Metagenome / Metatranscriptome Family F050965

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050965
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	72 residues
Representative Sequence	TVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Number of Associated Samples	95
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.17 %
% of genes near scaffold ends (potentially truncated)	97.92 %
% of genes from short scaffolds (< 2000 bps)	85.42 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.722 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.694 % of family members)
Environment Ontology (ENVO)	Unclassified (50.694 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.917 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 38.78% Coil/Unstructured: 61.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF03720	UDPG_MGDP_dh_C	6.94
PF07282	OrfB_Zn_ribbon	4.17
PF00589	Phage_integrase	3.47
PF03721	UDPG_MGDP_dh_N	3.47
PF02563	Poly_export	2.08
PF00872	Transposase_mut	2.08
PF00149	Metallophos	1.39
PF01050	MannoseP_isomer	1.39
PF14659	Phage_int_SAM_3	0.69
PF13356	Arm-DNA-bind_3	0.69
PF12307	DUF3631	0.69
PF05930	Phage_AlpA	0.69
PF09992	NAGPA	0.69
PF10531	SLBB	0.69
PF01527	HTH_Tnp_1	0.69
PF13011	LZ_Tnp_IS481	0.69
PF05598	DUF772	0.69
PF13683	rve_3	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	3.47
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	3.47
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	3.47
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	3.47
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	3.47
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	2.08
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	2.08
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.72 %
All Organisms	root	All Organisms	40.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.72 %
cellular organisms	root	All Organisms → cellular organisms	40.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.25 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.44 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.25 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.78 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.69 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.72 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.69 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.69 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.78 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	1.39 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.69 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.78 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.08 %
unclassified Rhodopseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas	1.39 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.69 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.78 %
Rhodopseudomonas sp. B29	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp. B29	1.39 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.69 %
Bradyrhizobium sp. Cp5.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Cp5.3	0.69 %
Bradyrhizobium sp. 200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	0.69 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.69 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_103861517	Not Available	1049	Open in IMG/M
3300005187\|Ga0066675_10910103	Not Available	664	Open in IMG/M
3300005332\|Ga0066388_102357853	Not Available	964	Open in IMG/M
3300005445\|Ga0070708_100445470	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300005518\|Ga0070699_101796272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp. B29	561	Open in IMG/M
3300005562\|Ga0058697_10829718	Not Available	502	Open in IMG/M
3300005764\|Ga0066903_101595009	Not Available	1237	Open in IMG/M
3300005764\|Ga0066903_101703514	Not Available	1200	Open in IMG/M
3300005764\|Ga0066903_101838645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	1158	Open in IMG/M
3300005764\|Ga0066903_102374476	Not Available	1025	Open in IMG/M
3300005764\|Ga0066903_102859091	All Organisms → cellular organisms → Bacteria → Proteobacteria	936	Open in IMG/M
