Metagenome / Metatranscriptome Family F050964

Basic Information
Family ID	F050964
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	47 residues
Representative Sequence	LAERLARRHGMTVAVTNRKRSPSHEIDEAAIRALRSQADLVVSGIGD
Number of Associated Samples	129
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.69 %
% of genes near scaffold ends (potentially truncated)	95.14 %
% of genes from short scaffolds (< 2000 bps)	90.28 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Most Common Taxonomy
Group	Bacteria (91.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (11.806 % of family members)
Environment Ontology (ENVO)	Unclassified (27.778 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.333 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.33% β-sheet: 0.00% Coil/Unstructured: 78.67%
Feature Viewer

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Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF00296	Bac_luciferase	7.64
PF13580	SIS_2	6.94
PF01042	Ribonuc_L-PSP	4.86
PF13378	MR_MLE_C	3.47
PF14064	HmuY	2.78
PF01380	SIS	2.78
PF01641	SelR	2.08
PF07969	Amidohydro_3	2.08
PF05685	Uma2	2.08
PF01575	MaoC_dehydratas	1.39
PF00920	ILVD_EDD	1.39
PF00583	Acetyltransf_1	0.69
PF00449	Urease_alpha	0.69
PF08445	FR47	0.69
PF00578	AhpC-TSA	0.69
PF05258	DciA	0.69
PF02771	Acyl-CoA_dh_N	0.69
PF01738	DLH	0.69
PF00152	tRNA-synt_2	0.69
PF13594	Obsolete Pfam Family	0.69
PF07238	PilZ	0.69
PF13416	SBP_bac_8	0.69
PF01547	SBP_bac_1	0.69
PF02518	HATPase_c	0.69
PF00487	FA_desaturase	0.69
PF13622	4HBT_3	0.69
PF01207	Dus	0.69
PF03466	LysR_substrate	0.69
PF02515	CoA_transf_3	0.69
PF00561	Abhydrolase_1	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	7.64
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	4.86
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	2.78
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	2.08
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	2.08
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.69
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.69
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.69
COG0804	Urease alpha subunit	Amino acid transport and metabolism [E]	0.69
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.69
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.69
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.69
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.69
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.69
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.69
COG5512	Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives)	General function prediction only [R]	0.69

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.67 %
Unclassified	root	N/A	7.64 %
Thermosipho africanus	species	Thermosipho africanus	0.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.67 %
Unclassified	root	N/A	7.64 %
Thermosipho africanus H17ap60334	strain	Thermosipho africanus → Thermosipho africanus H17ap60334	0.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.67 %
Unclassified	root	N/A	7.64 %
Thermosipho africanus H17ap60334	strain	Thermosipho africanus → Thermosipho africanus H17ap60334	0.69 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	10.42 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	9.72 %
Unclassified	root	N/A	7.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.47 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.69 %
Thermosipho africanus H17ap60334	strain	Thermosipho africanus → Thermosipho africanus H17ap60334	0.69 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10.42 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	9.72 %
Unclassified	root	N/A	7.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.39 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.69 %
Thermosipho africanus H17ap60334	strain	Thermosipho africanus → Thermosipho africanus H17ap60334	0.69 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	9.72 %
Unclassified	root	N/A	7.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.17 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.69 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.69 %
Thermosipho africanus H17ap60334	strain	Thermosipho africanus → Thermosipho africanus H17ap60334	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	8.33 %
Unclassified	root	N/A	7.64 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.78 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.69 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.69 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.69 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.69 %
Thermosipho africanus H17ap60334	strain	Thermosipho africanus → Thermosipho africanus H17ap60334	0.69 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	8.33 %
Unclassified	root	N/A	7.64 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.78 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.69 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.69 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.69 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.69 %
Thermosipho africanus H17ap60334	strain	Thermosipho africanus → Thermosipho africanus H17ap60334	0.69 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	8.33 %
Unclassified	root	N/A	7.64 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.78 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.69 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.69 %
Saccharomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora	0.69 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.69 %
Thermosipho africanus H17ap60334	strain	Thermosipho africanus → Thermosipho africanus H17ap60334	0.69 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	8.33 %
Unclassified	root	N/A	7.64 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.78 %
Saccharomonospora marina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora marina	0.69 %
Nitrospira sp. CG24C	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. CG24C	0.69 %
Sphingomonas sp. SE158	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SE158	0.69 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.69 %
Thermosipho africanus H17ap60334	strain	Thermosipho africanus → Thermosipho africanus H17ap60334	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_11621284	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1173	Open in IMG/M
3300000955\|JGI1027J12803_103704889	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300000955\|JGI1027J12803_108867966	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300001990\|JGI24737J22298_10228243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora marina	549	Open in IMG/M
3300003347\|JGI26128J50194_1013129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	520	Open in IMG/M
3300004009\|Ga0055437_10221612	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300004267\|Ga0066396_10099619	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005166\|Ga0066674_10240059	Not Available	861	Open in IMG/M
3300005175\|Ga0066673_10257521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1011	Open in IMG/M
3300005175\|Ga0066673_10878745	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005180\|Ga0066685_11034362	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005293\|Ga0065715_10335254	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300005332\|Ga0066388_107734081	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005457\|Ga0070662_101808992	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300005467\|Ga0070706_100609417	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300005468\|Ga0070707_100311326	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300005468\|Ga0070707_101231701	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005569\|Ga0066705_10881464	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005586\|Ga0066691_10130352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1434	Open in IMG/M
3300005616\|Ga0068852_101910426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	616	Open in IMG/M
3300006845\|Ga0075421_102512390	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300006846\|Ga0075430_101154367	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300006853\|Ga0075420_100326967	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300006853\|Ga0075420_100755444	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300006880\|Ga0075429_101292970	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	636	Open in IMG/M
3300006894\|Ga0079215_10441324	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300007076\|Ga0075435_100371575	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300007076\|Ga0075435_100596346	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300009038\|Ga0099829_10858773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300009090\|Ga0099827_10609980	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	941	Open in IMG/M
3300009137\|Ga0066709_103116166	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	606	Open in IMG/M
3300009147\|Ga0114129_10146945	All Organisms → cellular organisms → Bacteria	3228	Open in IMG/M
3300009147\|Ga0114129_13373990	Not Available	514	Open in IMG/M
3300009156\|Ga0111538_13721497	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300009799\|Ga0105075_1043634	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300009816\|Ga0105076_1111726	Not Available	537	Open in IMG/M
3300009821\|Ga0105064_1050231	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300009836\|Ga0105068_1041169	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. CG24C	823	Open in IMG/M
3300010047\|Ga0126382_11688415	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300010304\|Ga0134088_10117771	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300010358\|Ga0126370_10266163	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300010359\|Ga0126376_10230426	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300010359\|Ga0126376_10947763	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	856	Open in IMG/M
3300010359\|Ga0126376_11148220	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300010362\|Ga0126377_10201276	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300010366\|Ga0126379_13157312	Not Available	552	Open in IMG/M
3300011270\|Ga0137391_10841056	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300012034\|Ga0137453_1132020	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300012035\|Ga0137445_1122464	Not Available	530	Open in IMG/M
3300012202\|Ga0137363_10594098	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300012203\|Ga0137399_10361674	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300012203\|Ga0137399_11680358	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300012211\|Ga0137377_10537732	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300012211\|Ga0137377_11487978	Not Available	603	Open in IMG/M
3300012353\|Ga0137367_11195712	Not Available	508	Open in IMG/M
3300012358\|Ga0137368_10263233	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1185	Open in IMG/M
3300012359\|Ga0137385_10769213	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300012360\|Ga0137375_10644044	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	874	Open in IMG/M
3300012361\|Ga0137360_10927779	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300012402\|Ga0134059_1074701	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300012929\|Ga0137404_11057884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	743	Open in IMG/M
3300012951\|Ga0164300_10791165	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300012977\|Ga0134087_10756773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300012986\|Ga0164304_11175281	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300012989\|Ga0164305_11893618	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300013308\|Ga0157375_11714776	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300014302\|Ga0075310_1022451	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300014497\|Ga0182008_10119770	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300015371\|Ga0132258_12496880	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300015373\|Ga0132257_100076837	All Organisms → cellular organisms → Bacteria → Proteobacteria	3793	Open in IMG/M
3300016357\|Ga0182032_10152520	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300016387\|Ga0182040_11500711	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300016445\|Ga0182038_10694362	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300017944\|Ga0187786_10057787	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300017973\|Ga0187780_10341606	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300017994\|Ga0187822_10113215	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300018079\|Ga0184627_10285689	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300019259\|Ga0184646_1017381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300019789\|Ga0137408_1462907	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1244	Open in IMG/M
3300019879\|Ga0193723_1003730	All Organisms → cellular organisms → Bacteria → Proteobacteria	5363	Open in IMG/M
3300020070\|Ga0206356_10751716	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300020109\|Ga0194112_10289798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1248	Open in IMG/M
3300021088\|Ga0210404_10483275	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300022756\|Ga0222622_11469109	Not Available	502	Open in IMG/M
3300023067\|Ga0247743_1063535	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300025324\|Ga0209640_11340798	Not Available	527	Open in IMG/M
3300025560\|Ga0210108_1026281	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300025711\|Ga0207696_1083898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SE158	878	Open in IMG/M
3300025925\|Ga0207650_10402808	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300025933\|Ga0207706_10249447	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300025933\|Ga0207706_10929874	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300025934\|Ga0207686_10075385	All Organisms → cellular organisms → Bacteria	2184	Open in IMG/M
3300025941\|Ga0207711_11320063	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300025972\|Ga0207668_10955273	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	765	Open in IMG/M
3300025999\|Ga0208417_101479	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300026296\|Ga0209235_1285243	Not Available	505	Open in IMG/M
3300026315\|Ga0209686_1030465	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2075	Open in IMG/M
3300026324\|Ga0209470_1043974	All Organisms → cellular organisms → Bacteria	2192	Open in IMG/M
3300026329\|Ga0209375_1061404	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300026331\|Ga0209267_1056538	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300026535\|Ga0256867_10078583	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300026552\|Ga0209577_10011076	All Organisms → cellular organisms → Bacteria	8175	Open in IMG/M
3300027013\|Ga0209884_1038946	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300027277\|Ga0209846_1039598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	737	Open in IMG/M
3300027490\|Ga0209899_1100139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	554	Open in IMG/M
3300027490\|Ga0209899_1104939	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300027655\|Ga0209388_1033918	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300027682\|Ga0209971_1000085	All Organisms → cellular organisms → Bacteria	28632	Open in IMG/M
3300027787\|Ga0209074_10494811	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300027821\|Ga0209811_10082499	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300027882\|Ga0209590_10383468	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300028590\|Ga0247823_11379321	Not Available	528	Open in IMG/M
3300028812\|Ga0247825_10672741	Thermosipho africanus → Thermosipho africanus H17ap60334	744	Open in IMG/M
3300028889\|Ga0247827_10011905	All Organisms → cellular organisms → Bacteria → Proteobacteria	3445	Open in IMG/M
3300030336\|Ga0247826_11665036	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300031170\|Ga0307498_10147390	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10191056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300031226\|Ga0307497_10033787	All Organisms → cellular organisms → Bacteria	1689	Open in IMG/M
3300031228\|Ga0299914_10618259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	924	Open in IMG/M
3300031548\|Ga0307408_100122669	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2015	Open in IMG/M
3300031719\|Ga0306917_10156378	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300031720\|Ga0307469_10298010	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300031740\|Ga0307468_100670039	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300031748\|Ga0318492_10763065	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300031764\|Ga0318535_10491353	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300031793\|Ga0318548_10138408	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300031795\|Ga0318557_10042452	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300031835\|Ga0318517_10225384	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300031854\|Ga0310904_10049807	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300031890\|Ga0306925_12021253	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031894\|Ga0318522_10258839	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300031897\|Ga0318520_10413180	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300031913\|Ga0310891_10207329	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	661	Open in IMG/M
3300031943\|Ga0310885_10642286	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300032004\|Ga0307414_11277322	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300032055\|Ga0318575_10013359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3250	Open in IMG/M
3300032066\|Ga0318514_10292777	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300032067\|Ga0318524_10319240	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300032180\|Ga0307471_100070734	All Organisms → cellular organisms → Bacteria	3008	Open in IMG/M
3300032180\|Ga0307471_100109287	All Organisms → cellular organisms → Bacteria	2538	Open in IMG/M
3300032180\|Ga0307471_102974673	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300032180\|Ga0307471_103621009	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300032205\|Ga0307472_100334042	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300034176\|Ga0364931_0112792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.86%
Host-Associated	Host-Associated	20.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.61%
Plants	Host-Associated → Plants	20.14%
Aquatic	Environmental → Aquatic	6.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.86%
Sediment	Environmental → Aquatic → Sediment	2.78%
Freshwater	Environmental → Aquatic → Freshwater	2.08%
Marine	Environmental → Aquatic → Marine	1.39%
Floodplain	Environmental → Terrestrial → Floodplain	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.81%
Loam	Environmental → Terrestrial → Soil → Loam	6.94%
Sand	Environmental → Terrestrial → Soil → Sand	6.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.08%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.39%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Lake	Environmental → Aquatic → Freshwater → Lake	0.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.33%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.25%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.08%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.39%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.69%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.69%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.69%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.94%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.47%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.08%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.39%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.39%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.39%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.39%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.39%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.69%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.69%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.69%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300003347	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM	Host-Associated	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009799	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012035	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020109	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400m	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025999	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_201 (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027013	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_116212844	3300000550	Soil	FNSDTLLRKLADRLHRRHGMTVSITTRKRSPSHEIDEAGIRALRSQADLVVSGIGD*
JGI1027J12803_1037048891	3300000955	Soil	LLRLADRLGRLHGMTVSRMERKRSPSHEVDEAAIDALRKQSDFVVSGIGD*
JGI1027J12803_1088679662	3300000955	Soil	MTVSITNRKRSPSHEIDEAGIRALRSQADLVVSGIGD*
JGI24737J22298_102282431	3300001990	Corn Rhizosphere	NTKFNAKPILEKLAERLGRRHQTTVTFRTRKRSASHEVDGDAIKALRAQCDLVISGIGD*
JGI26128J50194_10131291	3300003347	Arabidopsis Thaliana Rhizosphere	KLADRLAARXHMTVSVTSRKRSPSHEVDEAGIAALRAQADLVISGIGD*
Ga0055437_102216122	3300004009	Natural And Restored Wetlands	RRHGMQVALTSRKRSPSHEIDERAIEALRSQADLVISGIGD*
Ga0066396_100996193	3300004267	Tropical Forest Soil	GRRHGMTVARMVRKRSPSHEVDEAAVEALRKQSDFVVSGIGD*
Ga0066674_102400591	3300005166	Soil	LLLRLADRLGRRHRMTVAGMVRKRSPSHEVDEAAIASLRKQSDFVVSGIGD*
Ga0066673_102575213	3300005175	Soil	TLLHKLAERLGRRHGATVTLTSRKRSPSHEIDEAAVKALRSQADLVISGIGD*
Ga0066673_108787452	3300005175	Soil	TLLHKLAERLGRRHGATVTLTSRKRSPSHEIDEAAVKALRRQADLVVSGIGD*
Ga0066685_110343623	3300005180	Soil	SDKLLLRLADRLGRRHGMTVSRMVRKRSPSHEVDEAAIGALRKQSDFVVSGIGD*
Ga0065715_103352543	3300005293	Miscanthus Rhizosphere	NSDTLLRKLAERLQQRHDTRVTVTRRKRSPSHEIDENDIKTLRSQADLVVSGIGD*
Ga0066388_1077340813	3300005332	Tropical Forest Soil	LAARHGMQVTVTNRKRSPSHEIDEAGIKSLRAQADLVISGIGD*
Ga0070662_1018089921	3300005457	Corn Rhizosphere	LRKLAERLQQRHDTRVTVTRRKRSPSHEIDENDIKTLRSQADLVVSGIGD*
Ga0070706_1006094173	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ARHHMTVSATNRKRSPSHEIDEAGVAALRAQTDLVISGIGD*
Ga0070707_1003113261	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	HHMTVSATNRKRSPSHEIDEAGVAALRAQTDLVISGIGD*
Ga0070707_1012317013	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	HQMTVTVRNRKRSASHEVDGDGIKALRAQADLVISGIGD*
Ga0066705_108814641	3300005569	Soil	AERLGRRHGATVTLTSRKRSPSHEIDEAAVKALRSQADLVISGIGD*
Ga0066691_101303523	3300005586	Soil	LGRRHGATVTLTSRKRSPSHEIDEAAVKALRSQADLVVSGIGD*
Ga0068852_1019104263	3300005616	Corn Rhizosphere	KPILEKLAERLGRRHQTTVTFRTRKRSASHEVDGDAIKALRAQCDLVISGIGD*
Ga0075421_1025123901	3300006845	Populus Rhizosphere	LHGMTVARMVRKRSPSHEVDEASVEALRKQSDFVVSGIGD*
Ga0075430_1011543671	3300006846	Populus Rhizosphere	ALLRKLADRLHRRHGMTVSITNRKRSPSHEIDEAGIRALRSQADLVVSGIGD*
Ga0075420_1003269674	3300006853	Populus Rhizosphere	NSDTLLRKLADRLHRRHGMTVSITNRKRSPSHEIDEAGIRALRSQADLVVSGIGD*
Ga0075420_1007554441	3300006853	Populus Rhizosphere	AQQLGVRHGMTVAHLDRKRSASHEVAETAIEAFKRRVDFVVSGIGD*
Ga0075429_1012929701	3300006880	Populus Rhizosphere	GDRLRDRHGMVVAPMTTKRSPSHEVEEAQIKTLRKQADLVVSGIGD*
Ga0079215_104413243	3300006894	Agricultural Soil	FNSEPILQRLAQRLGTRHGMTVAHLDRKRSASHEVAETAIEAFKRRVDFVVSGIGD*
Ga0075435_1003715751	3300007076	Populus Rhizosphere	HQMTVTVRNRKRSASHEVDEGGIQALRAQADLVISGIGD*
Ga0075435_1005963461	3300007076	Populus Rhizosphere	MTVARMVRKRSPSHEVDEASLEVLRAQADFVVSGIGD*
Ga0099829_108587731	3300009038	Vadose Zone Soil	ILEKVAARLAARHGTSVTVRNRKRSPSHEIDEAAVRDLHARTDLVISGIGD*
Ga0099827_106099802	3300009090	Vadose Zone Soil	VLLLRLADRLGRRHGMTVARMVRKRSPSREVDEAAIDALRAQSDFVVSGIGD*
Ga0066709_1031161661	3300009137	Grasslands Soil	DTLLHKLAERLGRRHGATVTLTSRKRSPSHEIDEAAVKALRGQADLVVSGIGD*
Ga0114129_101469455	3300009147	Populus Rhizosphere	NTKFNASPILERLAERLAQRHQMTVTVRNRKRSASHEVDEGGIQALRAQTDLVISGIGD*
Ga0114129_133739903	3300009147	Populus Rhizosphere	TVTVTNRKRSPSHEVDGAGIAALRAQSDLVISGIGD*
Ga0111538_137214972	3300009156	Populus Rhizosphere	DVLLQRMADRLGRRHGMTVARMVRKRSPSHEVDEVSIEALRAQSDFVVSGIGD*
Ga0105075_10436343	3300009799	Groundwater Sand	RLGRRHGMTVACMVRKRSPSHEVDEAAIDALRRQSDFIVSGIGD*
Ga0105076_11117263	3300009816	Groundwater Sand	AERLARRHGMTVAVTNRKRSPSHEIDEAAVRALRSQADLVVSGIGD*
Ga0105064_10502313	3300009821	Groundwater Sand	LADRLGRRHGMTVARMVRKRSPSHEVDEAAIDALRRQSDFIVSGIGD*
Ga0105068_10411694	3300009836	Groundwater Sand	RHGMTVAVTNRKRSPSHEIDEAAIRALRSQADLVVSGIGD*
Ga0126382_116884153	3300010047	Tropical Forest Soil	LGKLADRLRRRHGMTVSVTNRKRSPSHEIDEAGIRALRSQADLVVSGIGD*
Ga0134088_101177711	3300010304	Grasslands Soil	ARMVRKRSPSHEVDEAAIDALRRQSDFVVSGIGD*
Ga0126370_102661631	3300010358	Tropical Forest Soil	TLLRKLAERLAARHGMQVTVTNRKRSPSHEIDEAGIKALRAQADLVISGIGD*
Ga0126376_102304264	3300010359	Tropical Forest Soil	LLRRLADRLGQRHGMTVARMVRKRSPSHEVDEAAVEALRAQSDFVVSGIGD*
Ga0126376_109477631	3300010359	Tropical Forest Soil	KLADRLRRRHGMTVSVTNRKRSPSHEIDEAGIRALRSQADLVVSGIGD*
Ga0126376_111482203	3300010359	Tropical Forest Soil	RHGMQVTVTNRKRSPSHEIDEAGIKALRDQTDLVISGIGD*
Ga0126377_102012765	3300010362	Tropical Forest Soil	LLRKLADRLAARHHMTVSVTNRKRSPSHEVDEAGIAALRAQADLVISGIGD*
Ga0126379_131573123	3300010366	Tropical Forest Soil	KKLAERLAKRHDMTVTATNRKRSPSHEIDEAGVKALRAQCDLVISGIGD*
Ga0137391_108410564	3300011270	Vadose Zone Soil	THMARKRSPSHEVDEAAVAALRAQSDVVIAGIGD*
Ga0137453_11320201	3300012034	Soil	MVTVRNRKRSASHEVDGDGIRALRAQADLVISGIGD*
Ga0137445_11224641	3300012035	Soil	FNASPILEKLAERLARRHHMTVTVRNRKRSASHEVDGDGIRALRAQADLVISGIGD*
Ga0137363_105940983	3300012202	Vadose Zone Soil	FNASPILERLAERLARRHQMTVTVRNRKRSASHEVDGDGIKALRAQADLVISGIGD*
Ga0137399_103616743	3300012203	Vadose Zone Soil	RHGATVTVTNRKRSPSHEIDEAGVRALRDAHLVVSGIGD*
Ga0137399_116803583	3300012203	Vadose Zone Soil	AERLGRRHGATVTLTSRKRSPSHEIDEAAVKALRSQADLVVSGIGD*
Ga0137377_105377321	3300012211	Vadose Zone Soil	PILEKLAERLAQRHQMTVTVRNRKRSASHEVDGDGIKALRAQADLVISGIGD*
Ga0137377_114879783	3300012211	Vadose Zone Soil	HGATVTLTSRKRSPSHEIDEAVVKALRSQADLVVSGIGD*
Ga0137367_111957123	3300012353	Vadose Zone Soil	DTLLRKLAERLARRHGMTVAVTNRKRSPSHEIDEAAIRALRSQADLVVSGIGD*
Ga0137368_102632331	3300012358	Vadose Zone Soil	LRKLAERLARRHGMTVAVTNRKRSPSHEIDEAAIRALRSQADLVVSGIGD*
Ga0137385_107692133	3300012359	Vadose Zone Soil	NTKFNASPILEKLAERLAQRHQMTVTVRNRKRSASHEVDGDGIKALRAQADLVISGIGD*
Ga0137375_106440441	3300012360	Vadose Zone Soil	HGMTVAVTNRKRSPSHEIDEAAIRALRSRADLVVSGIGD*
Ga0137360_109277793	3300012361	Vadose Zone Soil	LRLADRLGRRHGMSVASMARKRSPSHEVDEAAITALRAQSDFVVSGIGD*
Ga0134059_10747011	3300012402	Grasslands Soil	LLLRLADRLGRRHRMTVAGMVRKRSPSHEVDEAAIASLREQSDFVVSGIGD*
Ga0137404_110578841	3300012929	Vadose Zone Soil	KLAERLGRRHGATVTLISRKRSPSHEIDEAAVKALRSQADLVVSGIGD*
Ga0164300_107911651	3300012951	Soil	SPILERLAERLAQRHQMTVTVRNRKRSASHEVDEAGIQALRAQADLVISGIGD*
Ga0134087_107567731	3300012977	Grasslands Soil	LAERLARRHGMTVTLTSRKRSPSHEIDEAAVRALRKQADFVVSGIGD*
Ga0164304_111752811	3300012986	Soil	AERLSRRHQMTVTFRTRKRSASHEVDGDAIKALRAQCDLVISGIGD*
Ga0164305_118936181	3300012989	Soil	HGMTVTRMVRKRSPSHEVDETALEALRAESDFVVSGIGD*
Ga0157375_117147763	3300013308	Miscanthus Rhizosphere	FNSDTLLVKLAQRLRQRHGAQVTVTRRKRSPSHEIDENDIKTLRTQADLVVSGIGD*
Ga0075310_10224511	3300014302	Natural And Restored Wetlands	RHGTRVTATRRKRSPSHEIDENDIKTLRSQADLVVSGIGD*
Ga0182008_101197703	3300014497	Rhizosphere	QTTVTFRTRKRSASHEVDGDAIKALRAQCDLVISGIGD*
Ga0132258_124968801	3300015371	Arabidopsis Rhizosphere	RRLADRLGRRHGMTVTRMVRKRSPSHEVDETALETLRAESDFVVSGIGD*
Ga0132257_1000768371	3300015373	Arabidopsis Rhizosphere	HRLADRLGRLHGMTVARMVRKRSPSHEVDETSVEALRKQSDFVVSGIGD*
Ga0182032_101525203	3300016357	Soil	LHGMTVARMVRKRSPSHEVDEVSIEALRTQADFVVSGIGD
Ga0182040_115007113	3300016387	Soil	GMTVSRMARKRSPSHEVDEASLEALRAQSDFVVSGIGD
Ga0182038_106943623	3300016445	Soil	LGRRHGMTVSRMARKRSPSHEVDEASLEALRAQSDFVVSGIGD
Ga0187786_100577873	3300017944	Tropical Peatland	KLAERLARRHQMTVTVRNRKRSASHEIDEGAIKALRAQVDLVISGIGD
Ga0187780_103416061	3300017973	Tropical Peatland	HQMKVSVTNRKRSPSHEVDEAGIRALRAQADLVISGIGD
Ga0187822_101132153	3300017994	Freshwater Sediment	EKLAERLAQRHQMRVTVRNRKRSASHEVDGDGIKALRAQADLVISGIGD
Ga0184627_102856891	3300018079	Groundwater Sediment	TVTATNRKRSPSHEIDEAGIRALRAQSDLVISGIGD
Ga0184646_10173811	3300019259	Groundwater Sediment	LAERLARRHGMTVAVTNRKRSPSHEIDEAAIRALRSQADLVVSGIGD
Ga0137408_14629071	3300019789	Vadose Zone Soil	KFNSDTLLQKLAERLGRRHGATVTLTSRKRSPSHEIDEAAVKALRSQADLVVSGIGD
Ga0193723_10037301	3300019879	Soil	ERLAQRHHMTVTVRNRKRSASHEVDADGIKALRAQADLVISGIGD
Ga0206356_107517161	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	KLAERLGRRHQTTVTFRTRKRSASHEVDGDAIKALRAQCDLVISGIGD
Ga0194112_102897983	3300020109	Freshwater Lake	KVNSSAILEKLAERLAARHGTTVTVRNSKRSMSHEIDDAAIAALRGGADVVISGIGD
Ga0210404_104832753	3300021088	Soil	LSQRHQMTVTVRNRKRSASHEVDEAGIQALRAQTDLVISGIGD
Ga0222622_114691091	3300022756	Groundwater Sediment	GAEVTVTRRKRSPSHEIDENDIKTLRTQADLVVSGIGD
Ga0247743_10635351	3300023067	Soil	DTLLRKLADRLAARHHMTVSVTSRKRSPSHEVDEAGIAALRAQADLVISGIGD
Ga0209640_113407983	3300025324	Soil	KKLAERLARRHQMTVTATNRKRSPSHEIDEAGIRALRAQSDLVISGIGD
Ga0210108_10262811	3300025560	Natural And Restored Wetlands	LLAKLAERLRRRHGMQVALTSRKRSPSHEIDERAVEALRSQADLVISGIGD
Ga0207696_10838983	3300025711	Switchgrass Rhizosphere	MTVALTSRKRSPSHEIDEAAVKTLRAQADLVVSGIGD
Ga0207650_104028082	3300025925	Switchgrass Rhizosphere	VKLAERLRQRHGAQVTVTRRKRSPSHEIDENDIKTLRTQADLVVSGIGD
Ga0207706_102494474	3300025933	Corn Rhizosphere	HMTVSVTSRKRSPSHEVDEAGIAALRAQADLVISGIGD
Ga0207706_109298741	3300025933	Corn Rhizosphere	LAERLQQRHDTRVTVTRRKRSPSHEIDENDIKTLRSQADLVVSGIGD
Ga0207686_100753851	3300025934	Miscanthus Rhizosphere	KLADRLARRHGMTVALTSRKRSPSHEIDEAAVKTLRAQADLVVSGIGD
Ga0207711_113200631	3300025941	Switchgrass Rhizosphere	NTKFNAKPILEKLAERLGRRHQTTVTFRTRKRSASHEVDGDAIKALRAQCDLVISGIGD
Ga0207668_109552733	3300025972	Switchgrass Rhizosphere	KLADRLRRRHGMTVSVTNRKRSPSHEIDEAGIRALRSQADLVVSGIGD
Ga0208417_1014791	3300025999	Rice Paddy Soil	RKLAERLAKRHRMTVTVTNRKRSPSHEVDEAGIRALRAQSDLVISGIGD
Ga0209235_12852431	3300026296	Grasslands Soil	SDTLLRKLAERLARRHGMTVAVTNRKRSPSHEIDEAAIRALRSQADLVVSGIGD
Ga0209686_10304651	3300026315	Soil	SDTLLHKLAERLGRRHGATVTLTSRKRSPSHEIDEAAVKALRSQADLVVSGIGD
Ga0209470_10439744	3300026324	Soil	RRHGMSVSRMVRKRSPSHEVDEAAIDALRKQSDFIVSGIGD
Ga0209375_10614044	3300026329	Soil	LADRLGRRHGMTVSRMVRKRSPSHEVDEAAIGALRKQSDFVVSGIGD
Ga0209267_10565384	3300026331	Soil	DTLLTRLAERLARRHGMTVMLTSRKRSPSHEIDEAAVRALRKQADFVVSGIGD
Ga0256867_100785831	3300026535	Soil	LAARHQMTVSATNRKRSPSHEIDEAGIRALRAQSDLVISGIGD
Ga0209577_1001107615	3300026552	Soil	LARRHGMTVTLTSRKRSPSHEIDEAAVRALRKQADFVVSGIGD
Ga0209884_10389461	3300027013	Groundwater Sand	MTVAVTNRKRSPSHEIDEAAIRALRSQADLVVSGIGD
Ga0209846_10395983	3300027277	Groundwater Sand	DTLLRKLAERLARRHGMAVAVTNRKRSPSHEIDEAAIRALRSQADLVVSGIGD
Ga0209899_11001393	3300027490	Groundwater Sand	KLADRLHRRFGMRVTLLDRKRSPSHEVTEAAVAALRRQADFVVSGIGD
Ga0209899_11049391	3300027490	Groundwater Sand	LLRLADRLGRRHGMTVARMVRKRSPSHEVDEAAIDALRRQSDFIVSGIGD
Ga0209388_10339181	3300027655	Vadose Zone Soil	LRLAERLGRRHGMTVSRMVRKRSPSHEVDEAAINALRKQSDFVVSGIGD
Ga0209971_100008532	3300027682	Arabidopsis Thaliana Rhizosphere	NSDTLLRKLADRLAARHHMTVSVTSRKRSPSHEVDEAGIAALRAQADLVISGIGD
Ga0209074_104948111	3300027787	Agricultural Soil	NTKFNARPILEKLAERLGRRHQMTVTVRTRKRSASHEVDGDAIKALRAQCDLVISGVGD
Ga0209811_100824995	3300027821	Surface Soil	TRVTLTRRKRSPSHEIDENDIKTLRSQADLVVSGIGD
Ga0209590_103834683	3300027882	Vadose Zone Soil	VLLLRLADRLGRRHGMTVARMVRKRSPSREVDEAAIDALRAQSDFVVSGIGD
Ga0247823_113793211	3300028590	Soil	RRHQTTVTFRTRKRSASHEVDGDAIKALRAQCDLVISGIGD
Ga0247825_106727411	3300028812	Soil	YGVSMTHMARKRSPSHEVDDAALATLKAQSDVVVSGIGD
Ga0247827_100119051	3300028889	Soil	LLRKLADRLHRRHGMTVSITNRKRSPSHEIDEAGIRALRSQADLVVSGIGD
Ga0247826_116650361	3300030336	Soil	DTLLGKLAERLRARHGTTVALTSRKRSPSHEIDEAAVHALRRQADLVISGIGD
Ga0307498_101473903	3300031170	Soil	GMTVSRMVRKRSPSHEVDEAAIDALRKQSDFVVSGIGD
(restricted) Ga0255310_101910563	3300031197	Sandy Soil	ERLARRHQMTVTVRTRKRSASHEVDEAGIKALRAQADLVISGIGD
Ga0307497_100337874	3300031226	Soil	HGMTVSVTNRKRSPSHEIDEAGIRALRSQADLVVSGIGD
Ga0299914_106182591	3300031228	Soil	RVLLQKLAERLDRRHRMTVAHVDRKRSPSHEVTELAVAALRRQADFVVSGIGD
Ga0307408_1001226695	3300031548	Rhizosphere	ADRLARRHGVTVTVTNRKRSPSHEIDEAGIRALRAQADLVVSGIGD
Ga0306917_101563781	3300031719	Soil	WLGRLHGMTVARMVRKRSPSHEVDEVSIEALRTQADFVVSGIGD
Ga0307469_102980103	3300031720	Hardwood Forest Soil	LLRLGDRLARRYGMTVARMVRKRSPSHEVDEAAIEALRKQSDFVVSGIGD
Ga0307468_1006700393	3300031740	Hardwood Forest Soil	MRVTLTSRKRSPSHEIDEGAVKTLRAQADLVVSGIGD
Ga0318492_107630651	3300031748	Soil	LLKRLADRLGRRHGMTVSRMARKRSPSHEVDEASVEALRAQSDFVVSGIGD
Ga0318535_104913531	3300031764	Soil	HGMTVARMVRKRSPSHEVDEVSIEALRTQADFVVSGIGD
Ga0318548_101384083	3300031793	Soil	LRRLADRLGRLHGMTVARMVRKRSPSHEVDEVSIEALRTQADFVVSGIGD
Ga0318557_100424525	3300031795	Soil	HGMQVTVTNRKRSPSHEIDEARIKALRAQADLVISGIGD
Ga0318517_102253844	3300031835	Soil	MQVTVTNRKRSPSHEIDEAGIKALRAQADLVISGIGD
Ga0310904_100498073	3300031854	Soil	MTVTRMVRKRSPSHEVDETALETLRAESDFVVSGIGD
Ga0306925_120212533	3300031890	Soil	SDVLLRRLADRLGRLHGMTVARMVRKRSPSHEVDEVSIEALRTQADFVVSGIGD
Ga0318522_102588391	3300031894	Soil	FNSDTLLRKLAERLTARHGMQVTVTNRKRSPSHEIDEAGIKALRAQADLVISGIGD
Ga0318520_104131801	3300031897	Soil	TVSRMARKRSPSHEVDEASVEALRAQSDFVVSGIGD
Ga0310891_102073291	3300031913	Soil	LADRLHRRHGMTVSITNRKRSPSHEIDEAGIRALRSQADLVVSGIGD
Ga0310885_106422861	3300031943	Soil	MTHMARKRSPSHEVDDAALATLKAQSDVVVSGIGD
Ga0307414_112773221	3300032004	Rhizosphere	RHGVRVTVTRRKRSPSHEIDENDIKTLRSQADLVVSGIGD
Ga0318575_100133591	3300032055	Soil	ARHGMQVTVTNRKRSPSHEIDEARIKALRAQADLVISGIGD
Ga0318514_102927774	3300032066	Soil	LTARHGMQVTVTNRKRSPSHEIDEARIKALRAQADLVISGIGD
Ga0318524_103192401	3300032067	Soil	KFNSDTLLRKLAERLTARHGMQVTVTNRKRSPSHEIDEAGIKALRAQADLVISGIGD
Ga0307471_1000707341	3300032180	Hardwood Forest Soil	KFNSDTLLNKLAARLVARHHMTVSATNRKRSPSHEIDEAGVAALRAQTDLVISGIGD
Ga0307471_1001092871	3300032180	Hardwood Forest Soil	SDKLLLRLADRLGRRHGMTVSRMVRKRSPSHEVDEAAIDALRKQSDFVVSGIGD
Ga0307471_1029746731	3300032180	Hardwood Forest Soil	HGMTVSRMVRKRSPSHEVDEAAIEALRKQSDFVVSGIGD
Ga0307471_1036210093	3300032180	Hardwood Forest Soil	KLAERLGRRHGATVTLTSRKRSPSHEIDEAAVKALRSQADLVVSGIGD
Ga0307472_1003340421	3300032205	Hardwood Forest Soil	LQRMADRLGRRHGMTVSRMVRKRSPSHEVDEASVEALRAQSDFVVSGIGD
Ga0364931_0112792_696_863	3300034176	Sediment	NSDTLLVKLAERLNRRHGTRVTITRRKRSPSHEIDEGAIKALRSQADLVVSGIGD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters