Metagenome / Metatranscriptome Family F050556

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050556
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	56 residues
Representative Sequence	THPYWVRLCGSGSAVAAVYANEGLRDDAAMLLGEKHQRLIKTTTRAIAAPGPEPA
Number of Associated Samples	108
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.71 %
% of genes near scaffold ends (potentially truncated)	95.86 %
% of genes from short scaffolds (< 2000 bps)	84.14 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.931 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (28.276 % of family members)
Environment Ontology (ENVO)	Unclassified (62.069 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.897 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 16.87% β-sheet: 9.64% Coil/Unstructured: 73.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF03144	GTP_EFTU_D2	20.69
PF13704	Glyco_tranf_2_4	8.28
PF06537	DHOR	6.90
PF06037	DUF922	6.90
PF13578	Methyltransf_24	2.76
PF02596	DUF169	2.07
PF04011	LemA	0.69
PF14321	DUF4382	0.69
PF00127	Copper-bind	0.69
PF05015	HigB-like_toxin	0.69
PF08922	DUF1905	0.69
PF13715	CarbopepD_reg_2	0.69
PF03631	Virul_fac_BrkB	0.69
PF07676	PD40	0.69
PF00990	GGDEF	0.69
PF14326	DUF4384	0.69
PF00069	Pkinase	0.69
PF13147	Obsolete Pfam Family	0.69
PF02416	TatA_B_E	0.69
PF13492	GAF_3	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	6.90
COG5661	Predicted secreted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	6.90
COG5664	Predicted secreted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	6.90
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.76
COG2043	Uncharacterized conserved protein, DUF169 family	Function unknown [S]	2.07
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.69
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	0.69
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.69
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.93 %
Unclassified	root	N/A	22.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.93 %
Unclassified	root	N/A	22.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.93 %
Unclassified	root	N/A	22.07 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	31.03 %
Unclassified	root	N/A	22.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.28 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.28 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	31.03 %
Unclassified	root	N/A	22.07 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	8.28 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.07 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	17.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	8.28 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.38 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.07 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	15.86 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	7.59 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	2.07 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.38 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.07 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	15.86 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	7.59 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	2.07 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1.38 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.07 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	15.86 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	7.59 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	2.07 %
Nostoc	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	0.69 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.07 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	15.86 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	7.59 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	2.07 %
unclassified Nostoc	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc	0.69 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	0.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.07 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	15.86 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	7.59 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	2.07 %
Nostoc sp. PCC 7524	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. PCC 7524	0.69 %
Gemmatimonas sp. SM23_52	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp. SM23_52	0.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig11810	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300002560\|JGI25383J37093_10086011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	944	Open in IMG/M
3300002560\|JGI25383J37093_10089997	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300002561\|JGI25384J37096_10072126	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300002561\|JGI25384J37096_10078780	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300002561\|JGI25384J37096_10211803	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	567	Open in IMG/M
3300002562\|JGI25382J37095_10012601	All Organisms → cellular organisms → Bacteria	3196	Open in IMG/M
3300002562\|JGI25382J37095_10097920	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300002911\|JGI25390J43892_10081427	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005166\|Ga0066674_10440848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	596	Open in IMG/M
3300005167\|Ga0066672_10678686	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005167\|Ga0066672_10768646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	609	Open in IMG/M
3300005171\|Ga0066677_10723138	Not Available	555	Open in IMG/M
3300005172\|Ga0066683_10177868	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300005174\|Ga0066680_10256253	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1112	Open in IMG/M
3300005175\|Ga0066673_10672647	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300005178\|Ga0066688_10479126	Not Available	803	Open in IMG/M
3300005178\|Ga0066688_10507867	Not Available	776	Open in IMG/M
3300005180\|Ga0066685_10942755	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300005181\|Ga0066678_10169696	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300005186\|Ga0066676_10794214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	641	Open in IMG/M
3300005187\|Ga0066675_10761281	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	730	Open in IMG/M
3300005406\|Ga0070703_10036974	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300005445\|Ga0070708_100605194	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300005446\|Ga0066686_10478730	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	849	Open in IMG/M
3300005446\|Ga0066686_10566613	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	772	Open in IMG/M
3300005447\|Ga0066689_10019109	All Organisms → cellular organisms → Bacteria	3319	Open in IMG/M
3300005447\|Ga0066689_10182492	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300005447\|Ga0066689_10382205	Not Available	880	Open in IMG/M
3300005451\|Ga0066681_10412481	Not Available	830	Open in IMG/M
3300005451\|Ga0066681_10938831	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005471\|Ga0070698_101917894	Not Available	545	Open in IMG/M
3300005518\|Ga0070699_100434627	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300005540\|Ga0066697_10187071	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300005549\|Ga0070704_100356373	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300005553\|Ga0066695_10830661	Not Available	531	Open in IMG/M
3300005555\|Ga0066692_10999510	Not Available	512	Open in IMG/M
3300005569\|Ga0066705_10011807	All Organisms → cellular organisms → Bacteria → Proteobacteria	4195	Open in IMG/M
3300005569\|Ga0066705_10171761	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300005576\|Ga0066708_10033557	All Organisms → cellular organisms → Bacteria → Proteobacteria	2762	Open in IMG/M
3300005598\|Ga0066706_11432462	Not Available	521	Open in IMG/M
3300006034\|Ga0066656_10456000	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	832	Open in IMG/M
3300006034\|Ga0066656_10517024	Not Available	778	Open in IMG/M
3300006175\|Ga0070712_100316522	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1268	Open in IMG/M
3300006794\|Ga0066658_10278548	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300006796\|Ga0066665_10120462	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300006804\|Ga0079221_10198884	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1096	Open in IMG/M
3300006806\|Ga0079220_11254877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	617	Open in IMG/M
3300006914\|Ga0075436_100109157	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300009012\|Ga0066710_102482190	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300009012\|Ga0066710_102727031	Not Available	703	Open in IMG/M
3300009088\|Ga0099830_10486484	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300009088\|Ga0099830_11281134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	609	Open in IMG/M
3300009090\|Ga0099827_11183351	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	664	Open in IMG/M
3300010301\|Ga0134070_10421285	Not Available	530	Open in IMG/M
3300010304\|Ga0134088_10055427	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1826	Open in IMG/M
3300010304\|Ga0134088_10196064	Not Available	967	Open in IMG/M
3300010320\|Ga0134109_10059674	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1276	Open in IMG/M
3300010321\|Ga0134067_10169685	Not Available	787	Open in IMG/M
3300010329\|Ga0134111_10262028	Not Available	712	Open in IMG/M
3300010333\|Ga0134080_10003635	All Organisms → cellular organisms → Bacteria	5258	Open in IMG/M
3300010333\|Ga0134080_10170509	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300010333\|Ga0134080_10543537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	558	Open in IMG/M
3300010337\|Ga0134062_10022038	All Organisms → cellular organisms → Bacteria	2450	Open in IMG/M
3300010337\|Ga0134062_10091541	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300010401\|Ga0134121_12694243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	542	Open in IMG/M
3300012140\|Ga0137351_1055810	Not Available	562	Open in IMG/M
3300012198\|Ga0137364_10113958	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1920	Open in IMG/M
3300012198\|Ga0137364_10828967	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	699	Open in IMG/M
3300012199\|Ga0137383_10271032	All Organisms → cellular organisms → Bacteria → Proteobacteria	1243	Open in IMG/M
3300012201\|Ga0137365_10365087	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1066	Open in IMG/M
3300012201\|Ga0137365_10451367	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	946	Open in IMG/M
3300012201\|Ga0137365_10547688	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	849	Open in IMG/M
3300012202\|Ga0137363_10286271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1349	Open in IMG/M
3300012206\|Ga0137380_10643004	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	924	Open in IMG/M
3300012206\|Ga0137380_11333497	Not Available	602	Open in IMG/M
3300012209\|Ga0137379_10192366	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300012210\|Ga0137378_10734870	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	899	Open in IMG/M
3300012210\|Ga0137378_11074163	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	719	Open in IMG/M
3300012285\|Ga0137370_10489041	All Organisms → cellular organisms → Bacteria → Proteobacteria	752	Open in IMG/M
3300012349\|Ga0137387_10363711	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1048	Open in IMG/M
3300012350\|Ga0137372_10070445	All Organisms → cellular organisms → Bacteria	3012	Open in IMG/M
3300012357\|Ga0137384_10735744	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	800	Open in IMG/M
3300012363\|Ga0137390_10134880	All Organisms → cellular organisms → Bacteria	2449	Open in IMG/M
3300012363\|Ga0137390_10139349	All Organisms → cellular organisms → Bacteria	2407	Open in IMG/M
3300012387\|Ga0134030_1180672	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
3300012403\|Ga0134049_1116024	Not Available	540	Open in IMG/M
3300012918\|Ga0137396_10409869	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1005	Open in IMG/M
3300012922\|Ga0137394_11310949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	586	Open in IMG/M
3300012927\|Ga0137416_11069198	Not Available	723	Open in IMG/M
3300012927\|Ga0137416_11201996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	683	Open in IMG/M
3300012930\|Ga0137407_10526429	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1105	Open in IMG/M
3300012972\|Ga0134077_10365267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	617	Open in IMG/M
3300012976\|Ga0134076_10220424	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	801	Open in IMG/M
3300012977\|Ga0134087_10534472	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	596	Open in IMG/M
3300012977\|Ga0134087_10655237	Not Available	551	Open in IMG/M
3300014150\|Ga0134081_10096562	Not Available	927	Open in IMG/M
3300014157\|Ga0134078_10083954	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1165	Open in IMG/M
3300014157\|Ga0134078_10163631	Not Available	884	Open in IMG/M
3300015053\|Ga0137405_1430014	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4260	Open in IMG/M
3300015054\|Ga0137420_1313582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. PCC 7524	1345	Open in IMG/M
3300015356\|Ga0134073_10163625	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300017654\|Ga0134069_1187641	Not Available	702	Open in IMG/M
3300017656\|Ga0134112_10332611	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300017657\|Ga0134074_1061977	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1267	Open in IMG/M
3300018061\|Ga0184619_10188777	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300018431\|Ga0066655_10033888	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2514	Open in IMG/M
3300018431\|Ga0066655_10286616	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1068	Open in IMG/M
3300018433\|Ga0066667_11620237	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	577	Open in IMG/M
3300018433\|Ga0066667_11767676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	558	Open in IMG/M
3300018433\|Ga0066667_12176113	Not Available	515	Open in IMG/M
3300021046\|Ga0215015_10628652	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	586	Open in IMG/M
3300021073\|Ga0210378_10015781	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp. SM23_52	3094	Open in IMG/M
3300025910\|Ga0207684_10078207	All Organisms → cellular organisms → Bacteria	2813	Open in IMG/M
3300025922\|Ga0207646_10787636	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	847	Open in IMG/M
3300026277\|Ga0209350_1030389	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1615	Open in IMG/M
3300026296\|Ga0209235_1057568	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300026296\|Ga0209235_1139602	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	985	Open in IMG/M
3300026297\|Ga0209237_1012339	All Organisms → cellular organisms → Bacteria	5057	Open in IMG/M
3300026297\|Ga0209237_1200079	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300026298\|Ga0209236_1056903	All Organisms → cellular organisms → Bacteria	1918	Open in IMG/M
3300026300\|Ga0209027_1142132	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300026306\|Ga0209468_1149928	Not Available	612	Open in IMG/M
3300026313\|Ga0209761_1197905	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300026314\|Ga0209268_1007707	All Organisms → cellular organisms → Bacteria → Proteobacteria	4528	Open in IMG/M
3300026317\|Ga0209154_1242700	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300026318\|Ga0209471_1003329	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	9073	Open in IMG/M
3300026323\|Ga0209472_1138532	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	931	Open in IMG/M
3300026326\|Ga0209801_1115793	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1151	Open in IMG/M
3300026326\|Ga0209801_1361473	Not Available	511	Open in IMG/M
3300026332\|Ga0209803_1154583	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	885	Open in IMG/M
3300026332\|Ga0209803_1280190	Not Available	571	Open in IMG/M
3300026335\|Ga0209804_1343341	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	502	Open in IMG/M
3300026343\|Ga0209159_1201371	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	639	Open in IMG/M
3300027862\|Ga0209701_10351073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	835	Open in IMG/M
3300027903\|Ga0209488_10331698	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300031226\|Ga0307497_10466920	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300031720\|Ga0307469_10052677	All Organisms → cellular organisms → Bacteria	2569	Open in IMG/M
3300031965\|Ga0326597_10852440	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	938	Open in IMG/M
3300034090\|Ga0326723_0022209	All Organisms → cellular organisms → Bacteria	2597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.31%
Host-Associated	Host-Associated	0.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.24%
Aquatic	Environmental → Aquatic	2.07%
Plants	Host-Associated → Plants	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.55%
Sediment	Environmental → Aquatic → Sediment	1.38%
Freshwater	Environmental → Aquatic → Freshwater	0.69%
Peat	Environmental → Terrestrial → Peat	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.66%
Loam	Environmental → Terrestrial → Soil → Loam	6.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	44.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	17.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	15.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.38%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.69%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.69%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012140	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT690_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012387	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_01052910	2124908043	Soil	SGSAVAAVYASEQVRDDAAMQLGTQHQQLVKTSTRALVAPGPEPHTS
JGI25383J37093_100860111	3300002560	Grasslands Soil	KHPALRTLYEKLAQTHPLWVRLCGSGSAVAAVYSSERLRDDAAMVLGEKSQRLLRVATRASPAPGPEPA*
JGI25383J37093_100899972	3300002560	Grasslands Soil	WVRLCGSGSAVAAVYRSERDREDAAMMVGEKQQRLIRTMTRATPAAGPEPIAS*
JGI25384J37096_100721263	3300002561	Grasslands Soil	ATKPLWVRLCGSGSAVAAVYRSERDREDAAMMLGEKQQRLIRTMTRATPAAGPEPLAS*
JGI25384J37096_100787802	3300002561	Grasslands Soil	AATKPLWVRLCGSGSAVAAVYRSERDREDAAMMVGEKQQRLIRTMTRATPAAGPEPIAS*
JGI25384J37096_102118032	3300002561	Grasslands Soil	VFGKHPALRTLYEKLAQTHPLWVRLCGSGSAVAAVYSSERLRDDAAMVLGEKSQRLLRVATRASPAPGPEPA*
JGI25382J37095_100126011	3300002562	Grasslands Soil	AVAAVYANEALRDDAAMVLGEKHQRLIKTATRSLAAPGPEAA*
JGI25382J37095_100979201	3300002562	Grasslands Soil	WVRLCGSGSAVAAVYRSERDREDAAMMVGEKQQRLIRTTTRATPAARPEPLAA*
JGI25390J43892_100814271	3300002911	Grasslands Soil	AATHPYWVRLCGSGSAVAAVYSSERLRDDARMLLGEKQQQLIGTTTRAVPATGPGPLP*
Ga0066674_104408482	3300005166	Soil	VAAVYANAGLRDDAAMLLGEKHQRLIKTTTRAAAAPGPEPA*
Ga0066672_106786861	3300005167	Soil	PVFGKHPPLRALFERLAATHPYWVRLCGSGSAVAAVYASERLRDDARMQLGEKQQRLIDTATRAVPAGGPEPLP*
Ga0066672_107686462	3300005167	Soil	THPYWVRLCGSGSAVAAVYANERLRDEAMTQLGEKHQRLIGTATRAVAAPGPEPS*
Ga0066677_107231382	3300005171	Soil	APLRALYERLAATHPYWVRLCGSGSAVAAVYSSERLRDDARMLLGEKQQQLIGTTTRAVPATGPGPLP*
Ga0066683_101778684	3300005172	Soil	GTHPYWVRLCGSGSAVAAVYASERLRDDASMQLGEKQQRLIATTTRAVAAPGPEPLP*
Ga0066680_102562531	3300005174	Soil	WVRLCGSGSAVAAVYANDRLRDDARLVLGEKHQQLMSTLTRATAAPGPEPLP*
Ga0066673_106726473	3300005175	Soil	GSAVAAVYANPGLRDDAAMQLGARKQELIRTTTRAAPAPGPDPLPGE*
Ga0066688_104791263	3300005178	Soil	LYEKLAQTHPLWVRLCGSGSAVAAVYSSERLRDDAALVLGEKHQRLLRVATRASPAPGPEPT*
Ga0066688_105078673	3300005178	Soil	SGSAVAAVYASEALRDDAGMMLGEKRQRLLKTATRALPAPGPEPA*
Ga0066685_105998833	3300005180	Soil	WVRLCGSGSAVAAVYANERLRDDAAMMLGEKQQRLIKTTTHAAPAPRPEPNARSGGPASRGAI*
Ga0066685_109427552	3300005180	Soil	RLAQTHPYWVRLSGSGSAVAAVYASEALRDDAGMMLGEKRQRLLKTATRALPAPGPEPA*
Ga0066678_101696964	3300005181	Soil	PYWVRLCGSGSAVAAVYASERLRDDARMQLGEKQQQLIGTTTRAVPASGPEPLP*
Ga0066676_107942141	3300005186	Soil	SGSAVAAVYANAELRDDAAMVLGEKHQGLIKTATRAVAAPGPEPA*
Ga0066675_107612812	3300005187	Soil	FEIPVFGKHPPLRELFERLAQTHPYWVRLAGSGSTVAAVYASEALRDDAGMLLGEKRQRLLKTATRALPAPGPEPA*
Ga0070703_100369743	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VAAVYANEGLRDDAALVLGEKHQGLIKTTTRAAAAPGPEPA*
Ga0070708_1006051944	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	PYWVRLCGSGSAVAAVYADERRCDDAKLVLGEKQQRLIKTLTRASPPTGPERG*
Ga0066686_104787301	3300005446	Soil	THPYWVRLCGSGSAVAAVYANEGLRDDAAMLLGEKHQRLIKTTTRAVAAPGPERA*
Ga0066686_105666132	3300005446	Soil	YWVRLCGSGSAVAAVYANAVLRDDAAMLLGDKHQRLIKTTTRAAAAPGPEPA*
Ga0066689_100191095	3300005447	Soil	LCGSGSAVAAVYRSERDREDAAMMVGEKQQRLIRTMTRATPAAGPEPIAS*
Ga0066689_101824921	3300005447	Soil	LRDLYERLAQTHPLWVRLCGSGSAVAAVYANDRLRDDARLVLGEKHQQLMSTLTRATAAPGPEPLP*
Ga0066689_103822051	3300005447	Soil	WVRLCGSGSAVAAVYATAVLRDEAAMVLGEQHQRLIKTTTRAAAAPGPEPLP*
Ga0066681_104124811	3300005451	Soil	WVRLCGSGSAVAAVYANDGLRDDAAMLLGEKHQRLIKTTTRALPAPGPEPRVAGT*
Ga0066681_109388311	3300005451	Soil	EKLAQTHPLWVRLCGSGSAVAAVYATERLRDEAALVLGEKSQRLLRLATRGSPAPGPEPV
Ga0070698_1019178941	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	WVRLSGSGSAVAAVYASETLRDDAAMMLGEKRQRLIKTATRALPAPGPAPG*
Ga0070699_1004346272	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VRLCGSGSAVAGVYRSERDREDAAMMLGEKEQRLIRTMTRATPAAGPEPSDS*
Ga0066697_101870711	3300005540	Soil	WVRLCGSGSAVAAVYANERLRDDAAMMLGERQQRLVRTATCATPAAGPAPA*
Ga0070704_1003563731	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	PVFGKHPPLRALYERMAGTHPNWVRLCGSGSAVAAVYANEGLRDDAALVLGEKHQGLIKTTTRAAAAPGPEPA*
Ga0066695_108306612	3300005553	Soil	WVRLCGSGSAVAAVYANDGLRDDAAMLLGEQHQRMIKTTTRALPAPGPEPRVAGT*
Ga0066692_109995102	3300005555	Soil	YWVRLCGSGSAVAAVYANERLRDDAAMMLGERQQRLVRTATCATPAAGPAPA*
Ga0066705_100118071	3300005569	Soil	HPYWVRLCGSGSAVAAVYASERLRDDARMQLGERQQQLVGTITRAVPASGPEPLP*
Ga0066705_101717611	3300005569	Soil	PLRALFERLAATHPYWVRLCGSGSAVAAVYANERLRDEAMTQLGEKHQRLIGTATRAVAAPGPEPV*
Ga0066708_100335571	3300005576	Soil	AVAAVYANERLRDDAAMMLGERQQRLVRTATRATPAAGPAPA*
Ga0066706_114324621	3300005598	Soil	GTHPYWVRLCGSGSAVAAVYANERLRDDAAMMLGERQQRLVRTATCATPAAGPAPA*
Ga0066656_104560002	3300006034	Soil	RLCGSGSAVAAVYANAGLRDDAAMLLGEKHQRLIKTTTRVAAAPGPEPA*
Ga0066656_105170241	3300006034	Soil	YWVRLAGSGSTVAAVYASEALRDDAGMLLGEKRQRLLKTATRALPAPGPEPA*
Ga0070712_1003165222	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VFGKHPPLRALYERMAGTHPNWVRLCGSGSAVAAVYANEGLRDDAALLLGEKHQRLIKTTTRAAAAPGPEPA*
Ga0066658_102785484	3300006794	Soil	PYWVRLCGSGSAVAAVYASERLRDDARMQLGEKQQRLIDTATRAVPAGGPEPLP*
Ga0066665_101204621	3300006796	Soil	SGGAVAAVYSSERLRDDAAMMLGEKQQQLIKTSTRAAAAPGPEAQ*
Ga0079221_101988842	3300006804	Agricultural Soil	YWVRLCGSGSAVAAVYADDRRCEDARLVLGEKHQRLIKTLTLAAPPAGPTRV*
Ga0079220_112548771	3300006806	Agricultural Soil	LCGSGSAVAAVYANEGLRDDAAMVLGEKHQRLIKTATRSVAAAGPEAA*
Ga0075436_1001091573	3300006914	Populus Rhizosphere	RLCGSGSAVAAVYANARLRDDAAMVLGEKHQQLIKTDTRAVVAPGPEPA*
Ga0066710_1024821901	3300009012	Grasslands Soil	ATKPLWVRLCGSGSAVAAVYRSERDREDAAMMLGEKQQRLIRTMTRATPAAGPEPLAS
Ga0066710_1027270311	3300009012	Grasslands Soil	GNDFEIPVCGKHPPLRELFERLAQTRPYWVRLSGSGSAVAAVYASEALRDDAAMMLGEKRQRLIKTMTRALPAPGPEPG
Ga0099830_104864843	3300009088	Vadose Zone Soil	LCGSGSAVAAVYKNTRDRDDAATQMGTKQQQLLVTDTRAAPSPGPEPLAYTTKEAR*
Ga0099830_112811341	3300009088	Vadose Zone Soil	HPNWVRLCGSGSAVAAVYANEGLRDDAAMLLGEKHQRLIKTTTRAVTAPGPEPA*
Ga0099827_111833512	3300009090	Vadose Zone Soil	FERVAATGPYWVRLAGSGSAVAAGYKAERERDDAAAQLGRTRQQVIATVTRAAAAPGPEVF*
Ga0134070_104212852	3300010301	Grasslands Soil	VFGKHPALRDLYERLAQTHPLWVRLCGSGSAVAAVYANDRLRDDARLVLGEKHQQLMSTLTRATAAPGPEPLP*
Ga0134088_100554275	3300010304	Grasslands Soil	PLRELFERLAQTHPYWVRLAGSGSTVAAVYASEALRDDAGMLLGEKRQRLLKTATRALPAPGPEPA*
Ga0134088_101960644	3300010304	Grasslands Soil	CGSGSAVAAVYASEALRDDAAMVLGEQHQRLIKTTTRAAAAPGPEPLP*
Ga0134109_100596742	3300010320	Grasslands Soil	GSGSAVAAVYANAGLRDDAAMLLGEKHQRLIKTTTRAAAAPGPEPA*
Ga0134067_101696853	3300010321	Grasslands Soil	TVAAVYASEALRDDAGMLLGEKRQRLLKTATRALPAPGPEPA*
Ga0134064_104391033	3300010325	Grasslands Soil	ANEGLRDDAAMLLGEKHQRLIKTTTRALPAPGPEPRVAGT*
Ga0134111_102620283	3300010329	Grasslands Soil	YERLAQTHPLWVRLCGSGSAVAAVYANDRLRDDARLVLGEKHQQLMSTLTRATAAPGPERLP*
Ga0134080_100036351	3300010333	Grasslands Soil	LRTLYEKLAQTHPLWVRLCGSGSAVAAVYANPALRDDAALMLGEKQQQLIKTMTRAIPAPGPEPVP*
Ga0134080_101705092	3300010333	Grasslands Soil	VFGKHPPLRALFERLAATHPYWVRLCGSGSAVAAVYANERLRDEAMTQLGEKHQRLIGTATRAVAAPGPEPS*
Ga0134080_105435372	3300010333	Grasslands Soil	GTHPYWVRLCGSGSAVAAVYANAELRDDAAMVLGEKHQGLIKTATRAVAAPGPEPA*
Ga0134062_100220381	3300010337	Grasslands Soil	PLCGSGSAVAAVYANAGLRDDAAMLLGEKHQRLIKTTTRAAAAPGPEPA*
Ga0134062_100915411	3300010337	Grasslands Soil	LCGSGSAVAAVYASERLRDDARMQLGEKQQRLIDTATRAVPAGGPEPLP*
Ga0134121_126942431	3300010401	Terrestrial Soil	SAVAAVYANEGLRDDAAMVLGEKHQRLIETATRSVAAAGPEAA*
Ga0137351_10558103	3300012140	Soil	VGAVYATERLRDDAAMQLGTQHQQLVKTSTRTLAASGPETHTS*
Ga0137364_101139581	3300012198	Vadose Zone Soil	CGSGSAVAAVFANPGLRDDAAMQLGARKQELIRTTTRAAPAPGPDPLPGE*
Ga0137364_108289673	3300012198	Vadose Zone Soil	PYWVRLCGSGSAVAAVYANEGLRDDAALRLGGRKQELIRTSTQAAPAPGPEPAT*
Ga0137383_102710323	3300012199	Vadose Zone Soil	GLRALYEKLAQTHPYWVRLCGSGGAVAAVYASERLRDDAAMMLGEKQQQLIKTSTRAAAAPGPEAQ*
Ga0137365_103650871	3300012201	Vadose Zone Soil	PYWVRLCGSGSAVAAVYASERLRDDARMQLGERQQQLVGTITRAVPASGPEPLP*
Ga0137365_104513671	3300012201	Vadose Zone Soil	HPYWVRLCGSGSAVAAVYANAGLRDDAAMLLGEKHQRLIKTTTRAAAAPGPEPA*
Ga0137365_105476882	3300012201	Vadose Zone Soil	SGSAVAAVYANAGLRDDAAMVLGEKHQGLIKTATRAVAAPGPEPA*
Ga0137363_102862713	3300012202	Vadose Zone Soil	RLCGSGSAVAAVYANAALRDDAAMVLGEKHQRLIKTATRSVAAPGPEAG*
Ga0137380_106430041	3300012206	Vadose Zone Soil	HPSLRALFERLAATHPYWVRLCGSGSAVSAAYASERLRDEAAMMLEGKEQRLIKTTTRAVAAPPPARDIA*
Ga0137380_113334971	3300012206	Vadose Zone Soil	HPPLRELFERLAQTHPYWVRLSGSGSGVAAVYASEALRDDAGMMLGEKRQRLLKTTTRALPAPGPEPA*
Ga0137379_101923661	3300012209	Vadose Zone Soil	PYWVRLCGSGSAVAAAYASERLRDEAAMMLEGKEQRLIKTTTRAVAAPPPARDIA*
Ga0137378_107348701	3300012210	Vadose Zone Soil	GKHPALRTLYEKLAQTHPLWVRLCGSGSAVAAVYANPALRDDAALMLGEKQQQLIKTMTRAIPAPGPEPVP*
Ga0137378_110741631	3300012210	Vadose Zone Soil	LCGSGSAVAAVYANAGLRDDAAMLLGEKHQRLIKTTTRAAAAPGPEPA*
Ga0137370_104890411	3300012285	Vadose Zone Soil	RLAGTHPYWVRLCGSGSAVAAVYANERLRDDAAMMLGERQQRLVRTATCATPAAGPAPA*
Ga0137387_103637113	3300012349	Vadose Zone Soil	KHPPLRELFERLAQTHPYWVRLAGSGSAVAAVYASEALRDDAGMLLGEKRQRLLKTATRALPAPGPEPA*
Ga0137372_100704451	3300012350	Vadose Zone Soil	PYWVRLCGSGSAVAAVYANDGLRDDAAMLLGEKHQRLIETTTRAVAAPGPEPLP*
Ga0137369_109133681	3300012355	Vadose Zone Soil	AAVYANEGLRDDAAMLLGEKHQRLIKTATRAVAAPGPEPA*
Ga0137384_107357441	3300012357	Vadose Zone Soil	HPYWVRLCGSGSAVAAVYANAGLRDDAAMVLGEKHQGLINTATRAVAAPGPEPA*
Ga0137390_101348804	3300012363	Vadose Zone Soil	FERLAGTGPLWVRLCGSGSAVAAVYKSPRDRDAAAAALGSKTQRLFTTDTRGSPAPGPEALGQEPLGNGTD*
Ga0137390_101393496	3300012363	Vadose Zone Soil	AGTGPLWVRLCGSGSAVAAVYKSPRDRDAAAAALGSKAQQLFPTETRGTSAAGPESIP*
Ga0134030_11806721	3300012387	Grasslands Soil	LCGSGSAVAAIYATAALRDEAAMLLGERHQRLIKTTTRAAAAPGPEPLP*
Ga0134049_11160241	3300012403	Grasslands Soil	LWVRLCGSGSAVAAVYANDRLRDDARLVLGEKHQQLMSTLTRATAAPGPEPLP*
Ga0137396_104098691	3300012918	Vadose Zone Soil	RLCGSGSAVAAVYANEGLRDDAAMLLGEKHQQLIKTTTRAVAAPGPEPA*
Ga0137394_113109491	3300012922	Vadose Zone Soil	YWVRLCGSGSAVAAVYANAGLRDDAAMLLGENHQRLIKTATRAVAAPGAEPT*
Ga0137416_104537612	3300012927	Vadose Zone Soil	YANAALRDDAAMVLGEKHQRLIKTATRSVAAPGPEAV*
Ga0137416_110691983	3300012927	Vadose Zone Soil	ALRTLYEKLAQTHPLWVRLCGSGSAVAAVYSSERLRDDAALVLGEKHQRLLRVATRASPAPGPEPT*
Ga0137416_112019961	3300012927	Vadose Zone Soil	RLCGSGSAVAAVYANEGLRDDAALLLGEKHQRLIKTTTRAAAAPGPEPA*
Ga0137407_105264291	3300012930	Vadose Zone Soil	YWVRLCGSGSAVAAVYANAGLRDDAAMLLGEKHQRLIKTTTRAAAAPGPEPA*
Ga0134077_103652671	3300012972	Grasslands Soil	HPYWVRLCGSGSAVAAVYANAGLRDDAAMVLGEKHQRLIKTTTRAAAAPGPEPA*
Ga0134076_102204241	3300012976	Grasslands Soil	THPYWVRLCGSGSAVAAVYANEGLRDDAAMLLGEKHQRLIKTTTRAIAAPGPEPA*
Ga0134087_105344721	3300012977	Grasslands Soil	FGKHPALRTLYEKLAQTHPLWVRLCGSGSAVAAVYSSERLRDDAAMVLGEKSQRLLRVATRASPAPGPEPA*
Ga0134087_106552372	3300012977	Grasslands Soil	AQTHPYWVRLCGSGGALAAVYSSERLRDDAAMMLGEKQQQLIKTSTRAAAAPGPEAQ*
Ga0134081_100965621	3300014150	Grasslands Soil	VFGKHPPLRELFERLAQTHPYWVRLSGSGSAVAAVYASEALRDDAGMMLGEKRQRLLKTATRALPAPGPEPA*
Ga0134078_100839541	3300014157	Grasslands Soil	PPLRELFERLAQTHPYWVRLAGSGSTVAAVYASEALRDDAGMLLGEKRQRLLKTATRALPAPGPEPA*
Ga0134078_101636314	3300014157	Grasslands Soil	CGSGSAVAAVYANERLRDDAAMMLGERQQRLVRTATCATPAAGPAPA*
Ga0137405_14300145	3300015053	Vadose Zone Soil	VTAVYANEGLRDDAALLLGEKHQRLIKTTTRAAAASGPEPA*
Ga0137420_13135823	3300015054	Vadose Zone Soil	GTHPNWVRLCGSGSAVAAVYANEGLRDDAAKLLGEKHQRLIKTTTRAVTAPGPEPA*
Ga0134073_101636253	3300015356	Grasslands Soil	AGTHPNWVRLCGSGSAVAAIYATAARRDEAAMVLGEQHQRLIKTTTRAAAAPGPEPLP*
Ga0134069_11876412	3300017654	Grasslands Soil	SGSGSAVAAVYASEALRDDAAMMLGEKRQRLIKTMTRALPAPGPEPG
Ga0134112_103326111	3300017656	Grasslands Soil	ERLAQTHPYWVRLCGSGSAVAAVYGTERLRDDAGMVMGEKQQRLIKTSTRASPAPGPEPL
Ga0134074_10406763	3300017657	Grasslands Soil	VYANEGLRDDAAMLLGEKHQRLIKTTTRAVAAPGPERA
Ga0134074_10619771	3300017657	Grasslands Soil	RLAETHPYWVRLSGSGSAVAAVYASEALRDDAGMMLGEKRQRLLKTATRALPAPGPEPA
Ga0184619_101887773	3300018061	Groundwater Sediment	VYANERARDDAGVQLGTQHQQLFKTSTRGLVAPGPEPQTE
Ga0066655_100338881	3300018431	Grasslands Soil	SGSTVAAVYASEALSDDAGMLLGEKRQRLLKTATRALPAPGPEPA
Ga0066655_102866161	3300018431	Grasslands Soil	LFERLAATHPYWVRLCGSGSAVAAVYASERLRDDARMQLGEKQQRLIDTSTRAVPAGGPEPLP
Ga0066667_116202372	3300018433	Grasslands Soil	CGSGSAVAAVYANEGLRDDAAMLLGEKHQRLIKTTTRAVAAAGPERA
Ga0066667_117676762	3300018433	Grasslands Soil	GTHPYWVRLCGSGSAVAAVYANAELRDDAAMVLGEKHQGLIKTATRAVAAPGPEPA
Ga0066667_121761131	3300018433	Grasslands Soil	AQTHPLWVRLCGSGSAVAAVYANDRLRDDARLVLGEKHQQLMSTLTRATAAPGPEPLP
Ga0215015_106286521	3300021046	Soil	LFEGLAATHPHWVRLCGSGSAVAAVYANERLRDDAAMRLGGKQHLLVKTATRGLAAPPPAAYQ
Ga0210378_100157813	3300021073	Groundwater Sediment	LCGSGSAVAAVYKKERDRDDAAQRVSPKDSRVIATTTRAATAPGPEPIANRTA
Ga0207684_100782071	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	DFEIPVFGKHPPLRALYERMAGTHPNWVRLCGSGSAVAAVYANEGLRDDAALVLGEKHQGLIKTTTRAAAAPGPEPA
Ga0207646_107876361	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	WVRLCGSGSAVAAVYANARLRDDAAMVLGEKHQRLIKTDTRAVVAPGPEPA
Ga0209350_10303891	3300026277	Grasslands Soil	AAVYANERLRGEAMTQLGEKHQRLIGTATRALAAPGPEPS
Ga0209235_10575684	3300026296	Grasslands Soil	RMAATKPLWVRLCGSGSAVAAVYRSERDREDAAMMVGEKQQRLIRTMTRATPAAGPEPIA
Ga0209235_11396023	3300026296	Grasslands Soil	ALRTLYEKLAQTHPLWVRLCGSGSAVAAVYSSERLRDDAAMVLGEKSQRLLRVATRASPAPGPEPA
Ga0209237_10123391	3300026297	Grasslands Soil	RMAATKPLWVRLCGSGSAVAAVYRSERDREDAAMMVGEKQQRLIRTTTRATPAARPEPLA
Ga0209237_12000791	3300026297	Grasslands Soil	SGSAVAAVYASERLRDDARMQLGERQQQLVGTTTRAVPAGGPEPLP
Ga0209236_10569031	3300026298	Grasslands Soil	KPLWVRLCGSGSAVAAVYRSERDREDAAMMVGEKQQRLIRTMTRATPAAGPEPIAS
Ga0209027_11421321	3300026300	Grasslands Soil	VRLCGSGSAVAAVYANDGLRDDAAMLLGEKHQRLIKTTTRALPAPSPEPRVAGT
Ga0209468_11499281	3300026306	Soil	LRTLYEKLAQTHPLWVRLCGSGSAVAAVYANPALRDDAALMLGEKQQQLIKTMTRAIPAPGPEPVP
Ga0209761_11979051	3300026313	Grasslands Soil	VFGKHPALRTLYEKLAQTHPLWVRLCGSGSAVAAVYSSERLRDDAAMVLGEKSQRLLRVATRASPAPGPEPA
Ga0209268_10077071	3300026314	Soil	SGSAVAAVYANAGLRDDAAMLLGEKHQRLIKTTTRAAAAPGPEPA
Ga0209154_12427003	3300026317	Soil	GKHPPLRALFERLAATHPYWVRLCGSGSAVAAVYASERLRDDARMQLGEKQQRLIDTATRAVPAGGPEPLP
Ga0209471_10033298	3300026318	Soil	AATHPYWVRLCGSGSAVAAVYANERLRDEAMTQLGEKHQRLIGTATRAVAAPGPEPS
Ga0209472_11385323	3300026323	Soil	FGKHPALRTLYEKLAQTHPLWVRLCGSGSAVAAVYANPALRDDAALMLGEKQQQLIKTMTRAIPAPGPEPVP
Ga0209801_11157934	3300026326	Soil	GKHPPLRALFERLAATHPYWVRLCGSGSAVAAVYASERLRDDARMQLGEKQQQLIGTTTRAVPASGPEPLP
Ga0209801_13614731	3300026326	Soil	LAGSGSTVAAVYASEALRDDAGMLLGEKRQRLLKTATRALPAPGPEPA
Ga0209803_11545831	3300026332	Soil	LWVRLCGSGSAVAAVYSSERLRDDAALVLGEKHQRLLRVATRASPAPGPEPT
Ga0209803_12801902	3300026332	Soil	VAAVYASEALRDDAGMLLGEKRQRLLKTATRALPAPGPEPA
Ga0209804_13433411	3300026335	Soil	RTLYEKLAQTHPLWVRLCGSGSAVAAVYSSERLRDDAAMVLGEKSQRLLRVATRASPAPGPEPA
Ga0209159_12013711	3300026343	Soil	PYWVRLCGSGSAVAAVYANEGLRDDAAMLLGEKHQRLIKTTTRAVAAPGPEPAEGLRRKARA
Ga0209701_103510731	3300027862	Vadose Zone Soil	ERLAATHPYWVRLCGSGSAVAAVYANVGLRDDAAMVLGEKHQRLIKTATRSVAAPGPEAA
Ga0209488_103316983	3300027903	Vadose Zone Soil	SGSAVAAVYANERVRDDAVMQLGTQHQLLIKTSTRALAAPGPEAHTQ
Ga0307497_104669201	3300031226	Soil	AVGAVYATERLRDDAAMQLGTQHQQLVKTSTRALVAPGPEAHTQ
Ga0307469_100526771	3300031720	Hardwood Forest Soil	AGTHPNWVRLCGSGSAVAAVYANARLRDDAAMVLGEKHQRLIKTDTRAVVAPGPEPA
Ga0326597_108524403	3300031965	Soil	CGSGGAVAAVYKSERDREDAAARLGERRRPLIWTATRAAPAADPTTT
Ga0326723_0022209_2_133	3300034090	Peat Soil	VAAVYASERVRDDAAMQLGTQHQLLVKTSTRALAAPGPEPHTL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050556

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences