Metagenome Family F050447

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050447
Family Type	Metagenome
Number of Sequences	145
Average Sequence Length	82 residues
Representative Sequence	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRGCFADDSQPPITVHVNNESIKLDAAGRTMSLAL
Number of Associated Samples	108
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.41 %
% of genes near scaffold ends (potentially truncated)	34.48 %
% of genes from short scaffolds (< 2000 bps)	90.34 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.517 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.414 % of family members)
Environment Ontology (ENVO)	Unclassified (53.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.517 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.25% β-sheet: 19.64% Coil/Unstructured: 49.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.122.1.0: automated matches	d6m37a_	6m37	0.80272
d.122.1.3: Histidine kinase	d1th8a1	1th8	0.76381
d.131.1.1: DNA polymerase III, beta subunit	d1vpka2	1vpk	0.65533
d.131.1.0: automated matches	d5w7za2	5w7z	0.64386
d.36.1.0: automated matches	d4doia_	4doi	0.63973

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF01406	tRNA-synt_1e	45.52
PF01687	Flavokinase	31.03
PF06574	FAD_syn	11.72
PF09190	DALR_2	4.14
PF02021	UPF0102	1.38
PF12706	Lactamase_B_2	1.38
PF02624	YcaO	0.69
PF13622	4HBT_3	0.69
PF03819	MazG	0.69
PF02744	GalP_UDP_tr_C	0.69
PF01087	GalP_UDP_transf	0.69
PF00753	Lactamase_B	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	49.66
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	45.52
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	45.52
COG0196	FAD synthase	Coenzyme transport and metabolism [H]	42.76
COG0792	Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family	Replication, recombination and repair [L]	1.38
COG1944	Ribosomal protein S12 methylthiotransferase accessory factor YcaO	Translation, ribosomal structure and biogenesis [J]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.52 %
Unclassified	root	N/A	34.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.52 %
Unclassified	root	N/A	34.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.52 %
Unclassified	root	N/A	34.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	24.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.76 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.69 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.72 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	11.03 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6.90 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.69 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.72 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	11.03 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	6.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.69 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.72 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	11.03 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	6.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.69 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.72 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	11.03 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	6.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.69 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.72 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	11.03 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	6.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.69 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004156\|Ga0062589_100094974	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300005183\|Ga0068993_10269079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	609	Open in IMG/M
3300005328\|Ga0070676_10086162	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300005330\|Ga0070690_101482711	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005331\|Ga0070670_101156343	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005333\|Ga0070677_10364878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300005333\|Ga0070677_10486111	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005334\|Ga0068869_101814161	Not Available	546	Open in IMG/M
3300005353\|Ga0070669_100924293	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300005354\|Ga0070675_100438952	Not Available	1169	Open in IMG/M
3300005355\|Ga0070671_100041907	All Organisms → cellular organisms → Bacteria → Proteobacteria	3805	Open in IMG/M
3300005356\|Ga0070674_100134941	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300005356\|Ga0070674_100528300	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300005356\|Ga0070674_101622652	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005356\|Ga0070674_101967063	Not Available	532	Open in IMG/M
3300005364\|Ga0070673_100726857	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300005364\|Ga0070673_101600091	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005365\|Ga0070688_100130809	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300005365\|Ga0070688_101666184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	522	Open in IMG/M
3300005365\|Ga0070688_101792546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	504	Open in IMG/M
3300005438\|Ga0070701_10335682	Not Available	940	Open in IMG/M
3300005441\|Ga0070700_100588762	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005455\|Ga0070663_100431380	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300005467\|Ga0070706_100821407	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300005471\|Ga0070698_100473644	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300005471\|Ga0070698_100967896	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300005548\|Ga0070665_100567326	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300005577\|Ga0068857_100997985	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300005615\|Ga0070702_100687762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300005616\|Ga0068852_101648066	Not Available	664	Open in IMG/M
3300005617\|Ga0068859_100150291	All Organisms → cellular organisms → Bacteria	2404	Open in IMG/M
3300005617\|Ga0068859_100253933	Not Available	1849	Open in IMG/M
3300005836\|Ga0074470_10000440	Not Available	545	Open in IMG/M
3300005842\|Ga0068858_102542346	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	506	Open in IMG/M
3300005843\|Ga0068860_100535789	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300005843\|Ga0068860_102271688	Not Available	563	Open in IMG/M
3300005844\|Ga0068862_100156328	All Organisms → cellular organisms → Bacteria	2033	Open in IMG/M
3300005844\|Ga0068862_101147351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300005844\|Ga0068862_101792261	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300006046\|Ga0066652_100261994	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300006237\|Ga0097621_100740100	All Organisms → cellular organisms → Bacteria → Proteobacteria	907	Open in IMG/M
3300006237\|Ga0097621_101825800	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300006755\|Ga0079222_10885190	Not Available	746	Open in IMG/M
3300006806\|Ga0079220_12149262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	501	Open in IMG/M
3300006854\|Ga0075425_100491555	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300006918\|Ga0079216_11336228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	588	Open in IMG/M
3300007004\|Ga0079218_10001966	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7852	Open in IMG/M
3300009036\|Ga0105244_10229742	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300009098\|Ga0105245_12465367	Not Available	573	Open in IMG/M
3300009100\|Ga0075418_13024440	Not Available	512	Open in IMG/M
3300009148\|Ga0105243_10509641	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300009553\|Ga0105249_12814961	Not Available	558	Open in IMG/M
3300009609\|Ga0105347_1235569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300010399\|Ga0134127_11093725	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300010399\|Ga0134127_12698204	Not Available	577	Open in IMG/M
3300010401\|Ga0134121_11016597	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300011417\|Ga0137326_1061194	Not Available	829	Open in IMG/M
3300012160\|Ga0137349_1015784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300012885\|Ga0157287_1074609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	584	Open in IMG/M
3300012895\|Ga0157309_10295021	Not Available	545	Open in IMG/M
3300012905\|Ga0157296_10207728	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300012914\|Ga0157297_10162829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300013297\|Ga0157378_11588282	Not Available	700	Open in IMG/M
3300013306\|Ga0163162_11628362	Not Available	737	Open in IMG/M
3300013308\|Ga0157375_10310358	Not Available	1741	Open in IMG/M
3300013308\|Ga0157375_13002080	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300014269\|Ga0075302_1094375	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	665	Open in IMG/M
3300014326\|Ga0157380_10167639	Not Available	1915	Open in IMG/M
3300014326\|Ga0157380_11519188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300014969\|Ga0157376_10749437	All Organisms → cellular organisms → Bacteria → Acidobacteria	986	Open in IMG/M
3300015371\|Ga0132258_10228848	All Organisms → cellular organisms → Bacteria	4528	Open in IMG/M
3300015372\|Ga0132256_102868384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	579	Open in IMG/M
3300015374\|Ga0132255_101665175	Not Available	967	Open in IMG/M
3300015374\|Ga0132255_101715576	Not Available	953	Open in IMG/M
3300017792\|Ga0163161_11488993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	594	Open in IMG/M
3300017792\|Ga0163161_11978338	Not Available	519	Open in IMG/M
3300017965\|Ga0190266_10086623	All Organisms → cellular organisms → Bacteria → Acidobacteria	1243	Open in IMG/M
3300017965\|Ga0190266_10641268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	651	Open in IMG/M
3300018083\|Ga0184628_10001302	All Organisms → cellular organisms → Bacteria	12388	Open in IMG/M
3300018083\|Ga0184628_10316102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300018469\|Ga0190270_10448840	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300018469\|Ga0190270_10522190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1137	Open in IMG/M
3300018476\|Ga0190274_10425167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1299	Open in IMG/M
3300018476\|Ga0190274_13867645	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300018481\|Ga0190271_10193821	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2015	Open in IMG/M
3300018481\|Ga0190271_10202747	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1976	Open in IMG/M
3300018482\|Ga0066669_10373452	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1195	Open in IMG/M
3300019362\|Ga0173479_10015851	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300020027\|Ga0193752_1018085	All Organisms → cellular organisms → Bacteria	3428	Open in IMG/M
3300021082\|Ga0210380_10328631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300022886\|Ga0247746_1040088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300023066\|Ga0247793_1089529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	531	Open in IMG/M
3300023168\|Ga0247748_1060996	Not Available	584	Open in IMG/M
3300025321\|Ga0207656_10009743	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3571	Open in IMG/M
3300025908\|Ga0207643_10103948	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1668	Open in IMG/M
3300025908\|Ga0207643_10281768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M
3300025908\|Ga0207643_11012712	Not Available	537	Open in IMG/M
3300025910\|Ga0207684_10937097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300025923\|Ga0207681_10345837	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1189	Open in IMG/M
3300025923\|Ga0207681_10435398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1064	Open in IMG/M
3300025923\|Ga0207681_10596278	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300025926\|Ga0207659_11344854	Not Available	613	Open in IMG/M
3300025930\|Ga0207701_10878869	Not Available	752	Open in IMG/M
3300025931\|Ga0207644_10029360	All Organisms → cellular organisms → Bacteria	3814	Open in IMG/M
3300025934\|Ga0207686_11356844	Not Available	585	Open in IMG/M
3300025937\|Ga0207669_10095839	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300025937\|Ga0207669_10468613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1002	Open in IMG/M
3300025940\|Ga0207691_11505733	Not Available	550	Open in IMG/M
3300025942\|Ga0207689_10760958	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300025942\|Ga0207689_11477175	Not Available	568	Open in IMG/M
3300025960\|Ga0207651_10437356	Not Available	1120	Open in IMG/M
3300025961\|Ga0207712_10918465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300025981\|Ga0207640_10252350	Not Available	1370	Open in IMG/M
3300026035\|Ga0207703_10093422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2533	Open in IMG/M
3300026035\|Ga0207703_10954328	Not Available	822	Open in IMG/M
3300026067\|Ga0207678_10262351	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1480	Open in IMG/M
3300026088\|Ga0207641_10256618	Not Available	1635	Open in IMG/M
3300026116\|Ga0207674_10771374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	928	Open in IMG/M
3300027637\|Ga0209818_1236818	Not Available	546	Open in IMG/M
3300027886\|Ga0209486_10004966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	5759	Open in IMG/M
3300028379\|Ga0268266_10348647	Not Available	1391	Open in IMG/M
3300028380\|Ga0268265_11727050	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300028380\|Ga0268265_11768651	Not Available	624	Open in IMG/M
3300028380\|Ga0268265_12035298	Not Available	581	Open in IMG/M
3300028381\|Ga0268264_11193914	Not Available	770	Open in IMG/M
3300028802\|Ga0307503_10502955	Not Available	653	Open in IMG/M
3300031538\|Ga0310888_10240474	Not Available	1012	Open in IMG/M
3300031547\|Ga0310887_10497203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300031547\|Ga0310887_11057123	Not Available	520	Open in IMG/M
3300031740\|Ga0307468_100734085	Not Available	831	Open in IMG/M
3300031740\|Ga0307468_101698646	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300031740\|Ga0307468_102246555	Not Available	529	Open in IMG/M
3300031858\|Ga0310892_10297923	Not Available	1016	Open in IMG/M
3300031892\|Ga0310893_10200932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300031903\|Ga0307407_11323809	Not Available	566	Open in IMG/M
3300031908\|Ga0310900_11471270	Not Available	574	Open in IMG/M
3300031944\|Ga0310884_10315662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300032002\|Ga0307416_100778792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300032005\|Ga0307411_11741690	Not Available	577	Open in IMG/M
3300032074\|Ga0308173_11614447	Not Available	610	Open in IMG/M
3300032122\|Ga0310895_10667483	Not Available	538	Open in IMG/M
3300032157\|Ga0315912_10001249	All Organisms → cellular organisms → Bacteria	32710	Open in IMG/M
3300032157\|Ga0315912_10195511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1587	Open in IMG/M
3300032157\|Ga0315912_10285635	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1300	Open in IMG/M
3300034149\|Ga0364929_0096975	Not Available	927	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.79%
Environmental	Environmental	46.21%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.79%
Terrestrial	Environmental → Terrestrial	40.69%
Aquatic	Environmental → Aquatic	5.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.07%
Sediment	Environmental → Aquatic → Sediment	4.14%
Roots	Host-Associated → Plants → Roots	1.38%
Freshwater	Environmental → Aquatic → Freshwater	0.69%
Marine	Environmental → Aquatic → Marine	0.69%
Floodplain	Environmental → Terrestrial → Floodplain	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	20.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	18.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.72%
Loam	Environmental → Terrestrial → Soil → Loam	7.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.07%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	18.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.07%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	10.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	8.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.45%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.76%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.07%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.07%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.07%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.07%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.07%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.38%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.69%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062589_1000949743	3300004156	Soil	VTGSFDFNLSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASAEEFVRGCFVDGATEPPISVHVNSESIQLDAAGRTMSLAL*
Ga0068993_102690792	3300005183	Natural And Restored Wetlands	MTGTFDFNISCPCDGRLARIITDIVRQAAKDAGRDEAAVAAMAASAHDFVSGCVADHAQAPIQMHVNNESIKLDAAGRTMSLAL*
Ga0070676_100861623	3300005328	Miscanthus Rhizosphere	MTGTFDFNISCPCDGRLARIITDIVRQAAKDAGRDDAAAAAIVASADDFVRACFADDSQPPIKMHVNNESIKLDAAGRTMSLAL*
Ga0070690_1014827112	3300005330	Switchgrass Rhizosphere	MTATFDFNLSCPCDGRLARIITDIVRLAAKDAGRDDAAAAALAASADDFVRGCFADDSQPPITVHVNNESIKLDAAGRTMSLAL*
Ga0070670_1011563432	3300005331	Switchgrass Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASAEDFVRSCFGDDSQPPITVHVNNESIKLDAAGRTMSLAL*
Ga0070677_103648782	3300005333	Miscanthus Rhizosphere	VTGSFDFNLSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASAEEFVRGCFADGATEPPISVHVNSESIQLDAAGRTMSLAL*
Ga0070677_104861112	3300005333	Miscanthus Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAIVASADDFVRACFADDSQPPIKMHVNNESIKLDAAGRTMSLAL*
Ga0068869_1018141611	3300005334	Miscanthus Rhizosphere	DFNMSCPCDARLARIITDLVRQAAKDAGRDEAAAAAMAASADDFVRGCFTDGASLPPIQVHVNNESIKLDADGRTMSLAL*
Ga0070669_1009242932	3300005353	Switchgrass Rhizosphere	MSCPCDGRLARIITDIVRQAAKDAGRDDVAAAAMAASADDFVRGCFADGAAEPPIKVHVNSESIQLDAAGRTMSLSL
Ga0070675_1004389522	3300005354	Miscanthus Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRSCFGDDSQPPITVHVNNESIKLDAAGRTMSLAL*
Ga0070671_1000419076	3300005355	Switchgrass Rhizosphere	MTGTFDFNISCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMVASADDFVRACVADDSQPPIKMHVNNESIKLDAAGRTMSLAL*
Ga0070674_1001349412	3300005356	Miscanthus Rhizosphere	GTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMVASADDFVRACFADASQPPITVHVNNASIKLDAAGRTMSLAL*
Ga0070674_1005283002	3300005356	Miscanthus Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRGCFADDTQPPITVHVNNESIKLDAAGRTMSLAL*
Ga0070674_1016226522	3300005356	Miscanthus Rhizosphere	SCPCDGRLARIITDIVRQAAKDAGRDDAAAAAIVASADDFVRACFADDSQPPIKMHVNNESIKLDAAGRTMSLAL*
Ga0070674_1019670632	3300005356	Miscanthus Rhizosphere	VTGSFDFNLSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASAEEFVRGCFSDGAAEPPISVHVNSESIQLDAAGRTMSLAL*
Ga0070673_1007268572	3300005364	Switchgrass Rhizosphere	MTGSFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDVAAAAMAASADDFVRGCFADGAAEPPIKVHVNSESIQLDAAGRTMSLSL*
Ga0070673_1016000912	3300005364	Switchgrass Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMADSADDFVRSCFGDDSQPPITVHVNNESIKLDAAGRTMSLAL*
Ga0070688_1001308092	3300005365	Switchgrass Rhizosphere	MTGTFDFNLSCPCDGRLAPIITDIVRQAARDAGRDDLATSAMVASADEFIRGCFADGASEPPIKVHVDSESIRLDAAGRTMSLAL*
Ga0070688_1016661842	3300005365	Switchgrass Rhizosphere	MTGTFDFNISCPCDGRLARIITDIVRQAAKDAGRDDAAAAAIVASADDFVRACFADDSQPPIKMHVNNESIKLDAA
Ga0070688_1017925462	3300005365	Switchgrass Rhizosphere	MTATFDFNLSCPCDGRLARIITDIVRLAAKDAGRDDAAAAALAASADDFVRGCFADDSQPPITVHVNN
Ga0070701_103356822	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTGTFDFNISCPCDGRLARIITDIVRQAAKDAGRDDAAAAAIVASADDFVRACFADDSQPPIKMHVNNESIKLDAAGRT
Ga0070700_1005887622	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTGTFDFNLSCPCDGRLARIITDIVRQAARDAGRDDLATSAMVASADEFIRGCFADGASEPPIKVHVDSESIRLDAAGRTMSLAL*
Ga0070663_1004313802	3300005455	Corn Rhizosphere	MTETFDFNMSCPCDGRLARIITDIVRQAAKDAGRDEAAAAAMVASVDDFVRVCVADNSKPPIKVHVNNESIKLDAAGRTMSLAL*
Ga0070706_1008214072	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTGSFDFNMSCPCDGRLARIITDIVRLAAKDAGRDEATAAAMAASADDFVRGCFTDDSQPPIRVHVNSESIQLDAAGRTISLAL*
Ga0070698_1004736442	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTATFDFNMSCPCDGRLARIITDIVRQAARDAGRDDAAAAAMAASADDFVQACFADDSQPPIKMHVNNESIKLDAAGRTMSLAL*
Ga0070698_1009678962	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRLAAKDAGRDEAAVAAMAASADDFVRGCFTDDSQPPIRVHVNNESIQLDAAGRTISLAL*
Ga0070665_1005673262	3300005548	Switchgrass Rhizosphere	MTATFDFNLSCPCDGRLARIITDIVRLAAKNAGRDDAAAAALAASADDFVRGCFADDSQPPITVHVNNESIKLDAAGRTMSLAL*
Ga0068857_1009979852	3300005577	Corn Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDEAAAAAMAASAHDFVSGCFADHSQPPIKVHVNNESIKLDAAGRTMSLAL*
Ga0070702_1006877622	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASAEEFVRGCFADGATEPPISVHVNSESIQLDAAGRTMSLAL*
Ga0068852_1016480661	3300005616	Corn Rhizosphere	MTGTFDFNMSCPCDGRLARIITEIVRQAAKDAGRDDSAAAAMAASADDFVRGCFGDGASQPPIKVHVNNESIKLDADGRTMSLAL*
Ga0068859_1001502912	3300005617	Switchgrass Rhizosphere	MTETFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRACVADDSQPPIKVHVNNESIKLDAAGRTMSLAL*
Ga0068859_1002539332	3300005617	Switchgrass Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRMAAKDAGRDEAAAAALAASADDFVRGCFNDGASQPPIKVHVNNESIKLDADGRTISLAL*
Ga0074470_100004402	3300005836	Sediment (Intertidal)	MTGTFDFNMSCPCDGRLARIITDIVRQAARDAGRDDVAAAAMAASADDFVRACFADGGSHPPIRIHVNNESIKLDAAGRTMSLAL*
Ga0068858_1025423461	3300005842	Switchgrass Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRMAAKDAGRDEAAAAALVASADDFVRGCFNDGASQPPIKVHVNNQSIKLDADGRTISLAL*
Ga0068860_1005357892	3300005843	Switchgrass Rhizosphere	MTGTFDFNMSCPCDGRLAGIITDIVRQAAKDAGRDDAAAAAMAASADDFVRVCVADDSQPPITVHVNNESIKLDAAGRTMSLTL*
Ga0068860_1022716882	3300005843	Switchgrass Rhizosphere	PCDGRLARIITDIVRMAAKDAGRDEAAAAALAASADDFVRGCFNDGASQPPIKVHVNNESIKLDADGRTISLAL*
Ga0068862_1001563283	3300005844	Switchgrass Rhizosphere	MTGSFDFNMSCPCDGRLARIITDIVRLAAKDAGRDEAAAAAMAASADDFVRGCFTDDSQPPIRVHVNNESIQLDAAGRTISLAL*
Ga0068862_1011473511	3300005844	Switchgrass Rhizosphere	DFNMSCPCDGRLARIITDIVRQAARDAGRDDAAAAAMAASADDFVQACFADDSQPPIKMHVNNESIKLDAAGRTMSLAL*
Ga0068862_1017922612	3300005844	Switchgrass Rhizosphere	LAQIITDIVRLAAKDAGRDDAAAAALAASADDFVRGCFADDSQPPITVHVNNESIKLDAAGRTMSLAL*
Ga0066652_1002619943	3300006046	Soil	MSGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRSCVGDDSQPPITVHVNNESIKLDAAGRTMSLAL*
Ga0097621_1007401002	3300006237	Miscanthus Rhizosphere	MTETFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRSCFGDDSQPPITVHVNNESIKLDAAGRTMSLAL*
Ga0097621_1018258001	3300006237	Miscanthus Rhizosphere	SCPCDGRLARIITDIVRQAAKDAGRDDAAAAAIVASADDFVRACFADDSQPPIRMHVNNESIKLDAAGRTMSLAL*
Ga0079222_108851901	3300006755	Agricultural Soil	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGCDDAAVAAMAASADDFVQRCFADHSQPPIKMHVNNESIKLDAAGRSMSLAL*
Ga0079220_121492622	3300006806	Agricultural Soil	MTGTFDFNLSCPCDDRLARIITDIVRQAAKDAGRDEAAAAAMAASAQDFVSGCFADHSQPPIKVHVNNESIKLDAAGRTMSLAL*
Ga0075425_1004915552	3300006854	Populus Rhizosphere	MTGTFDFNLSCPCDGRLARIITDIVRQAAKDAGRDEAAAAAMAKSADDFVRGCFTDGASQPPIKVHVNNESIQLDADGRTMSLAL*
Ga0079216_113362281	3300006918	Agricultural Soil	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAATALAASADDFVRGCFTDASQPPIKMHVNNESIQLDAAGRTMSLAL*
Ga0079218_100019667	3300007004	Agricultural Soil	MTGTFDFNLSCPCDGRLARIITDIVRQAAKDAGRDEAAATAMAASADEFVRGCFADTSQPPIKVHVNNESIQLDAAGRTMSLAL*
Ga0105244_102297422	3300009036	Miscanthus Rhizosphere	MTETFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAIVASADDFVRACFADDSQPPIKMHVNNESIKLDAAGRTMSLAL*
Ga0105245_124653672	3300009098	Miscanthus Rhizosphere	SCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRACVADDSQPPIKVHVNNESIQLDAAGRTMSLAL*
Ga0075418_130244402	3300009100	Populus Rhizosphere	MTGTFDFNISCPCDDRLARIITDIVRQAAKDAGRDEAAAAAMAASAHDFVSGCFADHSQPPIKVHVNNESIKLDAAGRTMSLAL*
Ga0105243_105096412	3300009148	Miscanthus Rhizosphere	MTGTFDFNISCPCDGRLARIITDIVRQAAKDAGRDDAAAAAIVASADDFVRACFADDSQPPIRMHVNNESIKLDAAGRTMSLAL*
Ga0105249_128149611	3300009553	Switchgrass Rhizosphere	GRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRACVADDSQPPIKVHVNNESIKLDAAGRTMSLAL*
Ga0105347_12355691	3300009609	Soil	GTFDFNLSCPCDGRLARIITDIVRQAARDAGRDDLATSAMVASADEFIRSCFADGASEPPIKVHVNSESIRLDAAGRTMSLAL*
Ga0134127_110937252	3300010399	Terrestrial Soil	MTGSFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDTAAAALAASADDFVRGCFADGTAHPPIKMHVNNESIQLDAAGRTMSLAL*
Ga0134127_126982042	3300010399	Terrestrial Soil	MTATFDFNMSCPCDGRLARIITDIVRQAAKDAGRDEAAAAAMAASAHDFVSGCFADHSQPPITMHVNNASIKLDAAGRTMSLAL*
Ga0134121_110165972	3300010401	Terrestrial Soil	MTGTFDFNISCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRACVADDSQPPIKVHVNNESIKLDAAGRTMSLAL*
Ga0137326_10611942	3300011417	Soil	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDEAAATAMAASADEFVRDCFADTTHPPIKVHVNNESI
Ga0137349_10157842	3300012160	Soil	MTGSFDFNMSCPCDDRLARIITDIVRQAAKDAGRDDTAAAALAASADDFVRGCCTDASQPPIKMHVNNESIQLDAAGRTMSLAL*
Ga0157287_10746092	3300012885	Soil	LTGSFDFNLSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMVASAEEFVRGCFADGATEPPISVHVNSESIQLDAAGRTMSLTL*
Ga0157309_102950212	3300012895	Soil	DFNLSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASAEEFVRGCFVDGATEPPISVHVNSESIQLDAAGRTMSLAL*
Ga0157296_102077282	3300012905	Soil	MTGTFDFNLSCPCDGRLARIITDIVRQAARDAGRDDLATSAMVASADEFIRGCFADGASEPPIKVHVDSESIRLDAAG
Ga0157297_101628292	3300012914	Soil	FDFNLSCPCDGRLARIITDIVRQAARDAGRDDLATSAMVASADEFIRGCFADGASEPPIKVHVDSESIRLDAAGRTMSLAL*
Ga0157378_115882822	3300013297	Miscanthus Rhizosphere	MTGTFDFNISCPCDGRLARIITDIVRQAAKDAGRDDAAAAAIVASADDFVRACFADASQPPITVHVNNASIKLDAAGRTMSLAL*
Ga0163162_116283621	3300013306	Switchgrass Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRACVADDSQPPIKVHVNNESIKLDAAGRTMSLAL*
Ga0157375_103103582	3300013308	Miscanthus Rhizosphere	FDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRGCFADGAAEPPIKVHVNSESIQLDAAGRTMSLSL*
Ga0157375_130020802	3300013308	Miscanthus Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRGCFAGDSNSQPPITVHVNNGSIKLDAAGRTMSLAL*
Ga0075302_10943751	3300014269	Natural And Restored Wetlands	MTGTFDFNISCPCDGRLARIITDIVRQAAKDAGRDEAAVAAMAASAHDFVSGCVADHAQAPIQMHVNNESIKLDA
Ga0157380_101676392	3300014326	Switchgrass Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAVAAMAASADDFVRGCFGDDSQPPITVHVNNESIKLDAAGRTMSLAL*
Ga0157380_115191882	3300014326	Switchgrass Rhizosphere	FDFNMSCPCDGRLARIITDIVRQAARDAGRDDLATSAMVASADEFIRGCFADGASEPPIKVHVDSESIRLDAAGRTMSLAL*
Ga0157376_107494372	3300014969	Miscanthus Rhizosphere	VTGSFDFNLSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMVASAEEFVRGCFADGATEPPISVHVNSESIQLDAAGRTMSLAL*
Ga0132258_102288482	3300015371	Arabidopsis Rhizosphere	MTGTFDFNMSCPCDGRLASIITDIVRQAAKDAGRDEEAAAAMVASAENFVRGCFAEGGSQPPIQVHVNCDAIRLQSAGRTISLAL*
Ga0132256_1028683842	3300015372	Arabidopsis Rhizosphere	MTGTFDFNISCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMVASADDFVRACFADDSQPPIKMHVNNESIKLDAAGRTMSLAL*
Ga0132255_1016651752	3300015374	Arabidopsis Rhizosphere	GRLARIITDIVRQAAKDAGRDDAAAAAMVASADDFVRACVADDSQPPIKMHVNNESIKLDAAGRTMSLAL*
Ga0132255_1017155761	3300015374	Arabidopsis Rhizosphere	MTGTFDFNISCPCDGRLARIITDIVRQAAKDAGRDDAAAAAIVASADDFVRACFADDSQPPIKMHVNNESIK
Ga0163161_114889932	3300017792	Switchgrass Rhizosphere	MTGTFDFNISCPCDGRLARIITDIVRQAAKDAGRDDAAAAAIVASADDFVRACFADDSQPPIKMHVNNESIKLDAAGRTMSLAL
Ga0163161_119783382	3300017792	Switchgrass Rhizosphere	MTGSFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRGCFADGAAEPPIKVHVNSESIQLDAAGRTM
Ga0190266_100866232	3300017965	Soil	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDEAAATAMAASADEFVRDCFADTTHPPIKVHVNNESIQLDAAGRTMSLAL
Ga0190266_106412682	3300017965	Soil	VTGSFDFNLSCPCDGRLARIITDIVLKAAKDAGRDDAAAAAMAASAEEFVRGCFSDGATDPPISVHVSSESIQLDAAGRTMSLAL
Ga0184628_100013025	3300018083	Groundwater Sediment	MTGSFDFNLSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRGCFADGVAEPPIKVHVNSESIQLDAAGRTMSLSL
Ga0184628_103161022	3300018083	Groundwater Sediment	MTGTFDFNLSCPCDGRLAPIITDIVRQAARDAGRDDLATSAMVASADEFIRGCFADGASEPPIKVHVDSESIRLDAAGRTMSLAL
Ga0190270_104488402	3300018469	Soil	MTGTFDFNLSCPCDGRLARIITDIVRQAARDAGRDDLATSAMVASADEFIRGCFADGASEPPIKVHVNSESIRLDAAGRTMSLAL
Ga0190270_105221902	3300018469	Soil	VTGSFDFNLSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASAEEFVRGCFADGATEPPISVHVNSESIQLDAAGRTMSLAL
Ga0190274_104251672	3300018476	Soil	MTGTFDFNLSCPCDGRLARIITDIVRQAAKDAGRDEAAAAAMASSADEFVRGCFVDGSTSPPIKVHVNNESIQLDAAGRTMSLAL
Ga0190274_138676452	3300018476	Soil	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDDAAAAMAASADDFVRGCFADDSQPPITVHVNNESIKLDAAGRTMSLAL
Ga0190271_101938212	3300018481	Soil	MTGTFDFNLSCPCDGRLARIITDIVRQAARDAGRDDLATSAMVASADEFIRSCFADGASEPPIKVHVNSESIRLDAAGRTMSLAL
Ga0190271_102027473	3300018481	Soil	MTGTFDFNLSCPCDGRLARIITDIVRQAAKDAGRDDGAAAAMAASADDFVRACFADDSHPPIKVHVNNESIKLDAAGRTMSLAL
Ga0066669_103734522	3300018482	Grasslands Soil	MSGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRSCVGDDSQPPITVHVNNESIKLDAAGRTMSLAL
Ga0173479_100158513	3300019362	Soil	FNLSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASAEEFVRGCFVDGATEPPISVHVNSESIQLDAAGRTMSLAL
Ga0193752_10180854	3300020027	Soil	MTGSFDFRMSCPCDGRLAKIIHDIVRQAAKDAGRDEAGATAMAAAVDDFLQSTFAAGETQPPIQMHVNNESIELQAAGRTMSLAL
Ga0210380_103286312	3300021082	Groundwater Sediment	PCDGRLARIITDIVRQAARDAGRDDLATSAMVASADEFIRGCFADGASEPPIKVHVDSESIRLDAAGRTMSLAL
Ga0247746_10400881	3300022886	Soil	VTGSFDFNLSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASAEEFVRGCFVDGATEPPISVHVNSESIQLDAAGRTMSLAL
Ga0247793_10895292	3300023066	Soil	MTGTFDFNLSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRGCFADDTQPPITVHVNNESIKLDAAGRTMSLAL
Ga0247748_10609962	3300023168	Soil	MTGTFDFNLSCPCDGRLARIITDIVRQAARDAGRDDLATSAMVASADEFIRGCFADGASEPPIKVHVDSESIRLDAAGRTMSLAL
Ga0207656_100097435	3300025321	Corn Rhizosphere	MTGTFDFNMSCPCDGRLARIITEIVRQAAKDAGRDDSAAAAMAASADDFVRGCFGDGASQPPIKVHVNNESIKLDADGRTMSLAL
Ga0207643_101039482	3300025908	Miscanthus Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASAEDFVRSCFGDDSQPPITVHVNNESIKLDAAGRTMSLAL
Ga0207643_102817682	3300025908	Miscanthus Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAALAASADDFVRSCVSDGASEPPIKVHVNNESIKLDAAGRTMSLAL
Ga0207643_110127121	3300025908	Miscanthus Rhizosphere	SCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMVASADDFVRACVADDSQPPIKMHVNNESIKLDAAGRTMSLAL
Ga0207684_109370972	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTGSFDFNMSCPCDGRLARIITDIVRLAAKDAGRDEAAVAAMAASADDFVRGCFTDDSQPPIRVHVNSESIQLDAAGRTISLAL
Ga0207681_103458372	3300025923	Switchgrass Rhizosphere	MTGSFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDVAAAAMAASADDFVRGCFADGAAEPPIKVHVNSESIQLDAAGRTMSLSL
Ga0207681_104353982	3300025923	Switchgrass Rhizosphere	MTATFDFNLSCPCDGRLARIITDIVRLAAKDAGRDDAAAAALAASADDFVRGCFADDSQPPITVHVNNESIKLDAAGRTMSLAL
Ga0207681_105962782	3300025923	Switchgrass Rhizosphere	MTATFDFNMSCPCDGRLARIITDIVRQAARDAGRDDAAAAAMAASADDFVQACFADDSQPPIKMHVNNESIKLDAAGRTMSLAL
Ga0207659_113448542	3300025926	Miscanthus Rhizosphere	CDGRLARIITDIVRQAAKDAGRDDAAAAAMVASADDFVRACVADDSQPPIKMHVNNESIKLDAAGRTMSLAL
Ga0207701_108788692	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VTGSFDFNLSCPCDGRLARIITDIVRLAAKDAGRDDAAAAALAASADDFVRGCFADDSQPPITVHVNNQSIKLDAAG
Ga0207644_100293606	3300025931	Switchgrass Rhizosphere	MTGTFDFNISCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMVASADDFVRACVADDSQPPIKMHVNNESIKLDAAGRTMSLAL
Ga0207686_113568441	3300025934	Miscanthus Rhizosphere	CPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRGCFADDTQPPITVHVNNESIKLDAAGRTMSLAL
Ga0207669_100958391	3300025937	Miscanthus Rhizosphere	GTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMVASADDFVRACFADASQPPITVHVNNASIKLDAAGRTMSLAL
Ga0207669_104686132	3300025937	Miscanthus Rhizosphere	VTGSFDFNLSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASAEEFVRGCFSDGAAEPPISVHVNSESIQLDAAGRTMSLAL
Ga0207691_115057332	3300025940	Miscanthus Rhizosphere	VTGSFDFNLSCPCDGRLARIITEIVRQAAKDAGRDDAAAAAMVASAEEFVRGCFADGATEPPISVHVNSESIQLDAAGRTMSLTL
Ga0207689_107609582	3300025942	Miscanthus Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRQAARDAGRDDAAAAAMAASADDFVQACFADDSQPPIKMHVNNESIKLDAAGRTMSLAL
Ga0207689_114771751	3300025942	Miscanthus Rhizosphere	DFNMSCPCDARLARIITDLVRQAAKDAGRDEAAAAAMAASADDFVRGCFTDGASLPPIQVHVNNESIKLDADGRTMSLAL
Ga0207651_104373562	3300025960	Switchgrass Rhizosphere	MTGSFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRGCFADGAAEPPIKVHVNSESIQLDAAGRTMSLSL
Ga0207712_109184652	3300025961	Switchgrass Rhizosphere	DFNMSCPCDGRLARIITDIVRQAAKDAGRDDDAAAAMAASADDFVRGCFADDSQPPITVHVNNESIKLDAAGRTMSLAL
Ga0207640_102523502	3300025981	Corn Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAIVASADDFVRACFADDSQPPIKMHVNNESIKLDAAGRTMSLAL
Ga0207703_100934222	3300026035	Switchgrass Rhizosphere	MTETFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRACVADDSQPPIKVHVNNESIKLDAAGRTMSLAL
Ga0207703_109543282	3300026035	Switchgrass Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRMAAKDAGRDEAAAAALVASADDFVRGCFNDGASQPPIKVHVNNQSIKLDADGRTISLAL
Ga0207678_102623512	3300026067	Corn Rhizosphere	MTETFDFNMSCPCDGRLARIITDIVRQAAKDAGRDEAAAAAMVASVDDFVRVCVADNSKPPIKVHVNNESIKLDAAGRTMSLAL
Ga0207641_102566182	3300026088	Switchgrass Rhizosphere	FDFNISCPCDGRLARIITDIVRQAAKDAGRDDAAAAAIVASADDFVRACFADDSQPPIKMHVNNESIKLDAAGRTMSLAL
Ga0207674_107713742	3300026116	Corn Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDEAAAAAMAASAHDFVSGCFADHSQPPIKVHVNNESIKLDAAGRTMSLAL
Ga0209818_12368182	3300027637	Agricultural Soil	MIGSFDFNMSCPCDDRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVKGCFADSSHPPIKVHVNNESIQLDAAGRTMSLAL
Ga0209486_100049662	3300027886	Agricultural Soil	MTGTFDFNLSCPCDGRLARIITDIVRQAAKDAGRDEAAATAMAASADEFVRGCFADTSQPPIKVHVNNESIQLDAAGRTMSLAL
Ga0268266_103486472	3300028379	Switchgrass Rhizosphere	LARIITDIVRLAAKNAGRDDAAAAALAASADDFVRGCFADDSQPPITVHVNNESIKLDAAGRTMSLAL
Ga0268265_117270502	3300028380	Switchgrass Rhizosphere	MTGTFDFNMSCPCDGRLARIITDIVRMAAKDAGRDEAAAAALAASADDFVRGCFNDGASQPPIKVHVNNESIKLDADGRTISLAL
Ga0268265_117686511	3300028380	Switchgrass Rhizosphere	LAQIITDIVRLAAKDAGRDDAAAAALAASADDFVRGCFADDSQPPITVHVNNESIKLDAAGRTMSLAL
Ga0268265_120352982	3300028380	Switchgrass Rhizosphere	MTGTFDFNISCPCDDRLARIITDIVRQAAKDAGRDEAAAAAMAASAHDFVSGCFADHSQPPIKVHVNNESIKLDAAGRTMSLAL
Ga0268264_111939141	3300028381	Switchgrass Rhizosphere	MTGTFDFNMSCPCDGRLAGIITDIVRQAAKDAGRDDAAAAAMAASADDFVRVCVADDSQPPITVHVNNESIKLDAAGRTMSLTL
Ga0307503_105029551	3300028802	Soil	MTGTFDFNLSCPCDGRLARIVTDIVRQAARDAGRDDAAAEAMATSADDFMRGCFTDGSAQPPIKVHVNSESIRLDAAGRTMSLSL
Ga0310888_102404742	3300031538	Soil	GTFDFNLSCPCDGRLAPIITDIVRQAARDAGRDDLATSAMVASADEFIRGCFADGASEPPIKVHVDSESIRLDAAGRTMSLAL
Ga0310887_104972032	3300031547	Soil	MTGTFDFNISCPCDDRLARIITDIVRQAAKDAGRDEAAAAAMAASAQDFVSGCFADNSQPPIKMHVNNESIKLDAAGRTMSLAL
Ga0310887_110571232	3300031547	Soil	FDFNMSCPCDGRLARIITDIVRQAARDAGRDDAAAAAMAASADDFVRACFADDSQPPIKMHVNNESIKLDAAGRTMSLAL
Ga0307468_1007340851	3300031740	Hardwood Forest Soil	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMVASADDFVRACFADASQPPITVHVNN
Ga0307468_1016986462	3300031740	Hardwood Forest Soil	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVRGCFADDSQPPITVHVNNESIKLDAAGRTMSLAL
Ga0307468_1022465551	3300031740	Hardwood Forest Soil	MTGTFDLNLSCPCDGRLARIITDIVRQAAKDAGRDEAAAAAMAASADDFVSGCFADGDTHPPIKIHVNNESIQLDAAGRTMSLAL
Ga0310892_102979232	3300031858	Soil	MTGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDEAAAAAMAASAQDFVSGCFADNSQPPIKMHVNNESIKLDAAGRTMSLAL
Ga0310893_102009321	3300031892	Soil	DRLARIITDIVRQAAKDAGRDEAAAAAMAASAQDFVSGCFADNSQPPIKMHVNNESIKLDAAGRTMSLAL
Ga0307407_113238092	3300031903	Rhizosphere	MIGSFDFNMSCPCDNRLARIITDIVRQAAKDAGRDDAAAAAMAASADDFVKVCFTDTSHPPIRIHVNNESIQLDAAGRTMSLAF
Ga0310900_114712701	3300031908	Soil	MTGTFDFIISCPCDDRLARIITDIVRQAAKDAGRDEAAAAAMAASAQDFVSGCFADNSQPPIKMHVNNESIKLDAAGRTMSLAL
Ga0310884_103156622	3300031944	Soil	FNLSCPCDGRLARIITDIVRQAARDAGRDDLATSAMVASADEFIRGCFADGASEPPIKVHVDSESIRLDAAGRTMSLAL
Ga0307416_1007787922	3300032002	Rhizosphere	MIGSFDFNMSCPCDDRLARIITDIVRQAAKDAGRDEAAAAAMAASADDFVKGCFTDSSHPPIKIHVNNESIQLDAAGRTMSLAF
Ga0307411_117416902	3300032005	Rhizosphere	MIGSFDFNMSCPCDDRLARIITDIVRQAAKDAGRDEAAAAAMAASADDFVKVCFTDTSHPPIRIHVNN
Ga0308173_116144471	3300032074	Soil	TGTFDFNMSCPCDGRLARIITDIVRQAAKDAGRDETAAAALAASADDFVRGCFTDGASQQPIKVHVNNESIKLDADGRTISLSL
Ga0310895_106674831	3300032122	Soil	TFDFNLSCPCDGRLAPIITDIVRQAARDAGRDDLATSAMVASADEFIRGCFADGASEPPIKVHVDSESIRLDAAGRTMSLAL
Ga0315912_1000124927	3300032157	Soil	MTGTFDFNISCPCDDRLARIITDIVRQAAKDAGRDEAAAAAMAASAQDFVSGCFADDTLPPIKMHVNNESIKLDAAGRTMSLAL
Ga0315912_101955112	3300032157	Soil	VTGTFDFNLSCPCDGRLARIITDIVRQAAKDAGRDEAAAAAMAASAEDFVRGCFAGDDAQPPIRIHVNNESIQVDAAGRTMSLAL
Ga0315912_102856352	3300032157	Soil	VTGTFDFNLTCPCDGRLARIITDIVRQAARDAGRDDASAAALAASADDFVQGCFSGGDTQPPIRIHVNNQSIQLDAAGRTMSLAL
Ga0364929_0096975_32_286	3300034149	Sediment	MTGSFDFNMSCPCDDRLARIITDIVRQAAKDAGRDDTAAAALAASADDFVRGCCTDASQPPIKMHVNNESIQLDAAGRTMSLAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F050447

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences