Metagenome / Metatranscriptome Family F049837

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049837
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	89 residues
Representative Sequence	MIPFFLYLAAGAVTGFHVYTLLMLAVLGAPVDPLELVSLVGSLCLIVAAYLSLFKPHAAARLALLASLAIWCFYGPAIARTVGWF
Number of Associated Samples	109
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.52 %
% of genes near scaffold ends (potentially truncated)	35.62 %
% of genes from short scaffolds (< 2000 bps)	69.86 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.397 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (16.438 % of family members)
Environment Ontology (ENVO)	Unclassified (26.712 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.164 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.72% β-sheet: 0.00% Coil/Unstructured: 36.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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SCOP family	SCOP domain	Representative PDB	TM-score
e.18.1.1: Nickel-iron hydrogenase, large subunit	d6z8mb_	6z8m	0.71561
a.29.6.1: Plant invertase/pectin methylesterase inhibitor	d2cj4a_	2cj4	0.71523
a.29.6.1: Plant invertase/pectin methylesterase inhibitor	d1x91a_	1x91	0.71026
e.18.1.0: automated matches	d5aa5c_	5aa5	0.69377
e.18.1.1: Nickel-iron hydrogenase, large subunit	d4u9hl_	4u9h	0.69082

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF02321	OEP	41.10
PF00873	ACR_tran	8.90
PF13180	PDZ_2	2.05
PF00072	Response_reg	1.37
PF16576	HlyD_D23	1.37
PF00294	PfkB	0.68
PF00912	Transgly	0.68
PF01522	Polysacc_deac_1	0.68
PF13620	CarboxypepD_reg	0.68
PF13360	PQQ_2	0.68
PF00248	Aldo_ket_red	0.68
PF00374	NiFeSe_Hases	0.68
PF00480	ROK	0.68
PF00082	Peptidase_S8	0.68
PF12704	MacB_PCD	0.68
PF00032	Cytochrom_B_C	0.68
PF13193	AMP-binding_C	0.68
PF01545	Cation_efflux	0.68
PF13365	Trypsin_2	0.68
PF07679	I-set	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	82.19
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.37
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.68
COG0374	Ni,Fe-hydrogenase I large subunit	Energy production and conversion [C]	0.68
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.68
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.68
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.68
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	0.68
COG3259	Coenzyme F420-reducing hydrogenase, alpha subunit	Energy production and conversion [C]	0.68
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.68
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.68
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.40 %
Unclassified	root	N/A	22.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.40 %
Unclassified	root	N/A	22.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.40 %
Unclassified	root	N/A	22.60 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	56.85 %
Unclassified	root	N/A	22.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.60 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	21.23 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.60 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	18.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.64 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.60 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.64 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.60 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.64 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.60 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.64 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	1.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.60 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.64 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10003691	All Organisms → cellular organisms → Bacteria	10924	Open in IMG/M
3300001082\|JGI12664J13189_1000532	All Organisms → cellular organisms → Bacteria	5343	Open in IMG/M
3300001593\|JGI12635J15846_10049159	All Organisms → cellular organisms → Bacteria → Acidobacteria	3229	Open in IMG/M
3300003218\|JGI26339J46600_10029795	Not Available	1542	Open in IMG/M
3300003505\|JGIcombinedJ51221_10026171	All Organisms → cellular organisms → Bacteria → Acidobacteria	2090	Open in IMG/M
3300004152\|Ga0062386_100383673	All Organisms → cellular organisms → Bacteria → Acidobacteria	1129	Open in IMG/M
3300005526\|Ga0073909_10400098	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300005529\|Ga0070741_10007225	All Organisms → cellular organisms → Bacteria	23190	Open in IMG/M
3300005537\|Ga0070730_10006669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9850	Open in IMG/M
3300005541\|Ga0070733_10061730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2353	Open in IMG/M
3300005541\|Ga0070733_10205426	All Organisms → cellular organisms → Bacteria → Acidobacteria	1289	Open in IMG/M
3300005541\|Ga0070733_10329724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1011	Open in IMG/M
3300005602\|Ga0070762_10700973	Not Available	679	Open in IMG/M
3300005610\|Ga0070763_10262369	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300005921\|Ga0070766_10071779	All Organisms → cellular organisms → Bacteria → Acidobacteria	1995	Open in IMG/M
3300005921\|Ga0070766_10086933	All Organisms → cellular organisms → Bacteria → Acidobacteria	1829	Open in IMG/M
3300005921\|Ga0070766_10297011	All Organisms → cellular organisms → Bacteria → Acidobacteria	1036	Open in IMG/M
3300006052\|Ga0075029_100004162	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8040	Open in IMG/M
3300006052\|Ga0075029_100461594	All Organisms → cellular organisms → Bacteria → Acidobacteria	834	Open in IMG/M
3300006059\|Ga0075017_100143231	All Organisms → cellular organisms → Bacteria → Acidobacteria	1697	Open in IMG/M
3300006059\|Ga0075017_100389170	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300006162\|Ga0075030_100070463	All Organisms → cellular organisms → Bacteria	2881	Open in IMG/M
3300006162\|Ga0075030_100253680	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300006174\|Ga0075014_100262036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300006174\|Ga0075014_100466674	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300009521\|Ga0116222_1414146	Not Available	587	Open in IMG/M
3300009521\|Ga0116222_1441930	Not Available	567	Open in IMG/M
3300009525\|Ga0116220_10589576	Not Available	510	Open in IMG/M
3300009623\|Ga0116133_1024340	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300009636\|Ga0116112_1182059	Not Available	584	Open in IMG/M
3300009643\|Ga0116110_1002952	All Organisms → cellular organisms → Bacteria → Acidobacteria	8235	Open in IMG/M
3300009643\|Ga0116110_1106403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300009672\|Ga0116215_1383129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	609	Open in IMG/M
3300009824\|Ga0116219_10018528	All Organisms → cellular organisms → Bacteria → Acidobacteria	4331	Open in IMG/M
3300009839\|Ga0116223_10723646	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300010339\|Ga0074046_10033535	All Organisms → cellular organisms → Bacteria	3491	Open in IMG/M
3300010341\|Ga0074045_10460741	Not Available	820	Open in IMG/M
3300010343\|Ga0074044_10136633	All Organisms → cellular organisms → Bacteria → Acidobacteria	1643	Open in IMG/M
3300010379\|Ga0136449_100171667	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4195	Open in IMG/M
3300010379\|Ga0136449_100483830	All Organisms → cellular organisms → Bacteria → Acidobacteria	2157	Open in IMG/M
3300010379\|Ga0136449_100999397	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1347	Open in IMG/M
3300010379\|Ga0136449_101074267	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300010379\|Ga0136449_101215058	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300010379\|Ga0136449_104046869	Not Available	547	Open in IMG/M
3300010379\|Ga0136449_104390325	Not Available	520	Open in IMG/M
3300010937\|Ga0137776_1266443	All Organisms → cellular organisms → Bacteria → Acidobacteria	1299	Open in IMG/M
3300014158\|Ga0181521_10588469	Not Available	523	Open in IMG/M
3300014162\|Ga0181538_10268738	Not Available	934	Open in IMG/M
3300014200\|Ga0181526_10294855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1033	Open in IMG/M
3300014489\|Ga0182018_10004028	All Organisms → cellular organisms → Bacteria	12668	Open in IMG/M
3300014501\|Ga0182024_10000260	All Organisms → cellular organisms → Bacteria → Acidobacteria	131494	Open in IMG/M
3300014501\|Ga0182024_10002441	All Organisms → cellular organisms → Bacteria	46027	Open in IMG/M
3300014501\|Ga0182024_10098662	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4264	Open in IMG/M
3300014501\|Ga0182024_10490448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1565	Open in IMG/M
3300016702\|Ga0181511_1385901	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	676	Open in IMG/M
3300016750\|Ga0181505_10157740	All Organisms → cellular organisms → Bacteria → Acidobacteria	1719	Open in IMG/M
3300016750\|Ga0181505_10308058	Not Available	629	Open in IMG/M
3300017823\|Ga0187818_10000352	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16055	Open in IMG/M
3300017823\|Ga0187818_10025803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2516	Open in IMG/M
3300017823\|Ga0187818_10199211	All Organisms → cellular organisms → Bacteria → Acidobacteria	874	Open in IMG/M
3300017924\|Ga0187820_1252516	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300017929\|Ga0187849_1056840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1797	Open in IMG/M
3300017933\|Ga0187801_10250679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300017933\|Ga0187801_10274201	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300017934\|Ga0187803_10023117	All Organisms → cellular organisms → Bacteria	2478	Open in IMG/M
3300017935\|Ga0187848_10148138	Not Available	1035	Open in IMG/M
3300017936\|Ga0187821_10428321	Not Available	545	Open in IMG/M
3300017942\|Ga0187808_10349864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	671	Open in IMG/M
3300017943\|Ga0187819_10027342	All Organisms → cellular organisms → Bacteria	3351	Open in IMG/M
3300017946\|Ga0187879_10011916	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5519	Open in IMG/M
3300017955\|Ga0187817_10095078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1871	Open in IMG/M
3300017993\|Ga0187823_10328298	Not Available	539	Open in IMG/M
3300018001\|Ga0187815_10196547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	854	Open in IMG/M
3300018002\|Ga0187868_1307076	Not Available	522	Open in IMG/M
3300018006\|Ga0187804_10521592	Not Available	535	Open in IMG/M
3300018012\|Ga0187810_10030929	All Organisms → cellular organisms → Bacteria → Acidobacteria	1964	Open in IMG/M
3300018015\|Ga0187866_1015999	All Organisms → cellular organisms → Bacteria	3990	Open in IMG/M
3300018019\|Ga0187874_10386070	Not Available	565	Open in IMG/M
3300018034\|Ga0187863_10311653	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	875	Open in IMG/M
3300018034\|Ga0187863_10907376	Not Available	500	Open in IMG/M
3300020579\|Ga0210407_10146078	All Organisms → cellular organisms → Bacteria → Acidobacteria	1821	Open in IMG/M
3300020580\|Ga0210403_10324007	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300020580\|Ga0210403_10996495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300020581\|Ga0210399_10017321	All Organisms → cellular organisms → Bacteria	5691	Open in IMG/M
3300020582\|Ga0210395_10012394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6325	Open in IMG/M
3300020582\|Ga0210395_10070447	All Organisms → cellular organisms → Bacteria	2570	Open in IMG/M
3300020582\|Ga0210395_10241123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1358	Open in IMG/M
3300021171\|Ga0210405_10876529	Not Available	683	Open in IMG/M
3300021180\|Ga0210396_10207425	All Organisms → cellular organisms → Bacteria → Acidobacteria	1749	Open in IMG/M
3300021403\|Ga0210397_10003738	All Organisms → cellular organisms → Bacteria	9386	Open in IMG/M
3300021405\|Ga0210387_10792991	Not Available	837	Open in IMG/M
3300021420\|Ga0210394_11566179	Not Available	555	Open in IMG/M
3300021433\|Ga0210391_10154534	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1806	Open in IMG/M
3300021477\|Ga0210398_10628672	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300021479\|Ga0210410_10411411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1211	Open in IMG/M
3300022557\|Ga0212123_10563167	Not Available	726	Open in IMG/M
3300022557\|Ga0212123_10572024	Not Available	719	Open in IMG/M
3300022557\|Ga0212123_10670686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	643	Open in IMG/M
3300022881\|Ga0224545_1000626	All Organisms → cellular organisms → Bacteria	7571	Open in IMG/M
3300024331\|Ga0247668_1079069	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300025419\|Ga0208036_1060502	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300025472\|Ga0208692_1067147	Not Available	786	Open in IMG/M
3300025496\|Ga0208191_1001724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10378	Open in IMG/M
3300027080\|Ga0208237_1041643	Not Available	690	Open in IMG/M
3300027370\|Ga0209010_1000258	All Organisms → cellular organisms → Bacteria	18801	Open in IMG/M
3300027497\|Ga0208199_1133303	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	506	Open in IMG/M
3300027625\|Ga0208044_1017932	All Organisms → cellular organisms → Bacteria	2568	Open in IMG/M
3300027648\|Ga0209420_1063754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1084	Open in IMG/M
3300027745\|Ga0209908_10018851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1284	Open in IMG/M
3300027825\|Ga0209039_10353312	Not Available	570	Open in IMG/M
3300027853\|Ga0209274_10085714	All Organisms → cellular organisms → Bacteria → Acidobacteria	1539	Open in IMG/M
3300027854\|Ga0209517_10623768	Not Available	567	Open in IMG/M
3300027857\|Ga0209166_10044358	All Organisms → cellular organisms → Bacteria → Acidobacteria	2627	Open in IMG/M
3300027867\|Ga0209167_10076388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1682	Open in IMG/M
3300027884\|Ga0209275_10371993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	803	Open in IMG/M
3300027889\|Ga0209380_10137732	All Organisms → cellular organisms → Bacteria → Acidobacteria	1424	Open in IMG/M
3300027889\|Ga0209380_10859547	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300027895\|Ga0209624_10000045	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	115063	Open in IMG/M
3300027898\|Ga0209067_10017774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	3672	Open in IMG/M
3300027898\|Ga0209067_10222118	All Organisms → cellular organisms → Bacteria → Acidobacteria	1021	Open in IMG/M
3300027898\|Ga0209067_10493635	Not Available	694	Open in IMG/M
3300027905\|Ga0209415_10058538	All Organisms → cellular organisms → Bacteria	4789	Open in IMG/M
3300027905\|Ga0209415_10212360	All Organisms → cellular organisms → Bacteria → Acidobacteria	1806	Open in IMG/M
3300027911\|Ga0209698_10070840	All Organisms → cellular organisms → Bacteria	2981	Open in IMG/M
3300027911\|Ga0209698_10895534	Not Available	666	Open in IMG/M
3300028047\|Ga0209526_10880759	Not Available	546	Open in IMG/M
3300028759\|Ga0302224_10163431	All Organisms → cellular organisms → Bacteria → Acidobacteria	874	Open in IMG/M
3300028800\|Ga0265338_10014989	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8564	Open in IMG/M
3300029889\|Ga0246001_1001324	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13214	Open in IMG/M
3300030659\|Ga0316363_10014146	All Organisms → cellular organisms → Bacteria	4579	Open in IMG/M
3300030706\|Ga0310039_10246966	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300031057\|Ga0170834_109882163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1431	Open in IMG/M
3300031128\|Ga0170823_15722114	All Organisms → cellular organisms → Bacteria → Acidobacteria	1313	Open in IMG/M
3300031234\|Ga0302325_11534442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	855	Open in IMG/M
3300031708\|Ga0310686_110757657	All Organisms → cellular organisms → Bacteria	5412	Open in IMG/M
3300031708\|Ga0310686_113184222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1592	Open in IMG/M
3300031715\|Ga0307476_10229945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1351	Open in IMG/M
3300031823\|Ga0307478_11331874	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	596	Open in IMG/M
3300032160\|Ga0311301_10215908	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3247	Open in IMG/M
3300032160\|Ga0311301_11008812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1099	Open in IMG/M
3300032515\|Ga0348332_12177192	Not Available	511	Open in IMG/M
3300032770\|Ga0335085_10285830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1963	Open in IMG/M
3300032805\|Ga0335078_11005430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	987	Open in IMG/M
3300032892\|Ga0335081_10395110	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300033888\|Ga0334792_010858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	3608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.32%
Host-Associated	Host-Associated	0.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.96%
Aquatic	Environmental → Aquatic	38.36%
Plants	Host-Associated → Plants	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.85%
Freshwater	Environmental → Aquatic → Freshwater	26.71%
Sediment	Environmental → Aquatic → Sediment	8.90%
Peat	Environmental → Terrestrial → Peat	3.42%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.74%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.99%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	26.71%
Loam	Environmental → Terrestrial → Soil → Loam	11.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.42%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.64%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	10.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.11%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.42%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.05%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.68%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	16.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	10.27%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.53%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.16%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.74%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.05%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.05%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.05%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.37%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.37%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.37%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.37%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.68%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.68%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.68%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.68%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001082	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025419	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)	Environmental	Open in IMG/M
3300025472	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100036914	3300000567	Peatlands Soil	LIPFFLYLVAGAVTGFHIYILLMLAALGAPVDPLELVSLVGSLCLIIAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVGWF*
JGI12664J13189_10005322	3300001082	Forest Soil	MLPFCLYFVAGLITAFHVYTLVALAAYGVPINPLEFLSLLGSLSLVTAAYISLFKPYAAARIALVACLVMWSFYAPAIVRSLHAFAK*
JGI12635J15846_100491595	3300001593	Forest Soil	MLPFCLYFVAGLITAFHVYTLVVLAAYGVPINPLEFLSLLGSLSLVTAAYISLFKPYAAARIALVACLVMWSFYAPAIVRSLHAFAK*
JGI26339J46600_100297952	3300003218	Bog Forest Soil	MIPFFLYLAAGAVTGFHVYTLLTLAVLGSPVNPLELVSLAGSLGLLVAAYLSLFKPHAAAKLALLASLTIWCFYGPAIAHTVGWF*
JGIcombinedJ51221_100261711	3300003505	Forest Soil	MIVDMLPFCLYFVAGIVTGFNVYTLALAVYGARLNPLELVSXLGSLCLLIAAYVSLSKPNAAAKLALLASLMIWC
Ga0062386_1003836731	3300004152	Bog Forest Soil	MIPFFLYLAAGVVTGYHVVALVMVLGVPVYPFEIISLLGSLGLVVAAYVSLFNPHTAARLALLAALAIWCFYGPAIVHTAGLL*
Ga0073909_104000982	3300005526	Surface Soil	MLPFLLYFVTGLVTGYHVYTLMFAAYGAPTSPLEFISLLGSFCLVIAAYLSLFKPYAASRVALLAALAIWCFYGPAIAGRVRTRR
Ga0070741_1000722519	3300005529	Surface Soil	VSSGSGSIDVIMVDMFPFFLYFAASVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPNAAAKLALIACLAIWCFYGPAIAKSVRPKLGGQSSVLQPK*
Ga0070730_100066694	3300005537	Surface Soil	MLPFAIYFIAGTVTGFHVYTLLSLAVYGAPFNPLEFVSLLGSFGLLIAAYVSLFRPNAGARIALIAALTVWCFYGPAVARILRTRHGTQTKISRGFSRPTAPGVELG*
Ga0070733_100617304	3300005541	Surface Soil	VSSGSGSVDVIMIDMFPFFLYFAASLITAFHVFTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPNAAARLALIACLAIWCFYGPAIAKSVRPKLGGQSSVLKPK*
Ga0070733_102054263	3300005541	Surface Soil	MFPFCIYFVAGVITGFHVYTLLALTVYGVPSNPLELVSLLGSLCLLIAAYVSLFKPHAAARLALIACLAMWCFYGPAIAKSVQPKPGGQSSVLWVGRWSSIRKA*
Ga0070733_103297242	3300005541	Surface Soil	MRSNRWSGAIIFHMLPFFLYFVSGLVTGFHVYTLLALAVYGVPINPLEFVSLLGSLCLLIAAYVSLFKPHAAAKLALIAALAMWSFYGPAIA
Ga0070762_107009732	3300005602	Soil	MLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAACLSLFKPYAAARLALVAALAMWCFYGPAIANRVRAHLRRPAAVSPYMLPLSDGGPVISLLDDVRF*
Ga0070763_102623692	3300005610	Soil	MLPFVLYLAAGVITGFQVYTLLMLAVVGAPLDPLEFVSLAGSLGLVIAAYYSLVKPRVAAKLALLACLAIWCFYGPGIVGVVSRLAPH*
Ga0070766_100717791	3300005921	Soil	MIVDMLPFCLYFVAGIVTGFNVYTLALAVYGARLNPLELVSFLGSLCLLIAAYVSLSKPNAAAKLALLASLMIWCFYGPAIAKSIRTKLT
Ga0070766_100869331	3300005921	Soil	MLPFLLYFVAGVITGFHIYTLLALTVYGAPFNPLELVSLLGSLGLLIAAYVSLYKPHAAARIALLAALMTWSFYGPAIAKSLRT
Ga0070766_102970112	3300005921	Soil	MLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAACLSLFKPYAAARLALVAALAMWCFYGPAIANRVRAHL
Ga0075029_1000041625	3300006052	Watersheds	MLPFVLYFTCAVVTGFHIYTLLALAVYGAPFNPLELLALLGSLALMIAAYMSLFRPYAAARVALIAALALWSFYAPAIARMVRTRIGTSTSTLSIGIYQASGIGS*
Ga0075029_1004615941	3300006052	Watersheds	MNANRKSICFAGGIIVDMFPFCLYFLASVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACLAIWCFYSPAIAKSFRSKLGGQS
Ga0075017_1001432313	3300006059	Watersheds	MNANRKSICFAGGIIVDMFPFCLYFLASVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACLAIWCFYGPAIAKSFRSKLGGQSSVLEPK*
Ga0075017_1003891702	3300006059	Watersheds	VSSGSGSIDVIMVDMFPFFLYFAASVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPNAAAKLALIACLAIWCFYGPAIAKSVRPKLGGQSSVLKPK*
Ga0075030_1000704632	3300006162	Watersheds	MNANRKSICFAGGIIVDMFPFCLYFLASVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACLAIWCFYSPAIAKSFRSKLGGQSSVLEPK*
Ga0075030_1002536803	3300006162	Watersheds	MLPFLLYFATAVVTGCHLYTLLALAVYGAPFNPLELVSIFGSLCLLIAAYVSLFKPYAAARLALVAALAIWCFYGPAIAKIVRTRLAPATAVSYEGARL*
Ga0075014_1002620362	3300006174	Watersheds	MIVEMLPFFLYFVASLITGFHVCILLALAAHGTPSNPLELVSLLGSLCLLIAAYVSLFKPHAAARLALIACLAIWCFYGPAVAKSIRPKLGVLSSVLEPR*
Ga0075014_1004666742	3300006174	Watersheds	MVDMFPFFLYFASSVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPNAAAKLALIACLAIWCFYGPAIAKSIRPKLGGQSSVLEPK*
Ga0116222_14141461	3300009521	Peatlands Soil	MTPFLLYLAAGAATGFHVYTLLMLAVVGAPVNPLELVSLLGSLCLLVAAYWSVFNPHAAARLALVAALAMWCFYGPALARAVGRL*
Ga0116222_14419301	3300009521	Peatlands Soil	MIPFFLYLAAGAATGFHVYTLLMLAVLGAPVDPLELVSLVGSLCLIVAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRAADWF*
Ga0116220_105895762	3300009525	Peatlands Soil	MIPFSLYLAAGAATGFHVYTLLTLAVLGAPVDPLELVSLVGSLCLLAAAYLSLFKPHAAARLALLASLAIWCFYGPAIARTVGWF*
Ga0116133_10243403	3300009623	Peatland	VIPFFLYLAAGVATGFHVYTLLMLAVVGAPVDLLEFVSLAGSLGLLVAAYLSLFKPNAAARLALPASLAIWCFYGPAIARTVGWF*
Ga0116112_11820591	3300009636	Peatland	MIPFFLYLAAGAVTGFHVCTLLMLAVLGSPVNPLELVSLAGSLCLLVAAYLSLFKPHAAAKLALLASLTIWCFYGPAIARTVGWF*
Ga0116110_100295210	3300009643	Peatland	LIPFFLYLVVGAVTGFHVYILLMLAALGAPVDPLELVSLVGSLCLIIAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVGWF*
Ga0116110_11064032	3300009643	Peatland	MIPFFLYLAAGAVTGFHVYTLLMLAVLGAPVSPLELVSLVGSLCLIVAAYLSLFKPHAAARLALLAALAIWCFYGPAIARTVGWF*
Ga0116215_13831292	3300009672	Peatlands Soil	MFPFLLYFITAVVTGFHIYTLLSLVVLGVPINPLEVVALLGSLCLLIAAYISLFKPHAAARLALVATLAIWSFYGP
Ga0116219_100185284	3300009824	Peatlands Soil	MTPFLLYLAAGAATGFHVYTLLMLAVVGAPVNPLELVSLLGSLCLLVAAYWSVFNPHAAARLALVAALAMWCFYGPALARAVVRL*
Ga0116223_107236462	3300009839	Peatlands Soil	MIPFFLYLAAGAATGFHVYTLLMLAVLGGPVDPLELVSLAGSLCLLVAAYLSLFKPHPAAKLALVASLAIWCFYGPAIVRTIGWFGT*
Ga0074046_100335352	3300010339	Bog Forest Soil	MIPFFLYLAAGAVTGFHVYTLLILGVLGSPVNPLELVSLAGSLGLLVAAYLSLFKPHAAAKLALLASLTIWCFYGPAIAHTVGWF*
Ga0074045_104607412	3300010341	Bog Forest Soil	MIPFFLYLAAGAVTGFQVYALLVLAVLGCPVNPLEFVSLAGSLCLIVAAYLSLFKPHAAARLAWLASLAIWCFYGPAIARTIRWF*
Ga0074044_101366333	3300010343	Bog Forest Soil	MIPFFLYLAAGVVTGYHVVALVMVLGVPVYPFEIISLLGSLGLVVAAYVSLFNPHTAARLALLAALAIWCVYGPAIVHTAGLL*
Ga0136449_1001716671	3300010379	Peatlands Soil	MKTRKKKQSSFTNMIPFFLYLAAGAVTGFHVYTLLMLAVLGVPVNPLEFVSLAGSLGLFIAAYLSLFKPNAAARLALLAALAIWCFYGPAIVRAADWF*
Ga0136449_1004838303	3300010379	Peatlands Soil	MIVEMLPFFLYFVASVITGFHVCMLLALAAHGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACLAIWCFYGPAVAKSIRPRVGVQSSARELR*
Ga0136449_1009993972	3300010379	Peatlands Soil	VLPFVLYSVTGVVTGFHLYTLLALVVYGAPFDPLELVALSGSFGLLMAAYVSLFRPHAGAKLALVAALATWCFYGPAIAKVVRTRLDRQVQSRSSPSGSPRSTTMSSQ*
Ga0136449_1010742672	3300010379	Peatlands Soil	MLPFFLYLITGVVTGFHVYALLSFSVYTGAINPLELVSLLGSFCLLIAAYLSLFRPPAAGRLALIACLLMWCFYGPAIANLVRARL*
Ga0136449_1012150582	3300010379	Peatlands Soil	MLPFFLYLVAGAVTGCHVYTLLMLAMLGAPVDPLELVSMAGSLCLLVAAYLSLFKPRAAAKLALLASLAIRCFYSPAMVHAAGWF*
Ga0136449_1040468692	3300010379	Peatlands Soil	CLYFAASVITGFHVYTLLALAVYGAPYNPQELISLLGSLCLLVAAYLSLSKPYVAARLALLACLTIWCFYGPAIAKSIRGL*
Ga0136449_1043903252	3300010379	Peatlands Soil	MFPFCLYFVTSVITGFHVYTLLALAIYGAPSNPLELVSLLGSLCLLIAAYVSLFKPNAAAKLALITCLAIWCFYGPAIAKSIRPTLGGQSSVLKLK*
Ga0137776_12664431	3300010937	Sediment	MLPFLLYFAAGAATGYHIYTLLLFAVQGAPFNPLELVALLGSLCLFVAAYLSLFRPYAAGRLALVACLAIWCFYGPAI
Ga0181521_105884691	3300014158	Bog	VIPFFLYLAAGVATGFHVYTLLMLAVVGAPVDLLEFVSLAGSLGLLVAAYLSLFKPNAAARLALPASLAIWCFYGPA
Ga0181538_102687382	3300014162	Bog	MVPFFLYLAAGAATGFHVLTLLMLAALGVPVDTLEFVSLAGSLGLFVAAYLSLFKPNAAARLALPAALAIWCFYGPAIARTIGRF*
Ga0181526_102948551	3300014200	Bog	MIPFFLYLAAGAVTGFHIYTLLMLAVLGVPADPRELISLLGSLCLIVAAYLSLFNPHAAARLALLASLAIWCFY
Ga0182018_100040286	3300014489	Palsa	MLPFFLYFVAGVITGFHVYTLLSMTRYGIAFNPLELVSLLGSLGLLIAATISLFKPYAAAKVALLACLLIWSLYGPAIANFVRTGV*
Ga0182024_1000026090	3300014501	Permafrost	MIPFVLYFAAGVMSGYHVYTLLTLAVVGAPFDPLEFVSLAGSLALIVAAYWSLFRPHAAAKLALLASLATWCFYGPAIAHSLSRL*
Ga0182024_1000244114	3300014501	Permafrost	MFPFCLYFVVSVVTGFQVYTLLVLTAYGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACLAIWCFYGPAIAKSVRPKLGE*
Ga0182024_100986623	3300014501	Permafrost	MLPFFLYLITAVLTGFHVYTLLTLTLLGAPVNPLELVSLLGSLALLIAAYISLFSPYIAARVALLACLAMWSFYAPAIAKSIRSGGGK
Ga0182024_104904481	3300014501	Permafrost	MIVDMLPFCLYFVAGIVTGFHVYTLALAMYGARLNPLELVSLLGSLCLLIAAYVSLSKPKAAAKIALLASLMIWCFYGPAIAKSVRTKLDKPSSVVFRSGSVSFARTPEGA*
Ga0181511_13859011	3300016702	Peatland	MLPFCLYFVAAMITGFNVYTLLAMTLYGVPFNPLEFVSLLGSLCLMIAAFISLFRPYVAARVALVASLLIWSFYGPA
Ga0181505_101577402	3300016750	Peatland	MVPFFLYLAAGAATGFHVLTLLMLAALGVPVDTLEFVSLAGSLGLFVAAYLSLFKPNAAARLALPAALAIWCFYGPAIARTIGRF
Ga0181505_103080581	3300016750	Peatland	MIPFFLYLAAGAVTGFHIYTLLMLAVLGVPADPRELISLLGSLCLIVAAYLSLFNPHAAARLALLASLAIWCSYSPAIVRAAGWF
Ga0187818_100003528	3300017823	Freshwater Sediment	MIPFFLYLAAGAVTGFHVYTLLMLAVLGSPVNPLELVSLAGSLCLLVAAYLSLFKPHAAAKLALLASLTIWCFYGPAIAHTVGWF
Ga0187818_100258034	3300017823	Freshwater Sediment	AGAVTGFHVYTLLRLTILGSPVNPLQLVSLAGSLCLLVAAYLSLFKPEAAAKLSLLASLTIWCFYGPAIARTIGWF
Ga0187818_101992112	3300017823	Freshwater Sediment	MIPFLLYLAAGVVTGFHVYTLLMLAVLGAPVNPLELVSLLGSLGLLVAAYWSVFNPHAAARLALVAALAMWCFYGPALAHAITRL
Ga0187820_12525162	3300017924	Freshwater Sediment	MLPFCLYLIAALITAFHVCTLIALALYGAAAVNPLELVSLLGSLVLLIAAYVSLFKPRAGARVALLACLAIWCFYGPAIVKLF
Ga0187849_10568402	3300017929	Peatland	LIPFFLYLVVGAVTGFHVYILLMLAALGAPVDPLELVSLVGSLCLIIAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVGWF
Ga0187801_102506792	3300017933	Freshwater Sediment	GMIPFFLYLAAGAVTGFHVYTLLMLAVLGSPVNPLELVSLAGSLCLLVAAYLSLFKPHAAAKLALLASLTIWCFYGPAIAHTVGWF
Ga0187801_102742011	3300017933	Freshwater Sediment	MLPFCLYFGAGVITGFHVYTLISMVVYGTPINPLEIGSLLGSLCLVIAAYVSLFKPYAAARLALLASLLIWGFYGPAIAK
Ga0187803_100231172	3300017934	Freshwater Sediment	MAPFFLYFAAGAVTGFHVYTLLRLTVLGSPVNPLELISLAGSLCLLVAAYLSLFKPDAAAKLALLAALTLWCFYGPAIARTIGWF
Ga0187848_101481382	3300017935	Peatland	VIPFFLYLAAGVATGFHVYTLLMLAVVGAPVDLLEFVSLAGSLGLLVAAYLSLFKPNAAARLALPASLAIWCFYGPAIARTVGWF
Ga0187821_104283211	3300017936	Freshwater Sediment	VLAMLPFLLYFVTGVVTGYHVYALMFAAYGAPTSPLELVSLLGSFSLVIAAYLSLFKPYAASRVALLAALAIWCFYGPAIAGRVRT
Ga0187808_103498642	3300017942	Freshwater Sediment	MAPFFLYLAAGAVTGFHVYTLLRLTVLGSPVNPLELFSLAGSLCLLVAAYLSLFKPEAAAKLALLASLTIWCFYGP
Ga0187819_100273423	3300017943	Freshwater Sediment	MAPFFVYLAAGAVTGFHVYTLLRLTALGSPVNPLELFSLAGSLCLLVAAYLSLFKPEAAAKLALLASLTIWCFYGPAIARTIGWF
Ga0187879_100119163	3300017946	Peatland	MIPFFLYLAAGAVTGFHVYTLLMLAVLGAPVSPLELVSLVGSLCLIVAAYLSLFKPHAAARLALLAALAIWCFYGPAIARTVGWF
Ga0187817_100950782	3300017955	Freshwater Sediment	MAPFFLYLAAGAVTGFHVYTLLRLTVLGSPVNPLELFSLAGSLCLLVAAYLSLFKPEAAAKLALLASLTIWCFYGPAIARTIGWF
Ga0187823_103282981	3300017993	Freshwater Sediment	MLPFLLYFVTGLVTGYHVYTLMFAAYGAPTSPLELVSLLGSFSLVIAAYLSLFKPYAASRVALLAALAIWCFYGPAIAGRCEHVGSRLR
Ga0187815_101965471	3300018001	Freshwater Sediment	MAPFFLYFAAGAVTGFHVYTLLRLTVLGSPVNPLELISLAGSLCLLVAAYLSLFKPEAAAKLALLASLTIWCFYGPAIARTIGWF
Ga0187868_13070761	3300018002	Peatland	LIPFFLYLAAGAVTGFHVYILLMLAALGAPVNPLELVSLAGSLCLIVAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVGWF
Ga0187804_105215922	3300018006	Freshwater Sediment	RWAECYRLRSKHLNMAPFFLYLAAGAVTGFHVYTLLRLTVLGSPVNPLELISLAGSLCLLVAAYLSLFKPDAAAKLALLAALTLWCFYGPAIARTIGWF
Ga0187810_100309292	3300018012	Freshwater Sediment	MIPFLLYLAAGVVTGFHVYTLLMLAVLGAPVNPLELVSLLGSLGLLVAAYWSVFNPHAAARLALVAALAMWCFYGPALAHTITRL
Ga0187866_10159995	3300018015	Peatland	LIPFFLYLVVGAVTGFHVYILLMLAALGAPVDLLEFVSLVGSLCLIIAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVGWF
Ga0187874_103860701	3300018019	Peatland	VIPFFLYVAAGVATGFHVYTLLMLAVVGAPVDLLEFVSLAGSLGLLVAAYLSLFKPNAAARLALPASLAIWCFYGPAIARTVGWF
Ga0187863_103116532	3300018034	Peatland	MLPFFLYFVAGVITGFHVYTSLSMTRYGIAFNPLELVSLLGSLGLLIAATISLFKPYAAAKVALLACLLIWSLYGPAIANFVRTGV
Ga0187863_109073761	3300018034	Peatland	VIPFFLYLAAGVATGFHVYTLLMLAVVGAPVDLLEFVSLAGSLGLLVAAYLSLFKPNAAARLALPASLAIWCFY
Ga0210407_101460782	3300020579	Soil	MLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAACLSLFKPYAAARLALVAALAMWCFYGPAIANRVRAHLRRPA
Ga0210403_103240073	3300020580	Soil	IMLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAAYLSLFKPHAAARLALVAALAMWCFYGPALANRVRAHLGRPAAVSPYMLPLSDGAPGISLLDDVRF
Ga0210403_109964952	3300020580	Soil	VASVITGFHVYTLLALAVYGAPANPLELVSLLGSLCLLVAAYVSLFKPNAAARLALIACLAIWCFYGPAIAKSVRPKLGGQSSVLQPK
Ga0210399_100173213	3300020581	Soil	MLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAACLSLFKPYAAARLALVAALAMWCFYGPAIANRVRAHLGRPAAVSPYMLPLSEGGPVISLLDDVRF
Ga0210395_100123946	3300020582	Soil	MIVDMLPFCLYFVAGIVTGFNVYTLALAVYGARLNPLELVSFLGSLCLLIAAYVSLSKPNAAAKLALLASLMIWCFYGPAIAKS
Ga0210395_100704472	3300020582	Soil	MLPFVLYLAAGVITGFQVYTLLMLAVVGAPLDPLEFVSLAGSLGLVIAAYYSLVKPRVAAKLALLACLAIWCFYGPGIVGVVSRLAPH
Ga0210395_102411233	3300020582	Soil	MLPFFLYFAASVITGFHVCMLLALAAHGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACLAIWCFYGPAVAKSIRPRVGVQSAARELR
Ga0210405_108765291	3300021171	Soil	MIVDMLPFCLYFVAGIVTGFNVYTLALAVYGARLNPLELVSFLGSLCLLIAAYVSLSKPNAAAKLALLASLMIWCFYGPAIAKSIRTKL
Ga0210396_102074252	3300021180	Soil	MLPFFLYFAASVITGFHVCMLLALAAHGAPSNPLELVSLLGSLCLLIAAYVSLFKPYTAARLALIACLAIWCFYGPAVAKSIRPRVGVQSSARELR
Ga0210397_100037388	3300021403	Soil	MLPFFLYFVASLITGFHVCMLLALSAHGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACLAIWSFYGPAVAKSIRPKLVVQSSVLEPR
Ga0210387_107929912	3300021405	Soil	MLPFVLYFVTGAATSFHVCMLLFAAYGEPVNPLELVSLLGSVCLLVAAYLSLFRAHAAARLALIACLLMWCFYAPAIANFVRARWH
Ga0210394_115661791	3300021420	Soil	MLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAACLSLFKPYAAARLALVAALAMWCFYGPAIANRVRAHLRRPAAVS
Ga0210391_101545342	3300021433	Soil	MLPFVLYLAAGVITGFQVYTLLILAVVGAPLDPLEFVSLAGSLGLVIAAYYSLVKPRVAAKLALLACLAIWCFYGPGIVGVVSRLAPH
Ga0210398_106286721	3300021477	Soil	MIFYMLPFFLYFATGLITGLNVYTLLALAAYGVPFNPLELVSLLGSLCLLIAAYVSLVKPRVAARLALLASLTIWSFYGPAIAKSIRTKADIRSSVFRD
Ga0210410_104114112	3300021479	Soil	MLPFFLYFAAGVITGFHVYTLLALTVYGAPFNSLELVSLLGSVGLLMAAFIGLFKPYAAARIAFIACLMTWSFYGPAIA
Ga0212123_105631672	3300022557	Iron-Sulfur Acid Spring	MLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAACLSLFKPYAAARLALVAALAMWCFYGPAIANRVRAHLRRPAAVSPYMLPLSDGGPVISLLDDVRF
Ga0212123_105720242	3300022557	Iron-Sulfur Acid Spring	MIFCMLPFCLYFVAGVVTGFHVCTLLALAVYGIPFNPLELTSLFGSLCLLVAAFVSLFKPYMAGRLALLACLAIWGFYGPATA
Ga0212123_106706861	3300022557	Iron-Sulfur Acid Spring	MLPFVLYFVTAVVTGFHVYTLLSFAVYGVPVNLLELLSLLGSFCLLIAAYISLFRPHAAARLALLACLVIWSFYAPAIAKIVRTR
Ga0224545_10006263	3300022881	Soil	MIPFVLYFAAGVMSGYHVYTLLTLAVVGAPFDPLEFVSLAGSLALIVAAYWSLFRPHAAAKLALLASLATWCFYGPAIAHSLSRL
Ga0247668_10790692	3300024331	Soil	MLPFFLYFVTGIVTGFHVYTLLSLSVYGAPFNPLELVSLLGSLGLVIAACLSLFRPFAAGRLALVAALAIWCFYGPAVAK
Ga0208036_10605021	3300025419	Peatland	MLPFCLYFVTGIITGFHVYTLMLLSLYGVPINPLEFVSLLGSLCLLIAAYLSLFNPRAAAKVALLASLLIWCFYAPALAKSIR
Ga0208692_10671472	3300025472	Peatland	VGAVTGFHVYILLMLAALGAPVDPLELVSLVGSLCLIIAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVGWF
Ga0208191_10017246	3300025496	Peatland	MLPFCLYFVTGIITGFHVYTLMLLSLYGVPINPLEFVSLLGSLCLLIAAYQSLFNPRAAAKVALLASLLIWCFYAPALAKSIRTRLDKHSSV
Ga0208237_10416432	3300027080	Forest Soil	MIVDMLPFCLYFVAGIVTGFNVYTLALAVYGARLNPLELVSLLGSLCLLIAAYVSLSKPNAAAKLALLASLMIWCFYGPAIAKSVRTKLTKHSSVLSDLDLFS
Ga0209010_100025811	3300027370	Forest Soil	MLPFCLYFVAGLITAFHVYTLVALAAYGVPINPLEFLSLLGSLSLVTAAYISLFKPYAAARIALVACLVMWSFYAPAIVRSLHAFAK
Ga0208199_11333032	3300027497	Peatlands Soil	MFPFLLYFITAVVTGFHIYTLLSLVVLGVPINPLEVVALLGSLCLLIAAYISLFKPHAAARLALVATLAIWSFYGPAIANAVRTRL
Ga0208044_10179322	3300027625	Peatlands Soil	MTPFLLYLAAGAATGFHVYTLLMLAVVGAPVNPLELVSLLGSLCLLVAAYWSVFNPHAAARLALVAALAMWCFYGPALARAVGRL
Ga0209420_10637541	3300027648	Forest Soil	MLPFCLYFVAGLITGFHIYTLLALAAYGVPINPLELLSFLGSLSLIIAAYISLFKPYAAARVALVACLVMWSFYAPAIVRSLHTFTK
Ga0209908_100188512	3300027745	Thawing Permafrost	MLPFFLYFVAGVITGFHVYTLLSMTRYGIAFNPLELVSLLGSLGLLIAATISLFKPYAAAKVALLACLLIWSLYGPAIANFVRTGV
Ga0209039_103533121	3300027825	Bog Forest Soil	MIPFFLYLAAGAVTGFHVYTLLTLAVLGSPVNPLELVSLAGSLGLLVAAYLSLFKPHAAAKLALLASL
Ga0209274_100857141	3300027853	Soil	MIVDMLPFCLYFVAGIVTGFNVYTLALAMYGARLNPLELVSLMGSLCLLIAAYVSLSKPSAAAKIALLASLMIWCFYGPAIAKSVRTKLAKQSSVF
Ga0209517_106237682	3300027854	Peatlands Soil	MIPFFLYLAAGAATGFHVYTLLMLAVLGGPVDPLELVSLAGSLCLLVAAYLSLFKPHPAAKLALVASLAIWCFYGPAIVRTIGWFGT
Ga0209166_100443583	3300027857	Surface Soil	MLPFAIYFIAGTVTGFHVYTLLSLAVYGAPFNPLEFVSLLGSFGLLIAAYVSLFRPNAGARIALIAALTVWCFYGPAVARILRTRHGTQTKISRGFSRPTAPGVELG
Ga0209167_100763883	3300027867	Surface Soil	MIDMFPFFLYFAASLITAFHVFTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPNAAARLALIACLAIWCFYGPAIAKSVQAKLGGQSSVLQPK
Ga0209275_103719932	3300027884	Soil	MLPFCLYFVAGLITAFHVYTLVVLAAYGVPINPLEFLSLLGSLSLVTAAYISLFKPYAAARIALVACLVMWSFYAPAIVRSLHAFAK
Ga0209380_101377322	3300027889	Soil	MLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAACLSLFKPYAAARLALVAALAMWCFYGPAIANRVRAHLGRPAAVSPYMLPLSDGGPVISLLDDVRF
Ga0209380_108595472	3300027889	Soil	MLPFVLYFVTAVVTGFHVYTLLSFAVYGVPINLLELLSLLGSFCLLIAAYVSLFRPHAAARLALLACLVMWSFYAPAIAKIVRPACPRFTSAPA
Ga0209624_1000004568	3300027895	Forest Soil	MLPFALYLAAGVITGFHVYSLLILAVVGAPLDPLEFVSLAGSLGLVIAAYYSLVKPRVAAKLALLACLAIWCFYGPGIVGVVSGFAAH
Ga0209067_100177742	3300027898	Watersheds	MLPFVLYFTCAVVTGFHIYTLLALAVYGAPFNPLELLALLGSLALMIAAYMSLFRPYAAARVALIAALALWSFYAPAIARMVRTRIGTSTSTLSIGIYQASGIGS
Ga0209067_102221181	3300027898	Watersheds	MLPFCLYFVASVITGFHVYTLLVLTVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPYTAARLALIACLAIWCFYGPAIAKSIRPKLGGQSSVLLGRPLVKHQK
Ga0209067_104936352	3300027898	Watersheds	MIVEMLPFFLYFVASLITGFHVCILLALAAHGTPSNPLELVSLLGSLCLLIAAYVSLFKPHAAARLALIACLAIWCFYGPAVAKSIRPKLGVLSSVLEPR
Ga0209415_100585383	3300027905	Peatlands Soil	LIPFFLYLVAGAVTGFHIYILLMLAALGAPVDPLELVSLVGSLCLIIAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVCWF
Ga0209415_102123603	3300027905	Peatlands Soil	MIPFFLYLAAGAATGFHVYTLLMLAVLGGPVDPLELVSLAGSLCLLVAAYLSLFKPHPAAKLALVASLAI
Ga0209698_100708404	3300027911	Watersheds	VSSGSGSIDVIMVDMFPFFLYFAASVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPNAAAKLALIACLAIWCFYGPAIAKSVRPKLGGQSSVLQPK
Ga0209698_108955341	3300027911	Watersheds	MLPFLLYFATAVVTGCHLYTLLALAVYGAPFNPLELVSIFGSLCLLIAAYVSLFKPYAAARLALVAALAIWCFYGPAIAKIVRTRLAPATAVSYEGARL
Ga0209526_108807591	3300028047	Forest Soil	MTAEKIICARRLRYSMLPFVLYFVTAVVTGFHVYMLLSFVVYGVPINPLELFALLGSFCLLIAAYLSLFRPRAAGRLALLACLAMWCFYAPA
Ga0302224_101634312	3300028759	Palsa	VIAGFVGMYGFDMLPFFLYLVAGAITGFHVYSLLALTVLGAPSHPLEFVSLLGSLGLVVAAYLSLFKPHAAARLALLASLAIWLFYGPAIARAVETRLHK
Ga0265338_100149894	3300028800	Rhizosphere	MLPFILYVVTGVVTGLHVYTLMFAGFGMPFNPLELISLLGSLCLLLAAYLSLFKPDAAARLALVAALAMWCFYGSALANRVRAHFGRTAAASQYIHALSDAAPGPLLLESVRF
Ga0246001_10013241	3300029889	Peat	MLPFCLYFVTGIITGFHVYTLMLLSLYGVPINPLEFVSLLGSLCLLIAAYLSLFNPRAAAKVALLASLLIWCFYAPALAKSIRTRLDKHSSV
Ga0316363_100141463	3300030659	Peatlands Soil	LIPFFLYLVAGAVTGFHIYILLMLAALGAPVDPLELVSLVGSLCLIIAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVGWF
Ga0310039_102469661	3300030706	Peatlands Soil	MTPFLLYLAAGAATGFHVYTLLMLAVVGAPVNPLELVSLLGSLCLLVAAYWSVFNPHAAARLALVAALAMWCF
Ga0170834_1098821632	3300031057	Forest Soil	MIVEMPPFLLYFVASVITGFHVGMLLALAAHGAPSNPLELVSLLGSLCLLIAAYVSLFKPHAAARLALIACLAIWCFYGPAVAKSIRPKLGVQSSVLEPR
Ga0170823_157221141	3300031128	Forest Soil	MIVEMLPFFLYFVASLITGFHVCMLLALAAHGAPSNPLELVSLLGSLCLLIAAYVSLFKPHAAARLALIACLAIWCFYGPAVA
Ga0302325_115344421	3300031234	Palsa	MLPFCLYFVAGLITGFHVYTLLALAAYGVPVSPLELLSFLGSLSLIIAAYISLFKPYAAARVALLACLVMWSFYAPAILRSLHR
Ga0310686_1107576573	3300031708	Soil	MIPFVLYFAGGVVSGFHVYTLLTLAVVGAPFDPLEFVSLAGSLALIVAAYWSLFNPHAAAKLALLASLATWCFYGPAISHALSRR
Ga0310686_1131842223	3300031708	Soil	MIPFVLYLAAAVITGFHVYTLLALAVVGAPYDPLELVSLAGSLALVVAAYWSLAKPHAAAKLALLACLAMWCFYSPAIARTMSQFAVR
Ga0307476_102299453	3300031715	Hardwood Forest Soil	MIPFVLYLAAGVITGFHVYTLLALAVVGAPYDPLELVSLVGSLALVVAAYWSLVKPHAAAKLALLACLAIWCFYGPAIARTVSRFAVR
Ga0307478_113318741	3300031823	Hardwood Forest Soil	MLTGFHVYTLLTLAVFGVPFNLLHLISLFGSFCLLIAAYVSLFKPRAAAKIALLACLLIWCFYAPATAAL
Ga0311301_102159081	3300032160	Peatlands Soil	MIPFFLYLAAGAVTGFHVYTLLMLAVLGVPVNPLEFVSLAGSLGLFIAAYLSLFKPNAAARLALLAALAIWCFYGPAIVRAADWF
Ga0311301_110088122	3300032160	Peatlands Soil	MIPFFLYLAAGAVTGFHVYTLLMLAVLGAPVDPLELVSLVGSLCLIVAAYLSLFKPHAAARLALLASLAIWCFYGPAIARTVGWF
Ga0311301_111408401	3300032160	Peatlands Soil	MIVEMLPFFLYFVASVITGFHVCMLLALAAHGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACL
Ga0348332_121771921	3300032515	Plant Litter	MLPFLLYFVAGVITGFHVYTLLALTVYGVPFNPLELVALLGSLCLLIAAYVSLFKPFAAARLALLACLALWCFYGPAIAKSIRTKHD
Ga0335085_102858303	3300032770	Soil	MFPFCLYFVASVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAFVSLFKPNAAAKLALIACLAIWCFYGPAIAKSIRPKLGGQSSVLELK
Ga0335078_110054301	3300032805	Soil	MLPFVLYFVTAVVTGYHVYTLLSLAVYGAPFNPLELVSIFGSFCLLIAAYLSLFRPYAAARLALIAALAIWCFYGPAIAKIVRTRLAPQTAVLSESARS
Ga0335081_103951101	3300032892	Soil	TGFHVYTLLMLAVLGAPANPLELVSLLGSLCLLVAAYWSIFNPHAAARLALVAALAMWCFYGPALAHAIGRL
Ga0334792_010858_3_245	3300033888	Soil	MLPFCLYFVASVITGFHVYALLAPAVYGAPWNPLELVSLLGSLGLLIAAYVSLFKPYAAARLALIACLAIWCFYGPAIANS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049837

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences