Metagenome / Metatranscriptome Family F049953

Basic Information
Family ID	F049953
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	40 residues
Representative Sequence	MFEEMVVSSPTSKKTNKPWTVVVSMLLQVAFLAILILIPL
Number of Associated Samples	137
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	95.89 %
% of genes from short scaffolds (< 2000 bps)	89.73 %
Associated GOLD sequencing projects	132
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (98.630 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.973 % of family members)
Environment Ontology (ENVO)	Unclassified (26.712 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.41% β-sheet: 0.00% Coil/Unstructured: 70.59%
Feature Viewer

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Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF02355	SecD_SecF	81.51
PF07549	Sec_GG	15.75
PF02699	YajC	1.37
PF01702	TGT	0.68
PF01618	MotA_ExbB	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG0341	Preprotein translocase subunit SecF	Intracellular trafficking, secretion, and vesicular transport [U]	97.26
COG0342	Preprotein translocase subunit SecD	Intracellular trafficking, secretion, and vesicular transport [U]	97.26
COG1862	Protein translocase subunit YajC	Intracellular trafficking, secretion, and vesicular transport [U]	1.37
COG0343	Queuine/archaeosine tRNA-ribosyltransferase	Translation, ribosomal structure and biogenesis [J]	0.68
COG1549	Archaeosine tRNA-ribosyltransferase, contains uracil-DNA-glycosylase and PUA domains	Translation, ribosomal structure and biogenesis [J]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.63 %
Unclassified	root	N/A	1.37 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.63 %
Unclassified	root	N/A	1.37 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.63 %
Unclassified	root	N/A	1.37 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	93.84 %
Unclassified	root	N/A	1.37 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	69.86 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13.70 %
Unclassified	root	N/A	1.37 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.86 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	12.33 %
Unclassified	root	N/A	1.37 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12.33 %
Unclassified	root	N/A	1.37 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.86 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.05 %
Unclassified	root	N/A	1.37 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10087164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300001867\|JGI12627J18819_10287011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300002906\|JGI25614J43888_10093506	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	808	Open in IMG/M
3300004268\|Ga0066398_10010113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1362	Open in IMG/M
3300004631\|Ga0058899_11992649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	523	Open in IMG/M
3300005175\|Ga0066673_10678617	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	595	Open in IMG/M
3300005332\|Ga0066388_101897358	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1063	Open in IMG/M
3300005332\|Ga0066388_105620551	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	635	Open in IMG/M
3300005334\|Ga0068869_101938828	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	528	Open in IMG/M
3300005542\|Ga0070732_10201103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1191	Open in IMG/M
3300005712\|Ga0070764_10783933	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	592	Open in IMG/M
3300005713\|Ga0066905_100752349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	841	Open in IMG/M
3300005764\|Ga0066903_108629610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	519	Open in IMG/M
3300005995\|Ga0066790_10455564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	547	Open in IMG/M
3300006028\|Ga0070717_10447686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1164	Open in IMG/M
3300006052\|Ga0075029_100365254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	932	Open in IMG/M
3300006052\|Ga0075029_101220780	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	526	Open in IMG/M
3300006052\|Ga0075029_101310148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300006059\|Ga0075017_101251833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300006102\|Ga0075015_100711531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300006163\|Ga0070715_10801248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300006174\|Ga0075014_100213407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	979	Open in IMG/M
3300006755\|Ga0079222_10282261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1070	Open in IMG/M
3300006871\|Ga0075434_101120771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300006903\|Ga0075426_10032711	All Organisms → cellular organisms → Bacteria	3717	Open in IMG/M
3300009012\|Ga0066710_103768263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300009090\|Ga0099827_10182730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1735	Open in IMG/M
3300009522\|Ga0116218_1300119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300010046\|Ga0126384_10200112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1580	Open in IMG/M
3300010048\|Ga0126373_11778131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300010104\|Ga0127446_1098331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300010107\|Ga0127494_1079062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300010359\|Ga0126376_12969990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300010360\|Ga0126372_10516635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1126	Open in IMG/M
3300010360\|Ga0126372_12665820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300010373\|Ga0134128_12987034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300010376\|Ga0126381_101483998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300011090\|Ga0138579_1098487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300012198\|Ga0137364_10194676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1484	Open in IMG/M
3300012205\|Ga0137362_10372603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1237	Open in IMG/M
3300012362\|Ga0137361_10184649	All Organisms → cellular organisms → Bacteria → Acidobacteria	1881	Open in IMG/M
3300012363\|Ga0137390_10507058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1180	Open in IMG/M
3300012363\|Ga0137390_11077265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300012582\|Ga0137358_10357328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	989	Open in IMG/M
3300012685\|Ga0137397_11019052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300012924\|Ga0137413_11687365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300012927\|Ga0137416_11884633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300012929\|Ga0137404_10061872	All Organisms → cellular organisms → Bacteria → Acidobacteria	2906	Open in IMG/M
3300012957\|Ga0164303_10326953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300012989\|Ga0164305_11923000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300013296\|Ga0157374_12025342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300014200\|Ga0181526_10288744	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300014201\|Ga0181537_10755561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300015051\|Ga0137414_1252841	All Organisms → cellular organisms → Bacteria → Acidobacteria	4229	Open in IMG/M
3300015052\|Ga0137411_1062270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300015053\|Ga0137405_1270060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300015242\|Ga0137412_10908371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300015359\|Ga0134085_10428457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300016341\|Ga0182035_10188486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1621	Open in IMG/M
3300016357\|Ga0182032_10533709	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300016371\|Ga0182034_10519972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300016422\|Ga0182039_11603913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300016445\|Ga0182038_11214819	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	672	Open in IMG/M
3300017926\|Ga0187807_1258465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300017943\|Ga0187819_10507799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300018057\|Ga0187858_10804846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300018058\|Ga0187766_10839958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300018090\|Ga0187770_10458495	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300018090\|Ga0187770_11066039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300018433\|Ga0066667_10263257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1316	Open in IMG/M
3300019877\|Ga0193722_1018607	All Organisms → cellular organisms → Bacteria → Acidobacteria	1791	Open in IMG/M
3300019883\|Ga0193725_1032179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1396	Open in IMG/M
3300019887\|Ga0193729_1009111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4544	Open in IMG/M
3300020579\|Ga0210407_10034826	All Organisms → cellular organisms → Bacteria → Acidobacteria	3744	Open in IMG/M
3300020579\|Ga0210407_11038835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300020583\|Ga0210401_10131211	All Organisms → cellular organisms → Bacteria → Acidobacteria	2348	Open in IMG/M
3300021170\|Ga0210400_11543538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300021307\|Ga0179585_1131831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300021402\|Ga0210385_10061632	All Organisms → cellular organisms → Bacteria → Acidobacteria	2534	Open in IMG/M
3300021432\|Ga0210384_10068859	All Organisms → cellular organisms → Bacteria → Acidobacteria	3188	Open in IMG/M
3300021559\|Ga0210409_10176757	All Organisms → cellular organisms → Bacteria → Acidobacteria	1950	Open in IMG/M
3300021559\|Ga0210409_10861156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300021560\|Ga0126371_11851916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300021861\|Ga0213853_10543280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300022504\|Ga0242642_1097876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300022531\|Ga0242660_1229901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300022712\|Ga0242653_1108754	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300024186\|Ga0247688_1053994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300024283\|Ga0247670_1070053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300025460\|Ga0208562_1047304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300025910\|Ga0207684_10536096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300025939\|Ga0207665_10908863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300026089\|Ga0207648_11888911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300026304\|Ga0209240_1113031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	946	Open in IMG/M
3300026310\|Ga0209239_1340762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300026317\|Ga0209154_1045804	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1963	Open in IMG/M
3300026342\|Ga0209057_1080281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1383	Open in IMG/M
3300026351\|Ga0257170_1044254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300026374\|Ga0257146_1006220	All Organisms → cellular organisms → Bacteria → Acidobacteria	1950	Open in IMG/M
3300026469\|Ga0257169_1041770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300026490\|Ga0257153_1024703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1235	Open in IMG/M
3300026538\|Ga0209056_10106605	All Organisms → cellular organisms → Bacteria → Acidobacteria	2267	Open in IMG/M
3300026542\|Ga0209805_1116671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1264	Open in IMG/M
3300026551\|Ga0209648_10381012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300027002\|Ga0209110_1040922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300027104\|Ga0208095_1007388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300027297\|Ga0208241_1029426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300027537\|Ga0209419_1071283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300027671\|Ga0209588_1261807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300027862\|Ga0209701_10159879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1369	Open in IMG/M
3300028047\|Ga0209526_10337874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300028731\|Ga0302301_1061794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300028747\|Ga0302219_10010680	All Organisms → cellular organisms → Bacteria	3443	Open in IMG/M
3300028792\|Ga0307504_10290896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300028806\|Ga0302221_10138215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1074	Open in IMG/M
3300030730\|Ga0307482_1146284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300030842\|Ga0075404_11441712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300030855\|Ga0075374_11439672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300030916\|Ga0075386_12029393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300030946\|Ga0075379_11458847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300031545\|Ga0318541_10057565	All Organisms → cellular organisms → Bacteria → Acidobacteria	2011	Open in IMG/M
3300031545\|Ga0318541_10479645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300031668\|Ga0318542_10157577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300031740\|Ga0307468_100581771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300031753\|Ga0307477_10198865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1394	Open in IMG/M
3300031771\|Ga0318546_10787417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300031777\|Ga0318543_10178158	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300031792\|Ga0318529_10318143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300031799\|Ga0318565_10376054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300031820\|Ga0307473_10175881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1246	Open in IMG/M
3300031821\|Ga0318567_10350745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300031823\|Ga0307478_10281185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1359	Open in IMG/M
3300031910\|Ga0306923_10100602	All Organisms → cellular organisms → Bacteria → Acidobacteria	3261	Open in IMG/M
3300031942\|Ga0310916_11435963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300031946\|Ga0310910_10633528	Not Available	847	Open in IMG/M
3300031962\|Ga0307479_10053959	All Organisms → cellular organisms → Bacteria	3869	Open in IMG/M
3300032051\|Ga0318532_10208417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300032059\|Ga0318533_11136121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300032060\|Ga0318505_10506518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300032205\|Ga0307472_102111104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300032828\|Ga0335080_10441436	Not Available	1390	Open in IMG/M
3300032954\|Ga0335083_10952390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300033158\|Ga0335077_10166156	All Organisms → cellular organisms → Bacteria → Acidobacteria	2516	Open in IMG/M
3300033289\|Ga0310914_11581910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300033977\|Ga0314861_0016741	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4801	Open in IMG/M
3300034125\|Ga0370484_0154842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.58%
Host-Associated	Host-Associated	3.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.67%
Aquatic	Environmental → Aquatic	8.90%
Plants	Host-Associated → Plants	3.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.62%
Freshwater	Environmental → Aquatic → Freshwater	4.79%
Sediment	Environmental → Aquatic → Sediment	4.11%
Peat	Environmental → Terrestrial → Peat	2.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.37%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.44%
Loam	Environmental → Terrestrial → Soil → Loam	13.01%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.37%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.05%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.05%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.37%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.05%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.05%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.37%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.37%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.37%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.37%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.68%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.68%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010104	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010107	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011090	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027002	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030842	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030946	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049953

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_100871642	3300001471	Forest Soil	MFDEMVVSSPNPKKTNKPWTVILSMIFQVAFLAVLILIPLI
JGI12627J18819_102870111	3300001867	Forest Soil	MFEDMVVSSSNPTKTNKPWTVVLSMLFQVVFLGVLILI
JGI25614J43888_100935062	3300002906	Grasslands Soil	MFEEMVVSTSSNKKTNKPWTVVMSMIVQVTFLAVLILIPLI
Ga0066398_100101131	3300004268	Tropical Forest Soil	MFDELVESSPTKKKTNKPWAIFVSTLVQVGLLSILILIPL
Ga0058899_119926492	3300004631	Forest Soil	MFEEMVVSNQKNKKTNKPWTVILSMLFQVGFLAILILIPLIYTE
Ga0066673_106786171	3300005175	Soil	MFEEMVVSSPKSKKTNKPWTVVMSMVLQATFLAVLILIPLIY
Ga0066388_1018973582	3300005332	Tropical Forest Soil	MFEEMVVSSPRGKKTNKPWTVILSGVVQATLLAVLILIPLIYTEA
Ga0066388_1056205511	3300005332	Tropical Forest Soil	MFEEMVVSSPKGKKTNKSWTVILSGIVQATFLAVLILIPLIY
Ga0068869_1019388282	3300005334	Miscanthus Rhizosphere	MFEEMVVSSPKGKKTNKPWTVILSGVVQATFLAVLILIPLIYT
Ga0070732_102011031	3300005542	Surface Soil	MFEEMVVSSPHPSRTNKPWTVVVSMVAQSIFLAILIL
Ga0070764_107839331	3300005712	Soil	MFEEMVVSTSQAKKTNKPTTVLVSMILQVGFLAILILIPLIYTEAL
Ga0066905_1007523491	3300005713	Tropical Forest Soil	MFEEMVVSSQTNKKTNKPWTVALSMFIQCALLGILILIPLIY
Ga0066903_1086296102	3300005764	Tropical Forest Soil	MFEEMVVSSPKSKKTNKPWTVIVSGVLQATFLTVLILIPLIYTEAL
Ga0066790_104555641	3300005995	Soil	MFEDMVVSSSNPSKTNKPWTVILSMLAQVTFLGILILIPLIY
Ga0070717_104476862	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MFEDMVVSSPHPSKTNKPWTVVVSMIAQTIFLGILILIPLIY
Ga0075029_1003652541	3300006052	Watersheds	MFEEMVISSPNPKKTNKPWTVLISMLFQCLFLLILILIPL
Ga0075029_1012207801	3300006052	Watersheds	MFDEMVVSSPNPKGTNKWWTVIVSSAFQVGFLAILILIPLIYTE
Ga0075029_1013101482	3300006052	Watersheds	MFEEMVISSPNPKKTNKPWTVLISMLFQCLFLLILILI
Ga0075017_1012518331	3300006059	Watersheds	MFEEMVVSNPKSKKTNKPWTVFISMALQVTFLTVLILI
Ga0075015_1007115312	3300006102	Watersheds	MFEEMVVSNAKNKKTNKPWTVAISMVLQIAFLALLILI
Ga0070715_108012481	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MFEDMVVSSSNPSKTNKPWTVVLSMVAQVLFLGILIL
Ga0075014_1002134071	3300006174	Watersheds	MFEEMVVSSPNPTKTNKPFTVLISMVIQILCVAILILIPLIY
Ga0079222_102822611	3300006755	Agricultural Soil	MFEDMVVSSPHPSKTNKPWTVMVSMVAQTIFLAILILI
Ga0075434_1011207712	3300006871	Populus Rhizosphere	MFEEMVVSSPTSKKTNKPWTVVVSMLLQVAFLAILILIPL
Ga0075426_100327114	3300006903	Populus Rhizosphere	MFEEMVISSPNPKKTNKPWTVVVSMIFQVAFLGILI
Ga0066710_1037682631	3300009012	Grasslands Soil	MFEEMVVSSPTSKKTNKPWTVVISMLLQVTFLGILI
Ga0099827_101827301	3300009090	Vadose Zone Soil	MFEDLVESSPIPKKTNKPWTIVVSTLLQVTLLGVLIL
Ga0116218_13001192	3300009522	Peatlands Soil	MFEEMVVSSPKSKKTNKPWTVVVSMIVQIFFVVVLILIPL
Ga0126384_102001121	3300010046	Tropical Forest Soil	MFEDMVVSSSNPTKTNKSWTVMLSMLFQILFLAILI
Ga0126373_117781311	3300010048	Tropical Forest Soil	MFEDMVVSGAQGAKTNKPWTVVVSMVFQIVFLGVL
Ga0127446_10983312	3300010104	Grasslands Soil	MFEEMVISSPNPKKTNKPWTVVVSMIFQVAFLGIL
Ga0127494_10790621	3300010107	Grasslands Soil	MFEEMVVSSPNPKKTNKPWTVVISMLFQVAFLSILILIPLIYT
Ga0126376_129699901	3300010359	Tropical Forest Soil	MFEEMVVSTSSNKKTNKPWTVFVSMAVQVLFLGILILIPLI
Ga0126372_105166351	3300010360	Tropical Forest Soil	MFEEMVVSSPKGKKTNKSWTVILSGVVQATFLAVLILI
Ga0126372_126658201	3300010360	Tropical Forest Soil	MFEEMVVSSANPTKTNKPWTVVLSTLVQVAILAILV
Ga0134128_129870341	3300010373	Terrestrial Soil	MFEDMVVSSSNPTKTNKPWTVVLSMLFQVLFLGVLLFIPQIY
Ga0126381_1014839981	3300010376	Tropical Forest Soil	MFEDMVVSSSNPTKTNKPWTVMLSMIFQLAFLGILILIP
Ga0138579_10984871	3300011090	Peatlands Soil	MFEEMVVSTTMKKTNKPWTIMLSMVFQVLFLAILVLI
Ga0137364_101946761	3300012198	Vadose Zone Soil	MFEEMVVSSPRSKKTNKPWTVVISMLLQVTFLGILIL
Ga0137362_103726032	3300012205	Vadose Zone Soil	MFEEMVVSSPKTKKTNKPWTVILSMVLQATFLAILILIPLIY
Ga0137361_101846491	3300012362	Vadose Zone Soil	MFEEMVVSSPKSKKTNKPWTVVLSMTVQAAFLAILILIP
Ga0137390_105070581	3300012363	Vadose Zone Soil	MFEEMVISSPNPKKTNKPWTVFFSMLFQLAFLGIL
Ga0137390_110772651	3300012363	Vadose Zone Soil	MFEDMVVSSNNPSKTNKPWTVVLSMLFQVVFLGVLIL
Ga0137358_103573282	3300012582	Vadose Zone Soil	MFEEMVVSSPHPNKTNKPWTVVVSMVAQTIFLAILILIPLI
Ga0137397_110190521	3300012685	Vadose Zone Soil	MFEEMVVSSPKSKKTNKPWTVVMSMVLQATFLAVLILIPLIYTEA
Ga0137413_116873651	3300012924	Vadose Zone Soil	MFEDMVVSSSNPSKTNKPWTVILSMLFQVLFLAILILI
Ga0137416_118846331	3300012927	Vadose Zone Soil	MFEEMVVSSPKTKKTNKPWTVIMSMVLQAGFLAVLI
Ga0137404_100618721	3300012929	Vadose Zone Soil	MFEEMVISSPNPKKTNKPWTVLVSMAFQCLFLFILILIP
Ga0164303_103269531	3300012957	Soil	MFEEMVVSSPTSKKTNKPWTVVISMLLQVGFLVIIVFIPLIYSEALTKGML
Ga0164305_119230001	3300012989	Soil	MFEEMVVSTKTKKTNKPWTVVMSMLVQAGFLAVLILIP
Ga0157374_120253422	3300013296	Miscanthus Rhizosphere	MFEDMVVSSNNPTKTNKPWTVVLSMLAQVLFLGILILIPLIYT
Ga0181526_102887442	3300014200	Bog	MFEEMVVSTTMKKTNKPWTIMLSMVFQVLFLAILV
Ga0181537_107555611	3300014201	Bog	MFEDMVVSTSTAVKTNKPWTVVLSFVFQAGFLAVLILI
Ga0137414_12528417	3300015051	Vadose Zone Soil	MFEEMVVSSPTSKKTNKPWTVVISMLLQVTFLAILILIR*
Ga0137411_10622702	3300015052	Vadose Zone Soil	MFEDMVISSPNPQKTNKPWTVVVSMIAQMIFLSILILIPLIY
Ga0137405_12700602	3300015053	Vadose Zone Soil	MFEEMVVSSPTSKKTNKPWTVMLSMIIQCAFLGILILIPLI
Ga0137412_109083711	3300015242	Vadose Zone Soil	MFEEMVVSTSTNQKTNKPWTVAISMIFQVLFLSIL
Ga0134085_104284571	3300015359	Grasslands Soil	MFDEMVVSSPHPTRTKKPMTVVLSAVFQLAFLGIL
Ga0182035_101884861	3300016341	Soil	MFEEMVVSSPKGKKTNKPWTVVVSGVVQAVFLAVLILIPLIYTEA
Ga0182032_105337092	3300016357	Soil	MFEEMVVSNQKNKKTNKPWTVVLSMLFQVAFLAILILIPL
Ga0182034_105199722	3300016371	Soil	MFEEMVVSNQKNKKTNKPWTVVLSMLLQVGFLAILIL
Ga0182039_116039131	3300016422	Soil	MFEEMVVSSPKGKKTNKSWTVILSGIVQVAFLAVLIL
Ga0182038_112148192	3300016445	Soil	MFEEMVVSNQKNKKTNKPWTVVLSMLFQVAFLAILILIPVM
Ga0187807_12584652	3300017926	Freshwater Sediment	MFEEMVESTVGGKKKTNKSWTVFLYMLFQVGFLAILILIPLI
Ga0187819_105077991	3300017943	Freshwater Sediment	MFEEMVESTVGSKKRTNKRYTVVLSMAFQVAFLAILILIPLI
Ga0187858_108048462	3300018057	Peatland	MFEDMVVSSANPSKTNKPWTVVLSMVAQVVFLGILILIPLI
Ga0187766_108399581	3300018058	Tropical Peatland	MFEEMVVSSPKSKKTNKPWTVVVSMAVQVFFLLILILIPLIYTE
Ga0187770_104584951	3300018090	Tropical Peatland	MFEEMVESTVGSRKRTNNRYTMMVSMALQVGFLAILILIP
Ga0187770_110660392	3300018090	Tropical Peatland	MFEEMVESTVGRKKRTNNRYTMMLSMALQVGLLAILIPIPLSYT
Ga0066667_102632572	3300018433	Grasslands Soil	MFEEMVISSPNPKKTNKTWTVFLSMVFQVVFLGMLILI
Ga0193722_10186073	3300019877	Soil	MFDEMVVSSPNSKRTNKPWTVILSMIFQTAFLAVLILIPL
Ga0193725_10321793	3300019883	Soil	MFEEMVVSSPKSKKTNKPWTVILSMVLQATFLAILILIPLIYT
Ga0193729_10091111	3300019887	Soil	MFDEMVVSSPNPKKTNKPWTVVLSMIFQVAFLAVLILIP
Ga0210407_100348261	3300020579	Soil	MFEEMVISSPNPKKTNKPWTVVVSMLAQVGFLAILILIPL
Ga0210407_110388351	3300020579	Soil	MFEEMVVSTSSNKKTNKPWTVFISMALQVTFLAVLILIPLIYT
Ga0210401_101312113	3300020583	Soil	MFEEMVVSNQKNKKTNKPWTVILSMLFQVGFLAILILIP
Ga0210400_115435382	3300021170	Soil	MFEEMVISSPNPKKTNKPWTVLVSMLFQVGFLVILILIPLI
Ga0179585_11318311	3300021307	Vadose Zone Soil	MFEDMVVSSPHPSKTNKPWTVVVSMIAQKIFLAILILIPL
Ga0210385_100616323	3300021402	Soil	MFEEMVVSNPKNKATNKPWTVIVSMALQVGFLAILILIPL
Ga0210384_100688593	3300021432	Soil	MFSDLVVSSPNPSKTNKPWTVVVSMVLQTFFLGILILIPL
Ga0210409_101767573	3300021559	Soil	MFEEMVISSPNPKKTNKPWTVALSMLFQVAFLGILILIPLIYT
Ga0210409_108611561	3300021559	Soil	MFEEMVVSTSQAKKTHKPTTVLVSMILQVGFLAILILIP
Ga0126371_118519162	3300021560	Tropical Forest Soil	MFEEMVVSNQKNKKTNKSWTVMLSMIFQVAFLAILILIP
Ga0213853_105432801	3300021861	Watersheds	MFEELVVSSPSEKKTNKPWTVFISMAVQVLFLAILI
Ga0242642_10978762	3300022504	Soil	MFEDLVVSSPHPTKTKKPMTVMISLLVQVGFLAILILIPLIYT
Ga0242660_12299012	3300022531	Soil	MFEELVVSSPTEKKTNKPWTVVISMTIQVLFLAILILI
Ga0242653_11087542	3300022712	Soil	MFEEMVVSTSTNKKTNKPWTVVISMAFQVGFLAILILIPLIIRKPCRRR
Ga0247688_10539941	3300024186	Soil	MFEEMVVSSPTSKKTNKPWTVVISMLLQVGFLFILVLIPLIY
Ga0247670_10700532	3300024283	Soil	MFEEMVVSSPTSKKTNKPWTVVISMLLQVTFLGILILIPLIYTE
Ga0208562_10473041	3300025460	Peatland	MFEELVVSGAKEKTNKPWTVVVSMILQVFFLVILILIPL
Ga0207684_105360962	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MFEEMVVSSPNPKKTNKPWTVVISMLFQVAFLSIL
Ga0207665_109088632	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MFEEMVVSTSTNTKTNKPWTVFISMAVQVVFLAILILI
Ga0207648_118889112	3300026089	Miscanthus Rhizosphere	MFEEMVVSSPKGKKTNKPWTVILSGIVQATFLAVLIL
Ga0209240_11130312	3300026304	Grasslands Soil	MFEEMVVSSPKSKKTNKPWTVILSMVLQATFLAILILIPLIY
Ga0209239_13407621	3300026310	Grasslands Soil	MFEEMVVSSPHPTKTKKPITVLLSAVFQLVFLGILILIPLIY
Ga0209154_10458042	3300026317	Soil	MFEEMVISSPNPKKTNKPWAVVVSMLFQVAFLGILILIPLIFRRP
Ga0209057_10802811	3300026342	Soil	MFEEMVVSSPHPTKTKKPITVLLSAVFQLVFLGILILIPLNYTEAL
Ga0257170_10442542	3300026351	Soil	MFEEMVVSSPKSKKTNKPWTVILSMVLQATFLAILILIPLIYTE
Ga0257146_10062201	3300026374	Soil	MFEEMVVSTSTNKKTNKPWTVFISMAVQVLFLAILI
Ga0257169_10417701	3300026469	Soil	MFEEMVVSSPNPKKTNKPWTVVISMLFQVAFLSILILIPLI
Ga0257153_10247032	3300026490	Soil	MFEEMVVSSPKSKKTNKPWTVILSMVLQATFLAILILI
Ga0209056_101066053	3300026538	Soil	MFEEMVISSPNPKKTNKTWTVFLSMVFQVVFLGMLI
Ga0209805_11166711	3300026542	Soil	MFEEMVISSPNPKKTSKPWTVFLSMVFEVAFLGILILI
Ga0209648_103810122	3300026551	Grasslands Soil	MFEEMVVSSPKSKKTNKPWTVILSMVLQATFLAILILIPLIYTEA
Ga0209110_10409221	3300027002	Forest Soil	MFEDMVVSSSNPTKTNKPWTVVLSMLFQVVFLGVLILIPLIY
Ga0208095_10073882	3300027104	Forest Soil	MFDEMVVSSPNPKGTNKPWTVVLSMVFQVAFLAILILIPLIYTEAL
Ga0208241_10294261	3300027297	Forest Soil	MFDEMVVSSPNPKGTNKPWTVVLSMLFQVAFLAILILIP
Ga0209419_10712832	3300027537	Forest Soil	MFEDMVVSSSNPSKTNKPWTVVLSMLAQVLFLGILILIPLIY
Ga0209588_12618071	3300027671	Vadose Zone Soil	MFEEMVVSTSTNQKTNKPWTVAISMLFQVLFLAILILIPLI
Ga0209701_101598791	3300027862	Vadose Zone Soil	MFEEMVVSNVTNKKTNKPWTVVLSMLFQVGFVALL
Ga0209526_103378742	3300028047	Forest Soil	MFDEMVVSSPNPKKTNKPWTVILSMIFQVAFLAVLILIPLIYTE
Ga0302301_10617942	3300028731	Palsa	MFEDMVVSGANPTKTNKPWTVVLSMLFQVLFLAVLILIPLIY
Ga0302219_100106804	3300028747	Palsa	MFEDMVVSGANPTKTNKPWTVVLSMLFQVLFLAVLILIPLIYTE
Ga0307504_102908961	3300028792	Soil	MFEEMVISSPNPKKTNKPWTVFLSMVFQVAFLGILILIPLI
Ga0302221_101382151	3300028806	Palsa	MFEDMVVSGANPTKTNKPWTVVLSMLFQVLFLAVLIL
Ga0307482_11462841	3300030730	Hardwood Forest Soil	MFEDMVVSSPHPAKTNKPWTVVVSMVAQMIFLAILILIP
Ga0075404_114417121	3300030842	Soil	MFEEMVVSSPKSKKTNKPWTVILSMVLQATFLAILIL
Ga0075374_114396721	3300030855	Soil	MFEEMVVSTSTNTKTNKPWTVFISMAVQVLFLAILIL
Ga0075386_120293932	3300030916	Soil	MFEDMVVSSSNPTKTNKPWTVILSMLFQVLFLGVLIL
Ga0075379_114588471	3300030946	Soil	MFEEMVVSSPKSKKTNKPWTVILSMVLQAAFLAILILIPLIYT
Ga0318541_100575651	3300031545	Soil	MFEEMVESTVASKKRTKQRYTVALSMVAQVAFLAILILIP
Ga0318541_104796452	3300031545	Soil	MFEEMVVSSPKGKKTNKPWTVVLSGVVQAAFLAVLILIPLIYTE
Ga0318542_101575772	3300031668	Soil	MFEEMVVSSPRGKKTNKGWTVILSGVVQATLLAVLILI
Ga0307468_1005817712	3300031740	Hardwood Forest Soil	MFEQLVVSSPNPAKTNKPWTVAVSMIAQTIFLAILILIPL
Ga0307477_101988652	3300031753	Hardwood Forest Soil	MFEDMVVSSPHPLKTNKPWTVVVSMIAQMIFLGILILI
Ga0318546_107874171	3300031771	Soil	MFEEMVVSNVKNKKTNKPWTVVLSMLLQVGFLAILILI
Ga0318543_101781581	3300031777	Soil	MFEEMVVSNAKNKKTNKPWTVVLSMLLQVGFLAILILI
Ga0318529_103181432	3300031792	Soil	MFEEMVVSNVKNKKTNKPWTVVLSMLLQVGFLAILI
Ga0318565_103760542	3300031799	Soil	MFEEMVVSSPKGKKTNKPWTVVLSGVVQAAFLAVLILI
Ga0307473_101758811	3300031820	Hardwood Forest Soil	MFEEMVISTGPKKTNKPWTVVVSMLLQVGFLSILILIPLIYT
Ga0318567_103507451	3300031821	Soil	MFEEMVVSNAKNKKTNKPWTVILSMLLQVGFLAILIL
Ga0307478_102811852	3300031823	Hardwood Forest Soil	MFEEMVISSPNPKKTNKPWTVLISMLFQCLFLLILILIPLIYT
Ga0306923_101006021	3300031910	Soil	MFEEMVVSNVKNKKTNKPWTVVLSMLLQVGFLAILILIPL
Ga0310916_114359632	3300031942	Soil	MFEEMVVSNAKNKKTNKPWTVILSMLLQVGFLAILILIPLI
Ga0310910_106335281	3300031946	Soil	MFEEMVVSSPHPTKTNKWWTVLVSSAFQIAFLGVLILIP
Ga0307479_100539594	3300031962	Hardwood Forest Soil	MFEEMVVSSPKSKKTNKPWTVVLSMTVQAAFLAIL
Ga0318532_102084172	3300032051	Soil	MFEEMVVSSPKGKKTNKSWTVILSGIVQVAFLAVLILIPLIYT
Ga0318533_111361212	3300032059	Soil	MFEEMVVSSPKGKKTNKPWTVVLSGVVQAAFLAVLILIPLIY
Ga0318505_105065181	3300032060	Soil	MFEEMVVSSPRGKKTNKGWTVILSGVVQATLLAVLILIP
Ga0307472_1021111041	3300032205	Hardwood Forest Soil	MFEEMVVSSPKGKKTNKSWTVIVSGIVQATFLAVL
Ga0335080_104414362	3300032828	Soil	MFEEMVLSSPNRKKTNKPWTVVLSMAVQCLFVFILVLIPLIY
Ga0335083_109523902	3300032954	Soil	MFEEMVVSSQTNKKTNKSWTVLISSLIQIGLVGILILIPLIY
Ga0335077_101661563	3300033158	Soil	MFEEMVISSAKGKKTNKPWTVFISMVLQVFLLAVLILIP
Ga0310914_115819101	3300033289	Soil	MFEEMVVSSTNPTKTNKPWTVVLSMLVQIAVLAVLI
Ga0314861_0016741_1_123	3300033977	Peatland	MFEDLLVSSSSVKTNTRWTVVVSTIVQSILLAILILIPLVY
Ga0370484_0154842_509_616	3300034125	Untreated Peat Soil	MFDEMVVSSPNPKKTNKPWTVILSMIFQVAFLAVLI

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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