3300005764\|Ga0066903_104962276	Not Available	706	Open in IMG/M
3300005764\|Ga0066903_105737810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Cp5.3	652	Open in IMG/M
3300005764\|Ga0066903_107727188	Not Available	553	Open in IMG/M
3300006028\|Ga0070717_10022994	All Organisms → cellular organisms → Bacteria → Proteobacteria	4932	Open in IMG/M
3300006028\|Ga0070717_11697953	Not Available	571	Open in IMG/M
3300006845\|Ga0075421_101997748	Not Available	618	Open in IMG/M
3300007265\|Ga0099794_10055947	Not Available	1908	Open in IMG/M
3300009100\|Ga0075418_11501851	Not Available	731	Open in IMG/M
3300009100\|Ga0075418_11836189	Not Available	659	Open in IMG/M
3300009143\|Ga0099792_11161447	Not Available	522	Open in IMG/M
3300009147\|Ga0114129_12042840	Not Available	692	Open in IMG/M
3300009162\|Ga0075423_11121599	Not Available	838	Open in IMG/M
3300010046\|Ga0126384_10186378	Not Available	1631	Open in IMG/M
3300010048\|Ga0126373_12288769	Not Available	601	Open in IMG/M
3300010358\|Ga0126370_10114297	All Organisms → cellular organisms → Bacteria → Proteobacteria	1899	Open in IMG/M
3300010360\|Ga0126372_12050031	Not Available	619	Open in IMG/M
3300010360\|Ga0126372_12774243	Not Available	542	Open in IMG/M
3300010360\|Ga0126372_12885578	Not Available	533	Open in IMG/M
3300010366\|Ga0126379_11030847	Not Available	928	Open in IMG/M
3300010366\|Ga0126379_11186428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	870	Open in IMG/M
3300010376\|Ga0126381_101858705	Not Available	869	Open in IMG/M
3300010376\|Ga0126381_102355203	Not Available	764	Open in IMG/M
3300010398\|Ga0126383_11397610	Not Available	790	Open in IMG/M
3300010868\|Ga0124844_1262922	Not Available	600	Open in IMG/M
3300011269\|Ga0137392_11487021	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300012198\|Ga0137364_11266988	Not Available	550	Open in IMG/M
3300012205\|Ga0137362_10168095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp. B29	1881	Open in IMG/M
3300012211\|Ga0137377_11602247	Not Available	575	Open in IMG/M
3300012212\|Ga0150985_106995062	Not Available	614	Open in IMG/M
3300012212\|Ga0150985_118013785	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300012351\|Ga0137386_11173608	Not Available	539	Open in IMG/M
3300012353\|Ga0137367_10826100	Not Available	642	Open in IMG/M
3300012362\|Ga0137361_10691309	Not Available	932	Open in IMG/M
3300012927\|Ga0137416_10736790	Not Available	868	Open in IMG/M
3300012930\|Ga0137407_10461746	Not Available	1182	Open in IMG/M
3300012939\|Ga0162650_100001652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2175	Open in IMG/M
3300012948\|Ga0126375_10453217	Not Available	943	Open in IMG/M
3300012958\|Ga0164299_11214847	Not Available	571	Open in IMG/M
3300012971\|Ga0126369_10301241	Not Available	1604	Open in IMG/M
3300012971\|Ga0126369_10345987	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300012971\|Ga0126369_10876853	Not Available	982	Open in IMG/M
3300012971\|Ga0126369_13238703	Not Available	533	Open in IMG/M
3300016294\|Ga0182041_12099833	Not Available	527	Open in IMG/M
3300016319\|Ga0182033_10101927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2113	Open in IMG/M
3300016319\|Ga0182033_11095864	Not Available	711	Open in IMG/M
3300016319\|Ga0182033_12158816	Not Available	508	Open in IMG/M
3300016357\|Ga0182032_10094654	Not Available	2092	Open in IMG/M
3300016357\|Ga0182032_10230709	Not Available	1428	Open in IMG/M
3300016357\|Ga0182032_11337007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	619	Open in IMG/M
3300016371\|Ga0182034_10063846	All Organisms → cellular organisms → Bacteria	2495	Open in IMG/M
3300016371\|Ga0182034_10263796	Not Available	1365	Open in IMG/M
3300016371\|Ga0182034_10564234	Not Available	957	Open in IMG/M
3300016371\|Ga0182034_10888201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	766	Open in IMG/M
3300016371\|Ga0182034_11383974	Not Available	615	Open in IMG/M
3300016387\|Ga0182040_10124874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1792	Open in IMG/M
3300016404\|Ga0182037_10542697	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	980	Open in IMG/M
3300016404\|Ga0182037_10761934	Not Available	832	Open in IMG/M
3300016404\|Ga0182037_11056346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300016445\|Ga0182038_11227787	Not Available	669	Open in IMG/M
3300018051\|Ga0184620_10039136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1286	Open in IMG/M
3300018476\|Ga0190274_11938513	Not Available	685	Open in IMG/M
3300021361\|Ga0213872_10383204	Not Available	572	Open in IMG/M
3300021439\|Ga0213879_10166032	Not Available	646	Open in IMG/M
3300021560\|Ga0126371_10106610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2801	Open in IMG/M
3300021560\|Ga0126371_11987552	Not Available	699	Open in IMG/M
3300025898\|Ga0207692_10249501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1063	Open in IMG/M
3300025906\|Ga0207699_10068579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2160	Open in IMG/M
3300025910\|Ga0207684_10619598	Not Available	923	Open in IMG/M
3300025916\|Ga0207663_10170685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1545	Open in IMG/M
3300027903\|Ga0209488_10287341	Not Available	1229	Open in IMG/M
3300028536\|Ga0137415_10512303	Not Available	1008	Open in IMG/M
3300028587\|Ga0247828_11095562	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300028878\|Ga0307278_10351369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	650	Open in IMG/M
3300030988\|Ga0308183_1028667	Not Available	1006	Open in IMG/M
3300031421\|Ga0308194_10040059	Not Available	1151	Open in IMG/M
3300031421\|Ga0308194_10254718	Not Available	590	Open in IMG/M
3300031573\|Ga0310915_10867018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300031573\|Ga0310915_11144601	Not Available	539	Open in IMG/M
3300031679\|Ga0318561_10256373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	954	Open in IMG/M
3300031679\|Ga0318561_10731035	Not Available	544	Open in IMG/M
3300031680\|Ga0318574_10599170	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300031681\|Ga0318572_10850101	Not Available	542	Open in IMG/M
3300031719\|Ga0306917_10030092	All Organisms → cellular organisms → Bacteria → Proteobacteria	3475	Open in IMG/M
3300031719\|Ga0306917_11133365	Not Available	608	Open in IMG/M
3300031719\|Ga0306917_11376188	Not Available	545	Open in IMG/M
3300031724\|Ga0318500_10173977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1022	Open in IMG/M
3300031744\|Ga0306918_11544990	Not Available	506	Open in IMG/M
3300031747\|Ga0318502_10258055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1019	Open in IMG/M
3300031748\|Ga0318492_10810010	Not Available	504	Open in IMG/M
3300031768\|Ga0318509_10832103	Not Available	510	Open in IMG/M
3300031770\|Ga0318521_10084659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1718	Open in IMG/M
3300031771\|Ga0318546_10055775	All Organisms → cellular organisms → Bacteria → Proteobacteria	2476	Open in IMG/M
3300031771\|Ga0318546_10854541	Not Available	640	Open in IMG/M
3300031778\|Ga0318498_10261160	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300031797\|Ga0318550_10241356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	876	Open in IMG/M
3300031833\|Ga0310917_10069910	All Organisms → cellular organisms → Bacteria → Proteobacteria	2200	Open in IMG/M
3300031833\|Ga0310917_10641307	Not Available	720	Open in IMG/M
3300031833\|Ga0310917_10657610	Not Available	710	Open in IMG/M
3300031833\|Ga0310917_11006531	Not Available	558	Open in IMG/M
3300031845\|Ga0318511_10477116	Not Available	576	Open in IMG/M
3300031879\|Ga0306919_10290648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1238	Open in IMG/M
3300031890\|Ga0306925_10007123	All Organisms → cellular organisms → Bacteria → Proteobacteria	10478	Open in IMG/M
3300031890\|Ga0306925_10114899	All Organisms → cellular organisms → Bacteria	2876	Open in IMG/M
3300031890\|Ga0306925_10660016	Not Available	1098	Open in IMG/M
3300031893\|Ga0318536_10656450	Not Available	523	Open in IMG/M
3300031897\|Ga0318520_10819915	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031910\|Ga0306923_10052109	All Organisms → cellular organisms → Bacteria → Proteobacteria	4519	Open in IMG/M
3300031910\|Ga0306923_10456914	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300031910\|Ga0306923_10743384	Not Available	1088	Open in IMG/M
3300031912\|Ga0306921_10133188	All Organisms → cellular organisms → Bacteria → Proteobacteria	2901	Open in IMG/M
3300031942\|Ga0310916_10090326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2441	Open in IMG/M
3300031946\|Ga0310910_10010110	All Organisms → cellular organisms → Bacteria → Proteobacteria	5863	Open in IMG/M
3300031946\|Ga0310910_10992237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300031946\|Ga0310910_11242285	Not Available	577	Open in IMG/M
3300031947\|Ga0310909_10546743	Not Available	969	Open in IMG/M
3300031947\|Ga0310909_10989268	Not Available	687	Open in IMG/M
3300031954\|Ga0306926_13008579	Not Available	503	Open in IMG/M
3300032001\|Ga0306922_10109505	All Organisms → cellular organisms → Bacteria → Proteobacteria	2929	Open in IMG/M
3300032001\|Ga0306922_11045149	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300032001\|Ga0306922_11640278	Not Available	638	Open in IMG/M
3300032043\|Ga0318556_10766513	Not Available	502	Open in IMG/M
3300032059\|Ga0318533_10824004	Not Available	681	Open in IMG/M
3300032060\|Ga0318505_10456887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300032065\|Ga0318513_10512453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300032076\|Ga0306924_10139643	All Organisms → cellular organisms → Bacteria → Proteobacteria	2769	Open in IMG/M
3300032094\|Ga0318540_10613112	Not Available	524	Open in IMG/M
3300032261\|Ga0306920_100316865	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300032261\|Ga0306920_102686975	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300033289\|Ga0310914_10091176	Not Available	2604	Open in IMG/M
3300033289\|Ga0310914_10130621	All Organisms → cellular organisms → Bacteria	2196	Open in IMG/M
3300033290\|Ga0318519_10384807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	834	Open in IMG/M
3300033290\|Ga0318519_11068009	Not Available	503	Open in IMG/M
3300033551\|Ga0247830_10747981	All Organisms → cellular organisms → Bacteria → Proteobacteria	777	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.75%
Host-Associated	Host-Associated	6.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.06%
Plants	Host-Associated → Plants	6.25%
Aquatic	Environmental → Aquatic	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.39%
Sediment	Environmental → Aquatic → Sediment	0.69%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.69%
Phylloplane	Host-Associated → Plants → Phylloplane	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.86%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.39%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.39%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.39%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.69%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.69%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1038615171	3300000955	Soil	HVPWQNIVLGVEANYYNINGFDHSLVDNFGVPVQFSNTSAPLWAITVRASYLFGPTIVTRYVN*
Ga0066675_109101031	3300005187	Soil	ARARNLATGEFAEFTDFTSGWTVGVGMEHVPWQSIVLGVEANYYNINGFDHSLVDNFGVPVQFSNTSAPLWAITLRASYLFGPTITTRYVN*
Ga0066388_1023578531	3300005332	Tropical Forest Soil	YNINGFDHSLVDNFGVPVQFSNTSAPLYSITVRASYLFGPPITTRYVN*
Ga0070708_1004454701	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ANYYNVGSFDRSGVDTFGVPARFFNTSASLWSISLRASYLFSPPIVTRYVN*
Ga0070699_1017962721	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GVRVFARARNLNTGELADLTDFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTLGVPARFFNTSASLWSISLRASYLFSPPIVTRYVN*
Ga0058697_108297181	3300005562	Agave	SGVFSDFTDWSNGWTVGVGLEHVPWQSIVLGVEANVYGGITFDHAGRDSVGNPIRFFNSDATIYAITMRASYLFGQPIVTRYVN*
Ga0066903_1015950093	3300005764	Tropical Forest Soil	VGVGMEHVPWQNIVLGVEANYYNVGSFDRSTVDTFGVPVRFFNTSASLWSISVRASYLFSPPIVTRYVN*
Ga0066903_1017035141	3300005764	Tropical Forest Soil	VKVSARAVNSLSGEFADFIDWSNGWTVGVGLEHVPWQNIVFGVEANVYGGLTFDHAGRDNAGVPFRFFNSDATIWAITVRASYLFGPPIVTRYVN*
Ga0066903_1018386451	3300005764	Tropical Forest Soil	LEHVPWQNIVVGVEADFYGSLSFDHAGNDSFGVPTRYFDTSAPLWSITLRASYLFGPPIVTRYVN*
Ga0066903_1023744764	3300005764	Tropical Forest Soil	GVEANYYNVGSFDRSGVDTFGVPAQFTNTSASLWSISVRASYLFSPPIVTRYVN*
Ga0066903_1028590912	3300005764	Tropical Forest Soil	SDFTDWSNGWTVGVGLEHVPWQNIVFGVEANVYGGLTFDHAGRDNAGTPFRFFNTDATIWAITLRASYLFGQPVTTRYVN*
Ga0066903_1049622761	3300005764	Tropical Forest Soil	GLEHVPWQNIVVGVEADFYGGIKFDHSGSDNIGIAARFMDTSAPLWAITVRASYLFGQPIVTRYVN*
Ga0066903_1057378101	3300005764	Tropical Forest Soil	MLYGKGGWAGVRVNAPAANLATGVFSDFTDWSNSWTVGVGLEHVPWQNIVVGVEADFYGDIRFDHTGRDNTGGLSRNFNTSAPLWAITVRASYLFGQPIVTRYVN*
Ga0066903_1077271882	3300005764	Tropical Forest Soil	FTDFTSGWTVGVGMEHVPWQSIVLGVEANFYDVSGFDHSGRDSLGVPARFFNTSAPIWAISLRASYLFGPPIGTRYVN*
Ga0070717_100229941	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWSISLRASYLFGPTIVTRYVN*
Ga0070717_116979531	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWSISLRASYLFSPPIVTRYVN*
Ga0075421_1019977481	3300006845	Populus Rhizosphere	HVPWQSIVIGVEADFYGSLSLDRSGVDTFGTSARFFDSSAPIWAITVRASYLFGQPIVTRYVN*
Ga0099794_100559471	3300007265	Vadose Zone Soil	TDFTSGWTVGVGMEHVPWQSIVLGVEANFYDVTRFDHSGVDTFGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN*
Ga0075418_115018511	3300009100	Populus Rhizosphere	GWTVGVGMEHVPWQNIVLGVEANFYGGITFDHSGRDTAGNSFRYFDTSAPLWAITLRASYLFGQPIVTRYVN*
Ga0075418_118361891	3300009100	Populus Rhizosphere	TDWSNGWTVGVGLEHVPWQSIVIGDEADFYGSLSLDRSGVDTFGVPARFSDSSAPIWAITLRASYLFGQPIVTRYVN*
Ga0099792_111614471	3300009143	Vadose Zone Soil	ARNLATGELADFTDFTSGWTVGVGMEHVPWQSIVLGVEANFYDVSRFDHSGVDTFGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN*
Ga0114129_120428401	3300009147	Populus Rhizosphere	VLGVEANYYNINGFDHSFVDNFAVPVQFSNTSAPLYSITVRASYLFGPPIVTRYVN*
Ga0075423_111215991	3300009162	Populus Rhizosphere	YNINGFDHSFVDNFAVPVQFSNTSAPLYSITVRASYLFGPPIVTRYVN*
Ga0126384_101863782	3300010046	Tropical Forest Soil	GVRVSARARNLGTGELFDFTDLTNGWTVGVGMEHVPWQSIVLGVEANFYDVSGFDHSGADTFGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN*
Ga0126373_122887691	3300010048	Tropical Forest Soil	VLGVEANYYNVGSFDRSGVNTFGVPARFFNTSASFWSISLRASYLFSPPIVTRYVN*
Ga0126370_101142971	3300010358	Tropical Forest Soil	GEAIDFTEFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPAQFSNTSASLWSISVRASYLFSPPIVTRYVN*
Ga0126372_120500312	3300010360	Tropical Forest Soil	GVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN*
Ga0126372_127742432	3300010360	Tropical Forest Soil	GLEHVPWQNIVFGVEANVYGGITFDHAGRDNAGTPFRFFNSDATIWAITVRASYLFGPPIVTRYVN*
Ga0126372_128855782	3300010360	Tropical Forest Soil	EHVPWQNIVLGVEANVYGGLTFDHAGRDNAGTPFRFFNTDATIWAITLRASYLFGPPIVTRYVN*
Ga0126379_110308471	3300010366	Tropical Forest Soil	NYYNVGSFDRSGVDTFGVPAQFTNTSASLWSISVRASYLFSPPIVTRYVN*
Ga0126379_111864281	3300010366	Tropical Forest Soil	EANFYDVGKFDQSGLDSVGVPARFFNTSAPLWSISVRASYLFGPPIVTRYVN*
Ga0126381_1018587051	3300010376	Tropical Forest Soil	SGEFSDFIDWSNGWTVGVGLEHVPWQNIVLGVEANVYGGITFDHAGRDNACVPFRFFDSDATIWSITLRASYLFGPPIVTRYVN*
Ga0126381_1023552031	3300010376	Tropical Forest Soil	VRVSTRARDLVTGEYAEFTTFTNGWTVGVGMEHQPWQSIVLGVEANFYDVGKFDQSGLDSVGVPARFFNTSAPLWSISVRASYLFGPPIVTRYVN*
Ga0126383_113976101	3300010398	Tropical Forest Soil	VPWQNIVLGVEANYYNVGSFDRSGVDTFGVPAQFTNTSASLWSISVRASYLFSPPIVTRYVN*
Ga0124844_12629221	3300010868	Tropical Forest Soil	EHVPWQNIVLGAEANVYGGLTFDHAGRDNAGTPFRFFNTQATIWAITLRASYLFGPPIVTRYVN*
Ga0137392_114870211	3300011269	Vadose Zone Soil	PWQSIVLGVEANFYDVSRFDHSGVDTFGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN*
Ga0137364_112669882	3300012198	Vadose Zone Soil	WAGVRVSSRARNLITVEFSDFTDWTSGWPVGVGLEHVPWQSIVMGAEANFYNPTSFDHSGPDNLGVPTRFFNTSATIWAISLRASYLFGQPITTRYVN*
Ga0137362_101680951	3300012205	Vadose Zone Soil	NIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWSISLRASYLFSPPIVTRYVN*
Ga0137377_116022471	3300012211	Vadose Zone Soil	NIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWSISLRASYLFGPTIVTRYVN*
Ga0150985_1069950622	3300012212	Avena Fatua Rhizosphere	EHVPWQSIVLGVEANYYNINGFDHSFVDNFAVPVQFSNTSAPLYSITVRASYLFGPPIVTRYVN*
Ga0150985_1180137851	3300012212	Avena Fatua Rhizosphere	LEHVPWQSIVIGVEADFYGSLSLDRSGIDNFGVPARFFDSSAPIWSITLRASYLFGQPIVTRYVN*
Ga0137386_111736082	3300012351	Vadose Zone Soil	FTDWSNGWTAGVGLEHVPWQSIVLGVEANVYGGITFDHAGRDSVGNSVRFFNSDATIYAITVRASYLFGQPIVTRYVN*
Ga0137367_108261001	3300012353	Vadose Zone Soil	TDWSNGWTVGVGLEHVPWQSIVLGVEANVYGGITFDRAGRDNVGTPFRFFNSDATIYAITVRASYLFGQPIVTRYVN*
Ga0137361_106913093	3300012362	Vadose Zone Soil	GVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWSISLRASYLFGPTIVTRYVN*
Ga0137416_107367901	3300012927	Vadose Zone Soil	FDHSGVDTFGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN*
Ga0137407_104617461	3300012930	Vadose Zone Soil	IVLGVEANFYHVTGFDHSGPDSLGVPARFFNTSAPIWAISVRASYLFGPPIVTRYVN*
Ga0162650_1000016521	3300012939	Soil	GGWAGVRVSARAVNLTSLVFSEFTDWSNGWTLGVGLEHVPWQNIVLGVEANVYGGITFDHAGRDSAGNSVRFFNSDATIYAITVRASYLFGQPIVTRYVN*
Ga0126375_104532171	3300012948	Tropical Forest Soil	DFTDWSNGWTVGVGLEHVPWQNIVLGVEANVYGGLTFDHAGRDNAGVPFRFFDSDATIWAITLRASYLFGPPIVTRYVN*
Ga0164299_112148471	3300012958	Soil	AVNVTNGEFADFTTWSNGWTAGVGMEYVPWQNIVIGVEADVYGGLTFDHAGVDNFNVPFRFFNTDATIWAITVRASYLFGPTIATRYVN*
Ga0126369_103012412	3300012971	Tropical Forest Soil	EHVPWQSIVLGVEANFYDVSGFDHSGVDSFGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN*
Ga0126369_103459871	3300012971	Tropical Forest Soil	RNLNTGELADLTDFTSGWTVGVGMERVPWQNIVLGVEANYYNVGTFDRSTVDTFGVPVRFFNTSASLWSISVRASYLFSPPIVTRYVN*
Ga0126369_108768532	3300012971	Tropical Forest Soil	MEHIPWQSIVLGVEANFYDVGKFDQSGLDSVGVPARFFNTSAPLWSISVRASYLFGPPIVTRYVN*
Ga0126369_132387031	3300012971	Tropical Forest Soil	TVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWSISLRASYLFSPPIVTRYVN*
Ga0182041_120998332	3300016294	Soil	NYYNVGSFDRSTVDTFGVPVRFFNTSASLWSISVRASYLFSPPIVTRYVN
Ga0182033_101019271	3300016319	Soil	FTDFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDHSGVDTFGVPAQFSNTSASLWSISVRASYLFIPPIGTRYVN
Ga0182033_110958641	3300016319	Soil	GWTVGVGMEHVPWQNIVLGVEANFYDVTGFDHSGLDNAGVRFQFFNTSAPIWAISLRASYLFGPPIVTRYVN
Ga0182033_121588162	3300016319	Soil	SGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSTVDTFGVPVRFFNTSASLWSISVRASYLFSPPIVTRYVN
Ga0182032_100946541	3300016357	Soil	GVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWSISLRASYLFGPTIVTRYVN
Ga0182032_102307091	3300016357	Soil	GLEHVPWQSIVLGVEANFYDVSGFDHSGVDSFGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN
Ga0182032_113370071	3300016357	Soil	FDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0182034_100638463	3300016371	Soil	GVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPAQFSNTSASLWSISVRASYLFSPPIVTRYVN
Ga0182034_102637961	3300016371	Soil	GVRVSARARNLGTGEAIDFTEFTSGWTVGVGMEHVPWQNIVLGVEANFYDVTGFDHSGLDNAGVRFQFFNTSAPIWAISLRASYLFGPPIVTRYVN
Ga0182034_105642341	3300016371	Soil	TIDFTDFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWSISLRASYLFGPTIVTRYVN
Ga0182034_108882011	3300016371	Soil	TIDFTDFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRTGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0182034_113839742	3300016371	Soil	VRVNAPAANLATGVFSDFTDWSNSWTVGVGLEHVPWQNIVVGVEADFYGDIRFDHTGRDNTGGLSRNFNTSAPLWAITVRASYLFGQPIVTRYV
Ga0182040_101248743	3300016387	Soil	GVDTFGVPAQFSNTSASLWSISVRASYLFSPPIGTRYVN
Ga0182037_105426972	3300016404	Soil	TVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPAQFSNTSASLWSISVRASYLFSPPIVTRYVN
Ga0182037_107619341	3300016404	Soil	RTMLYAKGGWAGVRISARAANVTGEFSDFTDWSNGWTLGVGLEHVPWQNIVLGVEANVYGGLTFDHAGRDNAGVPFRFFNSDATIWAITLRASYLFGPPIVTRYVN
Ga0182037_110563461	3300016404	Soil	TVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0182038_112277871	3300016445	Soil	NIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWSISLRASYLFGPTIVTRYVN
Ga0184620_100391363	3300018051	Groundwater Sediment	GVEADFYGGFSLDRSGIDNLGVPARFFDSSAPIWAITVRASYLFGQPIVTRYVN
Ga0190274_119385132	3300018476	Soil	VGLEHVPWQNIVVGVEADFYDTSRFDHAGQDNLGGAARYANINAPVWAITLRASYLFGQPIVTRYVN
Ga0213872_103832041	3300021361	Rhizosphere	NGWTVGVGMEHIPWQNIVWGVEANFYDVGSFDHSGLDSVGVPARFFNTSATLWSISVRASYLFGPTIVTRYVN
Ga0213879_101660321	3300021439	Bulk Soil	GVGMEHIPWQNIVWGVEANFYDVGSFDHSGLDSVGVPARFFNTSATLWSISVRASYLFGPTIVTRYVN
Ga0126371_101066101	3300021560	Tropical Forest Soil	MEHVPWQNIVLGVEANYYNVGSFDRSGVNTFGVPARFFNTSASLWSISLRASYLFSPPIVTRYVN
Ga0126371_119875522	3300021560	Tropical Forest Soil	VGLEHVPWQNIVLGVEANVYGGITFDHAGRDNAGVPFRFFDSDATIWAITLRASYLFGPPIVTRYVN
Ga0207692_102495012	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	EFADFTTWSNGWTAGVGMEYVPWQNIVVGVEADVYGGLTFDHAGVDNFNVPFRFFNSDATIWAITVRASYLFGPTIVTRYVN
Ga0207699_100685795	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	WAGVRVSARATNFATGEFAEFTDFTSGWTIGVGMEHVPWQSIVLGVEANYYNINGFDHSFVDNFAVPVQFSNTSAPLYSITVRASYLFGPPIVTRYVN
Ga0207684_106195981	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	NVGSFDRSTVDTFGVPVRFFNTSSSLWSISVRASYLFSPPIVTRYVN
Ga0207663_101706851	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	TIGVGMEHVPWQSIVIGVEANYYNINGFDHSFVDNFAVPVQFSNTSAPLYSITVRASYLFGPPIVTRYVN
Ga0209488_102873411	3300027903	Vadose Zone Soil	VGVGMEHVPWQSIVLGVEANFYDVSRFDHSGVDTFGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN
Ga0137415_105123031	3300028536	Vadose Zone Soil	HVPWQSIVLGVEANFYDVTRFDHSGVDTFGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN
Ga0247828_110955622	3300028587	Soil	GLEHVPWQSIVIGVEADFYGSLSLDRSGIDNFGVPARFFDSSAPMWAITVRASYLFGQPIVTRYVN
Ga0307278_103513691	3300028878	Soil	VGLEHVPWQSIVIGVEADFYGGLSLDRSGIDNFGTPARFFDTSAPIWAITVRASYLFGQPIVTRYVN
Ga0308183_10286673	3300030988	Soil	VEADFYGGISLDRSGNDNFGVPARVFDSSAPVWAITLRASYLFGQPIVTRYVN
Ga0308194_100400592	3300031421	Soil	VRSSVRSVNLINGINSDFTDWSNGWTLGVGLEHVPWQSIVVGVEANVYGGITFDHAGRDSVGNPVRFFNSDASIYAITLRASYLFGQPIVTRYVN
Ga0308194_102547181	3300031421	Soil	NGEFADFTTWSNGWTAGVGMEYVPWQNIVVGVEADVYGGLTFDHAGVDNFNVPFRFFNTDATIWAITVRASYLFGPTIVTRYVN
Ga0310915_108670182	3300031573	Soil	WTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0310915_111446011	3300031573	Soil	GMEHQPWQSIVLGVEANFYDISGFDHSGADTFGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN
Ga0318561_102563731	3300031679	Soil	GVRVFARARNLATGEFADFTDFTSGWTVGVGLEHVPWQSIVLGVEANFYDVSGFDHSGVDSFGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN
Ga0318561_107310351	3300031679	Soil	VGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPAQFSNTSASLWSISVRASYLFSPPIVTRYVN
Ga0318574_105991701	3300031680	Soil	NFYDVSGFDHSGVDSFGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN
Ga0318572_108501012	3300031681	Soil	VRVSARSRNLGTGETIDFTDFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0306917_100300921	3300031719	Soil	TSGWSVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPAQFSNTSASLWSISVRASYLFSPPIVTRYVN
Ga0306917_111333651	3300031719	Soil	TDWSNGWTLGVGLEHVPWQNIVLGVEANVYGGLTFDHAGRDNAGVPFRFFNSDATIWAITLRASYLFGPPIVTRYVN
Ga0306917_113761881	3300031719	Soil	SARARNLTTGEFADFTDFTSGWTVGVGMEHVPWQSIVLGVEANFYDVSGFDHSGVDTFGVPSRFFNTSAPIWAISVRASYLFGPPIVTRYVN
Ga0318500_101739771	3300031724	Soil	VGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0306918_115449901	3300031744	Soil	RNLGTGETIDFTDFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0318502_102580551	3300031747	Soil	DFTDFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0318492_108100101	3300031748	Soil	FTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0318509_108321031	3300031768	Soil	VLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0318521_100846591	3300031770	Soil	RSGVDTFGVPAQFSNTSASLWSISVRASYLFSPPIVTRYVN
Ga0318546_100557751	3300031771	Soil	TDFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDHSGVDTFGVPAQFSNTSASLWSISVRASYLFSPPIGTRYVN
Ga0318546_108545411	3300031771	Soil	FSDFTDWSNGWTVGVGLEHVPWQNIVLGVEANVYGGLTFDHAGRDNAGVPFRFFNSDATIWAITLRASYLFGPPIVTRYVN
Ga0318498_102611601	3300031778	Soil	GWTVGVGLEHVPWQSIVLGVEANFYDVSGFDHSGVDSFGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN
Ga0318550_102413563	3300031797	Soil	PWQNIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYV
Ga0310917_100699103	3300031833	Soil	EHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPAQFSNTSASLWSISVRASYLFSPPIVTRYVN
Ga0310917_106413072	3300031833	Soil	GWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSTVDTFGVPVRFFNTSASLWSISVRASYLFSPPIVTRYVN
Ga0310917_106576101	3300031833	Soil	NVGSFDHSGVDTFGVPAQFSNTSASLWSISVRASYLFSPPIGTRYVN
Ga0310917_110065311	3300031833	Soil	DFTDWSNGWTVGVGLEHVPWQNIVLGVEANVYGGLTFDHAGRDNAGVPFRFFNSDATIWAITLRASYLFGPPIVTRYVN
Ga0318511_104771162	3300031845	Soil	WTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSTVDTFGVPVRFFNTSASLWSISVRASYLFSPPIVTRYVN
Ga0306919_102906481	3300031879	Soil	VGVGMEHVPWQNIVLGVEANYYNVGSFDRTGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0306925_1000712314	3300031890	Soil	VGMEHVPWQSIVLGVEANFYDVTGFDHSGPDSVGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN
Ga0306925_101148995	3300031890	Soil	MLYGRGGWAGVRVNAPAANLATGVFSDFTDWSNSWTVGVGLEHVPWQNIVVGVEADFYGDIRFDHTGRDNTGGLSRNFNTSAPLWAITVRASYLFGQPIVTRYVN
Ga0306925_106600162	3300031890	Soil	LGVGLEHVPWQNIVLGVEANVYGGLTFDHAGRDNAGVPFRFFNSDATIWAITLRASYLFGPPIVTRYVN
Ga0318536_106564502	3300031893	Soil	MLYGRGGWAGVRVNAPAANLATGVFSDFTDWSNSWTVGVGLEHVPWQNIVVGVEADFYGDIRFDHTGRDNTGGLSRNFNTSAPLWAITVRASYLFGQPIVTR
Ga0318520_108199151	3300031897	Soil	EANFYDVSGFDHSGVDSFGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN
Ga0306923_100521091	3300031910	Soil	NYYNVGSFDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0306923_104569141	3300031910	Soil	RTMLYGKGGWAGVRVNAPAANLATGVFSDFTDWSNSWTVGVGLEHVPWQNIVVGVEADFYGDIRFDHTGRDNTGGLSRNFNTSAPLWAITVRASYLFGQPIVTRYVN
Ga0306923_107433841	3300031910	Soil	NFYDVGSFDHSGPDSVGVNARFFNTSAPLWSISVRASYLFGTPIVTRYVN
Ga0306921_101331887	3300031912	Soil	VPWQNIVLGVEANYYNVGSFDRSGVDTFGVPAQFSNTSASLWSISVRASYLFSPPIVTRYVN
Ga0310916_100903261	3300031942	Soil	IVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWSISLRASYLFGPTIVTRYVN
Ga0310910_100101101	3300031946	Soil	ETIDFTDFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRTGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0310910_109922372	3300031946	Soil	ETIDFTDFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0310910_112422851	3300031946	Soil	YAEFTNFTNGWTVGVGMEHVPWQNIVLGVEANFYDVGSFDQSGLDSVGVPTRFSNTSATLWSISLRASYLFGPPIVTRYVN
Ga0310909_105467431	3300031947	Soil	VGSFDHSGVDTFGVPAQFSNTSASLWSISVRASYLFSPPIGTRYVN
Ga0310909_109892682	3300031947	Soil	QPWQNIVLGVEANYYNVGSFDHSTVDTRGVPTRFFNTSASLWSISVRASYLFSPPIVTRYVN
Ga0306926_130085791	3300031954	Soil	NFTNGWTVGVGMEHVPWQNIVLGVEANFYDVGSFDQSGLDSVGVPTRFSNTSATLWSISLRASYLFGPPIVTRYVN
Ga0306922_101095051	3300032001	Soil	GWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPAQFSNTSASLWSISVRASYLFSPPIVTRYVN
Ga0306922_110451491	3300032001	Soil	MLYGKGGWAGVRVNAPAANLATGVFSDFTDWSNSWTVGVGLEHVPWQNIVVGVEADFYGDIRFDHTGRDNTGGLSRNFNTSAPLWAITVRASYLFGQPIVTRYVN
Ga0306922_116402781	3300032001	Soil	WTVGVGLEHVPWQNIVLGVEANVYGGLTFDHAGRDNAGVPFRFFNSDATIWAITLRASYLFGPPIVTRYVN
Ga0318556_107665131	3300032043	Soil	AIDFTEFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSTVDTFGVPVRFFNTSASLWSISVRASYLFSPPIVTRYVN
Ga0318533_108240041	3300032059	Soil	VSGEFSDFIDWSNGWTVGVGLEHVPWQNIVLGVEANVYGGLTFDHAGRDNAGTPFRFFNTDATIWAITLRASYLFGPPIVTRYVN
Ga0318505_104568871	3300032060	Soil	NLGTGETIDFTDFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRTGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0318513_105124532	3300032065	Soil	GVRVSARARNLGTGETIDFTDFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSGVDTFGVPARFFNTSASLWAISVRASYLFSPPIVTRYVN
Ga0306924_101396431	3300032076	Soil	TGERADLTDFTSGWTVGVGMEHVPWQNIVLGVEANYYNVGSFDRSTVDTFGVPVRFFNTSASLWSISVRASYLFSPPIVTRYVN
Ga0318540_106131121	3300032094	Soil	GWTVGVGLEHVPWQNIVFGVEANVYGGITFDHAGRDNAGTPFRFFNSDATIWAITVRASYLFGPPIVTRYVN
Ga0306920_1003168653	3300032261	Soil	TMLYGRGGWAGVRVNAPAANLATGVFSDFTDWSNSWTVGVGLEHVPWQNIVVGVEADFYGDIRFDHTGRDNTGGLSRNFNTSAPLWAITVRASYLFGQPIVTRYVN
Ga0306920_1026869751	3300032261	Soil	QSIVLGVEANFYDVTGFDHSGPDSVGVPARFFNTSAPIWAISLRASYLFGPPIVTRYVN
Ga0310914_100911761	3300033289	Soil	LGVEANFYDVGSFDHSGPDSVGVNARFFNTSAPLWSISVRASYLFGTPIVTRYVN
Ga0310914_101306211	3300033289	Soil	YAKGGWAGVRISARAANVTGEFSDFTDWSNGWTLGVGLEHVPWQNIVLGVEANVYGGLTFDHAGRDNAGVPFRFFNSDATIWAITLRASYLFGPPIVTRYVN
Ga0318519_103848071	3300033290	Soil	VGMEHVPWQNIVLGVEANYYNVGSFDRSTVDTFGVPVRFFNTSASLWSISVRASYLFSPPIVTRYVN
Ga0318519_110680091	3300033290	Soil	LEHVPWQNIVFGVEANVYGGLTFDHAGRDNAGVPFRFFNSDATIWAITLRASYLFGPPIVTRYVN
Ga0247830_107479811	3300033551	Soil	VIGVEADFYGSLSLDRSGIDNFGVPARFFDSSAPIWAITVRASYLFGQPIVTRYVN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050965

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences