Metagenome / Metatranscriptome Family F049807

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F049807
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	44 residues
Representative Sequence	LLAALAAVLGDSFDAPTREAWTLAYNLVAETMLEGAAAARPIGS
Number of Associated Samples	96
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.68 %
% of genes near scaffold ends (potentially truncated)	97.95 %
% of genes from short scaffolds (< 2000 bps)	91.10 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (61.644 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (52.740 % of family members)
Environment Ontology (ENVO)	Unclassified (62.329 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (51.370 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.61% β-sheet: 0.00% Coil/Unstructured: 51.39%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF06445	GyrI-like	7.53
PF04307	YdjM	4.79
PF01061	ABC2_membrane	4.11
PF00196	GerE	3.42
PF03328	HpcH_HpaI	3.42
PF07690	MFS_1	3.42
PF13193	AMP-binding_C	3.42
PF02687	FtsX	2.74
PF13191	AAA_16	1.37
PF04675	DNA_ligase_A_N	1.37
PF00890	FAD_binding_2	1.37
PF00296	Bac_luciferase	1.37
PF12697	Abhydrolase_6	1.37
PF04149	DUF397	0.68
PF00730	HhH-GPD	0.68
PF00293	NUDIX	0.68
PF00400	WD40	0.68
PF07859	Abhydrolase_3	0.68
PF02922	CBM_48	0.68
PF01636	APH	0.68
PF00042	Globin	0.68
PF02371	Transposase_20	0.68
PF00392	GntR	0.68
PF00111	Fer2	0.68
PF07080	DUF1348	0.68
PF00005	ABC_tran	0.68
PF03069	FmdA_AmdA	0.68
PF13414	TPR_11	0.68
PF01638	HxlR	0.68
PF13460	NAD_binding_10	0.68
PF13546	DDE_5	0.68
PF04672	Methyltransf_19	0.68
PF03575	Peptidase_S51	0.68
PF03633	Glyco_hydro_65C	0.68
PF11774	Lsr2	0.68
PF12681	Glyoxalase_2	0.68
PF04679	DNA_ligase_A_C	0.68
PF11716	MDMPI_N	0.68
PF10604	Polyketide_cyc2	0.68
PF05853	BKACE	0.68
PF00561	Abhydrolase_1	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG1988	Membrane-bound metal-dependent hydrolase YbcI, DUF457 family	General function prediction only [R]	4.79
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	3.42
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	3.42
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	3.42
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.05
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.37
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.68
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.68
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.68
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	0.68
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.68
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.68
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	0.68
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.68
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.68
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.68
COG3246	Uncharacterized conserved protein, DUF849 family	Function unknown [S]	0.68
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.68
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.33 %
Unclassified	root	N/A	37.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.33 %
Unclassified	root	N/A	37.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.64 %
Unclassified	root	N/A	37.67 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.68 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.58 %
Unclassified	root	N/A	37.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.05 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.68 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.78 %
Unclassified	root	N/A	37.67 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.37 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.08 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.37 %
Fimbriimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia	0.68 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.68 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.68 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.68 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.67 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.79 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	3.42 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.37 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.37 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Fimbriimonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales	0.68 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.68 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.68 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.68 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.68 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.68 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.68 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.67 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	4.11 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	3.42 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.37 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.37 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.68 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.68 %
Fimbriimonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae	0.68 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.68 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.68 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.68 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.68 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.67 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	4.11 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	3.42 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.37 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.37 %
Fimbriimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas	0.68 %
Sphingomonas palmae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas palmae	0.68 %
Thermoactinospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermoactinospora	0.68 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.68 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.68 %
Virgisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium	0.68 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.68 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.67 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.11 %
Actinospica robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	1.37 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.37 %
unclassified Symbiodinium	no rank	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium	0.68 %
Virgisporangium aliadipatigenens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium aliadipatigenens	0.68 %
Frankia irregularis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia irregularis	0.68 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.68 %
Thermoactinospora rubra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermoactinospora → Thermoactinospora rubra	0.68 %
Streptomyces gardneri	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces gardneri	0.68 %
Fimbriimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas	0.68 %
Sphingomonas palmae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas palmae	0.68 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.68 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.67 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.11 %
Actinospica robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	1.37 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.37 %
Symbiodinium sp. KB8	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	0.68 %
Streptomyces sp. NBS 14/10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NBS 14/10	0.68 %
Virgisporangium aliadipatigenens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium aliadipatigenens	0.68 %
Frankia irregularis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia irregularis	0.68 %
Thermoactinospora rubra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermoactinospora → Thermoactinospora rubra	0.68 %
Streptomyces gardneri	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces gardneri	0.68 %
Fimbriimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas	0.68 %
Sphingomonas palmae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas palmae	0.68 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.68 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100748553	Not Available	1195	Open in IMG/M
3300001356\|JGI12269J14319_10027543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3863	Open in IMG/M
3300005332\|Ga0066388_102780837	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300005363\|Ga0008090_15091297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M
3300005363\|Ga0008090_15621952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	711	Open in IMG/M
3300005436\|Ga0070713_100084703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2713	Open in IMG/M
3300005436\|Ga0070713_101430698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	671	Open in IMG/M
3300005467\|Ga0070706_100504984	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300005467\|Ga0070706_101180248	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005764\|Ga0066903_100838821	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300005764\|Ga0066903_108890956	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300006175\|Ga0070712_100821530	Not Available	798	Open in IMG/M
3300009792\|Ga0126374_11881833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300010046\|Ga0126384_11469108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	638	Open in IMG/M
3300010048\|Ga0126373_10011325	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7230	Open in IMG/M
3300010048\|Ga0126373_11617190	All Organisms → cellular organisms → Bacteria → Terrabacteria group	712	Open in IMG/M
3300010048\|Ga0126373_12030611	Not Available	637	Open in IMG/M
3300010048\|Ga0126373_12182631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300010358\|Ga0126370_10286236	Not Available	1299	Open in IMG/M
3300010358\|Ga0126370_11857652	Not Available	585	Open in IMG/M
3300010359\|Ga0126376_11026075	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300010359\|Ga0126376_11735713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	660	Open in IMG/M
3300010361\|Ga0126378_11141383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	879	Open in IMG/M
3300010361\|Ga0126378_11697962	Not Available	717	Open in IMG/M
3300010361\|Ga0126378_12688570	Not Available	568	Open in IMG/M
3300010362\|Ga0126377_11146577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	847	Open in IMG/M
3300010366\|Ga0126379_10161191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2106	Open in IMG/M
3300010376\|Ga0126381_104954065	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300010398\|Ga0126383_10458593	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	1325	Open in IMG/M
3300011270\|Ga0137391_10862794	Not Available	743	Open in IMG/M
3300011271\|Ga0137393_11418436	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300012096\|Ga0137389_11790887	Not Available	510	Open in IMG/M
3300012206\|Ga0137380_11017327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	708	Open in IMG/M
3300012210\|Ga0137378_10759787	Not Available	881	Open in IMG/M
3300012351\|Ga0137386_10233222	Not Available	1323	Open in IMG/M
3300012354\|Ga0137366_10615293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia irregularis	778	Open in IMG/M
3300012357\|Ga0137384_11329653	Not Available	566	Open in IMG/M
3300012971\|Ga0126369_10509746	Not Available	1262	Open in IMG/M
3300012971\|Ga0126369_11233038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838	Open in IMG/M
3300016270\|Ga0182036_11094673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas	660	Open in IMG/M
3300016270\|Ga0182036_11296878	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300016319\|Ga0182033_10131731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1899	Open in IMG/M
3300016341\|Ga0182035_10513503	Not Available	1025	Open in IMG/M
3300016341\|Ga0182035_11325776	Not Available	645	Open in IMG/M
3300016371\|Ga0182034_10946690	Not Available	742	Open in IMG/M
3300016445\|Ga0182038_12089602	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300020582\|Ga0210395_11141145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300021407\|Ga0210383_10400605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces gardneri	1184	Open in IMG/M
3300021420\|Ga0210394_10097064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2550	Open in IMG/M
3300021478\|Ga0210402_10542413	Not Available	1079	Open in IMG/M
3300025898\|Ga0207692_10161380	Not Available	1292	Open in IMG/M
3300025905\|Ga0207685_10788569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas palmae	523	Open in IMG/M
3300025910\|Ga0207684_10928727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	730	Open in IMG/M
3300025922\|Ga0207646_11282336	Not Available	640	Open in IMG/M
3300025928\|Ga0207700_11193864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium aliadipatigenens	679	Open in IMG/M
3300027570\|Ga0208043_1188540	Not Available	525	Open in IMG/M
3300027905\|Ga0209415_10650115	Not Available	768	Open in IMG/M
3300027986\|Ga0209168_10623843	Not Available	515	Open in IMG/M
3300030494\|Ga0310037_10006342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5823	Open in IMG/M
3300031090\|Ga0265760_10160865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	741	Open in IMG/M
3300031543\|Ga0318516_10049034	Not Available	2292	Open in IMG/M
3300031543\|Ga0318516_10315384	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300031543\|Ga0318516_10548699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	662	Open in IMG/M
3300031544\|Ga0318534_10204192	Not Available	1140	Open in IMG/M
3300031544\|Ga0318534_10453150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735	Open in IMG/M
3300031544\|Ga0318534_10511102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	686	Open in IMG/M
3300031545\|Ga0318541_10353845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	820	Open in IMG/M
3300031546\|Ga0318538_10614939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300031561\|Ga0318528_10719585	Not Available	534	Open in IMG/M
3300031561\|Ga0318528_10732857	Not Available	529	Open in IMG/M
3300031564\|Ga0318573_10179087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1119	Open in IMG/M
3300031564\|Ga0318573_10432408	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300031572\|Ga0318515_10052808	Not Available	2049	Open in IMG/M
3300031572\|Ga0318515_10277971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermoactinospora → Thermoactinospora rubra	898	Open in IMG/M
3300031640\|Ga0318555_10619409	Not Available	586	Open in IMG/M
3300031679\|Ga0318561_10261365	Not Available	944	Open in IMG/M
3300031679\|Ga0318561_10269694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	929	Open in IMG/M
3300031680\|Ga0318574_10136148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1387	Open in IMG/M
3300031708\|Ga0310686_109757673	Not Available	531	Open in IMG/M
3300031713\|Ga0318496_10532607	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300031718\|Ga0307474_10700716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NBS 14/10	800	Open in IMG/M
3300031723\|Ga0318493_10133236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1274	Open in IMG/M
3300031723\|Ga0318493_10258838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	931	Open in IMG/M
3300031723\|Ga0318493_10339885	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300031724\|Ga0318500_10320788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300031724\|Ga0318500_10470161	Not Available	630	Open in IMG/M
3300031736\|Ga0318501_10010590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3550	Open in IMG/M
3300031736\|Ga0318501_10086796	Not Available	1540	Open in IMG/M
3300031744\|Ga0306918_10635451	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300031744\|Ga0306918_10813541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	729	Open in IMG/M
3300031744\|Ga0306918_11442262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300031751\|Ga0318494_10129388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1411	Open in IMG/M
3300031751\|Ga0318494_10400825	Not Available	796	Open in IMG/M
3300031751\|Ga0318494_10726477	All Organisms → cellular organisms → Bacteria → Terrabacteria group	581	Open in IMG/M
3300031751\|Ga0318494_10786944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300031765\|Ga0318554_10528323	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300031768\|Ga0318509_10100699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1557	Open in IMG/M
3300031792\|Ga0318529_10031673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2196	Open in IMG/M
3300031793\|Ga0318548_10229539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	912	Open in IMG/M
3300031799\|Ga0318565_10092932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1442	Open in IMG/M
3300031799\|Ga0318565_10171221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1055	Open in IMG/M
3300031799\|Ga0318565_10335831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300031805\|Ga0318497_10110348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1483	Open in IMG/M
3300031819\|Ga0318568_10052853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2349	Open in IMG/M
3300031821\|Ga0318567_10426333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	752	Open in IMG/M
3300031832\|Ga0318499_10117461	Not Available	1034	Open in IMG/M
3300031832\|Ga0318499_10310092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	609	Open in IMG/M
3300031832\|Ga0318499_10371759	Not Available	548	Open in IMG/M
3300031846\|Ga0318512_10123494	Not Available	1233	Open in IMG/M
3300031846\|Ga0318512_10565952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300031859\|Ga0318527_10011816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2918	Open in IMG/M
3300031860\|Ga0318495_10187669	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300031860\|Ga0318495_10279247	Not Available	745	Open in IMG/M
3300031890\|Ga0306925_11868870	Not Available	572	Open in IMG/M
3300031894\|Ga0318522_10381494	Not Available	534	Open in IMG/M
3300031896\|Ga0318551_10223075	Not Available	1048	Open in IMG/M
3300031910\|Ga0306923_11637368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668	Open in IMG/M
3300031910\|Ga0306923_11865377	Not Available	615	Open in IMG/M
3300031910\|Ga0306923_12345437	Not Available	531	Open in IMG/M
3300031942\|Ga0310916_11235840	Not Available	617	Open in IMG/M
3300031942\|Ga0310916_11407060	Not Available	571	Open in IMG/M
3300031946\|Ga0310910_10404585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1081	Open in IMG/M
3300031946\|Ga0310910_10786198	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300031954\|Ga0306926_11678755	Not Available	726	Open in IMG/M
3300031954\|Ga0306926_12557711	Not Available	558	Open in IMG/M
3300032008\|Ga0318562_10103206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	1620	Open in IMG/M
3300032008\|Ga0318562_10461912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	737	Open in IMG/M
3300032008\|Ga0318562_10793786	Not Available	542	Open in IMG/M
3300032009\|Ga0318563_10005232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5802	Open in IMG/M
3300032009\|Ga0318563_10757071	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300032010\|Ga0318569_10565798	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300032025\|Ga0318507_10105217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1180	Open in IMG/M
3300032025\|Ga0318507_10344700	Not Available	649	Open in IMG/M
3300032035\|Ga0310911_10096756	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300032043\|Ga0318556_10122834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1328	Open in IMG/M
3300032044\|Ga0318558_10231215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	907	Open in IMG/M
3300032044\|Ga0318558_10255561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	863	Open in IMG/M
3300032063\|Ga0318504_10228767	Not Available	872	Open in IMG/M
3300032063\|Ga0318504_10649190	Not Available	507	Open in IMG/M
3300032067\|Ga0318524_10726689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	524	Open in IMG/M
3300032068\|Ga0318553_10220981	Not Available	988	Open in IMG/M
3300032090\|Ga0318518_10316073	Not Available	801	Open in IMG/M
3300032090\|Ga0318518_10603639	Not Available	560	Open in IMG/M
3300032261\|Ga0306920_100546395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	1717	Open in IMG/M
3300032261\|Ga0306920_101027767	Not Available	1199	Open in IMG/M
3300033289\|Ga0310914_10944068	Not Available	762	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.10%
Loam	Environmental → Terrestrial → Soil → Loam	8.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.05%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.37%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	52.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.48%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.37%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.37%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1007485531	3300000364	Soil	DAFDAATREAWVVGYNLVAETMLEGAASVRRAKS*
JGI12269J14319_100275435	3300001356	Peatlands Soil	AMLGDGFDAPTREAWVSAYNLVAETMLEGAASARPIGA*
Ga0066388_1027808371	3300005332	Tropical Forest Soil	LAAILGDSFDAPTREAWAIAYNLVAETMLEGAASARPIRSP*
Ga0008090_150912972	3300005363	Tropical Rainforest Soil	LAALAAVLGDSFDAPTREAWDIAYNLVAETMLEGAASARPIGNRQTRAASS*
Ga0008090_156219522	3300005363	Tropical Rainforest Soil	LAALAAILGDSFDAPTREAWTLAYNLVAETMLEGAAAARPIGT*
Ga0070713_1000847035	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RATDYQTVGDALIAAIAAVLGDECDAPTREAWVLAFNIVAETMLEGAAAARPIGS*
Ga0070713_1014306982	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AADYRTVGDALLAALAAVLGDSFDTPTREAWDIAYNLMAETMLEGAALARPIGSR*
Ga0070706_1005049841	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ALAAVLGDGFDGPTRQAWALAYNLMAETMLEGAASARPIGS*
Ga0070706_1011802481	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ALAAVLGDSFDAPTRQAWTLAYNLVAETMLEGAASARPIGS*
Ga0066903_1008388213	3300005764	Tropical Forest Soil	GDSFDAPTREAWTLAYNLVAETMLEGAAAARPIGT*
Ga0066903_1088909562	3300005764	Tropical Forest Soil	AVLGDEFDAPMREAWVLAFNIVAETMLEGAAAARPIGS*
Ga0070712_1008215303	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DALLAALAAVLGDRFDAPTREAWALAYNLVAETMLEGAAAARPISS*
Ga0126374_118818331	3300009792	Tropical Forest Soil	TVGAALLAALSATLGDSFDPPTRQAWEVAYNLVAETMLEGAAAARPIGT*
Ga0126384_114691081	3300010046	Tropical Forest Soil	LLAALAAVLGDSFDAPTREAWTLAYNLVAETMLEGAAAARPIGT*
Ga0126373_100113256	3300010048	Tropical Forest Soil	MAAIAAVLGDGFVETSREAWSIAGNFVAETMLEGAASVRLIGS*
Ga0126373_116171902	3300010048	Tropical Forest Soil	ALEAVLGEDMDDQTRQAWARAYNLVSEIMLEGAAAARPIGS*
Ga0126373_120306111	3300010048	Tropical Forest Soil	LGDSFDPPTREAWTLAYNLVAETMLEGAAAARPIGS*
Ga0126373_121826312	3300010048	Tropical Forest Soil	LLAALAAVLGDRFDAPTREAWSLAYNLVAETMLEGAASARPISS*
Ga0126370_102862362	3300010358	Tropical Forest Soil	AVLDDSFDPPTREAWALAYNLVAETMLEGAAAARPIGS*
Ga0126370_118576522	3300010358	Tropical Forest Soil	LGDDFDEPTREAWTIAYNLVAETMLEGAASVRLIGS*
Ga0126376_110260752	3300010359	Tropical Forest Soil	AAVIGDSFDGPTREAWAIAYNLIAETMLDGAAAARPIGG*
Ga0126376_117357131	3300010359	Tropical Forest Soil	LLAVLAAVLGDSFDAPTREAWALAYNLVAETMLEGAAAARPIGT*
Ga0126378_111413833	3300010361	Tropical Forest Soil	DEFDAPMREAWVLAFNIVAETMLEGAAAARPIGS*
Ga0126378_116979622	3300010361	Tropical Forest Soil	VGEALLGALATVLGDDFDSPTREAWALAYNLVAETMLDGAASARPVGSHE*
Ga0126378_126885702	3300010361	Tropical Forest Soil	ALLEALAAILGDRFDAETRGAWTLAYSLIAETMLQGAASTRHPI*
Ga0126377_111465771	3300010362	Tropical Forest Soil	ALLAALAAVLGDSFDPPTREAWTLAYNLVAETMLEGAAAARPIGS*
Ga0126379_101611914	3300010366	Tropical Forest Soil	YQTVGDSLIAAIAAVLGDEFDAATREAWVLAFNIVAETMLEGAAEARPIGS*
Ga0126381_1049540652	3300010376	Tropical Forest Soil	GDSFDAPTREAWTLAYNLVAETMLEGAAAARPISS*
Ga0126383_104585934	3300010398	Tropical Forest Soil	FDDQTRRAWELAYNLVAETMLEGAASARPIGSGPRS*
Ga0137391_108627942	3300011270	Vadose Zone Soil	AALIAALAAVLGDSFDDPTRLAWTLAYNLVAETMLEGAAAARPVGS*
Ga0137393_114184361	3300011271	Vadose Zone Soil	LLDALAAVLGASFDDQTRLAWALAYNLVAETMLEGAAPARPIGS*
Ga0137389_117908872	3300012096	Vadose Zone Soil	VGDALLDALSAVLGDEFDAATREAWAIAYNLVAETMLEGAASARPVRT*
Ga0137380_110173271	3300012206	Vadose Zone Soil	ALAAVLGDSFDAATREAWVIAYNLVAETMLEGAASARPIGT*
Ga0137378_107597871	3300012210	Vadose Zone Soil	LLAALAAVLGDRFDARTREAWALAYNLVAETMLEGAAAARPISS*
Ga0137386_102332222	3300012351	Vadose Zone Soil	GDSFDAPTREAWTLAYNLVAETMLEGATAARPISS*
Ga0137366_106152931	3300012354	Vadose Zone Soil	ALTAVLGDSFDAPTREAWTLAYNLVAETMLEGAAAARPIGS*
Ga0137384_113296531	3300012357	Vadose Zone Soil	LLAALAAVLGDSFDAPTREAWTLAYNLVAETMLEGAAAARPIGS*
Ga0126369_105097461	3300012971	Tropical Forest Soil	IAAVLGDEFDAPMREAWVLAFNIVAETMLEGAAAARPIGS*
Ga0126369_112330381	3300012971	Tropical Forest Soil	IAAIAAVLGEEFDAPTREAWVLAFNIVAETMLEGAAAARPIGS*
Ga0182036_110946731	3300016270	Soil	TVGDSLIAALAGTLGEEFDAATREAWELAFNIVAETMLEGAAAARPIGS
Ga0182036_112968782	3300016270	Soil	YGVRVADYRTVGDALFAALAAVLGDSFDTQTREAWILAYNLVAETMLEGAAAARPVSS
Ga0182033_101317311	3300016319	Soil	AELGDSFDAPTREAWALAYNLVAETMLEGAAAARPIGS
Ga0182035_105135031	3300016341	Soil	QTLGDALLAALAAVLGASFDAATREAWGLAYNLVAETMLEGAAAARPISS
Ga0182035_113257762	3300016341	Soil	GEEFDAATREAWVLAFNIVAETMLEGAAAARPIGS
Ga0182034_109466901	3300016371	Soil	GDSLIAALAAVLGEEFDAQTHEAWVLAYTLVAETMLEGAAAARPIGS
Ga0182038_120896021	3300016445	Soil	RAMDYQTVGDALIAAIAAVLGDEFDAATREAWVLAFNIVAETMLEGAAAARPIGS
Ga0210395_111411451	3300020582	Soil	VLGDSFDAPTREAWDIAYNLVAETMLEGAASARPIGNR
Ga0210383_104006052	3300021407	Soil	LLAALAAVLGDSFDAPTREAWALAYNLVAETMLDGAAAAWPISS
Ga0210394_100970641	3300021420	Soil	RTVGDALLAALAVVLGDSFDAPTREAWDIAYNLVAETMLEGAAAARPIGNR
Ga0210402_105424132	3300021478	Soil	VRATDYQTVGDALIAAIAVLGDEFDAPTREAWVLAFNIVAETMLEGAAAARPIGS
Ga0207692_101613801	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LGDEFDAPTREAWVLAFNIVAETMLDGAAAARPIGS
Ga0207685_107885691	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	DYQTVGEALIAAIAGVLGDEFDAPTREAWVLAFNIVAETMLEGAAAARPIGS
Ga0207684_109287272	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TVGDALLAALAVVLGDSFDAPTREAWDIAYNLVAETMLEGAAAARPIGNR
Ga0207646_112823361	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AVLGPGFDDQTRQAWELAYNLVAETMLEGAASAHPIGS
Ga0207700_111938641	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AAIAAVLGDECDAPTREAWVLAFNIVAETMLEGAAAARPIGS
Ga0208043_11885402	3300027570	Peatlands Soil	ADYQTVRDALLAALAAMLGDGFDAPTREAWVSAYNLVAETMLEGAASARPIGA
Ga0209415_106501152	3300027905	Peatlands Soil	LGALAASLGDSFDAPTREAWVAAYNLVAESMLEGAASARPIGA
Ga0209168_106238431	3300027986	Surface Soil	YGVRVADYQTVGDALVAALAAILSDSFDAQTREAWYIAYNLVAETMLDGAASARPIRT
Ga0310037_100063427	3300030494	Peatlands Soil	DYQTVCDALLAALAAMLGDGFDAPTREAWVSAYNLVAETMLEGAASARPIGA
Ga0265760_101608651	3300031090	Soil	GTAILAALAAILGSSFDAPTRQAWTLAYNLVAETMLEGAAAARTVGT
Ga0318516_100490342	3300031543	Soil	AVLGDSFDAPTREAWSTAYNLVAETMLEGAASARPIGSSSPHSG
Ga0318516_103153841	3300031543	Soil	DSLFAALAGVLGEDFDAPTREAWILAFNIVAETMLEGAAAARPIGS
Ga0318516_105486991	3300031543	Soil	TIGDSLIAALAAVLGEKFDAETHEAWILAYNIVAETMLEGAAEARPIGS
Ga0318534_102041921	3300031544	Soil	LAAVLGDSFDAATREAWGLAYNLVAETMLEGAAAARPISS
Ga0318534_104531503	3300031544	Soil	VLGDSFDARTREAWALAYNLVAETMLEGAAAARPISG
Ga0318534_105111022	3300031544	Soil	LLAALAAVLGDSFDASTREAWALAYNLVAETMLEGAAAARPVGS
Ga0318541_103538452	3300031545	Soil	AVLGDGFDAETREAWHMAYNLMAVTMLEGAASARPIGS
Ga0318538_106149391	3300031546	Soil	YQTVGEALVAALAAVLGDSFDSQTREAWHIAYNLMAETMLEGAASARPIRG
Ga0318528_107195851	3300031561	Soil	VRVADYWTVQQALLDALAVVLGDQFDAPARDAWTVAYNLVAETMLEGAASARPIGS
Ga0318528_107328571	3300031561	Soil	TVGDALLAALAAVLGDSFDAPTREAWDIAYNLMAETMLEGAASARPLGSR
Ga0318573_101790872	3300031564	Soil	LAGTLGEEFDAATREAWELAFNIVAETMLEGAAAARPIGS
Ga0318573_104324082	3300031564	Soil	YRTVGDSLLGALAAVLGDSFDAPTRDAWVIAYNLMAETMLEGAASARPIGS
Ga0318515_100528083	3300031572	Soil	AVLGDSFDAPTREAWSTAYNLVAETMLEGAASARPIGSSSPHPG
Ga0318515_102779711	3300031572	Soil	LGDSFDAPTREAWDIAYNLMAETMLEGAASARPLGSR
Ga0318555_106194091	3300031640	Soil	GERFDAQTREAWVLAYNIVAETMLEGAAAARPIGS
Ga0318561_102613652	3300031679	Soil	DSLIAALAGTLGEEFDAATREAWELAFNIVAETMLEGAAAARPIGS
Ga0318561_102696941	3300031679	Soil	YRTVGDALFAALAAVLGDSFDTPTREAWILAYNLVAETMLEGAAAARPVSS
Ga0318574_101361482	3300031680	Soil	LGDSFAPPTREAWTLAYNLVAETMLEGAAAARPIGS
Ga0310686_1097576731	3300031708	Soil	AVLGDSFDAATREAWALAYNLVAETMLEGAASARPIGS
Ga0318496_105326072	3300031713	Soil	AILGDSFDAPTREAWTLAYNLVAETMLEGAAAARPIGT
Ga0307474_107007161	3300031718	Hardwood Forest Soil	MLLAALAAVLGDRFDAATREAWALAYNLVAETMLEGAASARPIGS
Ga0318493_101332361	3300031723	Soil	LAALAAELGDSFDAPTREAWALAYNLVAETMLEGAAAARPIGS
Ga0318493_102588381	3300031723	Soil	YQTLGTALLAALAAILGDSFAPPTREAWTLAYNLVAETMLEGAAAARPIGS
Ga0318493_103398852	3300031723	Soil	LIAALAGVLGEEFDDATREAWVLAFNIVAETMLEGAAAARPIGS
Ga0318500_103207882	3300031724	Soil	RTVGDALFAALAAVLGGSFDTQTREAWILAYNLVAETMLEGAAAARPVSS
Ga0318500_104701611	3300031724	Soil	ALLAALAAVLGDSFDTPTREAWVLAYNLVAETMLEGAAAVRPVGS
Ga0318501_100105901	3300031736	Soil	ADYQTVGDSLIAALAGLLGEEFDAPTREAWILAFNIVAETMLEGAAAARPIGS
Ga0318501_100867962	3300031736	Soil	LGDSFDAPTREAWSTAYNLVAETMLEGAASARPIGSSSPHSG
Ga0306918_106354511	3300031744	Soil	ADYQTVGDSLIAALAGTLGEEFDAPTREAWILAFNIVAETMLEGAAAARPIGS
Ga0306918_108135411	3300031744	Soil	VGDSLIAALAGTLGEEFDTATREAWELAFNIVAETMLEGAAAARPIGS
Ga0306918_114422622	3300031744	Soil	ALLAALAAVLGDSFDARTREAWALAYNLVAETMLEGAAAARPISS
Ga0318494_101293883	3300031751	Soil	VGDSLIAALAGLLGEEFDAPTREAWILAFNIVAETMLEGAAAARPIGS
Ga0318494_104008252	3300031751	Soil	LAVVLGRSFDAPTRQAWELAYNLVAETMLEGAASARPIGS
Ga0318494_107264771	3300031751	Soil	LAAILGDSFDAPTREAWTLAYNLVAETMLEGAAAARPIGT
Ga0318494_107869441	3300031751	Soil	EALLAALAAVLGDSFDPQTHEAWHIAYNLMAETMLEGAASARPLRS
Ga0318554_105283231	3300031765	Soil	VLGEEFDDATREAWVLAFNIVAETMLEGAAAARPIGS
Ga0318509_101006991	3300031768	Soil	DSLIAALAGTLGEEFDTATREAWELAFNIVAETMLEGAAAARPIGS
Ga0318529_100316731	3300031792	Soil	AGILGEEFDAPTREAWILAFNIVAETMLEGAAAARPIGS
Ga0318548_102295392	3300031793	Soil	LLGALAAVLGDSFDAPTRDAWVIAYNLMAETMLEGAASARPIGS
Ga0318565_100929323	3300031799	Soil	SLIAALAGTLGEEFDTATREAWELAFNIVAETMLEGAAAARPIGS
Ga0318565_101712211	3300031799	Soil	LGDSFDARTREAWALAYNLVAETMLEGAAAARPISS
Ga0318565_103358312	3300031799	Soil	EALLAALAAVLGDSFDAQTREAWYIAYNLMAETMLEGAASARPLRS
Ga0318497_101103481	3300031805	Soil	DYQTLGNALLAALAAVLGDSFDTPTREAWVLAYNLVAETMLEGAAAVRPVGS
Ga0318568_100528531	3300031819	Soil	ELGDSFDAPTREAWALAYNLVAETMLEGAAAARPIGS
Ga0318567_104263333	3300031821	Soil	ALLGALAAVLGDNFDAPTRDAWVIAYNLMAETMLEGAASARPIGS
Ga0318499_101174612	3300031832	Soil	LGDSFDAATREAWGLAYNLVAETMLEGAAAARPISS
Ga0318499_103100922	3300031832	Soil	FAALAAALGDRFDAQTSEAWHIAYNLMAETMLEGAASARPIRG
Ga0318499_103717592	3300031832	Soil	QTVGDSLFAALAGVLGEDFDAPTREAWILAFNIVAETMLEGAAAARPIGS
Ga0318512_101234942	3300031846	Soil	AALAAILGDSFDAPTREAWALAYNLVAETMLEGAAAARPISS
Ga0318512_105659521	3300031846	Soil	YRTVGDALFAALAAVLGDSFDTQTREAWILAYNLVAETMLEGAAAARPVSS
Ga0318527_100118165	3300031859	Soil	QTVGEALFAALAAVLGDDFDAETREAWHMAYNLMAVTMLEGAASARPIGS
Ga0318495_101876691	3300031860	Soil	LFAALAGVLGEDFDAPTREAWILAFNIVAETMLEGAAAARPIGS
Ga0318495_102792472	3300031860	Soil	GDSLIAAIAAVLGEEFDAATREAWVLAFNIVAETMLEGAAAARPIGS
Ga0306925_118688702	3300031890	Soil	LAAILGDDFDAPTREAWALAYNLVAETMLEGAAAARPISS
Ga0318522_103814941	3300031894	Soil	SLATASTPPTREAWALAHKPCADTMLEGAASARPIGS
Ga0318551_102230752	3300031896	Soil	LLAALAAVLGDSFDAATREAWGLAYNLVAETMLEGAAAARPISS
Ga0306923_116373681	3300031910	Soil	ALLAALAAVLGDSFDPQTHEAWHIAYNLMAETMLEGAASARPLRS
Ga0306923_118653772	3300031910	Soil	ATVLGDSFDAPTREAWVIAYNLMAETMLDGAGSARLIGS
Ga0306923_123454371	3300031910	Soil	SVLGDEFDPETREAWELAFNIVAETMLEGAAAARPIGSSPRCPAG
Ga0310916_112358402	3300031942	Soil	YQTVGDSLIAAIAAVLGEEFDAATREAWVLAFNIVAETMLEGAAAARPIGS
Ga0310916_114070602	3300031942	Soil	LGNALLAALAAVLGDSFDAATREAWGLAYNLVAETMLEGAAAARPISS
Ga0310910_104045851	3300031946	Soil	ALAGLLGEEFDAPTREAWILAFNIVAETMLEGAAAARPIGS
Ga0310910_107861981	3300031946	Soil	AAVLGGEFDAATREAWILAFNIVAETMLEGAAAARPIGS
Ga0306926_116787551	3300031954	Soil	VLGDSFDTQTCEAWHIAYNLVAETMLEGAASARPIST
Ga0306926_125577111	3300031954	Soil	AALAAVLGDSFDTPTREAWVLAYNLVAETMLEGAAAARPVGS
Ga0318562_101032061	3300032008	Soil	LAALAAILGDSFDAPTREAWTLAYNLVAETMLEGAAAARPIGT
Ga0318562_104619122	3300032008	Soil	NALLAALAAVLGDGFDASTREAWTLAYNLVAETMLEGAATVRPVGS
Ga0318562_107937862	3300032008	Soil	AILGDSFDAATREAWALAYNLVAETMLEGAAAARPISS
Ga0318563_100052328	3300032009	Soil	IGDALIAALAAVLGERFDAQTREAWVLAYNIVAETMLEGAAAARPIGS
Ga0318563_107570711	3300032009	Soil	GDALLGALAAVLGDNFDAPTRDAWVIAYNLMAETMLEGAASARPIGS
Ga0318569_105657981	3300032010	Soil	VRVADYRTVGDALFAALAAVLGDSFDTQTREAWILAYNLVAETMLEGAAAARPVSS
Ga0318507_101052171	3300032025	Soil	YQTVGDSLIAALAGTLGEEFDTATREAWELAFNIVAETMLEGAAAARPIGS
Ga0318507_103447001	3300032025	Soil	ATDYQTVGDSLIAAIAAVLGGEFDAATREAWILAFNIVAETMLEGAAAARPIGS
Ga0310911_100967561	3300032035	Soil	LGNVLLVALAAVLGDSFDAPTREAWTLAYNLVAETMLEGAAAARPIGS
Ga0318556_101228343	3300032043	Soil	LAAVLGDSFDTPTREAWILAYNLVAETMLEGAAAARPVSS
Ga0318558_102312152	3300032044	Soil	LGHALLAALAAVLGDSFDTPTREAWVLAYNLVAETMLEGAAAARPVGS
Ga0318558_102555612	3300032044	Soil	GDSFDAQTREAWDIAYNLVAETMLEGAASARPVRG
Ga0318504_102287672	3300032063	Soil	EALLAALAAVLGDSFDAATREAWGLAYNLVAETMLEGAAAARPISS
Ga0318504_106491902	3300032063	Soil	DYQTVGDSLIAALAGTLGEEFDTATREAWELAFNIVAETMLEGAAAARPIGS
Ga0318524_107266892	3300032067	Soil	VGDSLIAAIAAVLGDEFDAETREAWLLAFNIVAETMLEGAAEARPIGS
Ga0318553_102209812	3300032068	Soil	AVLGASFDAATREAWGLAYNLVAETMLEGAAAARPISS
Ga0318518_103160732	3300032090	Soil	LAALAAILGDSFDAPTREAWALAYNLVAETMLEGAAAARPISS
Ga0318518_106036392	3300032090	Soil	QTLGNALLAALAAILGDSFDAPTREAWTLAYNLVAETMLEGAAAARPIGT
Ga0306920_1005463953	3300032261	Soil	ILGDSFDAPTREAWTLAYNLVAETMLEGAAAARPIGT
Ga0306920_1010277673	3300032261	Soil	DYQTVGEALFAALAAVLGDSFDTQTCEAWHIAYNLVAETMLEGAASARPIST
Ga0310914_109440682	3300033289	Soil	GNALLAALAAILGDSFDAPTREAWTLAYNLVAETMLEGAAAARPIGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049807

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences