Metagenome / Metatranscriptome Family F051025

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F051025
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	82 residues
Representative Sequence	MKSRDAIRAIAGVLLCATGLWLALPTPYRERTFLIDAGGCRLETTIVEKQEGGSQGSVLLFHGISANKKIMSYLARGFAEQGLRVY
Number of Associated Samples	110
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.14 %
% of genes near scaffold ends (potentially truncated)	97.92 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (95.139 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (48.611 % of family members)
Environment Ontology (ENVO)	Unclassified (46.528 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.611 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 30.70% β-sheet: 21.05% Coil/Unstructured: 48.25%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF01467	CTP_transf_like	34.72
PF04116	FA_hydroxylase	3.47
PF02559	CarD_CdnL_TRCF	3.47
PF03352	Adenine_glyco	2.08
PF02518	HATPase_c	1.39
PF07730	HisKA_3	1.39
PF12697	Abhydrolase_6	1.39
PF13495	Phage_int_SAM_4	0.69
PF00072	Response_reg	0.69
PF00106	adh_short	0.69
PF03461	TRCF	0.69
PF12680	SnoaL_2	0.69
PF07228	SpoIIE	0.69
PF00903	Glyoxalase	0.69
PF01546	Peptidase_M20	0.69
PF13624	SurA_N_3	0.69
PF00557	Peptidase_M24	0.69
PF02129	Peptidase_S15	0.69
PF03486	HI0933_like	0.69
PF09265	Cytokin-bind	0.69
PF13673	Acetyltransf_10	0.69
PF12849	PBP_like_2	0.69
PF00593	TonB_dep_Rec	0.69
PF01872	RibD_C	0.69
PF00753	Lactamase_B	0.69
PF02082	Rrf2	0.69
PF00069	Pkinase	0.69
PF00487	FA_desaturase	0.69
PF00881	Nitroreductase	0.69
PF05973	Gp49	0.69
PF01841	Transglut_core	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	3.47
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.78
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	2.08
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	1.39
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.39
COG1197	Transcription-repair coupling factor (superfamily II helicase)	Transcription [K]	1.39
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.39
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.39
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.39
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.39
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	0.69
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.69
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.69
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	0.69
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.69
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.69
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	0.69
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	0.69
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.69
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.69
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.69
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.69
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.69
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.69
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	0.69
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.69
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.69
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.69
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	0.69
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.69
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.69
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	0.69
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.69
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.14 %
Unclassified	root	N/A	4.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.14 %
Unclassified	root	N/A	4.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.14 %
Unclassified	root	N/A	4.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.00 %
Unclassified	root	N/A	4.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	56.94 %
Unclassified	root	N/A	4.86 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.39 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.86 %
Unclassified	root	N/A	4.86 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	2.08 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.69 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.86 %
Unclassified	root	N/A	4.86 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	2.08 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.69 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.86 %
Unclassified	root	N/A	4.86 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	2.08 %
Phaeobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Phaeobacter	0.69 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	0.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.86 %
Unclassified	root	N/A	4.86 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	2.08 %
Phaeobacter piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Phaeobacter → Phaeobacter piscinae	0.69 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	0.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.86 %
Unclassified	root	N/A	4.86 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	2.08 %
unclassified Massilia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia	0.69 %
Phaeobacter piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Phaeobacter → Phaeobacter piscinae	0.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.86 %
Unclassified	root	N/A	4.86 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	2.08 %
Massilia sp. 9096	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia → Massilia sp. 9096	0.69 %
Phaeobacter piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Phaeobacter → Phaeobacter piscinae	0.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001089\|JGI12683J13190_1009785	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300001593\|JGI12635J15846_10750879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300002557\|JGI25381J37097_1015582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1337	Open in IMG/M
3300002914\|JGI25617J43924_10055605	All Organisms → cellular organisms → Bacteria → Acidobacteria	1442	Open in IMG/M
3300002915\|JGI25387J43893_1020354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300002916\|JGI25389J43894_1018482	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300002917\|JGI25616J43925_10045493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1912	Open in IMG/M
3300004092\|Ga0062389_102643037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300005174\|Ga0066680_10749269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300005180\|Ga0066685_11035843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300005184\|Ga0066671_10155238	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300005186\|Ga0066676_10184219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1333	Open in IMG/M
3300005555\|Ga0066692_10271211	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300005556\|Ga0066707_10774400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300006794\|Ga0066658_10535996	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300007255\|Ga0099791_10476782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300007255\|Ga0099791_10509126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300007258\|Ga0099793_10095454	All Organisms → cellular organisms → Bacteria → Acidobacteria	1371	Open in IMG/M
3300007258\|Ga0099793_10668245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300009012\|Ga0066710_102473271	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300009089\|Ga0099828_10146907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2081	Open in IMG/M
3300009089\|Ga0099828_10161983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1982	Open in IMG/M
3300009089\|Ga0099828_10979160	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300009089\|Ga0099828_11929893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300009090\|Ga0099827_10047758	All Organisms → cellular organisms → Bacteria → Proteobacteria	3205	Open in IMG/M
3300009137\|Ga0066709_104270721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300009143\|Ga0099792_10314980	All Organisms → cellular organisms → Bacteria → Acidobacteria	933	Open in IMG/M
3300009143\|Ga0099792_10476445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300010320\|Ga0134109_10119342	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300010322\|Ga0134084_10362533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300010335\|Ga0134063_10036263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2115	Open in IMG/M
3300010335\|Ga0134063_10129170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1161	Open in IMG/M
3300010343\|Ga0074044_11021244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300010364\|Ga0134066_10219749	Not Available	641	Open in IMG/M
3300011269\|Ga0137392_10038721	All Organisms → cellular organisms → Bacteria → Acidobacteria	3516	Open in IMG/M
3300011271\|Ga0137393_10889419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300012096\|Ga0137389_10732511	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300012189\|Ga0137388_10574466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1048	Open in IMG/M
3300012200\|Ga0137382_11198688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300012202\|Ga0137363_10778846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300012203\|Ga0137399_10222055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1541	Open in IMG/M
3300012207\|Ga0137381_11795050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300012208\|Ga0137376_11700872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300012209\|Ga0137379_10904526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300012210\|Ga0137378_10100464	All Organisms → cellular organisms → Bacteria	2655	Open in IMG/M
3300012211\|Ga0137377_10447770	All Organisms → cellular organisms → Bacteria → Proteobacteria	1229	Open in IMG/M
3300012211\|Ga0137377_10506149	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300012349\|Ga0137387_10044107	All Organisms → cellular organisms → Bacteria	2946	Open in IMG/M
3300012349\|Ga0137387_10080266	All Organisms → cellular organisms → Bacteria	2241	Open in IMG/M
3300012349\|Ga0137387_10761138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300012351\|Ga0137386_10056468	All Organisms → cellular organisms → Bacteria	2719	Open in IMG/M
3300012359\|Ga0137385_10195605	All Organisms → cellular organisms → Bacteria → Acidobacteria	1767	Open in IMG/M
3300012359\|Ga0137385_10392194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1185	Open in IMG/M
3300012361\|Ga0137360_10108457	All Organisms → cellular organisms → Bacteria → Acidobacteria	2138	Open in IMG/M
3300012361\|Ga0137360_10220974	All Organisms → cellular organisms → Bacteria → Acidobacteria	1543	Open in IMG/M
3300012361\|Ga0137360_10300618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1332	Open in IMG/M
3300012361\|Ga0137360_10912735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300012361\|Ga0137360_11524368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300012362\|Ga0137361_11224646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300012362\|Ga0137361_11429197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300012363\|Ga0137390_10827963	Not Available	883	Open in IMG/M
3300012363\|Ga0137390_11587818	Not Available	592	Open in IMG/M
3300012683\|Ga0137398_10392753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300012685\|Ga0137397_10010037	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6594	Open in IMG/M
3300012918\|Ga0137396_10744433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300012922\|Ga0137394_10708059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300012924\|Ga0137413_10164110	All Organisms → cellular organisms → Bacteria → Acidobacteria	1464	Open in IMG/M
3300012925\|Ga0137419_10028911	All Organisms → cellular organisms → Bacteria → Acidobacteria	3366	Open in IMG/M
3300012925\|Ga0137419_11120276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300012925\|Ga0137419_11143512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300012925\|Ga0137419_11723416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300012927\|Ga0137416_10006110	All Organisms → cellular organisms → Bacteria → Acidobacteria	6898	Open in IMG/M
3300012927\|Ga0137416_10114827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2051	Open in IMG/M
3300012927\|Ga0137416_11254074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300012927\|Ga0137416_11262200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	666	Open in IMG/M
3300012927\|Ga0137416_11491594	Not Available	614	Open in IMG/M
3300012930\|Ga0137407_11876007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300012972\|Ga0134077_10023041	All Organisms → cellular organisms → Bacteria → Acidobacteria	2156	Open in IMG/M
3300014150\|Ga0134081_10278933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300014157\|Ga0134078_10423492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300015051\|Ga0137414_1130410	Not Available	827	Open in IMG/M
3300015051\|Ga0137414_1171984	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300015054\|Ga0137420_1042119	All Organisms → cellular organisms → Bacteria	4669	Open in IMG/M
3300015054\|Ga0137420_1342081	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300015242\|Ga0137412_10182756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1681	Open in IMG/M
3300015356\|Ga0134073_10183106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300017822\|Ga0187802_10036231	All Organisms → cellular organisms → Bacteria → Acidobacteria	1770	Open in IMG/M
3300017936\|Ga0187821_10287864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300017955\|Ga0187817_10241171	All Organisms → cellular organisms → Bacteria → Acidobacteria	1152	Open in IMG/M
3300017995\|Ga0187816_10007914	All Organisms → cellular organisms → Bacteria → Acidobacteria	3830	Open in IMG/M
3300018012\|Ga0187810_10387972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300018064\|Ga0187773_10830348	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300018433\|Ga0066667_10973428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300018482\|Ga0066669_10754183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300019789\|Ga0137408_1114775	Not Available	578	Open in IMG/M
3300020002\|Ga0193730_1157986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300020018\|Ga0193721_1009842	All Organisms → cellular organisms → Bacteria → Acidobacteria	2507	Open in IMG/M
3300020022\|Ga0193733_1091236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300020140\|Ga0179590_1211401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300020170\|Ga0179594_10182851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	782	Open in IMG/M
3300020199\|Ga0179592_10190541	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300020579\|Ga0210407_10763408	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300020580\|Ga0210403_10589350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300020580\|Ga0210403_10629694	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300020580\|Ga0210403_10782087	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300020581\|Ga0210399_11302756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300020583\|Ga0210401_10983750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	702	Open in IMG/M
3300021168\|Ga0210406_10420020	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300021168\|Ga0210406_11317003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia → Massilia sp. 9096	519	Open in IMG/M
3300021171\|Ga0210405_10523109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300021178\|Ga0210408_10017771	All Organisms → cellular organisms → Bacteria	5721	Open in IMG/M
3300021180\|Ga0210396_11711778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300021420\|Ga0210394_10317757	All Organisms → cellular organisms → Bacteria → Acidobacteria	1367	Open in IMG/M
3300021432\|Ga0210384_10042864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4145	Open in IMG/M
3300021478\|Ga0210402_11736710	Not Available	550	Open in IMG/M
3300024288\|Ga0179589_10600917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300026277\|Ga0209350_1137954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300026298\|Ga0209236_1274141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300026310\|Ga0209239_1011960	All Organisms → cellular organisms → Bacteria → Acidobacteria	4563	Open in IMG/M
3300026371\|Ga0257179_1049648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300026481\|Ga0257155_1061738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Phaeobacter → Phaeobacter piscinae	595	Open in IMG/M
3300026514\|Ga0257168_1150617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300026532\|Ga0209160_1234040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300026551\|Ga0209648_10631384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300026557\|Ga0179587_10530144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300027645\|Ga0209117_1133127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300027655\|Ga0209388_1067999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300027655\|Ga0209388_1079973	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300027669\|Ga0208981_1054161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1022	Open in IMG/M
3300027674\|Ga0209118_1057280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1142	Open in IMG/M
3300027681\|Ga0208991_1240546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300027875\|Ga0209283_10920787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300027903\|Ga0209488_10068935	All Organisms → cellular organisms → Bacteria → Acidobacteria	2620	Open in IMG/M
3300027903\|Ga0209488_10400340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016	Open in IMG/M
3300030848\|Ga0075388_11080487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300031057\|Ga0170834_101260677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1343	Open in IMG/M
3300031231\|Ga0170824_103669331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2421	Open in IMG/M
3300031708\|Ga0310686_105131646	All Organisms → cellular organisms → Bacteria	2333	Open in IMG/M
3300031962\|Ga0307479_10070256	All Organisms → cellular organisms → Bacteria → Acidobacteria	3381	Open in IMG/M
3300031962\|Ga0307479_11434678	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300032160\|Ga0311301_10842560	All Organisms → cellular organisms → Bacteria → Acidobacteria	1249	Open in IMG/M
3300032160\|Ga0311301_11106498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300032180\|Ga0307471_100623016	All Organisms → cellular organisms → Bacteria → Acidobacteria	1239	Open in IMG/M
3300032180\|Ga0307471_101021651	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.83%
Aquatic	Environmental → Aquatic	4.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.83%
Freshwater	Environmental → Aquatic → Freshwater	4.17%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.17%
Loam	Environmental → Terrestrial → Soil → Loam	4.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.39%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	59.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.47%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	48.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.39%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001089	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12683J13190_10097851	3300001089	Forest Soil	MTSRNLVRAIAGVLLCVAGFWLALPTPYRERTFLIDAGGCRLETTIVVKQAGGAQGSVLLFHGISANKKIMSYLARGFAEQGLRVYVPD
JGI12635J15846_107508792	3300001593	Forest Soil	MKSRQAIRAVAGVLLCVAGFWLALPTPYRERTFLIDAGGCRLETTIVVKQEGGAQGSVLLFHGISANKKIMSYIARG
JGI25381J37097_10155823	3300002557	Grasslands Soil	VPTGRRLTVKSRDAIRAIAGXLLCATGLWLALPSRYRERNFLIDAGGCRLETTIVEKQEGGSQGSVLLFHGISANK
JGI25617J43924_100556051	3300002914	Grasslands Soil	MKSRQAIRALSGVLLCGAGLWLALPTPYLERTFLIDAGGCRLVTTIVEKREGGSQGSVLLFHGISANK
JGI25387J43893_10203542	3300002915	Grasslands Soil	VPTGRRLTVKSRDAIRAIAGVLLCATGLWLALPSRYRERNFLIDAGGCRLETTIVEKQEGGSQGSVLLFHGISANK
JGI25389J43894_10184822	3300002916	Grasslands Soil	MKLRQAVRAIAGVLLCAAGLWLALPAPYKERTYIFNAEGCRLETTIVEKPGTAAQGSVVLFHGISANKKIMSFMARGLAEQGLRVYV
JGI25616J43925_100454931	3300002917	Grasslands Soil	MKSRQAMRALVGILLCGLGLWLALPAPYRERTFVFDAGGCRLETTIVEKPVGGGHGSVLLFHGISANKKIMSYFARG
Ga0062389_1026430371	3300004092	Bog Forest Soil	MKSRKAIRAIAGVLLCTIGLWLALPTPYRERTYIFNADGCRLETTIVEKPAGGGKGSVLLFHGISANKKIMSYWA
Ga0066680_107492691	3300005174	Soil	MKSRQAVRAIAGVLLCAAGLWLALPTPYKERTYIFNAEGCRLETTIVEKPGTAVQGSVVLFH
Ga0066685_110358431	3300005180	Soil	MKSQQAVRAIAGVLLCAAGLWLALPAPYKERTYIFNAEGCRLETTIVEKPASATQGSVLLFHGISANKK
Ga0066671_101552381	3300005184	Soil	VPTGRRLTVKSRDAIRAIAGALLCATGLWLALPSRYRERNFLIDAGGCRLETTIVEKQEGGSQGSVLLFHGI
Ga0066676_101842191	3300005186	Soil	MKSRQAIRALAGVLLCGLGLWLAVPTPYRARTFLFDAGGCRMETTVAEKSAEVSQGSVVLFHGISANKKIMSYLARGFAEQNLRVYAPDF
Ga0066692_102712111	3300005555	Soil	MKSRQAIRALAGVLLCGLGLWLAVPTPYRARTFLFDAGGCRMETTVAEKSAEVSQGSVVLFHGISANKK
Ga0066707_107744001	3300005556	Soil	MKSRQAVRAIAGVLLCGVGLWLALPKPYKERTYIFNAEGCRLETTIVEKPNVAAQGSVVLFHGISA
Ga0066658_105359961	3300006794	Soil	MKSRQIVRAIAGVLLCAAGLWLALPTPYRERTFLIDAACCRLETTIVEKQEGGSQGSVLLFHGISANKKIMSYLAEGFAEQGL
Ga0099791_104767821	3300007255	Vadose Zone Soil	MKARNFVRALAGVLLCAAGLWLALPTPYLERTFRIDAGGCRLETTIVEKKGGGSQGSVLLFHGISANKKIM
Ga0099791_105091261	3300007255	Vadose Zone Soil	MRALAGVLLCGAGLWLALPTPYRERTFLIDAGGCRLETTIVEKSGEAAQGSVVLFHGISANKKIMSYMARGFAEQSLRLY
Ga0099793_100954541	3300007258	Vadose Zone Soil	MKSRQIVRAIAGVLLCAAGLWLALPTPYRERTFLIDAAGCRLETTIVEKQEGGSQGSVLLFHGISANKKIMSYLAEGFAEQGLRGYVPDLPGHGRTPGPFSPARAEQCGEAL
Ga0099793_106682451	3300007258	Vadose Zone Soil	MRALAGILLCGLGLWLALPAPYRERIFVFDARGCRLETTIVEKQAGAAQGSVLLFHGISANKKIMSYFARGFAEQGLRVYVPDLPGHGR
Ga0066710_1024732712	3300009012	Grasslands Soil	MKSQQAVRAIAGVLLCAAGLWLALPAPYKERTYIFNAEGCRLETTIVEKPASATQGSVLLFHGISANKKIMS
Ga0099828_101469071	3300009089	Vadose Zone Soil	MKSRQAIRALAGVLLCGLGLWLAVPTPYRERTYLVDAGGCRMETTVAEKSAEASQGSVVLFHGLSANKRIMSYLARGFAEQNLR
Ga0099828_101619831	3300009089	Vadose Zone Soil	MRSRKFIRASAGVLLCAAGMWLALPKPYRERTFLVDAGGCRLETTIVEKQAGGSQGSVLLFHGISANKKIMSYIARGFAEQGLRV
Ga0099828_109791602	3300009089	Vadose Zone Soil	MKSLQAIRAITGVLLCGAGLWLALPTPYRERTYIFNADSCRLQTTIVEKLGAATQGSVILFHGISANKKIMSYLARGFAEQRLRVFVPDLPGHGRTPGPFSGARAEQ
Ga0099828_119298931	3300009089	Vadose Zone Soil	MKSRKAVRAITGVLLCAAGLWLALPTPYRERTFLIDAGGCRLETTIVEKREGGSQGSVLLFHGISANKKIMSYLTRGFAEQGLRVYVPDLPGHGRTRGPFSPARAAQCGEA
Ga0099827_100477584	3300009090	Vadose Zone Soil	VAVMKSRQAIRALAGVLLCAAGLWLALPTPYRERTFLIDAGGCRLETTIVEKKEGGSLGSVVLLHGISAN
Ga0066709_1042707211	3300009137	Grasslands Soil	LPGKLDNWKLTDYQRRVMKSRQAMRAIAGVLLCAAGLWLALPTQYRERTYIFNADGCQLETTIYEKPAVATQGSVVLYHGISANKKIMSYLARGFAAQGLRV
Ga0099792_103149801	3300009143	Vadose Zone Soil	MKSPQGIRALAGVILCGVGVWLAVPTRYRERTFLIDAGGCRLETTIVEKQEGGSQGAALLFHGISANKKIM
Ga0099792_104764451	3300009143	Vadose Zone Soil	MRALAGVLLCGAGLWLALPTPYRERTFLIDAGGCRLETTIVEKPGGAAQGSVVLFHGISANKKIMSYFARGLAEQGL
Ga0134109_101193422	3300010320	Grasslands Soil	MKSRQAVRAIAGVLLCAAGLWLALPAPYKERTYIFNADGCRMETTIVEKPGTEAQGSVVLFHGISANKKIMAYLA
Ga0134084_103625332	3300010322	Grasslands Soil	MKSRQIVRAIAGVLLCAAGLWLALPTPYRERTFLIDAAGCRLETTIVEKQEGGSQGSVLLFHGISANKKIMSYLAHGFAEQG
Ga0134063_100362633	3300010335	Grasslands Soil	MKSRQAVRAIAGVLLCAVGLWLALPTPYKERTYIFNAGGCRLETTIVEKPNVAAQGSVVLFHGI
Ga0134063_101291701	3300010335	Grasslands Soil	MKSRQIVRAIAGVLLCAAGLWFALPTPYRERTFLIDAAGCRLETTIVEKKEGGSQGSVLLFHGISANKKIM
Ga0074044_110212441	3300010343	Bog Forest Soil	MKSRQAIRAIAGVSLCALGLWLALPTPYRERTFIFNAEGCRLETTIVEKQMGGGQGSVLLFHGISANKKIMSYLARGFASQGLRVYVPDLPGHGRTPGPFSPARAEQCGE
Ga0134066_102197491	3300010364	Grasslands Soil	MKSRQIVRAIAGVLLCAAGLWFALPTPYRERTFLIDAAGCRLETTIVEKQEGGSQGSVLLFHGISANKKIM
Ga0137392_100387211	3300011269	Vadose Zone Soil	MKSASAYRAVAGVLLCAAGAWQAIPTAYHEQIYFVNAGGCRLATTILEKPGAATQGSVVLFHGISANKKIMSYLAQGFAEQGLRVFAPDF
Ga0137393_108894192	3300011271	Vadose Zone Soil	MKSRQALRAIAGVLLCAAGLWLALPAPYRERTYIFNADGCRMETTIVEKPGVATQGSVVLFHGISANKKIMS
Ga0137389_107325112	3300012096	Vadose Zone Soil	MRALAGILLCGFGLWLALPTPYRERTYIFKAEGCRLETTIVEKQVGGGQGSVLLFHGISANK
Ga0137388_105744663	3300012189	Vadose Zone Soil	MAPARGDLAMKSVSAYRAIAGVLLCAAGAWLALPAPYHEQIYFINAGGCRLATTILEKPGAAPQGSIVLFHGIS
Ga0137382_111986882	3300012200	Vadose Zone Soil	MVKSRDAIRAIAGVLLCAMGLWLALPTRYRERTFLIDAGGCRLETTIVEKQEGGSQESVLLFHGISANKKIMSYLARGFAEQGLRVYVPDLPGHGRTAGPFSPGRAE
Ga0137363_107788461	3300012202	Vadose Zone Soil	MKSASAYRAIAGVLLCAAGACLAIPTAYHEQIYFINAGDCRLATIILEKSGAAPQGSVVLFHGISANKKIMSYLAQGFAEQG
Ga0137399_102220551	3300012203	Vadose Zone Soil	MKGQAVRALAGILLCGAGFWLAVPTPYWERSYIFNADGCRLETTIVEKQVGGGRGSVLLFHGISANKKIMAYWARGFAEQGLRVYVPDLPGHGHTPGPFSPAR
Ga0137381_117950501	3300012207	Vadose Zone Soil	MKTRKAARAITSVLLCGLGVWLALPNPYREKTYLFDAGSCQLETTVVEKQEGGSQGSVVLLHGISANKKIMSYLARGFAEQNLRVYVPDFPGHGRS
Ga0137376_117008721	3300012208	Vadose Zone Soil	MVKSRDAIRAIAGVLLCAMGLWLALPTRYRERTFLIDAGGCRLETTIVEKQEGGSQESVLLFHGISANKKIMSYLARGFAEQGLRVYVPDLPGHGRTAGPFSPGRSEQC
Ga0137379_109045261	3300012209	Vadose Zone Soil	MKSRQAIRALAGVLLCGLGLWLAVPTPYREKTYLVDAGGCRMETTVAEKSAEASQGSVVLFHGISANKKIMSYLARGFAEQNLRVY
Ga0137378_101004641	3300012210	Vadose Zone Soil	VKSRDAIRAIAGVLLCATGLWLALPTPYRERTFLIDAGGCRLETTIVEKQEGGSQGSVLLFHGISANKKIMSYLARGFAEQGLR
Ga0137377_104477701	3300012211	Vadose Zone Soil	VKSGDAIRAIAGVLLCATGLWLAKPTPYRERTYLINAGGCRLETTIVEKQEGGSQGSVLLFHGISANKEIMSYLARGFAEQGLRVYVPDLPGHGRT
Ga0137377_105061492	3300012211	Vadose Zone Soil	MKSRQAMRALVGILLCGLGLWLALPAPYRERTFVFDAGGCWLETTIVEKPVGGGHGSVLLFH
Ga0137387_100441076	3300012349	Vadose Zone Soil	MKSRQGIRALAGVILCGVGLWLALPAPYKERTYIFNAEGCRLETTIVEKPFSAVQGSFVLFHGISAYKKIM
Ga0137387_100802662	3300012349	Vadose Zone Soil	MKSRQAIQALAGVLLCAAGLWLALTTTYRERTLQIDAGGCPLETTIVEKREEGSVGSVVLLHGISANKKIMSYIA
Ga0137387_107611382	3300012349	Vadose Zone Soil	MKSRDAIRAIAGVLLCATGLWLALPTPYRERTFLIDAGGCRLETTIVEKQEGGSQGSVLLFHGISANKKIMSYLARGFAEQGLRVY
Ga0137386_100564686	3300012351	Vadose Zone Soil	MKSRKAIRAVAGVLLCAVGLWLAVPMPYRERTFLFDAGGCRLETTIVEKQGGGAQGSVLLFHGISANK
Ga0137385_101956051	3300012359	Vadose Zone Soil	MKSRKAIRAVAGVLLCAVGLWLAVAMPERQQTLMFEAGGGGLEATIVEKQGCGTKKKVLLFLGISANKKIMAYHARGFAEQGLRVYVPD
Ga0137385_103921942	3300012359	Vadose Zone Soil	MKSRQAIRALAGILLCATGFWLAVPTPYRARTFLFDAGGCRMETTVAEKSAEASQGSVVLFHGIS
Ga0137360_101084572	3300012361	Vadose Zone Soil	MKSRQAIRALAGVLLCAAGLWLALPTPYRERTFLIDAGGCRLETTIVEKREGGSVGSVLLFHGI*
Ga0137360_102209742	3300012361	Vadose Zone Soil	MKSRQGIRALAGVILCGVGVWLAVPTRYRERTFLIDAGGCRLETTIVEKQEGGSQGAALLFNGISANKKIMSYLARGFA
Ga0137360_103006182	3300012361	Vadose Zone Soil	MRALAGILLCGFGLWLALPTPYRERTYIFKAEGCRLETTIVEKQVGGAQGSVLLFQGISANKKIMLYFARGFAEQGLRVYVPDLPGHGRT
Ga0137360_109127352	3300012361	Vadose Zone Soil	MKSRQAIRALAGVLLCATGLWLALPTPYRERTFLIDASGCRLETTIVEKQVGSGQGSVLLFHGISANKKIMLYFARGFAEQGLRVYVPDLP
Ga0137360_115243682	3300012361	Vadose Zone Soil	MKSRQTLRAITGVLLCGAGLWLALPKPYRERTYIFGASGCRLETTIVEKPGGAAQGSVVLFHGISA
Ga0137361_112246461	3300012362	Vadose Zone Soil	MKSRQEVRAIAGAVLCAGGLWLALATPYRERTYIFNADGCRLETTIVEKQAGGGQGSVLLFHGISANKKIMSYFARGFAEQGLRVYVPDLPGHGRTPGPFSP
Ga0137361_114291972	3300012362	Vadose Zone Soil	MKSRQAIRALAGVLLCAAGLWLALPTPYRERTFLIDAGGCRLETTIVEKREGGSVGSVLLFHGISANKKIMSYIARGFAEQGLRVYVPDLPGHGRTPGPF
Ga0137390_108279632	3300012363	Vadose Zone Soil	MKSRQIVHAIAGVLLCAAGLWLALPKPYRERTFLIDAAGCRLETTIVEKQEGGSQGSVLLFHGISANK
Ga0137390_115878182	3300012363	Vadose Zone Soil	MKSRQAIRAVTGILLCGMGLWLARPTPYRERTFLFDAGGCRMETATVEKQGGGSQGSVLLFHGISANK
Ga0137398_103927532	3300012683	Vadose Zone Soil	MKSRQALRAIAGVLLCAAGLWLALPAPYRERTYIFNADGCRVETTIVEKPGAATRGSIVLFHGISANKKIMSYLARGFAEQGLHVYVPDLPRHGR
Ga0137397_100100375	3300012685	Vadose Zone Soil	MKSRQALRAIAGVLLCAAGLWLALPAPYRERTYIFNADGCRMETTIVEKSGAATQGSVVLFHGISANKKIMSYLARGLAEQGLRVYVPDLPG
Ga0137396_107444331	3300012918	Vadose Zone Soil	MKSGKAIRAIVGILLCAAGLWLALPTPYKERTYIFNAEGCRLETMLVEKPGAAAQGSVVLFHGISANKKIMSYLARGFA*
Ga0137394_107080591	3300012922	Vadose Zone Soil	MKSASAYRAIAGVLLCAAGAWLAIPTAYHEQIYFINAGGCRLATTVLEKSGGAKEGSVVLFHGISANKKIMSYLAQGFAEQG
Ga0137413_101641101	3300012924	Vadose Zone Soil	MKSRQIVRAIAGVLLCAAGLWLALPTPYRERTFLIDAAGCRLETTIVEKQEGGSQGSVLLFHGISANKKIMSYLAAGFAEQGLRGYVPDLPGHGRTPGPFSPARAEQCGEALLRELLARGMIDP
Ga0137419_100289114	3300012925	Vadose Zone Soil	MTSRNLVRAIAGVLLCVAGFWLALPTPYRERTFLIDAEGCRLETTIVVKQAGGAQGSVLLFHGISANKKIMSYLARGF
Ga0137419_111202762	3300012925	Vadose Zone Soil	MTSRNFVRAIAGVLLCAAGLWLALPTPYRERTFLIDAGGCRLETTIVEKQAGGAQGSVLLFHGISANKKIMSYLARGFAEQGLRVYVPDLS
Ga0137419_111435122	3300012925	Vadose Zone Soil	MKGQAVRALAGILLCGAGFWLAVPTPYWERSYIFNADGCRLETTIVEKQVGGGRGSVLLFHGISANKKIMAYWA
Ga0137419_117234161	3300012925	Vadose Zone Soil	MKSRQAIRALSGVLLCGAGLWFALPTPYRERTFIFDAGGCRLETTILEKKVGSGLGSVLLFHGISANKKIMSYVARGFAEQGLRVYVPNSPGHGRTAGPFSPARAQQCG
Ga0137416_100061101	3300012927	Vadose Zone Soil	MKGQAVRALAGILLCGAGFWLAVPTPYWERSYIFNADGCRLETTIVEKQVGGGRGSVLLFHGISANKKIMAYWARGFAEQGLRVYVPDL
Ga0137416_101148271	3300012927	Vadose Zone Soil	MPDKLANRRLTDYGRRTMKSRRVIRAVAGVLLCVAGFWLALPTPYRERTFLIDAGGCRLETTIVVKQAGGAQGSVLLFHGISA
Ga0137416_112540742	3300012927	Vadose Zone Soil	MKSASAYRAIAGVLLCAAGAWLAIPTAYHEQIYFINAGGCRLATTVLEKSGGAKEGSVVLFHGISANKKIMSYLAQGFA
Ga0137416_112622002	3300012927	Vadose Zone Soil	MKSRQAMRALAGILLCGLGLWLALPAPYRERTFVFDAGGCRLETTIVEKQAGAAQGSVLLFHGISANKKIMSY
Ga0137416_114915942	3300012927	Vadose Zone Soil	MKARNFVRALAGVLLCAAGLWLALPTPYLERTFRIDAGGCRLETSFVEKKGGGSQGSVLLFHGISANKKIMSYFA
Ga0137407_118760072	3300012930	Vadose Zone Soil	MKSPQIVRVIAGVLLSAAGLWLALPTPYRERTFLIDAAGCRLETTIVEKQEGGSQGSVLLFHGISANKKIMSYLARGFAGQGLRVYVPDLP
Ga0134077_100230413	3300012972	Grasslands Soil	MKSGKAIRGIAGVLLCAGGLWLALPTPYKEQTYIFNADGCRLETTMVEKPGATVQGSVVLFHGISANKKIMSYLARGFA
Ga0134081_102789331	3300014150	Grasslands Soil	MKSRQAVRAIAGVLLCAVGLWLALPTPYKERTYIFNAGGCRLETTIVEKPNVAAQGSVVLFHGISANRKIMSFVARG
Ga0134078_104234921	3300014157	Grasslands Soil	MKSRQAVRAIAGVLLCAAGLWLALPAPYKERTYIFNADGCRMETTIVEKPGTEAQGSVVLFHGISANKKIMAYIARGF
Ga0137414_11304102	3300015051	Vadose Zone Soil	MDHRKLTDYQRRVMKSRQAMRAIAGVLLCAAGLWLALPTPYRERTYIFNAEGCRLETTIYEKPGTAT
Ga0137414_11719841	3300015051	Vadose Zone Soil	MRALAGILLCGFGLWLALPTPYRERTYIFKAEGCRLETTIVEKQVGGGQGSVLLFQGISANKKIMLYFARGFAEQGLRVYVPDLPGHGRTPGRSLPRVRSSAAKRFSANYWRAE*
Ga0137420_10421197	3300015054	Vadose Zone Soil	MRALAGILLCGLGLWLALPAPYRERTFVFDAGGCRLETTIVEKQAGAAQGSVLLFHGISANKKIMSYLAR
Ga0137420_13420812	3300015054	Vadose Zone Soil	MKSRQAVRALAGVLLCGAGLWLALPTPYRERTFLIDAGGCRLETTIVEKSGEAAQGSVVLFH
Ga0137412_101827561	3300015242	Vadose Zone Soil	MKSRQAMRVLAGILLCGFGLWLALPTPYRERTYIFKAEGCRLETTIVEKQIGGGQGSVLLFHGISANKKIMLYFARGFAEQGLRVYVPDLPG
Ga0134073_101831062	3300015356	Grasslands Soil	MKSGKAIRGIAGVLLCAGGLWLALPTPYKEQTYIFNADGCRLETTMEEKPGATVQGSVVLFHGISAN
Ga0187802_100362313	3300017822	Freshwater Sediment	MKHGKAARAIAGVLLLAGGYWLAVPSPYKERRYLLDAGGCKMETDVVEPRTKGTQGSVVLFHGISANKKVMAYLARGFAEAGLRVYT
Ga0187821_102878641	3300017936	Freshwater Sediment	MRSRKAVRAIASLLLCGVGVWLALPNPYREKTYIINTGSCQLETTVVEKAEGGSQGTVVLFHGISANKKIMSYLARGFAEQHL
Ga0187817_102411713	3300017955	Freshwater Sediment	MKHGKAARAIAGVLLLAGGYWLAVPSPYKERRYLLDAGGCKMETDVVEPRTKGTQGSVVLFHGISANKKVMAYLARGFAEAGLRVYTPDFPGHGHT
Ga0187816_100079143	3300017995	Freshwater Sediment	MKHGKTARAIAGIVLIAGGYWLAVPSPYKERRYLIDAGGCRMETDVIEPRTGGTQGSVVLFHGISANKKIMAYVARGFAEEGLRVYVPDFPGHGHT
Ga0187810_103879721	3300018012	Freshwater Sediment	MKHGKTARAIAGIVLIAGGYWLAVPSPYKERRYLIDAGGCRVETDVIEPRTGGTQGSVVLFHGISANKKIMAYVARGFAEAGLRVYVPD
Ga0187773_108303481	3300018064	Tropical Peatland	MIASIALCGLGAWLALPNPYREKTYLIDAGTCRLEMTVVEKRTGGTQGSAVLFHGLSANKKIMSYLARGFAEQNLRVFVPDFPGHGHSPGPFSAERAE
Ga0066667_109734281	3300018433	Grasslands Soil	MKSRQIVRAIAGVLLCAAGLWLALPTPYRERTCLIDAAGCRLETTIVEKQEGGSQGSVLLFHGISANKKIMSYLAEGFVEQGLRV
Ga0066669_107541832	3300018482	Grasslands Soil	VPTGRRLTVKSRDAIRAIAGVLLCATGLWLALPTPYRERTFLVDAGGCRLETTIVEKQEGGSQGSVLLFHGISANKKIMSYLARGFAEQGLRVY
Ga0137408_11147752	3300019789	Vadose Zone Soil	MKSVSAYRAIAGVLLCAAGAWLAIPAPYHEQIYFINAGGCRLATTILEKPGAAPQGSVVLFHGISAN
Ga0193730_11579862	3300020002	Soil	MKSRQIVRAIAGVLLCAAGLWLALPKPYRERTFLIDAAGCRLETAIVEKQEGGSQGSVLLFHGISANKKIMSYLAEGFAEQGLRGYVPDLPGHGRTPGPFSPARAEQCGE
Ga0193721_10098421	3300020018	Soil	MKSRQIVRAIAGVLLCAAGLWFALPTPYRERTFLIDAAGCRLETTIVEKQEGGSQGSVLLFHGISANKKIMSYLAEGFAEQGLRVYVPDLPGH
Ga0193733_10912361	3300020022	Soil	LCATGLWLALPTPYRERTFLMDAGGCRLETTMVEKQEGGSQGSVLLFHGISANKKIMSYLARGFAEQ
Ga0179590_12114011	3300020140	Vadose Zone Soil	MSDKLTNRKLMHCQWRVMKSRQEVRAIAGAVLCAGGLWLALATPYRERTYIFNADGCRLETTIVEKQAGGGQGSVLLFHGISANKKIMSYFARGFAEQGLRVYV
Ga0179594_101828511	3300020170	Vadose Zone Soil	MKSRQAMRVLAGILLCGFGLWLALPTPYRERTYIFKAEGCRLETTIVEKQIGGGQGSVLLFHGISANKKIMLYFARGFAEQGLRVYVPDLPGHGRTPGRFSP
Ga0179592_101905411	3300020199	Vadose Zone Soil	MTSRNLVRAIAGVLLCVAGFWLALPTPYRERTFLIDAGGCRLETTIVVKQAGGAQGSVLLFHGISANKKIMSYLARGFAEQGLRVYVPDLPGHGR
Ga0210407_107634082	3300020579	Soil	MKSRKTIRAVAGVLLCGGGLWLALRPPYREQTYIINAGGCRMETVIVEPANGVAHGSMVLFHGISANRKIMSYLARGFAEQGLRVYVPDLPGHGRTAGPF
Ga0210403_105893501	3300020580	Soil	VGLWLALPTPYRERTYIFNANGCRLETTIVEKQAGGGQGSVLLFHGISANKKIMSYFARGFAEQGLRVYVPDLP
Ga0210403_106296941	3300020580	Soil	MKSRGAIRAVAGVLLCAVGFWLALPTPYRERTYIFNADGCRLETTIVEKQAGGGQGSVLLFHGISANKKVMSYLARGFAVQGLRVYVPDLPGHGRTAGPF
Ga0210403_107820872	3300020580	Soil	MKSRKTIRAVAGVLLCGGGLWLALRPPYREQTYIINAGGCRMETVIVEPANGVAHGSMVLFHGISA
Ga0210399_113027561	3300020581	Soil	MKSRKAMRAVAGVLLCAAGLWLALPTPYRERTYIFNADGCRLETTIVEKPVSGGHGSVLLFHGMSA
Ga0210401_109837501	3300020583	Soil	MKSRKFIRASAGVLLCAAGFWLAVPTPYRERNFLIDAAGCRLATTIVERREGGSEGSVLLFHGISANKKIMSYLARGFAEQGLRVY
Ga0210406_104200202	3300021168	Soil	MKSRQTIRAVAGVLLCAAGLWLALPTPYRERTYIFNAEGCRLETTIVENLVGGGRGSVLLFHG
Ga0210406_113170031	3300021168	Soil	MKSRQAIRAVAGVLLCGGGLWLALPTPYREQTYIINAGGCRMETVIVEPANGVAHGSMVLFHGISANRKIMSYLAHGFAEQGLRVYVPDLPGHGRTPGPFSPARAEQ
Ga0210405_105231092	3300021171	Soil	VGPRPAMKSRKTLRAIAAILFCASGFWLAIPTPYRERTYLIDANGCRMETAVVESPTGGTQGSVVLFHGISANKKIMSYMARGFAAAGLRVYAPDFPG
Ga0210408_100177711	3300021178	Soil	MKSRQAIRAIAGVLLCGGGLWLALPSPYREQTYIINACGCRMETVIVEKPGGVVQGSMVLFH
Ga0210396_117117781	3300021180	Soil	MKSRKFIRASAGVLLCAAGFWLAVPTPYRERNFLIDAAGCRLATTIVERREGGSEGSVLLFHGISANKKIMSYLARGFA
Ga0210394_103177573	3300021420	Soil	MKSRKALRALAAILFCASGFWLAIPTPYRERTYLIDANGCRMETAVVESPTGGTQGSVVLFHGISANKKIMSYMARGFAAAGLRVYVPDFPGHG
Ga0210384_100428641	3300021432	Soil	MKSRKTIRAVAGVLLCGGGLWLALRPPYREQTYIINAGGCRMETVIVEPANGVAHGSMVLFHGISANRKIMSYLARGFAE
Ga0210402_117367101	3300021478	Soil	MNHWNAARAIACVLLCAGGAWLAVPTPYREENYIIHAGGCQLETTIVEKPERATNGSVVLFHGIS
Ga0179589_106009171	3300024288	Vadose Zone Soil	MSDKLTNRKLMHCQWRVMKSRQEVRAIAGAVLCAGGLWLALATPYRERTYIFNADGCRLETTIVEKQAGGGQGSVLLFHGISANKKIMSYFARGFAEQGLRVY
Ga0209350_11379542	3300026277	Grasslands Soil	VPTGRRLTVKSRDAIRAIAGALLCATGLWLALPSRYRERNFLIDAGGCRLETTIVEKQEGGSQGSVLLFHGISANKKIMSYLAR
Ga0209236_12741412	3300026298	Grasslands Soil	MKSPQIVRAIAGVLLSAAGLWLAHPTPYRERTFLIDAGGCRLETTIVEKQVGGAQGSVLLFHGISANKKIMSYLARGFAGQGLRVYVPDLPGHGRT
Ga0209239_10119605	3300026310	Grasslands Soil	VPTGRRLTVKSRDAIRAIAGALLCATGLWLALPSRYRERNFLIDAGGCRLETTIVEKQEGGSQGSVLLFHGISANKKIMSYLARGFAEQGLRV
Ga0257179_10496482	3300026371	Soil	MKSRNFVRAIGGVLLCGAGMWLAVPTPYREHAFLIDAGGCRLETTIVEKQGGGSQGSVLLFHGISANKKIMSYLARGFAEQGL
Ga0257155_10617381	3300026481	Soil	MKSRQAMRALAGILLCGLGLWLALPTPYRERTYIFKAEGCRLETTIVEKQIGGGQGSVLLFHGISANKKIMLYFARGFAEQGLRVYVPDLPGHGRTPGPFS
Ga0257168_11506171	3300026514	Soil	MKSVSAYRAIAGVLLCAAGAWLAIPAPYHEQIYFINAGGCRLATTILEKPGGAAQGSVVLFHGISANKKIMT
Ga0209160_12340401	3300026532	Soil	MKSGKAIRGIAGVLLCAGGLWLALPTPYKEQTYIFNADGCRLETTMVEKPGATVQGSVVLFHGISANKKIMSYLARGFAEQGMRVFVPDL
Ga0209648_106313841	3300026551	Grasslands Soil	MKSRQAMRALAGILLCGLGLWLALPAPYRERTFVFDAGGCRLETTIVERQAGAAQGSVLLFHGISANKKIMSYLARGFAEQGLRVYVPDLPGH
Ga0179587_105301441	3300026557	Vadose Zone Soil	MRALAGVLLCGAGLWLALPTSYRERTFLIDAGGCRLVTTIVEKQEGGSQGSVLLFHGISANKKIMSYLARRFAEQF
Ga0209117_11331271	3300027645	Forest Soil	MKSRQAIRAVAGVLLCVAGFWLALPTPYRERTFLIDAGGCRLETTIVVKQEGGAQGSVLLFHGISANK
Ga0209388_10679993	3300027655	Vadose Zone Soil	MKSASAYRAIAGVLLCAAGAWLAIPTAYHEQIYFINAGGCRLATTVLEKSGGAKEGSVVLFHGISANKKIMSYLAQGFAEQGL
Ga0209388_10799731	3300027655	Vadose Zone Soil	MKSRQAMRALAGILLCGLGLWLALPAPYRERIFVFDARGCRLETTIVEKQAGAAQGSVLLFHGISAN
Ga0208981_10541611	3300027669	Forest Soil	MKSPQIVRAIAGVLLSAAGLWLALPTPYRERTFLIDAGGCRLETTIVEKQVGGSQGSVLLFHGISANKKIMSYLARGFAGPEIHDDGSGRQGVAGR
Ga0209118_10572803	3300027674	Forest Soil	MRSSQAIRAVTGVLLCTAGLWLALPTPYRERTFLIDAGGCRLETTIVEKQGGGSQGSVLLFHGISANKKIMSYLARGFAEQGLRVYVP
Ga0208991_12405461	3300027681	Forest Soil	MKSVSAYRAIAGVLLCAAGAWLAIPTAYHEQIYFINAGGCRLATTVLEKSGGAKEGSVVLFHGISANKRIMNYLAQGFA
Ga0209283_109207872	3300027875	Vadose Zone Soil	MKSLQAIRAITGVLLCGAGLWLALPTPYRERTYIFNADSCRLQTTIVEKLGAATQGSVILFHGISANKKIMSYLARGFA
Ga0209488_100689353	3300027903	Vadose Zone Soil	MRALAGVLLCGAGLWLALPTPYRERTFLIDAGGCRLVTTIVEKQEGGSQGSVLLFHGIS
Ga0209488_104003403	3300027903	Vadose Zone Soil	MKSRQALRAIAGVLLCAAGLWLALPAPYRERTYIFNADGCRMETTIVEKPGVATQGSVVLFHGIS
Ga0075388_110804872	3300030848	Soil	LPDKLANRKLTDYWRQAMKSRQALRAVAGVLLCGVGLWLALPTPYRERTYIFNADGCRLETTIVEKQAGGGQGS
Ga0170834_1012606772	3300031057	Forest Soil	MKSRQALRAVAGVLLCGVGLWLALPTPYRERTYIFNADGCRLETTIVEKKAGGGQGSVLLFHGISANKK
Ga0170824_1036693311	3300031231	Forest Soil	LPDKLANRKLTDYWRQAMKSRQALRAVAGVLLCGVGLWLALPTPYRERTYIFNADGCRLETTIVEKKAGGGQGSVLLFHGISANKK
Ga0310686_1051316463	3300031708	Soil	MKSLGAIRAITGVLLCGGGLWLALASPYRERNYIINAEGCRVETTIVEAASAAAHGSMVLFHGISANRK
Ga0307479_100702563	3300031962	Hardwood Forest Soil	MKLGKAIRAIVGILLCAAGLWLALPTPYKERTYIFNAEGCRLETTLVEKPGAAAQGSVVLFH
Ga0307479_114346781	3300031962	Hardwood Forest Soil	MKSRQAIRAVAGVLLCGLGLWLALPTAYRERTFLIDAGGCRLETTIVEKPGAAAQGAVVLFHGISAN
Ga0311301_108425601	3300032160	Peatlands Soil	MAGGYWLAVPTPYKEKRYLVEAGGCRMETDVVERQPGNAQGSVVLFHGISANKKIMAYLARGFA
Ga0311301_111064981	3300032160	Peatlands Soil	MKSRQALRAIAGVLLCGVGLWLALPTPYRERTYIFNADGCRLETTIVEKQAGGGLGAVLLFHGISANKK
Ga0307471_1006230163	3300032180	Hardwood Forest Soil	MKGGKTVRAIAGLLLIAGGYWLAVPTPYKEQRLLIDAGGCRMETDIVAKRSGDAQGSAVLFHGISANKKIMSYLARGFAEAGLRVYASDFPGHGHTPGPFSPACE
Ga0307471_1010216511	3300032180	Hardwood Forest Soil	MKSRQAVRALAGVLLCGAGLWLALPTAYRQRTFLIDAGGCRLETTIVEKPGGAAQGSVVLFHGISANKKIMSYFARGF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051025

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences