NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F050867

Metagenome / Metatranscriptome Family F050867

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F050867
Family Type Metagenome / Metatranscriptome
Number of Sequences 144
Average Sequence Length 85 residues
Representative Sequence VERLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGEDET
Number of Associated Samples 129
Number of Associated Scaffolds 144

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.31 %
% of genes from short scaffolds (< 2000 bps) 94.44 %
Associated GOLD sequencing projects 128
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (60.417 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(31.250 % of family members)
Environment Ontology (ENVO) Unclassified
(29.167 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(67.361 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.34%    β-sheet: 0.00%    Coil/Unstructured: 47.66%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 144 Family Scaffolds
PF03979Sigma70_r1_1 68.75
PF04546Sigma70_ner 25.00
PF12277DUF3618 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 144 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 93.75


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.11 %
UnclassifiedrootN/A38.89 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001867|JGI12627J18819_10383219All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300002681|Ga0005471J37259_111091Not Available606Open in IMG/M
3300003368|JGI26340J50214_10181510All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales522Open in IMG/M
3300004082|Ga0062384_101223813All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales547Open in IMG/M
3300004120|Ga0058901_1552742All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81986Open in IMG/M
3300005176|Ga0066679_10274137All Organisms → cellular organisms → Bacteria1092Open in IMG/M
3300005332|Ga0066388_102786255All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088893Open in IMG/M
3300005363|Ga0008090_15415324All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811835Open in IMG/M
3300005435|Ga0070714_100674158All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81996Open in IMG/M
3300005437|Ga0070710_10131313All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811527Open in IMG/M
3300005437|Ga0070710_11047153Not Available597Open in IMG/M
3300005454|Ga0066687_10995849Not Available500Open in IMG/M
3300005518|Ga0070699_100523698All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00881078Open in IMG/M
3300005566|Ga0066693_10362525All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales585Open in IMG/M
3300005587|Ga0066654_10464194All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81693Open in IMG/M
3300006046|Ga0066652_100252866Not Available1544Open in IMG/M
3300009012|Ga0066710_102339887All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300009143|Ga0099792_10567936Not Available719Open in IMG/M
3300009792|Ga0126374_11664526Not Available529Open in IMG/M
3300010047|Ga0126382_11585524All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300010072|Ga0127428_157028Not Available662Open in IMG/M
3300010079|Ga0127436_162563All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81872Open in IMG/M
3300010090|Ga0127471_1022981Not Available604Open in IMG/M
3300010098|Ga0127463_1037864All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300010099|Ga0127450_1004591Not Available623Open in IMG/M
3300010100|Ga0127440_1108297Not Available614Open in IMG/M
3300010118|Ga0127465_1126895Not Available736Open in IMG/M
3300010121|Ga0127438_1077148All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales661Open in IMG/M
3300010139|Ga0127464_1003184All Organisms → cellular organisms → Bacteria → Proteobacteria943Open in IMG/M
3300010141|Ga0127499_1159893All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales515Open in IMG/M
3300010145|Ga0126321_1121927All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300010152|Ga0126318_10899464All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300010154|Ga0127503_11291441Not Available652Open in IMG/M
3300010361|Ga0126378_10213359All Organisms → cellular organisms → Bacteria2011Open in IMG/M
3300010362|Ga0126377_11898377Not Available671Open in IMG/M
3300010376|Ga0126381_103502434All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300010856|Ga0126358_1088954All Organisms → cellular organisms → Bacteria → Proteobacteria970Open in IMG/M
3300010856|Ga0126358_1237635All Organisms → cellular organisms → Bacteria → Proteobacteria949Open in IMG/M
3300010861|Ga0126349_1052890Not Available851Open in IMG/M
3300010862|Ga0126348_1305620Not Available626Open in IMG/M
3300011120|Ga0150983_11065690All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81838Open in IMG/M
3300011120|Ga0150983_12232180All Organisms → cellular organisms → Bacteria1384Open in IMG/M
3300011120|Ga0150983_13377471All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811768Open in IMG/M
3300012198|Ga0137364_10699459Not Available765Open in IMG/M
3300012202|Ga0137363_11169845All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales654Open in IMG/M
3300012363|Ga0137390_11786446Not Available547Open in IMG/M
3300012364|Ga0134027_1127764All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81813Open in IMG/M
3300012371|Ga0134022_1135051All Organisms → cellular organisms → Bacteria → Proteobacteria1005Open in IMG/M
3300012374|Ga0134039_1078920All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300012382|Ga0134038_1278166All Organisms → cellular organisms → Bacteria1225Open in IMG/M
3300012384|Ga0134036_1063702Not Available733Open in IMG/M
3300012385|Ga0134023_1112432Not Available566Open in IMG/M
3300012386|Ga0134046_1132858Not Available598Open in IMG/M
3300012387|Ga0134030_1220957Not Available658Open in IMG/M
3300012388|Ga0134031_1087036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811107Open in IMG/M
3300012389|Ga0134040_1146119All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81804Open in IMG/M
3300012391|Ga0134035_1060765All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales591Open in IMG/M
3300012393|Ga0134052_1271011All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300012396|Ga0134057_1041095All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales707Open in IMG/M
3300012405|Ga0134041_1424999Not Available646Open in IMG/M
3300012971|Ga0126369_10291886All Organisms → cellular organisms → Bacteria1627Open in IMG/M
3300012971|Ga0126369_12762469Not Available574Open in IMG/M
3300018482|Ga0066669_11313938Not Available654Open in IMG/M
3300018482|Ga0066669_11474798Not Available617Open in IMG/M
3300021170|Ga0210400_10088895All Organisms → cellular organisms → Bacteria → Proteobacteria2435Open in IMG/M
3300021178|Ga0210408_10459463All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811013Open in IMG/M
3300021286|Ga0179583_1042661All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300021315|Ga0179958_1122199Not Available655Open in IMG/M
3300021358|Ga0213873_10190517Not Available633Open in IMG/M
3300021401|Ga0210393_10123483All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri2071Open in IMG/M
3300021405|Ga0210387_10565785All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811010Open in IMG/M
3300021432|Ga0210384_10674390All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81926Open in IMG/M
3300021474|Ga0210390_10326743All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811299Open in IMG/M
3300021475|Ga0210392_11159372Not Available579Open in IMG/M
3300021559|Ga0210409_11158223Not Available648Open in IMG/M
3300021560|Ga0126371_13137774Not Available559Open in IMG/M
3300022498|Ga0242644_1019690Not Available669Open in IMG/M
3300022504|Ga0242642_1003457All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811679Open in IMG/M
3300022507|Ga0222729_1059105All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300022508|Ga0222728_1079793Not Available593Open in IMG/M
3300022509|Ga0242649_1035031Not Available659Open in IMG/M
3300022510|Ga0242652_1000792All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 812022Open in IMG/M
3300022512|Ga0242676_1000584Not Available2002Open in IMG/M
3300022523|Ga0242663_1090946Not Available596Open in IMG/M
3300022527|Ga0242664_1000584Not Available3017Open in IMG/M
3300022530|Ga0242658_1006075All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811773Open in IMG/M
3300022530|Ga0242658_1152939Not Available596Open in IMG/M
3300022531|Ga0242660_1149883All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81610Open in IMG/M
3300022533|Ga0242662_10084214All Organisms → cellular organisms → Bacteria → Proteobacteria882Open in IMG/M
3300022533|Ga0242662_10295298All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales539Open in IMG/M
3300022708|Ga0242670_1015515All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81856Open in IMG/M
3300022709|Ga0222756_1041042All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales669Open in IMG/M
3300022713|Ga0242677_1067348All Organisms → cellular organisms → Bacteria → Proteobacteria556Open in IMG/M
3300022716|Ga0242673_1088154Not Available583Open in IMG/M
3300022718|Ga0242675_1094846All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales567Open in IMG/M
3300022720|Ga0242672_1040396All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales749Open in IMG/M
3300022720|Ga0242672_1096105All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales574Open in IMG/M
3300022722|Ga0242657_1005297Not Available1939Open in IMG/M
3300022726|Ga0242654_10040844All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811266Open in IMG/M
3300025928|Ga0207700_11498744Not Available598Open in IMG/M
3300026552|Ga0209577_10077799Not Available2733Open in IMG/M
3300026999|Ga0207949_1017836Not Available647Open in IMG/M
3300027516|Ga0207761_1115287Not Available523Open in IMG/M
3300027884|Ga0209275_10156738All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811210Open in IMG/M
3300029701|Ga0222748_1001711All Organisms → cellular organisms → Bacteria2102Open in IMG/M
3300029701|Ga0222748_1021878All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81939Open in IMG/M
3300030829|Ga0308203_1021503All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81842Open in IMG/M
3300030902|Ga0308202_1003457Not Available1808Open in IMG/M
3300030902|Ga0308202_1007178All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811450Open in IMG/M
3300030902|Ga0308202_1094325Not Available610Open in IMG/M
3300030905|Ga0308200_1051136All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales773Open in IMG/M
3300030990|Ga0308178_1039702Not Available840Open in IMG/M
3300031015|Ga0138298_1176928Not Available567Open in IMG/M
3300031023|Ga0073998_11369637All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales523Open in IMG/M
3300031057|Ga0170834_103001333All Organisms → cellular organisms → Bacteria → Proteobacteria1109Open in IMG/M
3300031057|Ga0170834_114077522All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales701Open in IMG/M
3300031058|Ga0308189_10012058Not Available1826Open in IMG/M
3300031058|Ga0308189_10213303All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales707Open in IMG/M
3300031082|Ga0308192_1071694All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales553Open in IMG/M
3300031091|Ga0308201_10104384Not Available824Open in IMG/M
3300031092|Ga0308204_10016934All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811443Open in IMG/M
3300031092|Ga0308204_10027951All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811226Open in IMG/M
3300031093|Ga0308197_10184003Not Available698Open in IMG/M
3300031098|Ga0308191_1032227Not Available561Open in IMG/M
3300031421|Ga0308194_10008344All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811886Open in IMG/M
3300031446|Ga0170820_16075246All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811300Open in IMG/M
3300031469|Ga0170819_11600297All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales560Open in IMG/M
3300031474|Ga0170818_112276640All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81778Open in IMG/M
3300031573|Ga0310915_10280602All Organisms → cellular organisms → Bacteria1175Open in IMG/M
3300031708|Ga0310686_115216232All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales771Open in IMG/M
3300031723|Ga0318493_10067412Not Available1737Open in IMG/M
3300031748|Ga0318492_10110178All Organisms → cellular organisms → Bacteria1360Open in IMG/M
3300031771|Ga0318546_10377067All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300031780|Ga0318508_1041876All Organisms → cellular organisms → Bacteria1191Open in IMG/M
3300031782|Ga0318552_10668269Not Available530Open in IMG/M
3300031845|Ga0318511_10331892All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300031879|Ga0306919_11532959Not Available501Open in IMG/M
3300031896|Ga0318551_10451395All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300032035|Ga0310911_10149813All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811312Open in IMG/M
3300032064|Ga0318510_10063129All Organisms → cellular organisms → Bacteria1341Open in IMG/M
3300032205|Ga0307472_100756369Not Available882Open in IMG/M
3300032515|Ga0348332_10692801All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81882Open in IMG/M
3300034644|Ga0370548_006869All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811443Open in IMG/M
3300034681|Ga0370546_022394Not Available848Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil31.25%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil16.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.50%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.56%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.86%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.17%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.47%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.78%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil2.78%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil2.08%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.08%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.39%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.39%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.69%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.69%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.69%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.69%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.69%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.69%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.69%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300002681Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF120 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300003368Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004120Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010072Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010079Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010090Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010098Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010099Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010100Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010118Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010121Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010139Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010141Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010145Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010152Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010856Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010861Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010862Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012371Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012374Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012382Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012384Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012385Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012386Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012387Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012388Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012389Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012391Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012393Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012405Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021286Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021315Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021358Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3Host-AssociatedOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022498Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022504Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022507Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022509Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022510Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022512Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022527Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022530Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022708Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022709Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022713Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022716Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022718Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022720Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026999Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)EnvironmentalOpen in IMG/M
3300027516Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030829Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031015Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031023Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031082Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031098Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_186 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300034644Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034681Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12627J18819_1038321913300001867Forest SoilLLPSVDTTFLARCSDPSSTRKEWFRVTRMLMGGDRCALAEATNDLISDVSLENWERLLAARERVLGEGPFGEDEM*
Ga0005471J37259_11109113300002681Forest SoilVERLLLRSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGEDET*
JGI26340J50214_1018151013300003368Bog Forest SoilDTTFLVRCPDPISARKEWVRVNRMLTGGDRRALAEATDDLISDVSSDSWERFLAARDRVSRDSSRDEDEA*
Ga0062384_10122381313300004082Bog Forest SoilPSVDTTFLVRCSDPISAREEWVRVTRMLTGGDRCALAEATDNLISDICPESWEQFLAARERALHEGSRGDDET*
Ga0058901_155274223300004120Forest SoilTVERLLLPSVDTTFLVRCSDPISARKEWVHITRMLTGGDRCALAEATDDLISDICPESWERFLAARERALQEGSRGEDET*
Ga0066679_1027413723300005176SoilDAAGSGLDAHALQQHLVKNGLAATVERLVLPTVDTTFLVRCSDPVSARKEWARVIRMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGLRGEDET*
Ga0066388_10278625513300005332Tropical Forest SoilSLRRRILDLFVGEPGLDARALQQHFVQNGLAATVEKLLLPSVDTTFLAQCSDATATRRKWADVISTLRGDHRCALAEATNDLISDVSSESWERFLAAREMLLRDDPGGED*
Ga0008090_1541532423300005363Tropical Rainforest SoilDALQQHLVKNGLAATVERLLLPSVDTTFLVRCCDPLSARKEWIRVTRMLSGGDRCVLAEATDKLISDVCPESWERFLAARERVLQEGAQGEDET*
Ga0070714_10067415823300005435Agricultural SoilAAESGLDAQALQQHLVKNGLAATVDRLLLPSVDTTFLVRCSDPISARKEWVRVTRTLTGGDRCALAEATDYLVSDLCPESWERFLAARERILHEGSRGEDEI*
Ga0070710_1013131313300005437Corn, Switchgrass And Miscanthus RhizosphereAESGLDAQALQQHLVKNGLAATVDRLLLPSVDTTFLVRCSDPISARKEWVRVTRTLTGGDRCALAEATDYLVSDLCPESWERFLAARERILHEGSRGEDEI*
Ga0070710_1104715323300005437Corn, Switchgrass And Miscanthus RhizosphereFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGDDEF*
Ga0066687_1099584913300005454SoilRALQQHLVQSGLAATVDGLLLPSVDTTFLARCSDPVSTRREWVRVAGMLKGGDRCALAGAMNDLISDPSPETWGRFIAARERALDEGPAGEDQI*
Ga0070699_10052369813300005518Corn, Switchgrass And Miscanthus RhizospherePPGLDARALQQHLVQNGLAATVDGLLLPSVDTIFLARCSDPSSTRREWVRATRMLTGGERCALAEAANDLISDVSSESWERFLAARQRTLHEGPVGEDQT*
Ga0066693_1036252513300005566SoilNGLAATVERLVLPTVDTTFLVRCSDPVSARKEWARVIRMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET*
Ga0066654_1046419413300005587SoilLVRCSDPISARAEWVRVIRMLTGGDRCALAEATDDLISDICPESWERFLAARESALHEGSLGDDET*
Ga0066652_10025286623300006046SoilLDAHALQQHLVENGLAATVERLLLPSVDTTFLVRCSDPVSARKEWARVIGMLTGGDRCALAEATDDLISDICPESWDRFLAARERALHEGSRGEDET*
Ga0066710_10233988713300009012Grasslands SoilGSGLDARAFQQHLVENGLAATVERLLLLSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGLRGEDET
Ga0099792_1056793623300009143Vadose Zone SoilGESGLDAHAFQQHLVKTGLAATVEKLLLPSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET*
Ga0126374_1166452613300009792Tropical Forest SoilSLGLDAQALRQHLVQNGLAATVDGLLLPSVDTIFLARCADPSSTRKEWVRVTRMLTGGERCALAEAANDLISGISSESWERFLAARERTLREDPGGDGQT*
Ga0126382_1158552413300010047Tropical Forest SoilRSLQQHLVENGQGATVERLLLPSVDTTFLVRCSDPTTARKEWVGVTRALTGDDRCALTEATNRLIGDLSSENWERFLAAREKALHQGSVDEDKT*
Ga0127428_15702813300010072Grasslands SoilVERLLLLSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWDRFLAARERALHEGSRGEDET*
Ga0127436_16256313300010079Grasslands SoilLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISEICPESWDRFLAARERALHEGSRGEDET*
Ga0127471_102298123300010090Grasslands SoilERLLLLSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET*
Ga0127463_103786413300010098Grasslands SoilLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFVAARERALHEGAQGDDET*
Ga0127450_100459123300010099Grasslands SoilTVEKLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLIARERALHEGSRGEDET*
Ga0127440_110829713300010100Grasslands SoilTVERLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGLRGEDET*
Ga0127465_112689523300010118Grasslands SoilEKLLLPSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET*
Ga0127438_107714823300010121Grasslands SoilERLLLPSVDTTFLVRCSDPISVREEWVRVNRMLTGGDRCALAEATNDLISDICPESWERFLAARERVLHEGSRSEDEI*
Ga0127464_100318423300010139Grasslands SoilERLLLLSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLIARERALHEGSPGEDET*
Ga0127499_115989313300010141Grasslands SoilSTVEKLLLPSVDTTFLVRCSDPISARKEWVRVVRMLTGGDRCALAEATDDLISDICPESWERFLIARERALHEGSPGEDET*
Ga0126321_112192713300010145SoilVDGLLAPSVDTTFLVRCFDPTSTRKEWVRVTGMLTEGVNNFLAEATNDLISDISSDNWERFLAAREQALRVDSVGEDEI*
Ga0126318_1089946413300010152SoilTVERLLLPSVDTTFLVRCSDPISARKEWDCVARMLSGGNRCALAEATDDLISDVCSESWERFLAARERVPLEGWRDEDDS*
Ga0127503_1129144113300010154SoilERLLLPSVHATFLIGCADPASTRKQWVGITGMLMAGDRCALAEATNDLISDLSPESWERFQAAMEKAREGPVSEDQV*
Ga0126378_1021335913300010361Tropical Forest SoilGSGLDAGVLQQHLVENGLAATVERLLLPSVDATFLVRCCDPVSARTEWGRVTRMLTGGDRCVLAEATDDLISDVCPESWERFLAARERVLEEGAQGEDET*
Ga0126377_1189837713300010362Tropical Forest SoilGLDARALQQHFVQNGLAATVEKLLLPSVDTTFLAQCSDATATRRKWADVISTLRGDHRCALAEATNDLISDVSSESWERFLAAREMLLRDDPGGED*
Ga0126381_10350243423300010376Tropical Forest SoilLPSVDATFLVRCCDPVSARKEWARVTRMLTGGDRCVLAEATDDLISDVCPESWERFLAARERVLEEGAQGEDET*
Ga0126358_108895413300010856Boreal Forest SoilIVDGLLVPSVDTIFLVRCSDLISTRMEWVRIAGMLTGGDRCALAEATNDLISDVSSGSWERFLAARERALHEGSVGEDQT*
Ga0126358_123763523300010856Boreal Forest SoilTVEKLLLPSVDTTFLVRCSDPISARKEWVRLTGMLTGGDRCALAEATDDLISDICPESWERFLIARERALHEGSRGEDET*
Ga0126349_105289023300010861Boreal Forest SoilAIVDGLLVPSVDTIFLVRCSDLISTRMEWVRIAGMLTGGDRCALAEATNDLISDVSSGSWERFLAARERALHEGSVGEDQT*
Ga0126348_130562023300010862Boreal Forest SoilVDGLLVPSVDTNFLARQCSDPISTRTEWVRSARILTGGDRCALAEATNDLIGDVSLERWELFQAALERVLHEGPVGEDQT*
Ga0150983_1106569013300011120Forest SoilVERLLLPSVDTTFLVRCSDPISARKEWVHITRMLTGGDRCALAEATDDLISDICPESWERFLAARERALQEGSRGEDET*
Ga0150983_1223218013300011120Forest SoilTVERLLFPSVDTTFLVRCSDPVSARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLGARERALHEGSRGDDEF*
Ga0150983_1337747123300011120Forest SoilTVDRLLLPSVDTTFLVRCSDPISARKEWVRVTRTLTGGDRCALAEATDYLVSDVCPESWERFLAARERILHEGSRGEDEI*
Ga0137364_1069945913300012198Vadose Zone SoilTFLVRCSDPVSARKEWVRVTGMLTGGNRCVLAEATDDLISDVSPESWERFLAARERVLHEGSQGEDET*
Ga0137363_1116984523300012202Vadose Zone SoilVRCSDPISTREEWVRATGMLTGVDRCALAEAVNELISDVSSESWERLLAARERALHEGPVGENQT*
Ga0137390_1178644623300012363Vadose Zone SoilLPLGLDARALQQHLVKNGLAATVDSLLLPSVDTIFLTRCSDPISTRKEWVRVIRMLTGGNRCALAEATNDLISDISSESWERFLAARERALHEGPAGEDQT*
Ga0134027_112776423300012364Grasslands SoilVEKLLLPSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDICPESWERFLIARERALHEGSRGEDQT*
Ga0134022_113505113300012371Grasslands SoilEKLLLPSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDICPESWDRFLAARERALHEGSRGEDET*
Ga0134039_107892023300012374Grasslands SoilLLLPSVDTAFLVRCPDPISARKEWVRLNRMLTGGDRRALAEATDDLISDTCPESWERFLIARERALHEGLRGEDET*
Ga0134038_127816623300012382Grasslands SoilERLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET*
Ga0134036_106370213300012384Grasslands SoilLDAGGSGLDARAFQQHLVENGLAATVERLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAESTDDLISDICPESWERFLIARERALHEGLRGEDET*
Ga0134023_111243213300012385Grasslands SoilTTFLVRCSDPVSARKEWARVIGMLTGGDRCALAEATDDLISDICPESWERFLIARERALHEGSRGEDET*
Ga0134046_113285823300012386Grasslands SoilERLLLLSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET*
Ga0134030_122095713300012387Grasslands SoilEKLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET*
Ga0134031_108703623300012388Grasslands SoilVERLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET*
Ga0134040_114611923300012389Grasslands SoilERLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEAADDLISDTCPESWERFLIARERALHEGSRGEDET*
Ga0134035_106076523300012391Grasslands SoilLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET*
Ga0134052_127101123300012393Grasslands SoilDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET*
Ga0134057_104109513300012396Grasslands SoilNGLAATVERLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISEICPESWERFLIARERALHEGSRGEDET*
Ga0134041_142499923300012405Grasslands SoilLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET*
Ga0126369_1029188623300012971Tropical Forest SoilATVERLLLPSVDTTFLVRCSDPTTARKEWVGVTRALTGDDRCALTEATNRLIGDLSSENWERFLAAREKALHQGSVDEDQT*
Ga0126369_1276246913300012971Tropical Forest SoilQILELDAAGSGLDAHALQQHLVQNGLAATVERLLLPSVDNMFLVRCSDPFLARKEWVRVTRMLSGGDRCVLAEAADDLINDVSHESWERFLATRESVLNEGSAGEDET*
Ga0066669_1131393813300018482Grasslands SoilFQQHLVENGLAATVERLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGLRGEDET
Ga0066669_1147479813300018482Grasslands SoilFQQHLVENGLAATVERLLLPSVDTTFLVRCSDPISARKEWVRATGMLTGGDRCALAEATDDLISDICPESWERFLAARERVLHEGSRGEDEI
Ga0210400_1008889513300021170SoilFQQHLVENGLAATVERLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISGICPESWERFLAARERALHEGSRGEDET
Ga0210408_1045946313300021178SoilLVENGLAATVERLLLPSVDTTFLVRCSDPISARKEWVHITRMLTGGDRCALAEATDDLISDICPESWERFLAARERALQEGSRGEDET
Ga0179583_104266113300021286Vadose Zone SoilATVEKLLLPSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET
Ga0179958_112219923300021315Vadose Zone SoilEKLLLPSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGDDET
Ga0213873_1019051723300021358RhizosphereAALSGLDAHALQQHLVQNGLAATVERLLLPSVDTTFLVRCSDPISARKEWVRITRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGDDET
Ga0210393_1012348323300021401SoilILELGAIGSGLDAHAIQQHLVKNGLAATVERLLLRSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGDDEF
Ga0210387_1056578523300021405SoilFLLRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGDDES
Ga0210384_1067439023300021432SoilLRSGLDARVLQQHLVQNGLAATVEKLLLPSVHATFLVRCADPASTREEWLRITGMLMGGDRCALAEATNDLVSDLSSESWERFQAAMEKALREGPVSEDQV
Ga0210390_1032674323300021474SoilVSGLDAHAFQQHLVENGLAATVERLLLPSVDTTFLVRCSDPISARKEWVHITRMLTGGDRCALAEATDDLISDICPESWERFLAARERALQEGSRGEDET
Ga0210392_1115937213300021475SoilRILELDAAESGLDAQALQQHLVKNGLAATVDRLLLPSVDTTFLVRCSDPISARKEWVRVTRTLTGGDRCALAEATDYLVSDVCPESWERFLAARERILHEGSRGEDEI
Ga0210409_1115822323300021559SoilRQILELGAIGSGLDAHAIQQHLVKNGLAATVERLLLRSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGDDES
Ga0126371_1313777413300021560Tropical Forest SoilLILELDAAESGLDAHMLQQHLVKNGLAATVERLLLPSVDTTFLVRCSDPASARKEWVRVTRMLTGGDRCALAEATNDLIGEVCPESWERFLAARARVVLEGSEGDDET
Ga0242644_101969013300022498SoilATVERLLLPSVDTTFLVRCSDPISTRKEWVRVTRMLTGGDRCALAEATDDLISGICPESWERFLAARERALHEGSRGEDET
Ga0242642_100345713300022504SoilVDRLLLPSVDTTFLVRCSDPISARKEWVRVTRTLTGGDRCALAEATDYLVSDVCPESWERFLAARERILHEGSRGEDEI
Ga0222729_105910523300022507SoilEKLLLPSVHATFLVRCADPASTREEWLRITGMLMGGDRCALAEATNDLVSDLSSESWERFQAAMEKALREGPVSEDQV
Ga0222728_107979323300022508SoilLLVPSVDTIFLVRCSDLISTRMEWVRIAGMLTGGDRCALAEATNDLISDVSLESWERSLVARERALHEGPVRDDQT
Ga0242649_103503123300022509SoilGLDAHAFQQHLVENGLAATVERLLLPSVDTTFLVRCSDPISARKEWVHITRMLTGGDRCALAEATDDLISDICPESWERFLAARERALQEGSRGEDET
Ga0242652_100079213300022510SoilNGLAATVERLLLRSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGDDES
Ga0242676_100058413300022512SoilGSGLDAHAFQQHLVENGLAATVERLLLPSVDTTFLVRCSDPISARKEWVHITRMLTGGDRCALAEATDDLISDICPESWERFLAARERALQEGSRGEDET
Ga0242663_109094613300022523SoilHAFQQHLVENGLAATVERLLLPSVDTTFLVRCSDPISARKEWVHITRMLTGGDRCALAEATDDLISDICPESWERFLAARERALQEGSRGEDET
Ga0242664_100058413300022527SoilLLLPSVDTTFLVRCSDPISARKEWVHITRMLTGGDRCALAEATDDLISDICPESWERFLAARERALQEGSRGEDET
Ga0242658_100607523300022530SoilQILELDAAGSGLDAHAFQQHLVENGLAATVERLLLPSVDTTFLVRCSDPISARKEWVHITRMLTGGDRCALAEATDDLISDICPESWERFLAARERALQEGSRGEDET
Ga0242658_115293913300022530SoilALQQHLVKNGLAATVDRLLLPSVDTTFLVRCSDPISARKEWVRVTRTLTGGDRCALAEATDYLVSDVCPESWERFLAARERILHEGSRGEDEI
Ga0242660_114988313300022531SoilTVDRLLLPSVDTTFLVRCSDPISARKEWVRVTRTLTGGDRCALAEATDYLVSDVCPESWERFLAARERILHEGSRGEDEI
Ga0242662_1008421413300022533SoilATVEKLLLPSVHATFLVRCADPASTREEWLRITGMLMGGDRCALAEATNDLVSDLSSESWERFQAAMEKALREGPVSEDQV
Ga0242662_1029529813300022533SoilVDRPLLPSVDTTFLVRCSDPISARKEWVRVTRTLTGGDRCALAEATDYLVSDVCPESWERFLAARERILHEGSRGEDEI
Ga0242670_101551523300022708SoilDAHAIQQHLVKNGLAATVERLLFPSVDTTFLVRCSDPVSVRKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLGARERALHEGSRGDDEF
Ga0222756_104104223300022709SoilVERLLLPSVDTTFLVRCSDPISTRKEWVRVTRMLTGGDRCALAEATDDLISGICPESWERFLAARERALHEGSRGEDET
Ga0242677_106734813300022713SoilATVERLLFPSVDTTFLVRCSDPVSVRKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLGARERALHEGSRGDDEF
Ga0242673_108815413300022716SoilRLLLPSVDTTFLVRCSDPISARKEWVHITRMLTGGDRCALAEATDDLISDICPESWERFLAARERALQEGSRGEDET
Ga0242675_109484623300022718SoilVERLLFPSVDTTFLVRCSDPVSVRKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLGARERALHEGSRGDDEF
Ga0242672_104039623300022720SoilGLAAIVDGLLVPSVDTIFLVRCSDPISTRMEWVRIAGMLMGGDRCALAEATNDLISDVSSGSWERFLAARERALHEGSVGEDQT
Ga0242672_109610513300022720SoilATVERLLLPSVDTTFLVRCSDPISAREEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLAARERALQEGSRGEDET
Ga0242657_100529713300022722SoilVERLLLPSVDTTFLVRCSDPISARKEWVHITRMLTGGDRCALAEATDDLISDICPESWERFLAARERALQEGSRGEDET
Ga0242654_1004084413300022726SoilAATVERLLLPSVDTTFLVRCSDPISARKEWVHITRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGEDET
Ga0207700_1149874423300025928Corn, Switchgrass And Miscanthus RhizosphereTVERLLLRSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGDDEF
Ga0209577_1007779933300026552SoilGSGLDAHAFQQHLVKNGLAATVERLLLPSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGLRGEDET
Ga0207949_101783623300026999Forest SoilDTTFLVRCSDPISTRKEWVRVTRMLTGGDRCALAEATDDLISGICPESWERFLAARERALHEGSRGEDET
Ga0207761_111528713300027516Tropical Forest SoilLAGLDARAIRQHLVKNGLAATVDGLLLPSVDTTFLARCSDPSSAHTEWGRIARMLMGGDRCALDEATSDLISDVSPENWDRFTAVRERILREGPFGEDQM
Ga0209275_1015673823300027884SoilLDAAVSGLDAHAFQQHLVENGLAATVERLLLPSVDTTFLVRCSDPVSARKEWVRVTRMLTGGDRCVLAEATDDLISDICPESWERFLAARERALHEGSRGDDEM
Ga0222748_100171133300029701SoilAHAFQQHLVENGLAATVERLLLPSVDTTFLVRCSDPISARKEWVHITRMLTGGDRCALAEATDDLISDICPESWERFLAARERALQEGSRGEDET
Ga0222748_102187823300029701SoilDRLLLPSVDTTFLVRCSDPISARKEWVRVTRTLTGGDRCALAEATDYLVSDVCPESWERFLAARERILHEGSRGEDEI
Ga0308203_102150323300030829SoilEKLLLPSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDTCPESWERFLAARERALHMESLGDDET
Ga0308202_100345723300030902SoilLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISEICPESWERFLAARERALHMESLGDDET
Ga0308202_100717813300030902SoilATVEKLLLPSVHATFLVRCADPASTREEWLRITGMLMGGDRCALAEATNDLISNLSSESWERFQAAMEKASREGPVSEDQA
Ga0308202_109432523300030902SoilLAATVDGLLLPSVDTIFLVRCSDPASTRNEWVRAAGMLTGGDRCALAEATNDLISDVSSESWERFLAAREQALHEDSAGEDHV
Ga0308200_105113613300030905SoilTVDGLLLPSVDTIFLVRCSDPASTRNEWVRAAGMLTGGDRCALAEATNDLISDVSSESWERFLAAREQALHEDSAGEDHV
Ga0308178_103970213300030990SoilVDGLLLPSVDTIFLVRCSDPASTRNEWVRAAGMLTGGDRCALAEATNDLISDVSSESWERFLAAREQALHEDSAGEDHV
Ga0138298_117692823300031015SoilAATVERLLLRSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGDDEF
Ga0073998_1136963723300031023SoilLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGEDET
Ga0170834_10300133313300031057Forest SoilTTFLVRCSDPISARNEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGDDEF
Ga0170834_11407752213300031057Forest SoilLLPSVDTTFLVRCPDPISARKEWVRVNRMLTGGDRRALAEAADDLISDVSSESWERFLAARERASHDGSRDEDEA
Ga0308189_1001205823300031058SoilGLLLPSVDTIFLVRCSDPASTRNEWVRAAGMLTGGDRCALAEATNDLISDVSSESWERFLAAREQALHEDSAGEDHV
Ga0308189_1021330313300031058SoilATVEKLLLPSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDICPESWERFLIARERALHEGSRGEDET
Ga0308192_107169423300031082SoilGLDAHAFQQHLVKNGLAATVEKLLLPSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET
Ga0308201_1010438423300031091SoilATVDGLLLPSVDTIFLVRCSDPASTRNEWVRAAGMLTGGDRCALAEATNDLISDVSSESWERFLAAREQALHEDSAGEDHV
Ga0308204_1001693423300031092SoilLLLPSVDTTFLVRCSDPVSTRREWVRVAGMLTGGDRCALAGAMNDLISDLSPETWGRFIAARERALDEGPADEDQI
Ga0308204_1002795113300031092SoilKNGLAATVEKLLLPSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET
Ga0308197_1018400323300031093SoilAGGSGLDAHAFQQHLVKNGLAATVEKLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET
Ga0308191_103222723300031098SoilERLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET
Ga0308194_1000834413300031421SoilTVEKLLLPSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET
Ga0170820_1607524613300031446Forest SoilRLDAAESGLDARTLQQHLHQKGLAATVESLLLPSVDTTFLVRCPDPLSARKEWVRVNRMLTGGDRRALAEAADDLISDVSSESWERFLAARERASHDGSRDEDEA
Ga0170819_1160029723300031469Forest SoilLLLPSVDTTFLVRCPDPISARKEWVRVNRMLTGGDRRALAEAADDLISDVSSESWERFLAARERASHDGSRDEDEA
Ga0170818_11227664023300031474Forest SoilPSVDTTFLVRCSDPISARKEWVRMIRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGEDET
Ga0310915_1028060213300031573SoilLVENGLAATAERLLLPSVDATFLVRCSDPVSARKEWVRVTRMLTGGDRWFLAEATDDLISDVCPESWERFLAARERVLEEGAQGEDET
Ga0310686_11521623213300031708SoilELDAAGSGLDAHAFQQHLVKNGLAATVERLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGEDET
Ga0318493_1006741223300031723SoilVENGQGAAVERLLLSSVDTTFLVRCSDPTAARKEWVSVTRMLTGDNRCALTEATNRLIGDLSSENWERFLAAREKALHQGSVDEDQT
Ga0318492_1011017823300031748SoilELASLRGQILQAAASKPGLDARALQQHLVENGQGAAVERLLLSSVDTTFLVRCSDPTAARKEWVSVTRMLTGDNRCALTEATNRLIGDLSSENWERFLAAREKALHQGSVDEDQT
Ga0318546_1037706723300031771SoilATAERLLLPSVDATFLVRCSDPVSARKEWVRVTRMLTGGDRCVLAEATDDLISDVCPESWERFLAARERVLEEGAQGEDET
Ga0318508_104187613300031780SoilKPGLDARALQQHLVESGQGATVERLLLPSVDTTFLVRCSDPTAARKEWVSVTRMLTGDNRCALTEATNRLIGDLSSENWERFLAAREKALHQGSVDEDQT
Ga0318552_1066826923300031782SoilATFLVRCSDPVSARKEWVRVTRMLTGGDRWFLAEATDDLISDVCPESWERFLAARERVLEEGAQGEDET
Ga0318511_1033189213300031845SoilAASKPGLDARALQQHLVENGQGAAVERLLLSSVDTTFLVRCSDPTAARKEWVSVTRMLTGDNRCALTEATNRLIGDLSSENWERFLAAREKALHQGSVDEDQT
Ga0306919_1153295923300031879SoilRCSDPVSARKEWVRVTRMLTGGDRWFLAEATDDLISDVCPESWERFLAARERVLEEGAQGEDET
Ga0318551_1045139523300031896SoilLRAAASKPGLDARALQQHLVESGQGATVERLLLPSVDTTFLVRCSDPTTARKEWVSVTRTLTGDDRCALTEATNRLIGDLSSENWERFLAAREIALHQGPVDEDQT
Ga0310911_1014981313300032035SoilFLVRCSDPTTARKEWVSVTRTLTGDDRCALTEATNRLIGDLSSENWERFLAAREIALHQGPVDEDQT
Ga0318510_1006312913300032064SoilSLRGQILQAAASKPGLDARALQQHLVENGQGAAVERLLLSSVDTTFLVRCSDPTAARKEWVSVTRTLTGDDRCALTEATNRLIGDLSSENWERFLAAREKALHQGSVDEDQT
Ga0307472_10075636913300032205Hardwood Forest SoilKNGLAATVDRLLLPSVDTTFLVRCSDPISARKEWVRVTRTLTGGDRCALAEATDYLVSDLCPESWERFLAARERILHEGSRGEDEI
Ga0348332_1069280123300032515Plant LitterVERLLLPSVDTTFLVRCSDPISARKEWVRVTRMLTGGDRCALAEATDDLISDICPESWERFLAARERALHEGSRGEDET
Ga0370548_006869_3_2753300034644SoilQHLVKNGLAATVEKLLLPSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET
Ga0370546_022394_6_2453300034681SoilVEKLLLPSVDTTFLVRCSDPISARKEWVRVTGMLTGGDRCALAEATDDLISDTCPESWERFLIARERALHEGSRGEDET


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.