*
Ga0066661_104152121	3300005554	Soil	MSGMYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEPKP*
Ga0066692_103837532	3300005555	Soil	MYWGHGFGGVGYLAGLIWLAAVIYLLTLATRLVRAIERIANKFEGKAQ*
Ga0066704_103572092	3300005557	Soil	MSGMYWGHGWWFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0066691_102360603	3300005586	Soil	MSGMYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKF
Ga0066691_102453493	3300005586	Soil	MEPVYGGWGHGLGFSVVAGLVWLVVVIYVLTLATRLVRAIERIATKFESKP*
Ga0066691_102842262	3300005586	Soil	MSGMYWGHGWWFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEPRP*
Ga0066706_108354443	3300005598	Soil	MYWGHGFGYVAGLIWLAAVVYLLTLGTRLVRAIERIATKFESKP*
Ga0074470_113102021	3300005836	Sediment (Intertidal)	EAAMYWGHGLGFLAGLIWLAVVIYLLTLAARFVRAIERIADRTETKPT*
Ga0075289_10212442	3300005888	Rice Paddy Soil	MYGGHWFWGGFGYLAGLIWLAAVVYVLTLATRLVRAIERIANKFESKAP*
Ga0075277_10105482	3300005895	Rice Paddy Soil	MYGAHWFSGFGYLAALVWLAAVLYVLTLATRLVRAIERIANKFESKAS*
Ga0079222_1000020914	3300006755	Agricultural Soil	MAALYWGHGFGFGFGFVSGLVWLAVVIYLLVLATRLVRALERIATKFESKP*
Ga0066665_110280632	3300006796	Soil	MSGMYWGHGWWFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEPKS*
Ga0066659_107525862	3300006797	Soil	MSGMYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKQ*
Ga0066659_110857661	3300006797	Soil	MSGMYWGHGWGLGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0066659_117090352	3300006797	Soil	GFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0066660_116825672	3300006800	Soil	RRPMYWGHGFWGVGYLAGLIWLAAVIYLLTLATRLVRAIERIASKFESKAQ*
Ga0079221_1000000335	3300006804	Agricultural Soil	MFFHYYFPGLGLLAGLIWLAAVVYLLTLATRLVRALERIAARYESKS*
Ga0079221_105508781	3300006804	Agricultural Soil	ESRNASRPLHLELTMAAVYWGHGFGFGFVAGLVWLAVVAYLLLLATRLVRALERIATKFEGKP*
Ga0075433_100275967	3300006852	Populus Rhizosphere	MYWHWHGFGFLAGLIWLAALIYLLTLAARLVRAIERIANKVETRP*
Ga0075434_1004061521	3300006871	Populus Rhizosphere	MYWHWHGFGFLAGLIWLAALIYLLTLAARLVRAIERIANKVET
Ga0075426_105157542	3300006903	Populus Rhizosphere	MSGLYWGHGWGLGAVVALVWLSAVIYLLTLATRLVRAIERIATKFEARP*
Ga0099791_101097272	3300007255	Vadose Zone Soil	MYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0099791_103973552	3300007255	Vadose Zone Soil	MYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIA
Ga0099793_101296152	3300007258	Vadose Zone Soil	MYWGHGWAFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0066710_1010256031	3300009012	Grasslands Soil	MERVYWGQGFSIVVGLVWLAVVIYVLTLATRLVRAIERIARKFDSKP
Ga0066710_1017736543	3300009012	Grasslands Soil	MYWGHGFGGVGYLAGLIWLAAVIYLLTLATRLVRAIERIANKFEGKAQ
Ga0099830_105174202	3300009088	Vadose Zone Soil	LEPVYWGHGFGFGVVAGLVWLAVIVYVLTLATRLVRAIERIATEFESKP*
Ga0099830_117150251	3300009088	Vadose Zone Soil	LKQLILERAMYWGHGFRILVGLIWLAAVIYLLTLATRLVRAIEQIANKFESKPQ*
Ga0099828_117544652	3300009089	Vadose Zone Soil	MYYGREFGFVGGLIWLAAAIYLLTLAARLVRAIERIAEKVGPNPPK
Ga0099828_120210551	3300009089	Vadose Zone Soil	MEPAYWGHGFGFGFVAALVWLAAVIYVLTLATRLVRAIERIATKFESKS*
Ga0099827_102946062	3300009090	Vadose Zone Soil	MSGVYWGHGWGFGAIAALVWLSAVIYLLTLATRLVRAIERIAMKFEAKP*
Ga0066709_1018907232	3300009137	Grasslands Soil	MYWGHGWWFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0099792_101394731	3300009143	Vadose Zone Soil	MYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKLEAKP*
Ga0075423_126181042	3300009162	Populus Rhizosphere	MYWHWHGFGFLAGLIWLAALIYLLTLAARLVRAIERIA
Ga0134088_104889492	3300010304	Grasslands Soil	VDTLDHHVQEGPMYWGHGFSILVGLIWLAAVIYLLTLATRLVRAIEQIANRFEAKP*
Ga0134125_104340682	3300010371	Terrestrial Soil	MYWHWHGFGFLSGLIWLAAVIYLLTLAARLVRAIERIANKVETKP*
Ga0134126_111908281	3300010396	Terrestrial Soil	MYWHWHGFGFLADLIWLAALIYLLTLAARLVRAIERIANKVETKP*
Ga0137392_103618751	3300011269	Vadose Zone Soil	MSGVYWGHGWGVGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0137392_104003823	3300011269	Vadose Zone Soil	VGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0137393_101165425	3300011271	Vadose Zone Soil	MSGVYWGHGWGVGAVAALVWLSAVIYLLTLATRLVRA
Ga0137388_105012602	3300012189	Vadose Zone Soil	MYWGHGWGLGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0137388_119908992	3300012189	Vadose Zone Soil	WGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0137383_106478351	3300012199	Vadose Zone Soil	MEPVYWGHGFGFSVVAGLVWLAVVIYVLTLATRLVRAIERIATKF*
Ga0137383_109854582	3300012199	Vadose Zone Soil	MYWGHGFWGVGYLAGLIWLAAVIYLLTLATRLVRAIERIANEFESKAQ*
Ga0137365_100902003	3300012201	Vadose Zone Soil	MSGVYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0137399_108168861	3300012203	Vadose Zone Soil	MSGGYWGHGYWFGRVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0137380_101344802	3300012206	Vadose Zone Soil	MAAVYWGHGFGLGFGFVAGLVWLAVVTYLLLLATRLVRAIERIATKFEGKP*
Ga0137381_108879892	3300012207	Vadose Zone Soil	MYWGHGFGGVGYLAGLIWLAAVIYLLTLATRLVRAIERIANEFESKAQ*
Ga0137376_106372163	3300012208	Vadose Zone Soil	LEEPMEPAYWGHGFGFSVVVGLVWLAAVIYVLTLATRLVRAVERIATKFESKP*
Ga0137377_114140832	3300012211	Vadose Zone Soil	MYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIAMKFEAKP*
Ga0137377_118619972	3300012211	Vadose Zone Soil	MSGMYWGHGWGFGALAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0137370_101623711	3300012285	Vadose Zone Soil	MYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFDAKP*
Ga0137370_104024962	3300012285	Vadose Zone Soil	FGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0137372_101610813	3300012350	Vadose Zone Soil	MYWGHGFWGVGYLAGLIWLAAVIYLLTLATRLVRAIERIANK
Ga0137372_105346691	3300012350	Vadose Zone Soil	MYWGHGIGILAGLIWLAAVIYLLTLITRLVRAIERIANKFEAKP*
Ga0137366_100113067	3300012354	Vadose Zone Soil	MSGVYWGHGWWFGAIAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0137366_100505202	3300012354	Vadose Zone Soil	MAALYWGHGFGFGFGFVAGLVWLAVVTYLLLLATRLVRAIERIATKFEGKP*
Ga0137366_107220491	3300012354	Vadose Zone Soil	MYWGHGFWGVGYLAGLIWLAAVIYLLTLATRLVRAIERIANKFESRAQ*
Ga0137371_106818882	3300012356	Vadose Zone Soil	MEPVYWDHGFGFGVVAGLVWLAAFIYVLTLATRLVRAIERIATKFESKP*
Ga0137384_107231991	3300012357	Vadose Zone Soil	PRSIHLEEKMEPVYGGWGHGLGFSVVAGLVWLVVVIYVLTLATRLVRAIERIATQFESKP
Ga0137385_101110561	3300012359	Vadose Zone Soil	MEPVYGGWGHGLGRSVVAGLVWLVVVLYVLTLATRLVRAIERIATKFESKP*
Ga0137360_116595771	3300012361	Vadose Zone Soil	ERTMYWAHGWFGILAGLTWLAAVIYLLTLATRLVRAIERIANKFESKAQ*
Ga0137373_101406292	3300012532	Vadose Zone Soil	MYWGHGIGILAGLIWLAAVIYLLTLVTRLVRAIERIANKFEAKP*
Ga0137358_101233951	3300012582	Vadose Zone Soil	MYWGHGWGFGAVAALVWLSAVLYLLTHATRLGRAIERIATKFEAKP*
Ga0137398_100411092	3300012683	Vadose Zone Soil	MYWGHGWGFGAVAALVWLSAVIYLLTLDTRLVRAIERIATKFEAKP*
Ga0137398_108577072	3300012683	Vadose Zone Soil	MSGGYWGHGYWFGLVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0137397_100382161	3300012685	Vadose Zone Soil	MYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFE
Ga0137395_101207933	3300012917	Vadose Zone Soil	MSGMYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKLEAKP*
Ga0137396_103931711	3300012918	Vadose Zone Soil	MYWGHGVGILAGLIWLAAVIYLLTLATRLVSAIERIATRFEAKQ*
Ga0137396_104966801	3300012918	Vadose Zone Soil	MYWGHGWGFGAVAALVWLSAVLYLLTLATRLVRAIERIATKFEAKP*
Ga0137396_107882902	3300012918	Vadose Zone Soil	MSGGYWGHGYGFGLVAALVWLSAVIYLLTLATRLVRAIERIATRFEAKP*
Ga0137396_109395502	3300012918	Vadose Zone Soil	MYYYHHAFGIVGAVVWLAVAIYLLTLATRLVRAIEKIAGKSDAKPS*
Ga0137394_112702852	3300012922	Vadose Zone Soil	MSGMYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIAMKFEAKP*
Ga0137419_116698601	3300012925	Vadose Zone Soil	MYWGHGWGLGAVAALVWLLAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0137404_100486624	3300012929	Vadose Zone Soil	MSGMYWGHGWGVGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0137404_108680071	3300012929	Vadose Zone Soil	GMYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIAMKFEAKP*
Ga0137407_100089588	3300012930	Vadose Zone Soil	MYWGHGWGVGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0137407_106240002	3300012930	Vadose Zone Soil	MSGMYWGHGWGFAAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0153915_115510352	3300012931	Freshwater Wetlands	MYWAHGFWGGFGYLAGLIWLAAVIYILTLATRLVRAIERIANKFESKAP*
Ga0134075_101332252	3300014154	Grasslands Soil	MAGVYWGHGYGFGIVVGLVWLSAVIYLLTLATRLLRAMERIATKFETKP*
Ga0134078_102386812	3300014157	Grasslands Soil	MSGMYWGHGWGFGAVAALVWLSAIIYLLTLATRLVRAIE
Ga0137403_100780153	3300015264	Vadose Zone Soil	WGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP*
Ga0134112_101064602	3300017656	Grasslands Soil	MSWGHGVESLAGLIWIAVVAYLITLGARLVRAIERIATKFENKPQ
Ga0184623_100132405	3300018056	Groundwater Sediment	MSWGHGVEGLVGLLWAAVAVYLLTLGARLVRAIERIASKFEGKPQ
Ga0184618_100454851	3300018071	Groundwater Sediment	MSGMYWGHGWGLGAVAALVWLLAVIYLLTLATRLVRAIERIATKFEAKP
Ga0184612_103635622	3300018078	Groundwater Sediment	MSWGHGVDSFVGLLWAAVVVYLLTLGARLVRAIERIASKFEGKPQ
Ga0066655_105150612	3300018431	Grasslands Soil	MYWGHGVGILAGLIWLAAVIYLLTLATRLVRAIERIANKFEAKP
Ga0066667_114766271	3300018433	Grasslands Soil	MSGMYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP
Ga0066662_103071562	3300018468	Grasslands Soil	MYWGHGIGILAGLIWLAAVIYLLTLATRLVSAIERIATRFEAKP
Ga0193755_10005073	3300020004	Soil	MSGMYWGHGWGFGAVAALVWLLAVIYLLTLATRLVRAIERIATKFEAKP
Ga0193755_10628952	3300020004	Soil	MSGMYWGHGWAFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFETKP
Ga0179594_103355191	3300020170	Vadose Zone Soil	MSGMYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAI
Ga0215015_106140413	3300021046	Soil	MWWYGHGLGIIAGLVWLGAVIYLLTLATRLVRAIEQIAAKFESRAG
Ga0179596_102028412	3300021086	Vadose Zone Soil	MSGMYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKLEAKP
Ga0207646_102347023	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MYWGHGVGILAGLIWLAAVIYLLTLATRLVRAIERIANKFEAKS
Ga0207646_103180091	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VSPHGFGFLAGLIWLAAVIYLLTLAARLVRAIERIANKVETKP
Ga0207646_105688022	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSGMYWGHAWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKQ
Ga0209027_10286581	3300026300	Grasslands Soil	SGMYWGHGWGLGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP
Ga0209238_11021731	3300026301	Grasslands Soil	MSGMYWGHGWGLGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP
Ga0209265_12239212	3300026308	Soil	MYWEHGFWGVGLAGLIWLAAVIYLLTLATRLVRAIERIANKFESKAQ
Ga0209471_10069155	3300026318	Soil	MSGMYWGHGWGFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEPKP
Ga0209158_10857992	3300026333	Soil	MSGMYWGHGWWFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEPRP
Ga0209690_10730372	3300026524	Soil	MYWGHGFGGVGYLAGLIWLAAVIYLLTLATRLVRAIERIANKFESKAQ
Ga0209806_13265762	3300026529	Soil	MSGMYWGHGWWFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEPKP
Ga0209157_10785452	3300026537	Soil	MYWGHGFSILVGLIWLAAVIYLLTLATRLVRAIEQIANRFEAKP
Ga0209156_104331512	3300026547	Soil	MYWEHGFWGVGLAGLIWLAAVIYLLTLATRLVRAIERIANK
Ga0209648_100155915	3300026551	Grasslands Soil	MMWYGHGLGIIVGLVWLGAVIYLLTLATRLVRAIEQIAARFDGKVG
Ga0209648_100757392	3300026551	Grasslands Soil	MWWYGHGLGIIAGLVWLGAVIYLLTLATRLVRAIEHIAAKFESKAG
Ga0179593_10261502	3300026555	Vadose Zone Soil	RAGVCAPVVALVWFSAVIYLLTLATRLVRAIERIATKFEAK
Ga0209178_100002935	3300027725	Agricultural Soil	MFFHYYFPGLGLLAGLIWLAAVVYLLTLATRLVRALERIAARYESKS
Ga0209178_12690282	3300027725	Agricultural Soil	HLELTMAAVYWGHGFGFGFVAGLVWLAVVAYLLLLATRLVRALERIATKFEGKP
Ga0209073_100286292	3300027765	Agricultural Soil	GFGFGFGFVSGLVWLAVVIYLLVLATRLVRALERIATKFESKP
Ga0209073_100570471	3300027765	Agricultural Soil	MAALYWGHGFGFGFGFVSGLVWLAVVIYLLVLATRLVRALERIATKFESKP
Ga0209283_105260521	3300027875	Vadose Zone Soil	MSGVYWGHGWGVGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP
Ga0209590_104672112	3300027882	Vadose Zone Soil	MSGVYWGHGWGFGAIAALVWLSAVIYLLTLATRLVRAIERIAMKFEAKP
Ga0307504_104618792	3300028792	Soil	MSGVYWGHGWAFGAVAALVWLSAVIYLLTLATRLVRAIERIATKFEAKP
Ga0307469_106486541	3300031720	Hardwood Forest Soil	MSGLFWGHGWGFGAVVALVWLSAVIYLLTLATRLVRAIERIATKFEDRP
Ga0307479_100287003	3300031962	Hardwood Forest Soil	MYWGHGIGILAGLIWLAAVIYLLTLATRLVSAIERIAAKFEAKP
Ga0307479_101231392	3300031962	Hardwood Forest Soil	MWWYGHGLGIVAGLVWLGAVIYLLTLATRLVRAIEHIADKFDGKPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F051046

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences