Metagenome Family F050521

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050521
Family Type	Metagenome
Number of Sequences	145
Average Sequence Length	56 residues
Representative Sequence	VKKKINKIGEVSLSALEDQWQRDATAAAIAAARGVVQMDGPIPPGTPIGRLSDTE
Number of Associated Samples	85
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.45 %
% of genes near scaffold ends (potentially truncated)	96.55 %
% of genes from short scaffolds (< 2000 bps)	93.10 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.414 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (53.793 % of family members)
Environment Ontology (ENVO)	Unclassified (77.931 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (53.793 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.92% β-sheet: 0.00% Coil/Unstructured: 71.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF13479	AAA_24	21.38
PF14659	Phage_int_SAM_3	0.69
PF05063	MT-A70	0.69
PF12728	HTH_17	0.69
PF05037	DUF669	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG4725	N6-adenosine-specific RNA methylase IME4	Translation, ribosomal structure and biogenesis [J]	1.38

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.41 %
All Organisms	root	All Organisms	47.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.41 %
cellular organisms	root	All Organisms → cellular organisms	47.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.41 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	33.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.41 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	24.14 %
Kaistiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	24.14 %
Kaistia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.41 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4.83 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.45 %
Kaistia granuli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia → Kaistia granuli	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.41 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4.83 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	3.45 %
Kaistia granuli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia → Kaistia granuli	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100609691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1713	Open in IMG/M
3300005332\|Ga0066388_100876760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1479	Open in IMG/M
3300005332\|Ga0066388_101613680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1142	Open in IMG/M
3300005332\|Ga0066388_102158703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1004	Open in IMG/M
3300005332\|Ga0066388_104858911	Not Available	683	Open in IMG/M
3300005332\|Ga0066388_105388601	Not Available	648	Open in IMG/M
3300005332\|Ga0066388_105424430	Not Available	646	Open in IMG/M
3300005713\|Ga0066905_100369026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia → Kaistia granuli	1153	Open in IMG/M
3300005713\|Ga0066905_101296142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300005713\|Ga0066905_101559623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	603	Open in IMG/M
3300005764\|Ga0066903_108587666	Not Available	520	Open in IMG/M
3300006028\|Ga0070717_10567682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1028	Open in IMG/M
3300006175\|Ga0070712_101799699	Not Available	536	Open in IMG/M
3300006844\|Ga0075428_101488619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	709	Open in IMG/M
3300006854\|Ga0075425_100925180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	996	Open in IMG/M
3300006871\|Ga0075434_102318986	Not Available	539	Open in IMG/M
3300009792\|Ga0126374_10459886	Not Available	907	Open in IMG/M
3300010046\|Ga0126384_11653850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	604	Open in IMG/M
3300010359\|Ga0126376_12236966	Not Available	592	Open in IMG/M
3300010361\|Ga0126378_12846164	Not Available	552	Open in IMG/M
3300010366\|Ga0126379_11740883	Not Available	728	Open in IMG/M
3300010376\|Ga0126381_104894829	Not Available	514	Open in IMG/M
3300010398\|Ga0126383_10077569	Not Available	2886	Open in IMG/M
3300010398\|Ga0126383_11371011	All Organisms → cellular organisms → Bacteria → Proteobacteria	797	Open in IMG/M
3300010398\|Ga0126383_11826068	Not Available	696	Open in IMG/M
3300010398\|Ga0126383_13425594	Not Available	518	Open in IMG/M
3300010863\|Ga0124850_1047708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	1347	Open in IMG/M
3300012354\|Ga0137366_10366858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1052	Open in IMG/M
3300012971\|Ga0126369_11665403	Not Available	727	Open in IMG/M
3300016270\|Ga0182036_10252230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1321	Open in IMG/M
3300016270\|Ga0182036_10315860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1193	Open in IMG/M
3300016270\|Ga0182036_11399629	Not Available	585	Open in IMG/M
3300016270\|Ga0182036_11525527	Not Available	561	Open in IMG/M
3300016270\|Ga0182036_11936016	Not Available	500	Open in IMG/M
3300016294\|Ga0182041_10160219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1748	Open in IMG/M
3300016319\|Ga0182033_10246490	All Organisms → cellular organisms → Bacteria → Proteobacteria	1449	Open in IMG/M
3300016319\|Ga0182033_11095934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	711	Open in IMG/M
3300016341\|Ga0182035_10604410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	948	Open in IMG/M
3300016357\|Ga0182032_10565316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	942	Open in IMG/M
3300016371\|Ga0182034_10065115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2475	Open in IMG/M
3300016387\|Ga0182040_10061150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2397	Open in IMG/M
3300016422\|Ga0182039_10432475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1124	Open in IMG/M
3300016445\|Ga0182038_12198775	Not Available	500	Open in IMG/M
3300021560\|Ga0126371_10408252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1501	Open in IMG/M
3300021560\|Ga0126371_12627643	Not Available	610	Open in IMG/M
3300021560\|Ga0126371_13359468	Not Available	541	Open in IMG/M
3300031543\|Ga0318516_10782455	Not Available	539	Open in IMG/M
3300031544\|Ga0318534_10838114	Not Available	516	Open in IMG/M
3300031546\|Ga0318538_10171369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1152	Open in IMG/M
3300031546\|Ga0318538_10334833	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300031549\|Ga0318571_10115546	All Organisms → cellular organisms → Bacteria → Proteobacteria	894	Open in IMG/M
3300031561\|Ga0318528_10137555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1297	Open in IMG/M
3300031564\|Ga0318573_10194932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1073	Open in IMG/M
3300031564\|Ga0318573_10706206	Not Available	542	Open in IMG/M
3300031640\|Ga0318555_10602123	Not Available	595	Open in IMG/M
3300031668\|Ga0318542_10051687	Not Available	1867	Open in IMG/M
3300031668\|Ga0318542_10644151	Not Available	553	Open in IMG/M
3300031680\|Ga0318574_10246250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1033	Open in IMG/M
3300031681\|Ga0318572_10300963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	948	Open in IMG/M
3300031682\|Ga0318560_10161931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1186	Open in IMG/M
3300031682\|Ga0318560_10687376	Not Available	553	Open in IMG/M
3300031724\|Ga0318500_10241831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	874	Open in IMG/M
3300031744\|Ga0306918_10674416	Not Available	809	Open in IMG/M
3300031744\|Ga0306918_10711625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	786	Open in IMG/M
3300031744\|Ga0306918_11128463	Not Available	607	Open in IMG/M
3300031747\|Ga0318502_10006406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5085	Open in IMG/M
3300031747\|Ga0318502_10028208	Not Available	2807	Open in IMG/M
3300031747\|Ga0318502_10095709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1640	Open in IMG/M
3300031747\|Ga0318502_10749395	Not Available	591	Open in IMG/M
3300031747\|Ga0318502_11006076	Not Available	508	Open in IMG/M
3300031747\|Ga0318502_11031682	Not Available	502	Open in IMG/M
3300031748\|Ga0318492_10530138	Not Available	626	Open in IMG/M
3300031751\|Ga0318494_10233276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1053	Open in IMG/M
3300031751\|Ga0318494_10668286	Not Available	608	Open in IMG/M
3300031763\|Ga0318537_10065015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	1334	Open in IMG/M
3300031765\|Ga0318554_10801792	Not Available	526	Open in IMG/M
3300031768\|Ga0318509_10526755	Not Available	660	Open in IMG/M
3300031768\|Ga0318509_10528857	Not Available	658	Open in IMG/M
3300031768\|Ga0318509_10679333	Not Available	572	Open in IMG/M
3300031770\|Ga0318521_10030261	All Organisms → cellular organisms → Bacteria → Proteobacteria	2644	Open in IMG/M
3300031770\|Ga0318521_10109225	Not Available	1533	Open in IMG/M
3300031770\|Ga0318521_10679512	Not Available	625	Open in IMG/M
3300031770\|Ga0318521_11015866	Not Available	509	Open in IMG/M
3300031771\|Ga0318546_10232071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1267	Open in IMG/M
3300031771\|Ga0318546_11095496	Not Available	560	Open in IMG/M
3300031777\|Ga0318543_10143916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1045	Open in IMG/M
3300031778\|Ga0318498_10263878	Not Available	775	Open in IMG/M
3300031779\|Ga0318566_10441412	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300031782\|Ga0318552_10251584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	897	Open in IMG/M
3300031782\|Ga0318552_10560284	Not Available	583	Open in IMG/M
3300031782\|Ga0318552_10658705	Not Available	534	Open in IMG/M
3300031795\|Ga0318557_10587956	Not Available	511	Open in IMG/M
3300031795\|Ga0318557_10598410	Not Available	506	Open in IMG/M
3300031796\|Ga0318576_10343473	All Organisms → cellular organisms → Bacteria → Proteobacteria	705	Open in IMG/M
3300031797\|Ga0318550_10542303	Not Available	560	Open in IMG/M
3300031819\|Ga0318568_10014903	Not Available	4103	Open in IMG/M
3300031819\|Ga0318568_10116719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1611	Open in IMG/M
3300031819\|Ga0318568_10559062	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300031819\|Ga0318568_10824646	Not Available	575	Open in IMG/M
3300031821\|Ga0318567_10601614	Not Available	624	Open in IMG/M
3300031821\|Ga0318567_10866826	Not Available	511	Open in IMG/M
3300031831\|Ga0318564_10389029	Not Available	611	Open in IMG/M
3300031833\|Ga0310917_11003568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	559	Open in IMG/M
3300031846\|Ga0318512_10712319	Not Available	515	Open in IMG/M
3300031890\|Ga0306925_10050737	All Organisms → cellular organisms → Bacteria → Proteobacteria	4325	Open in IMG/M
3300031890\|Ga0306925_11776098	Not Available	592	Open in IMG/M
3300031910\|Ga0306923_10298589	Not Available	1841	Open in IMG/M
3300031910\|Ga0306923_10696543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1131	Open in IMG/M
3300031910\|Ga0306923_12440272	Not Available	517	Open in IMG/M
3300031912\|Ga0306921_10133777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2895	Open in IMG/M
3300031912\|Ga0306921_10841789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1045	Open in IMG/M
3300031941\|Ga0310912_11432151	Not Available	521	Open in IMG/M
3300031942\|Ga0310916_11379434	Not Available	578	Open in IMG/M
3300031945\|Ga0310913_10365608	Not Available	1022	Open in IMG/M
3300031945\|Ga0310913_10636916	All Organisms → cellular organisms → Bacteria → Proteobacteria	755	Open in IMG/M
3300031945\|Ga0310913_10706842	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300031946\|Ga0310910_10713376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	792	Open in IMG/M
3300031946\|Ga0310910_11130889	Not Available	609	Open in IMG/M
3300031954\|Ga0306926_11287069	Not Available	854	Open in IMG/M
3300032001\|Ga0306922_10573988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	1197	Open in IMG/M
3300032001\|Ga0306922_10840837	All Organisms → cellular organisms → Bacteria → Proteobacteria	957	Open in IMG/M
3300032001\|Ga0306922_12092730	Not Available	549	Open in IMG/M
3300032008\|Ga0318562_10249975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1030	Open in IMG/M
3300032025\|Ga0318507_10161253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	962	Open in IMG/M
3300032025\|Ga0318507_10417908	Not Available	584	Open in IMG/M
3300032035\|Ga0310911_10829498	Not Available	534	Open in IMG/M
3300032042\|Ga0318545_10024365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1947	Open in IMG/M
3300032051\|Ga0318532_10024579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1969	Open in IMG/M
3300032051\|Ga0318532_10191888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	725	Open in IMG/M
3300032052\|Ga0318506_10002336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5194	Open in IMG/M
3300032052\|Ga0318506_10137132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1066	Open in IMG/M
3300032059\|Ga0318533_11233779	Not Available	547	Open in IMG/M
3300032064\|Ga0318510_10058289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1386	Open in IMG/M
3300032066\|Ga0318514_10361237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	770	Open in IMG/M
3300032068\|Ga0318553_10564711	Not Available	596	Open in IMG/M
3300032076\|Ga0306924_11008614	Not Available	913	Open in IMG/M
3300032076\|Ga0306924_11811165	Not Available	636	Open in IMG/M
3300032090\|Ga0318518_10374763	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300032094\|Ga0318540_10559679	Not Available	551	Open in IMG/M
3300032261\|Ga0306920_101503944	All Organisms → cellular organisms → Bacteria → Proteobacteria	961	Open in IMG/M
3300032261\|Ga0306920_102967763	Not Available	641	Open in IMG/M
3300032261\|Ga0306920_103310369	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300032261\|Ga0306920_103830820	Not Available	549	Open in IMG/M
3300032261\|Ga0306920_104427162	Not Available	503	Open in IMG/M
3300033289\|Ga0310914_11824275	Not Available	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.93%
Host-Associated	Host-Associated	2.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.93%
Plants	Host-Associated → Plants	2.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.07%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.28%
Loam	Environmental → Terrestrial → Soil → Loam	9.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.07%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	77.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	53.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.28%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1006096911	3300005332	Tropical Forest Soil	VGIVSKIRTIGEISISAIEDQWQRDATAAAIEGARGVVQINGPIPPGTP
Ga0066388_1008767601	3300005332	Tropical Forest Soil	MSRKVKTIGEVSLSALEDLWQRQATAAAITAVRDLFKSDGPIPPLTPVGRLADGEIGWMIAAII
Ga0066388_1016136803	3300005332	Tropical Forest Soil	VRKKARTIGEVSLSALEDQWQRDATAAAIAAMRGVVQMDGPIPPGTPVGRLSETELGW
Ga0066388_1021587031	3300005332	Tropical Forest Soil	MKRIRKIGEVSISAFENQWQRDATAAAIEAARGVVQSGDPIPPGTPVGRLSDIEWGWVIA
Ga0066388_1048589111	3300005332	Tropical Forest Soil	VKKKIRTIGEVSLSALEDQWQRDATAAAITAMRGVVQLDGPIPPGTPVGRLSETELGWMLSAGLFAW
Ga0066388_1053886012	3300005332	Tropical Forest Soil	MGIMKRASHIGQVSLSALENDWQRRATAAAITGARGVIRVDGPIPPGTPIGRLSDVEWG
Ga0066388_1054244302	3300005332	Tropical Forest Soil	VKKKTRTVGEVSLSALEDQWQRDATAAAITAMRGVVQLDGPIPPGTPVGRLSETELGWMLSAGLFAW
Ga0066905_1003690261	3300005713	Tropical Forest Soil	VKKVRAIGEVSLSVLEDQWQRAATAAAIAAARGVVQMDGPVPPGTPIGRLS
Ga0066905_1012961421	3300005713	Tropical Forest Soil	VSKKVRTVGQVSLSAIEDQWQRDATAAAIEAARGVVQMDGPIPPGTPIGRLSDTEWG
Ga0066905_1015596232	3300005713	Tropical Forest Soil	VIGQVSVTALEDEWQRRATAAAIEAARGVVKDGALPSGTPIGRLA
Ga0066903_1085876662	3300005764	Tropical Forest Soil	VRKIRTVGEVSLSAIEDQWQRDATAVAIEAARGVVQMGGPIPPGTPIGRLSD
Ga0070717_105676823	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VKKKTRTIGEVSLSALEDQWQRDAATAAIAAMRGVVQMNGPIPPGTPVGRLSDTELGW
Ga0070712_1017996991	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGVVKKIGQVSPAALEDHWQRQGTAAAIAAARGVVKTDGPIPPGTPIGRLGDGEW
Ga0075428_1014886191	3300006844	Populus Rhizosphere	MRLTPSVGEVSPSALDDEWQRRATAAAIAAARGVVKIDGTIPPGA
Ga0075425_1009251801	3300006854	Populus Rhizosphere	MSKIRNPVGQVSLSAIEDQWQRDATAAAIAAARGVVQMDGPIPPGTPIGRLSDTEWG
Ga0075434_1023189861	3300006871	Populus Rhizosphere	VGDVKKKTRAIGEVSLSALEDQWQRDATASAVAAMRGVVQMSGPIPLGTPVGRLSDTELG
Ga0126374_104598863	3300009792	Tropical Forest Soil	VGVVKKVSAIGEISLSAIEDQWQRAATAAAITAARGVVQMDGPVPPGAPIGRLSDTEW
Ga0126384_116538501	3300010046	Tropical Forest Soil	MKKPRTVGEISPSAIEDQWQRDATAAAIAGARGVIRNGGPIPPGTPIGRLNDPEWGWLVAGILFG*
Ga0126376_122369661	3300010359	Tropical Forest Soil	MGIVKKKTRAIGEVSLSALEDVWLRQATEAAIAGARGVISMDGPIPPGTQVGRLSEIEWGWVFS*
Ga0126378_128461642	3300010361	Tropical Forest Soil	VGVVKKKTRTIGEVSLSALEDRWQRDATAAAIAAMRGVVQMGGPVPPGT
Ga0126379_117408831	3300010366	Tropical Forest Soil	MRKRARAIGEVSLSALQDQWQRDATAAAIAGARGVIRTDGPVPPGTPIGR
Ga0126381_1048948292	3300010376	Tropical Forest Soil	MKKVRTIGEVSLSGLERKWQRDAHAAAIAGARGVLQMGGPIPPGTPIGRLR
Ga0126383_100775691	3300010398	Tropical Forest Soil	VRKIRNIGQISLSAIEDQWLRDATSAAIAGARGVVKVDGPIPPATPIGRLS
Ga0126383_113710112	3300010398	Tropical Forest Soil	VGVVKKIRTVGEVSLSALEDQWQRDATAAAIASARGVVQIGGPISPGTPVGRLSD
Ga0126383_118260682	3300010398	Tropical Forest Soil	VGVVKKKTRTVGEVSLSAIEDQWQRDATAAAIAGARGVIHMGGPIPPGTPIGRLSDIEW
Ga0126383_134255942	3300010398	Tropical Forest Soil	MRKIRTIGEITISALEDQWQRDATAAAIAGARGVVQTDGPIPPGAPIGRLSDIEWGWI
Ga0124850_10477083	3300010863	Tropical Forest Soil	MKKIRHVGQVSLSAIEDQWQRDATAAAIAAARGVIRMDGPIPPGTPIGRLSDTE
Ga0137366_103668583	3300012354	Vadose Zone Soil	VGAVRKIRNPIGQVSLSALEDQRQRDATAAAIAAARRVIQLDGPIPPGTPVGRLSDTEWGWVVA
Ga0126369_116654031	3300012971	Tropical Forest Soil	MGVMKKMRSVGEVSLSAIEDQWQRDATTAAIAGARGVVQMDGPIPPRTPIGRLSNTEWG
Ga0182036_102522301	3300016270	Soil	MGVVKKKTHTIGEVSLSALGDQWQRDATAAAITAMRGVVRMDGPIPPGTPVGRLSE
Ga0182036_103158601	3300016270	Soil	MRTIRTVGMVSETALEDEWQRRATAAAIEAARGVIALNGPIPPATPVGRLNDTELGWVL
Ga0182036_113996292	3300016270	Soil	MGVVKKKIRIGQISLSAIEDQWQRDATVAAVAAARRVIQMDSPIPPGTP
Ga0182036_115255271	3300016270	Soil	MKKKVRTIGEVSLSALEDQWQRDATAAAIAGARGVIQLDGPIPPGTPIGRLTDTEWG
Ga0182036_119360161	3300016270	Soil	MRKIRNPIGQVSLSAFEDQWQRDATSAAIAGARSVIQVDGPIPPGTPIGRLSD
Ga0182041_101602194	3300016294	Soil	MKKMRTVGQISPSAIEDQWQRDATAAAIEAARGVVKLDGPIPPGTPIGR
Ga0182033_102464903	3300016319	Soil	MKKARTVGEVSLSVLEDQWQRRATAAAIEAARGVVKLDGPIPPAVPSGR
Ga0182033_110959342	3300016319	Soil	MGVVKKKIRIGQISLSAIEDQWQRDATAAAIAAARRVIQMDGPIPPGTPVGRL
Ga0182035_106044103	3300016341	Soil	MRKVRTIGVVSETTLEDEWQRRATAAAIEAARGVVKLDGPIPPGTPIGRL
Ga0182032_105653161	3300016357	Soil	VKKMRTVGELSLSAIEDQWQRDATAAAIAGARGVVQMGGPIPPGAPVGRLSDVEWGW
Ga0182034_100651151	3300016371	Soil	MRKARTIGMVSETALEDEWQRRATAAAIEAARGVVQMDGPIPPGTPVGRLS
Ga0182040_100611506	3300016387	Soil	VTMSNKKIKAVGEVSLSALDDVWQRDATAAAIAGARGVVQIGGPVPPGTPIGRLSDV
Ga0182039_104324751	3300016422	Soil	MRKVRTIGMVSETALEDEWQRRATAAAIEAARGIMQTDGVIPPGTPIGRLSDAEWG
Ga0182038_121987752	3300016445	Soil	MMKRKTRTIGEVSLSALEDQWRRDATAAAIAGARGVVQMDGPIPPGTPIGRLS
Ga0126371_104082521	3300021560	Tropical Forest Soil	MKVTIGQVSLCVLEKDWQRRATAAAIAGARGVIQADGPIPPGTPIGRLSDVEWRWIFAAVLFG
Ga0126371_126276431	3300021560	Tropical Forest Soil	VKRVSAIGEISLSAIEDQWQRAATAAAITAARGVVQMDGPVPPGAPIGRLSDTEWGW
Ga0126371_133594681	3300021560	Tropical Forest Soil	MSKIRKPIRIQMVSLSALEDVRQRDATRAAIAGARSVVQIDGPLPPGTPIGRLSDTEWGWIVA
Ga0318516_107824551	3300031543	Soil	MKKVRTIGEVSLSAIEDQWQRDATAAAIAGARGVIQLGGPIPPGAPVGRLSDIEWGWVV
Ga0318534_108381141	3300031544	Soil	MKKMRTVGEVSLSAIEDQWQRDATAAAIAAARGVVQMGGPIPPGTPIGRLTDTELGWIVAAVLFAW
Ga0318538_101713691	3300031546	Soil	MKTRTIPQVSPAAIEDVWQRRASAAGVAGARAVVEDGGPIPPGTPVGRLSDIQWGWIVA
Ga0318538_103348332	3300031546	Soil	MKKARTVGEVSLSVLEDQWQRRATAAAIEAARGVVKLDGPIPPAVPIGRLSDTEWGWILA
Ga0318571_101155461	3300031549	Soil	MVALMKKTRTIGEASLSVLEDQWQRDATAAAIAGMRGVVQMDGPIPPGTPVGRLN
Ga0318528_101375551	3300031561	Soil	VKKKTHTIGEVSLSALADQWQRDATAAAITAMRGVVQMDGPIPPGTPVGRLSDTEWGWMLSAG
Ga0318573_101949321	3300031564	Soil	VKKKKTRTVGEVSLSALEDQWQRDATASAIAAIRGVVQMDGPIPSGTPVGRLSDTELGWMFSAS
Ga0318573_107062062	3300031564	Soil	VKKKTHTIGEVSLSALADQWQRDATAAAITAMRGVVQMDGPIPPGTPVGRLSDTEWGWIL
Ga0318555_106021232	3300031640	Soil	MRKVRTIGVVSETTLEDEWQRRATAAAIEAARGVVKLDGPIPPGTPIGRLAD
Ga0318542_100516874	3300031668	Soil	VGVVKKMRSVAEVSLSAIEDQWQRDATAAAIAGARGVVQMGGPIPPGAPVGRLSDVE
Ga0318542_106441511	3300031668	Soil	MGIVRKKFRIRQISLSALEDQWQRDATAAAITAARGVVQMDAPIPPGTPVGRLSDVEWGW
Ga0318574_102462501	3300031680	Soil	MRKVRTIGVVSETALEDEWQRRATTAAIGAARRVVQTDGPIPPGTPIGRLSETE
Ga0318572_103009631	3300031681	Soil	MRKVRTVGMVSEAALEDEWQRRATAAAIEAARSLVQMNGPLPPGTPIGRLSDTE
Ga0318560_101619311	3300031682	Soil	MRTIRTVGMVSETALEDEWLRRATAAAIEAARGVITLGGPVPPATPVGRLNDTELGWV
Ga0318560_106873761	3300031682	Soil	MKKMRTVGQASLSAIEDQWQRDATTAAIAGARGVVQMDGPIPPGTPIGRL
Ga0318500_102418312	3300031724	Soil	VGVVKKMRSVAEVSLSAIEDQWQRDATAAAIAGARGVVQMGGPIPPGAPVGRLSDVEWG
Ga0306918_106744161	3300031744	Soil	VKKKTHTIGEVSLSALADQWQRDATAAAITAMRGVVQMDGPIPPGTPVGRLSDTEWGLILAAM
Ga0306918_107116252	3300031744	Soil	MGVVRKIRTVGEVSISAIEDQWQRDATAAAIAAARGVVQMDGPIPPGTPVGRLSD
Ga0306918_111284632	3300031744	Soil	VKKVRAVGEVSLAALEDQRQRDATAAAIAAARGVVQLDGPIPPGTPVGRLSDIEWGW
Ga0318502_100064061	3300031747	Soil	MSNKKIKAVGEVSLSALDDVWQRDATAAAIAGARGVVQIGGPVPPGTPIGRL
Ga0318502_100282086	3300031747	Soil	MRTVGELSLSAIEDQWQRDATTAAIAGARGVVQMDGPIPPGTPIGRLSDMEWGW
Ga0318502_100957093	3300031747	Soil	MKKTRTIGEASLSVLEDQWQRDATAAAIAGMRGVVQMDGPIPPGTPVGMGPSI
Ga0318502_107493952	3300031747	Soil	VGVVRKIRAVGEISLSAIEDQWQRNATAAAIAGARGVVQMDGPIPPGTPIGRLADTEWG
Ga0318502_110060761	3300031747	Soil	VGDVRKIRAVGEISLSALEDQWQRDATAAAIAGARGVVEMDGPIPPGTPIGRLSDT
Ga0318502_110316822	3300031747	Soil	MGTLMKKMRTIGMVSETALEDEWQRRASAAAIEAARGIVQVGGPLPPGTPIGRLSDTEWG
Ga0318492_105301382	3300031748	Soil	MGVVKKKTHTIGEVSLSALADQWQRDATAAAITAMRGVVQMDGPIPPGTPVGRLSDTEWGWILAA
Ga0318494_102332763	3300031751	Soil	MRTTRIVGMVSETALEDEWLRRATAAAIAAARDVIKLDGPIPPGTPVGRLADVELGWVLAAMLFAWVRTRAE
Ga0318494_106682861	3300031751	Soil	MKTRTIPQVSPAAIEDVWQRRASAAGVAGARAVVEDGGPIPPGTPVGRLSDIQWGW
Ga0318537_100650151	3300031763	Soil	MSNKKIKAVGEVSLSALDDVWQRDATAAAIAGARGVVQIGGPVPPGTPIGRLSD
Ga0318554_108017921	3300031765	Soil	MGIVRKKFRIRQISLSALEDQWQRDATAAAITAARGVVQMDAPIPPGTPVGRLS
Ga0318509_105267552	3300031768	Soil	MGTLMKKARTIGMVSETALEDEWQRRATAAAIEAARGVVQMGGPIPPGTPIGRLSDTEWGSAL
Ga0318509_105288571	3300031768	Soil	VKKVRAVGEVSLAALEDQRQRDATAAAIAAARGVVQLDGPIPPGTPVGRLG
Ga0318509_106793331	3300031768	Soil	MSKKVRRFGEVSLSAIEDQWQRDATAAATAAARRVVQMGGPIPPSTPIGRLSDVEWGSIISGV
Ga0318521_100302611	3300031770	Soil	VGAVSRIRNPVGQVSLSALEDQWQRDATAAAIAGARGVVQMDGPIPPGTPIGRLSDTEWG
Ga0318521_101092251	3300031770	Soil	VGAVSRIRNPIGQVSLSVIEDQWQRDATAAAIAAARGVVHMDGPIPPGTPIGRLSDTEWGWVL
Ga0318521_106795121	3300031770	Soil	MRTIRTVGMVSETALEDEWLRRATAAAIEAARGVITLGGPIPPATPVGRLNDTELG
Ga0318521_110158661	3300031770	Soil	MGTLMKKIRTIGMVSETALEDEWQRRATAAAIEAARGVVQMDGPIPPGTPVGRLSDT
Ga0318546_102320711	3300031771	Soil	MSKKVRRFGEVSLSAIEDQWQRDATAAATAAARRVVQMGGPIPPSTPIGR
Ga0318546_110954962	3300031771	Soil	MGIMKKARAVRQVSLSALEDQWQRDATSAAIVAMRGVVQVDGPIPPGTPIGKLTDIELGWLFSA
Ga0318543_101439161	3300031777	Soil	MRTTRIVGMVSETALEDEWLRRATAAAIEAARGVITLGGPIPPATPV
Ga0318498_102638781	3300031778	Soil	MRTTRIVGMVSETALEDEWLRRATAAAIAAARDVIKLDGPIPPGTPVGRLADVELGWVLA
Ga0318566_104414122	3300031779	Soil	VKKKKTRTIGEVSLSVLEDQWQRNSTAAAIEAARSVIQMDGPIPPGTPVGRLSDTEWS
Ga0318552_102515841	3300031782	Soil	MRTTRIVGMVSETALEDEWLRRATAAAIAAARDVIKLDGPIPPGTPVGRLAD
Ga0318552_105602842	3300031782	Soil	MRSVAEVSLSAIEDQWQRDATAAAIAGARGVVQMGGPIPPGAPVGRLSD
Ga0318552_106587052	3300031782	Soil	MTMGRKIKTVGEVSLSALEDQWQRNATAAAIAGARGVVQMDGPIPPGTPIGRLSDTEWGW
Ga0318557_105879561	3300031795	Soil	VKKKTHTIGEASLSALEDQWQHDATAAAIAAARGVVQMDGPIPPGTPVGRLSD
Ga0318557_105984101	3300031795	Soil	MGTLMKKIRTIGMVSETALEDEWQRRATAAAIEAARGVVKLDGPIPPAVPIGRLSDM
Ga0318576_103434732	3300031796	Soil	VKKKKTRTIGEVSLSVLEDQWQRNSTAAAIEAARSVIQMDGPIPPGTPVGRLSDTEWGW
Ga0318550_105423031	3300031797	Soil	VKKKTHTIGEASLSALEDQWQHDATAAAIAAARGVVQMDGPIPPSTPIGRLSDT
Ga0318568_100149031	3300031819	Soil	VKKKINKIGEVSLSALEDQWQRDATAAAIAAARGVVQMDGPIPPGTPIGRLSDTE
Ga0318568_101167193	3300031819	Soil	VSRIRNPVGQVSLSALEDQWQRDATAAAIAGARGVVQMDGPIPPGTPIGRLSDTEWGW
Ga0318568_105590621	3300031819	Soil	MKNARTVGEVSLSVLEDQWQRRATAAAIEAARGVVKLDGPIPPAVPIGRLSDTEW
Ga0318568_108246462	3300031819	Soil	VKKMRSVAEVSLSAIEDQWQRDATAAAIAAARGVVQMGGPIPPGTPIGRLTDTELGWIVAAVLFA
Ga0318567_106016142	3300031821	Soil	VKKKTHTIGEVSLSALADQWQRDATAAAITAMRGVVQMDGPIPPGTPVGRLSDTEW
Ga0318567_108668262	3300031821	Soil	MKKARTIGMVSETALEDEWQRRATAAAIEAARGVVKLDGPIPPGTPVGRLADTEWGW
Ga0318564_103890292	3300031831	Soil	MRTIRTVGMVSETALEDEWQRRATAAAIEAARGVVQMGGPIPPGTPIG
Ga0310917_110035681	3300031833	Soil	VKKVRAIGEVSLSVLEDQRQRDATAAAIEAARGVVRMDGPIPPGTPVGRLSETEWGWVVAAVLFGWIRVR
Ga0318512_107123191	3300031846	Soil	MGTLMKKARTIGMVSETALEDEWQRRATAAAIEAARGVVQMGGPIPPGTPIGRLSDT
Ga0306925_100507371	3300031890	Soil	VKKKTHTIGEVSLSALADQWQRDATAAAITAMRGVVQMDGPIPPGTPVGRLSDTEWGWILAA
Ga0306925_117760982	3300031890	Soil	MMKRKTRTIGEVSLSALEDQWRRDATAAAIAGARGVVQMDGPIPPGTPIGRLSDTEWGWVVA
Ga0306923_102985891	3300031910	Soil	VKKKKTHTIGEVSLSALGDQWQRDATAAAITAMRGVVQMDGPIPPGTPVGRLSETELGWRLSA
Ga0306923_106965433	3300031910	Soil	MGVVKKKTHTIGEVSLSALGDQWQRDATAAAITAMRGVVRMDGPIPPGTPVGRLSEAELGWMLSAGLFAW
Ga0306923_124402721	3300031910	Soil	VRKIQAIGEVSISAIEDQWQRDATAAAIAGARGVVQMDGPIPPGTPVGRLSE
Ga0306921_101337775	3300031912	Soil	MRTTRTVGMVSETALEDEWLRRATAAAIEAARGVITLGGPIPPATPVGRLNDTELGW
Ga0306921_108417891	3300031912	Soil	MKKLRTIGQVSQSALEDVRQWQATAAAVAAARGVIRDGVIPPNTPIGRLSDIEWGWIT
Ga0310912_114321512	3300031941	Soil	MGDAMKKKVRTIGEVSLSALEDQWQRDATAAAIAGARGVIQLDGPIPPGTPIGR
Ga0310916_113794342	3300031942	Soil	VKKIRAVGQVSLSALEDQWQRDGVSAALAAMRRVVQTDGPIPPGTPIGKLTDI
Ga0310913_103656083	3300031945	Soil	MGVVKKKTHTIGEVSLSALADQWQRDATAAAITAMRGVVQMDGPIPPGTPVGRLS
Ga0310913_106369161	3300031945	Soil	MKKTRTIGEASLSVLEDQWQRDATAAAIAGMRGVVQMDGPIPPGTPVGRLNDT
Ga0310913_107068421	3300031945	Soil	MKKARTIGMVSETALEDEWLRRATAAAIEAARGVVQMDGPIPPGTPI
Ga0310910_107133762	3300031946	Soil	VKKVRAIGEVSLSVLEDQRQRDATAAAIEAARGVVRMDGPIPPGTPVGRLSETE
Ga0310910_111308891	3300031946	Soil	MTKKVRAIGEVSLSALEDQWQRDATANAIAGACGVVQMDGPIPPGTPIGRLSDIEWGWI
Ga0306926_112870691	3300031954	Soil	VGALMKKVRTIGQISLSAIEDRWQRDATAAAIAGARGVIRDGGPIPPGTPI
Ga0306922_105739881	3300032001	Soil	VKKVRAIGEVSLSVLEDQWQRNSTAAAIEAARSVIQMDGPIPPGTPVGRL
Ga0306922_108408371	3300032001	Soil	MKKVRTIGEVSLSAIEDQWQRDATAAAIAGARGVIQLGGPIPPGAPVGRLSDIEWGWVVA
Ga0306922_120927301	3300032001	Soil	MRKIRTVGMVSETAIEDEWQRRATAAAIEAARGVVKFDGPIPPGTPVG
Ga0318562_102499751	3300032008	Soil	MRTTRTVGMVSETALEDEWLRRATAAAIEAARGVITLGGPIPPATPVGRLNDTELGWV
Ga0318507_101612531	3300032025	Soil	MGVVKKLHTVGEVSLSAIEDQRQRDSTAAAIAGAREVVRNGPIPSGTPIGRL
Ga0318507_104179081	3300032025	Soil	MKKARTVGEVSLSVLEDQWQRRATAAAIEAARGVVKLDGPIPPAVPIGRLSD
Ga0310911_108294981	3300032035	Soil	VKKKKTRTIGEVSLSVLEDQWQRNSTAAAIEAARSVIQMDGPIPPGTPVGRLSDTEWSWILAAMLFAWIG
Ga0318545_100243651	3300032042	Soil	MGTLMRKIRTIGIVSETALEDEWQRRATAAAIEAARGVVQMDGPIPPGTPIGRLSDTEWG
Ga0318532_100245791	3300032051	Soil	MGIVRKKFRIRQISLSALEDQWQRDATAAAITAARGVVQMDAPIPPGTPVG
Ga0318532_101918881	3300032051	Soil	MGVVKKLHTVGEVSLSAIEDQRQRDSTAAAIAGAREVVRNGPIPSGTPI
Ga0318506_100023369	3300032052	Soil	VKKKINKIGEVSLSALEDQWQRDATAAAIAAMRGVVQMGGPIPPGTPIGRLSDT
Ga0318506_101371323	3300032052	Soil	MRTIRTVGMVSETALEDEWLRRATAAAIEAARGVITLGGPVPPATPVGRLNDTELG
Ga0318533_112337792	3300032059	Soil	MTRKIKRIGEVSLSALEDQWQRDATAAAVAGARGVVQVSGPVPPGTPIGRLSDTEWGWVI
Ga0318510_100582893	3300032064	Soil	MRTTRTVGMVSETALEDEWLRRATAAAIEAARGVITLGGPIPPATPVGRLNDTE
Ga0318514_103612372	3300032066	Soil	VGVVKKMRSVAEVSLSAIEDQWQRDATAAAIAGARGVVQMGGPIPPGAPVGRLSDV
Ga0318553_105647111	3300032068	Soil	VKKVRAIGEVSLSVLEDQWQRNSTAAAIEAARSVIQMDGPIPPGTPVGRLSDTEWSWILA
Ga0306924_110086141	3300032076	Soil	VKKVRAVGEVSLAALEDQRQRDATAAAIAAARGVVQLDGPIPPGTPVGRLGDIEWGW
Ga0306924_118111651	3300032076	Soil	MRKRRTIGQVSQSALEDEWQRQATAAAIAAARGVIRTDGAIPPATPVGRLSDFE
Ga0318518_103747631	3300032090	Soil	MKKARTVGEVSLSVLEDQWQRRATAAAIEAARGVVKLDGPIPPAVPIGRLSDTEWG
Ga0318540_105596791	3300032094	Soil	VSRIRNPIGQVSLSVIEDQWQRDATAAAIAAARGVVHMDGPIPPGTPIGRLSDTE
Ga0306920_1015039443	3300032261	Soil	MKKIRAIGQVSLSALEDQWQRDATTAAIAAARGVVQTDGPIPPGTPVGRLSETEWVWVLAAMLFAWI
Ga0306920_1029677631	3300032261	Soil	VKKIRAIGQVSLSAIEDQWQRDATAAAITAARGVIQMDGPIPPGTPVGKLSDVEWGW
Ga0306920_1033103692	3300032261	Soil	VGVVKKVRAIGEVSLSVLEDQWQRNSTAAAIEAARSVIQMDGPIPPGTP
Ga0306920_1038308202	3300032261	Soil	MGVMKKARAIGQVSLSAIEDQWQRDATAAAIAAARGVVQMDGPIPPGTPVGRLSDT
Ga0306920_1044271621	3300032261	Soil	MKKMRTIGMVSETALEDEWQRKATAAAIEAACGVVQMDGPIPPGTPIGRLSDGEWGWVLAAMLFAWI
Ga0310914_118242752	3300033289	Soil	VKKKKTHTIGEVSLSALGDQWQRDATAAAITAMRGVVQMDGPIPPGTPVGRLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F050521

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences