Metagenome / Metatranscriptome Family F049252

Basic Information
Family ID	F049252
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	107 residues
Representative Sequence	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKGSVESQAGRLTRAVRAGMQAGSRAYRGGTRD
Number of Associated Samples	114
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.98 %
% of genes near scaffold ends (potentially truncated)	36.05 %
% of genes from short scaffolds (< 2000 bps)	65.31 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (52.381 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (20.408 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.497 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 77.19% β-sheet: 0.00% Coil/Unstructured: 22.81%
Feature Viewer

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Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF01694	Rhomboid	27.21
PF01368	DHH	12.24
PF02272	DHHA1	5.44
PF06305	LapA_dom	3.40
PF01557	FAA_hydrolase	2.04
PF08241	Methyltransf_11	1.36
PF01676	Metalloenzyme	1.36
PF13180	PDZ_2	0.68
PF12974	Phosphonate-bd	0.68
PF10143	PhosphMutase	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	27.21
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	3.40

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	14.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	14.29 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	4.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	14.29 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.76 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.68 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.76 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.04 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.68 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.76 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.04 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.68 %
Klebsiella/Raoultella group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.76 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.04 %
Klebsiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella	0.68 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.76 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.04 %
Klebsiella pneumoniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	0.68 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_37550	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
2228664022\|INPgaii200_c1086250	Not Available	733	Open in IMG/M
3300003659\|JGI25404J52841_10134686	Not Available	523	Open in IMG/M
3300003994\|Ga0055435_10011812	All Organisms → cellular organisms → Bacteria → Proteobacteria	1684	Open in IMG/M
3300004009\|Ga0055437_10089728	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300004019\|Ga0055439_10336832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	501	Open in IMG/M
3300004020\|Ga0055440_10033176	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300004022\|Ga0055432_10018338	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300004022\|Ga0055432_10151722	Not Available	643	Open in IMG/M
3300004267\|Ga0066396_10001737	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300004633\|Ga0066395_10065766	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1653	Open in IMG/M
3300004633\|Ga0066395_10209262	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300005172\|Ga0066683_10079726	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1971	Open in IMG/M
3300005172\|Ga0066683_10787831	Not Available	554	Open in IMG/M
3300005186\|Ga0066676_10377928	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300005332\|Ga0066388_102068089	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1023	Open in IMG/M
3300005332\|Ga0066388_102776388	Not Available	894	Open in IMG/M
3300005332\|Ga0066388_105423912	Not Available	646	Open in IMG/M
3300005356\|Ga0070674_100827426	Not Available	801	Open in IMG/M
3300005367\|Ga0070667_101856882	Not Available	567	Open in IMG/M
3300005434\|Ga0070709_11105005	Not Available	634	Open in IMG/M
3300005440\|Ga0070705_100014135	All Organisms → cellular organisms → Bacteria → Proteobacteria	4100	Open in IMG/M
3300005445\|Ga0070708_100822401	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300005446\|Ga0066686_10152792	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300005468\|Ga0070707_100824318	Not Available	892	Open in IMG/M
3300005518\|Ga0070699_101012826	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005526\|Ga0073909_10580914	Not Available	551	Open in IMG/M
3300005545\|Ga0070695_101407440	Not Available	578	Open in IMG/M
3300005558\|Ga0066698_10857709	Not Available	584	Open in IMG/M
3300005713\|Ga0066905_100039274	All Organisms → cellular organisms → Bacteria	2786	Open in IMG/M
3300005713\|Ga0066905_100139339	All Organisms → cellular organisms → Bacteria	1727	Open in IMG/M
3300005719\|Ga0068861_100246402	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300005764\|Ga0066903_106475059	Not Available	610	Open in IMG/M
3300005829\|Ga0074479_10739452	All Organisms → cellular organisms → Bacteria → Proteobacteria	3587	Open in IMG/M
3300005836\|Ga0074470_10234801	All Organisms → cellular organisms → Bacteria → Proteobacteria	24062	Open in IMG/M
3300005842\|Ga0068858_100531055	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300005983\|Ga0081540_1014021	All Organisms → cellular organisms → Bacteria	5169	Open in IMG/M
3300006163\|Ga0070715_10529479	Not Available	679	Open in IMG/M
3300006573\|Ga0074055_10949366	Not Available	512	Open in IMG/M
3300006852\|Ga0075433_10573810	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	991	Open in IMG/M
3300006852\|Ga0075433_10601560	Not Available	965	Open in IMG/M
3300006854\|Ga0075425_100011151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	9600	Open in IMG/M
3300007076\|Ga0075435_100007097	All Organisms → cellular organisms → Bacteria → Proteobacteria	7955	Open in IMG/M
3300007258\|Ga0099793_10621112	Not Available	542	Open in IMG/M
3300009101\|Ga0105247_10563900	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	839	Open in IMG/M
3300010043\|Ga0126380_10031873	All Organisms → cellular organisms → Bacteria	2672	Open in IMG/M
3300010043\|Ga0126380_10602143	Not Available	865	Open in IMG/M
3300010046\|Ga0126384_10014292	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5019	Open in IMG/M
3300010046\|Ga0126384_10187024	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1628	Open in IMG/M
3300010046\|Ga0126384_10813364	Not Available	837	Open in IMG/M
3300010046\|Ga0126384_11171632	Not Available	708	Open in IMG/M
3300010047\|Ga0126382_10017036	All Organisms → cellular organisms → Bacteria	3681	Open in IMG/M
3300010047\|Ga0126382_10110864	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1797	Open in IMG/M
3300010047\|Ga0126382_10365515	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300010047\|Ga0126382_11085844	Not Available	708	Open in IMG/M
3300010048\|Ga0126373_10028997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4768	Open in IMG/M
3300010048\|Ga0126373_10546083	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300010048\|Ga0126373_11539806	Not Available	730	Open in IMG/M
3300010329\|Ga0134111_10376625	Not Available	604	Open in IMG/M
3300010358\|Ga0126370_12203037	Not Available	543	Open in IMG/M
3300010359\|Ga0126376_10665276	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300010360\|Ga0126372_10320269	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1374	Open in IMG/M
3300010366\|Ga0126379_12189947	Not Available	654	Open in IMG/M
3300010376\|Ga0126381_100306586	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2176	Open in IMG/M
3300010376\|Ga0126381_100846858	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300010376\|Ga0126381_102166858	Not Available	800	Open in IMG/M
3300010376\|Ga0126381_104566622	Not Available	534	Open in IMG/M
3300010398\|Ga0126383_13228360	Not Available	533	Open in IMG/M
3300010403\|Ga0134123_10233129	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1590	Open in IMG/M
3300012208\|Ga0137376_11614282	Not Available	540	Open in IMG/M
3300014269\|Ga0075302_1058939	Not Available	790	Open in IMG/M
3300014875\|Ga0180083_1069244	Not Available	747	Open in IMG/M
3300014885\|Ga0180063_1007525	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2903	Open in IMG/M
3300014968\|Ga0157379_11363395	Not Available	686	Open in IMG/M
3300015264\|Ga0137403_10045523	All Organisms → cellular organisms → Bacteria	4550	Open in IMG/M
3300015371\|Ga0132258_10786829	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2398	Open in IMG/M
3300016357\|Ga0182032_11079775	Not Available	688	Open in IMG/M
3300016422\|Ga0182039_10984533	Not Available	756	Open in IMG/M
3300018063\|Ga0184637_10332764	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	915	Open in IMG/M
3300018082\|Ga0184639_10490346	Not Available	622	Open in IMG/M
3300021064\|Ga0206225_1107705	Not Available	600	Open in IMG/M
3300021560\|Ga0126371_10133390	All Organisms → cellular organisms → Bacteria	2525	Open in IMG/M
3300021560\|Ga0126371_10282517	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300025165\|Ga0209108_10347621	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300025521\|Ga0210083_1023753	All Organisms → cellular organisms → Bacteria → Proteobacteria	869	Open in IMG/M
3300025551\|Ga0210131_1017868	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1017	Open in IMG/M
3300025558\|Ga0210139_1041193	Not Available	924	Open in IMG/M
3300025558\|Ga0210139_1113495	Not Available	556	Open in IMG/M
3300025569\|Ga0210073_1017793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	1395	Open in IMG/M
3300025569\|Ga0210073_1022713	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1251	Open in IMG/M
3300025580\|Ga0210138_1156803	Not Available	559	Open in IMG/M
3300025910\|Ga0207684_10625866	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	918	Open in IMG/M
3300025935\|Ga0207709_11619038	Not Available	538	Open in IMG/M
3300026343\|Ga0209159_1087334	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1387	Open in IMG/M
3300026537\|Ga0209157_1133612	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300027646\|Ga0209466_1002628	All Organisms → cellular organisms → Bacteria	3696	Open in IMG/M
3300027654\|Ga0209799_1000402	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7987	Open in IMG/M
3300027815\|Ga0209726_10008696	All Organisms → cellular organisms → Bacteria	10831	Open in IMG/M
3300028381\|Ga0268264_10177255	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1933	Open in IMG/M
3300028792\|Ga0307504_10302135	Not Available	603	Open in IMG/M
3300031543\|Ga0318516_10068858	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300031640\|Ga0318555_10021437	All Organisms → cellular organisms → Bacteria	3041	Open in IMG/M
3300031668\|Ga0318542_10109548	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1341	Open in IMG/M
3300031720\|Ga0307469_11206600	Not Available	715	Open in IMG/M
3300031740\|Ga0307468_100006497	All Organisms → cellular organisms → Bacteria	4172	Open in IMG/M
3300031747\|Ga0318502_10096925	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1630	Open in IMG/M
3300031805\|Ga0318497_10164105	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1220	Open in IMG/M
3300031820\|Ga0307473_10006973	All Organisms → cellular organisms → Bacteria	3805	Open in IMG/M
3300031820\|Ga0307473_10072200	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1735	Open in IMG/M
3300031834\|Ga0315290_10116587	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2268	Open in IMG/M
3300031834\|Ga0315290_10647243	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300031873\|Ga0315297_10606120	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300031879\|Ga0306919_10632115	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300031893\|Ga0318536_10388771	Not Available	705	Open in IMG/M
3300032163\|Ga0315281_10036093	All Organisms → cellular organisms → Bacteria	6196	Open in IMG/M
3300032180\|Ga0307471_100834533	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300032205\|Ga0307472_102465584	Not Available	528	Open in IMG/M
3300032342\|Ga0315286_10669472	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300032516\|Ga0315273_11275954	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300032893\|Ga0335069_10012110	All Organisms → cellular organisms → Bacteria	12142	Open in IMG/M
3300033233\|Ga0334722_10691719	Not Available	725	Open in IMG/M
3300033433\|Ga0326726_10017265	All Organisms → cellular organisms → Bacteria	6289	Open in IMG/M
3300033814\|Ga0364930_0011451	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2940	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.44%
Host-Associated	Host-Associated	11.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Aquatic	Environmental → Aquatic	21.77%
Plants	Host-Associated → Plants	11.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.95%
Marine	Environmental → Aquatic → Marine	10.20%
Freshwater	Environmental → Aquatic → Freshwater	6.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.80%
Sediment	Environmental → Aquatic → Sediment	4.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.76%
Peat	Environmental → Terrestrial → Peat	1.36%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.68%
Floodplain	Environmental → Terrestrial → Floodplain	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.62%
Loam	Environmental → Terrestrial → Soil → Loam	14.97%
Wetlands	Environmental → Aquatic → Marine → Wetlands	10.20%
Lake	Environmental → Aquatic → Freshwater → Lake	6.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.36%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.68%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.93%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	10.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	6.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.36%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.68%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.41%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	10.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	6.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.72%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	2.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.04%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.36%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.36%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.36%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.36%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.68%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.68%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300021064	Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos B2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025521	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025551	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025558	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025580	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_00278720	2199352025	Soil	MAERPKRRPARSAPQTRLKQLETRLAHLENQLKTLRTEAAGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDSMESRAGRLTRAVRAGMRAGSRAYRGGARD
INPgaii200_10862501	2228664022	Soil	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQXNLAQTTLKNSLDSISRTLAASKGSVESQAGRLTRAVRAGMQAGSRAYRGGTRD
JGI25404J52841_101346861	3300003659	Tabebuia Heterophylla Rhizosphere	MGGYMAERPKRRPARSAAQTKLKQLESRLASLEEQLKTLRTEASGSVGATRSRLESLERRAAAQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRG
Ga0055435_100118122	3300003994	Natural And Restored Wetlands	MAERPKRRPARSAAQTRLKELEARLAHLEDQLKTLRTEASSSVGAARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRAYRGRTRN*
Ga0055437_100897282	3300004009	Natural And Restored Wetlands	MAERSRRRPARSAAQTQLKQLETRLAHLESQLKTLRAEAAGSVGAARAKLESLERRATDQIIRAQTTLKESLDSIARSLAASKDTVGFEAGRLTRAVRAGVQAGTRAYRRRARR*
Ga0055437_100902112	3300004009	Natural And Restored Wetlands	HLEDQLKTLRTEASSSVGAARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRAYRGRTRD*
Ga0055439_103368321	3300004019	Natural And Restored Wetlands	MAERPKRRPARSAAQTRLKELEARLAHLEDQLKTLRTEASSSVGAARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAG
Ga0055440_100331761	3300004020	Natural And Restored Wetlands	MAERPKRRPARSAAQTRLKELEARLVHLEDQLKTLRTEASSSVGTARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRA
Ga0055432_100183382	3300004022	Natural And Restored Wetlands	MAERPKRRPARSAAQTRLKELEARLVHLEDQLKTLRTEASSSVGTARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRAYRGRTRN*
Ga0055432_101517221	3300004022	Natural And Restored Wetlands	MTERSKRRPARRATRTPLKELETRLAHLESQLRALRTEASGSVGAARARLENLERRAAGQITRAQSTLKESLDSIARTVTASKEAMGFKADRLTRAVRAGVKAGTRAYRRRARR*
Ga0066396_100017371	3300004267	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLEARLAHLEDQLQTLRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0066395_100657662	3300004633	Tropical Forest Soil	GEAWGTTEVVEGSSRKTGGDMAERPKRRPARSAAQTKLKQLEARLAHLEDQLQTLRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0066395_102092622	3300004633	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLESRLASLEDQLKTLRTEASSSVGATRSRLESLERRVAAQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYHGGPRD*
Ga0066683_100797262	3300005172	Soil	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLKTLRSEASGSVGATRTRLESLERRAAAQINLAQTTLKNSLDSISRTLASSKGSVESQADRLTRAVRAGMQAGSRAYRGGTRD*
Ga0066683_107878311	3300005172	Soil	MAEKARRRPARSAAQNRLKQLETRLAHLETQLKTLRTQTSGSVGATRAKLETLERRVAEQIARAQTTLKESLDSITRTLAASKDTVELRASRLTRAVRAGVR
Ga0066676_103779282	3300005186	Soil	MAERPKRRPARSAPQSRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKGSVGSQAGRLTRAVRAGMQAGSRAYRGGTRD*
Ga0066388_1020680891	3300005332	Tropical Forest Soil	GEAWGTTEVVEGSSRKTGGDMAERPKRRPARSAAQTKLKQLEARLAHLEDQLKTLRSEASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0066388_1027763881	3300005332	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLESRLASLEDQLKTLRTEASSSVGATRSRLESLERRVAAQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRGGTRD*
Ga0066388_1054239122	3300005332	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLESRLASLEDQLKTLRTEASGSVGATRSRLESLERRVAAQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRGGTRD*
Ga0070674_1008274262	3300005356	Miscanthus Rhizosphere	ASQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDGMESQAGRLTRAVRAGMRASSRAYRGGTRD*
Ga0070667_1018568821	3300005367	Switchgrass Rhizosphere	QLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDSMESQAGRLTRAVRAGMRASSRAYRGGTRD*
Ga0070709_111050052	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAERPKRRPARSAPQTRLKQLEKRLAYLENQLKTLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKDSMESQAGRLTRAVRAGMRASSRAYRGGTRD*
Ga0070705_1000141355	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDSMESQAGRLTRAVRAGMRASSRAYRGGTRD*
Ga0070708_1008224012	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRAKLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDSVESQAGRLTRAVRAGMRASSRAYRGGTRA*
Ga0066686_101527922	3300005446	Soil	MAERPKRRPARSAPQSRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKGSVESQAGRLTRAVRAGMQAGSRAYRGGTRD*
Ga0070706_1018410001	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	HLENQLETLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKGSVESQAGRLTRAVRAGMQAGSRAYRVGTRD*
Ga0070707_1008243182	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKGSVESQAGRLTRAVRAGMQAGSRAYRVGTRD*
Ga0070699_1010128261	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLETLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKGSVESQAGRLTRAVRAGMQAG
Ga0073909_105809142	3300005526	Surface Soil	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQATLKNSLDSISRTLAASKDSMESKAGRLTRAVRAGMRAGS
Ga0070695_1014074402	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDGMESQAGRLTRAVRAG
Ga0070696_1010877792	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	TLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDGMESQAGRLTRAVRAGMRASSRAYRGGTRD*
Ga0070704_1007483731	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	AHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDSMESQAGRLTRAVRAGMRASSRAYRGGTRD*
Ga0066695_102723982	3300005553	Soil	EASGSVGATRTRLESLERRAAAQINLAQTTLKNSLDSISRTLASSKGSVESQADRLTRAVRAGMQAGSRAYRGGTRD*
Ga0066698_108577092	3300005558	Soil	APQSRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKGSVESQAGRLTRAVRAGMQAGSRAYRGGTRD*
Ga0066905_1000392742	3300005713	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLESRLASLENQLKTLRTEASGSVGATRSRLESLERRAAAQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRGGTRD*
Ga0066905_1001393392	3300005713	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLEARLAHLEDQLKTLRTEASNSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLAASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0068861_1002464022	3300005719	Switchgrass Rhizosphere	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDGMESQAGRLTRAVRAGMRASSRAYRGGTRD*
Ga0066903_1064750591	3300005764	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLESRLASLEDQLKTLRTEASGSVGATRSRLESLERRVATQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRGGTRD*
Ga0074479_105608961	3300005829	Sediment (Intertidal)	LQTLRTEASGSVGAARAKLESLERRAAAQINLAQTTLKHSLDSITRTLAASKDTVETKAGRLTRAVRAGMRAGSRAYRGRTRD*
Ga0074479_107394523	3300005829	Sediment (Intertidal)	MAEKPKRRPVRSAAQTRLKQLEARLARLEDQLQTLRTEASGSVGAARAKLESLERSAAAQINLAQTTLKHSLDSITRTLAASKDTVETKAGRLTRAVRAGMRAGSRAYRGRTRD*
Ga0074470_1023480119	3300005836	Sediment (Intertidal)	MAERPKRRPARSAAQTRLKELEARLAHLEDQLKTLRTEASSSVGAARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRAYRGRTRD*
Ga0068858_1005310552	3300005842	Switchgrass Rhizosphere	MAERPKRRPARSAAQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDSMESQAGRLTRAVRAGMRASSRAYRGGTR
Ga0081540_10140216	3300005983	Tabebuia Heterophylla Rhizosphere	MAERPKRRPARSAAQTKLKQLESRLASLEEQLKTLRTEASGSVGATRSRLESLERRAAAQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRGGTRD*
Ga0070715_105294792	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	SAPQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDSMESQAGRLTRAVRAGMRASSRAYRGGTRD*
Ga0074055_109493662	3300006573	Soil	MAERPKRRPARSAPQTRLKQLEKRLAHLESQLKTLRSEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKGSVESQAGRLTRAVRAGMQAGSRAYRGGTRD
Ga0075433_105738102	3300006852	Populus Rhizosphere	PARSAAQTKLKQLEARLANLEDQLKTLRIEASGSVGATRSRLERLERRAAAQITQAQNTLKQSLDTITRTLAASRDSVESRAGRLRRAVRAGMQASRRAYRGGTRD*
Ga0075433_106015602	3300006852	Populus Rhizosphere	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKGSVESQAGRLTRAVRAGMQAGSRAYRGGTRD*
Ga0075425_1000111518	3300006854	Populus Rhizosphere	MAERSKRPARSAAQTKLKQLEARLANLEDQLKTLRIEASGSVGATRSRLERLERRAAAQITQAQNTLKQSLDTITRTLAASRDSVESRAGRLRRAVRAGMQASRRAYRGGTRD*
Ga0075435_1000070972	3300007076	Populus Rhizosphere	MAERPKRPARSAAQTKLKQLEARLANLEDQLKTLRIEASGSVGATRSRLERLERRAAAQITQAQNTLKQSLDTITRTLAASRDSVESRAGRLRRAVRAGMQASRRAYRGGTRD*
Ga0099793_106211121	3300007258	Vadose Zone Soil	MVEKSRRRPARSAAQNRLKQLEARLALLESQLKTLRTQTSGSVGAARAKLETLERRAADQSARAQAMLKESLDSITRSLTASKDTVELGASRLTRAVR
Ga0105247_105639001	3300009101	Switchgrass Rhizosphere	MAERPKRRPARSAPQTRLKQLEKRLAYLENQLKTLRTEASGSVGATRARLESLERRAAAQTNLAQTTLKNSLDSISRTLAASKDSMESQAGRLTRAVRAGMRASSRAYRGGTRD*
Ga0066709_1043805811	3300009137	Grasslands Soil	LENQLKTLRSEASGSVGATRTRLESLERRAAAQINLAQTTLKNSLDSISRTLASSKGSVESQADRLTRAVRAGMQAGSRAYRGGTRD*
Ga0126374_110193421	3300009792	Tropical Forest Soil	LASLEDQLKTLRTEASGSVGATRSRLESLERRVATQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRGGTRD*
Ga0126380_100318733	3300010043	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLESRLASLEDQLKTLRIEASGSVGATRSRLESLERRAAAQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRGGTRD*
Ga0126380_106021432	3300010043	Tropical Forest Soil	MAERPKHRPARSAAQTKLKQLEARLAHLEDQLKTLRTEASNSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLAASRDSVGSNAGRLTRAVRAGMRASRRAYRGRTHH*
Ga0126384_100142926	3300010046	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLESRLASLEDQLKTLRTEASSSVGATRSRLESLERRVAAQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYHGGTRD*
Ga0126384_101870241	3300010046	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLEARLAHLEDQLQTLRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRVVRAGMRASRRAYRGGTHH*
Ga0126384_108133642	3300010046	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLETRLAHLEDQLNTLRTEASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLAASRDRVGSNAGRLTRAAQAGMRASRRAYRGGTHH*
Ga0126384_111716321	3300010046	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLEARLAHLEDQLKTLRSEASSSVGATRSRLESLERRATTQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0126382_100170361	3300010047	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLESRLASLEDQLKTLRTEASGSVGATRSRLESLERRAAAQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRGGTRD*
Ga0126382_101108642	3300010047	Tropical Forest Soil	MAERPKHRPARSAAQTKLKQLEARLAHLEDQLKTLRTEASNSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLAASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0126382_103655152	3300010047	Tropical Forest Soil	MAERSRRSPARSAAQNRLKQLETRLAHLESQLKTLRAQTTGSVGAARAKLESLERRAAAQITRAQGTLKDSLDSITRTLAASKGTVESRASRLT
Ga0126382_110858441	3300010047	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLETRLAHLEDQLNTLRTEASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLAASRDRVGSNAGRLTRAAQAGMRASRRA
Ga0126373_100289971	3300010048	Tropical Forest Soil	KTGGDMAERPKRRPARSAAQTKLKQLEARLAHLEDQLQTLRSEASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0126373_105460831	3300010048	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLEARLAHLEDQLQTLRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAV
Ga0126373_115398062	3300010048	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLEARLALLEDQLKTLRSEASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRNSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0134111_103766251	3300010329	Grasslands Soil	ARSAPQTRLKQLEKRLAHLENQLKTLRSEASGSVGATRTRLESLERRAAAQINLAQTTLKNSLDSISRTLASSKGSVESQADRLTRAVRAGMQAGSRAYRGGTRD*
Ga0134071_102406781	3300010336	Grasslands Soil	KTLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKGSVESQAGRLTRAVRAGMQAGSRAYRGGTRD*
Ga0126370_122030371	3300010358	Tropical Forest Soil	AQTKLKQLESRLASLEDQLKTLRTEASGSVGATRSRLESLERRVATQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRGGTRD*
Ga0126376_106652762	3300010359	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLEARLAHLEDQLKTLRSEASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRNSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0126372_103202692	3300010360	Tropical Forest Soil	SIRKTGGDMAERPKRRPARSAAQTKLKQLEARLALLEDQLKTLRSEASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRNSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0126379_105601101	3300010366	Tropical Forest Soil	DQLKTLRTEASGSVGATRSRLESLERRVATQITQAQNTLKQSLDNITRTLAASRNTVESSAGRLTRAVRAGMQAGRRAYRGGTRD*
Ga0126379_121899472	3300010366	Tropical Forest Soil	PALDGLRQSVESQEACPWTGLEVQLKVSDGSSREAGGDRAERPKHRPARSAAQTKLKQLEARLALLEDQLKTLRSEASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRNSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0126379_137432902	3300010366	Tropical Forest Soil	DQLKTLRTEASGSVGATRSRLESLERRVATQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRGGTRD*
Ga0126381_1003065863	3300010376	Tropical Forest Soil	EVVEGSSRKTGGDMAERPKRRPARSAAQTKLKQLEARLAHLEDQLQTLRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0126381_1008468582	3300010376	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLEARLAHLEDQLKTLRSEASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0126381_1021668582	3300010376	Tropical Forest Soil	EVVEGSSRKTGGDMAERPKRRPARSAAQTKLKQLEARLAHLEDQLKTLRSEASSSVGATRSRLESLERRATTQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0126381_1045666221	3300010376	Tropical Forest Soil	RPKRRPARSAAQTKLKQLESRLASLEDQLKTLRTEASSSVGATRSRLESLERRVAAQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRGGTRD*
Ga0126383_132283602	3300010398	Tropical Forest Soil	EVVEGSSRKTGGDMAERPKRRPARSAAQTKLKQLEARLAHLEDQLKTLRSEASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0134123_102331292	3300010403	Terrestrial Soil	MAERPKRRPARSAAQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDGMESQAGRLTRAVRAGMRASSRAYRGGTRD*
Ga0137376_116142821	3300012208	Vadose Zone Soil	MAEKARRRPARSAAQNRLKQLETRLAHLETQLKTLRTQTSGSVGATRAKLETLERRAAEQIARAQTTLKESLDSITRTLAASKDTVELRASRLTRAV
Ga0126375_104974541	3300012948	Tropical Forest Soil	LANLEDQLKTLRIEASGSIGATRSRLEGLERRAAAQITQAQNTLKQSLDTITRTLAASRDSMESRAGRLRRAVRAGMQASRRAYRGGTRD*
Ga0126375_109977741	3300012948	Tropical Forest Soil	DQLKTLRTEASNSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLAASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH*
Ga0126375_119266541	3300012948	Tropical Forest Soil	DQLKTLRIEASGSVGATRSRLESLERRVAAQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRGGTRD*
Ga0075302_10589391	3300014269	Natural And Restored Wetlands	RSAPQTRHKELEARLAHLEDQLKTLRTEASSSVGAARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRAYRGRTRD*
Ga0180083_10692442	3300014875	Soil	MAERPKRSPARSTAQTQLKQLETRIAHLEKQLKTVRADASSSVGAARAKLEGLERRAADQITRVQATLKESLDSIARTLAASKDTVGFKAGRLTRAVRAGVEAGTRAYRRRARRR*
Ga0180063_10075253	3300014885	Soil	MAERSKRRPARSAAQTQLKQLETRLAHLESQLKTLRAEASGSVGAARAKLESLERRAADQITRAQTTLKESLDSIARTLAASKDTGGFKAGRLTRAVRAGVEAGTRAYRRRARR*
Ga0157379_113633952	3300014968	Switchgrass Rhizosphere	ARSAPQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDSMESQAGRLTRAVRAGMRASSRAYRGGTRD*
Ga0137403_100455236	3300015264	Vadose Zone Soil	KQLEARLALLENQLKTLRTQTSGSVGAARAKLETLERRAADQIARAQAMLKESLDSITRSLTASKDTVELGASRLTRAVRAGVQAGTRAYRRRTRG*
Ga0132258_107868292	3300015371	Arabidopsis Rhizosphere	MAERPKRRPARSAPQTRLKQLETRLAHLENQLKTLRTEAAGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASRDSMESRAGRLTRAVRAGMRAGSRAYRGGARD*
Ga0182032_110797752	3300016357	Soil	MAERPKRRPARSAAQTKLKQLEARLAHLEDQLQTLRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGG
Ga0182039_109845332	3300016422	Soil	ERPKRRPARSAAQTKLKQLEARLAHLEDQLQTLRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH
Ga0184637_103327641	3300018063	Groundwater Sediment	MAERSKRRPARSAAQTRLKQLDTRLAHLESQLKTLRAEASGSVGAARAKLESLERRAADQITRAQTTLKESLDSIARTLAASKEAVGFKADRLTRAVRAGVQAGTRAYRRRARR
Ga0184639_104903461	3300018082	Groundwater Sediment	MVERSKRRPARSAAQTRLKQLETRLAHLESQLKTLRAEASGSVGAARAKLESLERRAVDQITHAQTTLKESLDSIARTLAASKEAMGFKADRLTRAVRAGVQAGTRAYRRRARR
Ga0206225_11077052	3300021064	Deep Subsurface Sediment	MAEPSRRRPARSAAQTRLKQLETRLAHLESQLKTLRAEASGSVGAARAKLESLERRAADQITRAQTTLKESLDSIARTLAASKEAMGFKADRLTRAVRAGVEAGTRAYRGRARR
Ga0126371_101333902	3300021560	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLEARLAHLEDQLQTLRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH
Ga0126371_102825173	3300021560	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLESRLASLEDQLKTLRTEASSSVGATRSRLESLERRVAAQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRGGTRD
Ga0209108_103476212	3300025165	Soil	MTERSKRRPARSAAQTRLKQLETRLAHLESQLKTLRAEASGSVGAARAKLESLERRAADQIARAQTTLKESLDSIARTVAASKEAMGFKADRLTRAVRAGVEA
Ga0210083_10237531	3300025521	Natural And Restored Wetlands	MAERPKRRPARSAAQTRLKELEARLVHLEDQLKTLRTEASSSVGTARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRAYRGRTRN
Ga0210131_10178682	3300025551	Natural And Restored Wetlands	MAERPKRRPARSAAQTRLKELEARLAHLEDQLKTLRTEASSSVGAARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRAYRGRTRN
Ga0210139_10411932	3300025558	Natural And Restored Wetlands	MAERPKRRPARSAAQTRLKELEARLVHLEDQLKTLRTEASSSVGTARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRAYRGRTRD
Ga0210139_11134951	3300025558	Natural And Restored Wetlands	MAERSRRRPARSAAQTQLKQLETRLAHLESQLKTLRAEAAGSVGAARAKLESLERRATDQIIRAQTTLKESLDSIARSLAASKDTVGFEAGRLTRAVRAGVQAGTRAYRRRARR
Ga0210108_10180651	3300025560	Natural And Restored Wetlands	LRTEASSSVGAARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRAYRGRTRD
Ga0210073_10177931	3300025569	Natural And Restored Wetlands	MAERSRRRPARSAAQTQLKQLETRLAHLESQLKTLRAEAAGSVGAARAKLESLERRATDQIIRAQTTLKESLDSIARSLAASKDTVGFEAGRLTRAVRAGVQA
Ga0210073_10227132	3300025569	Natural And Restored Wetlands	MAERPKRRPARSAAQTRLKELEARLAHLEDQLKTLRTEASSSVGAARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRAYRGRTRD
Ga0210138_11568031	3300025580	Natural And Restored Wetlands	EACPWTGLEVEVMVSFVSSRDTGGHMAERPKRRPARSAAQTPLKELEARLVHLEDQLKTLRTEASSSVGTARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRAYRGRTRN
Ga0207684_106258662	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	QTRLKQLEKRLAHLENQLETLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKGSVESQAGRLTRAVRAGMQAGSRAYRVGTRD
Ga0207709_116190381	3300025935	Miscanthus Rhizosphere	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDSMESQAGRLTRAVRAGMRASSRAYRGGTRD
Ga0207669_103450772	3300025937	Miscanthus Rhizosphere	SLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDGMESQAGRLTRAVRAGMRASSRAYRGGTRD
Ga0207675_1017308661	3300026118	Switchgrass Rhizosphere	LAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDGMESQAGRLTRAVRAGMRASSRAYRGGTRD
Ga0209159_10873342	3300026343	Soil	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLKTLRSEASGSVGATRTRLESLERRAAAQINLAQTTLKNSLDSISRTLASSKGSVESQADRLTRAVRAGMQAGSRAYRGGTRD
Ga0209157_11336122	3300026537	Soil	MAERPKRRPARSAPQSRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKGSVESQAGRLTRAVRAGMQAGSRAYRGGTRD
Ga0209466_10026285	3300027646	Tropical Forest Soil	QTKLKQLEARLAHLEDQLKTLRTEASNSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLAASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH
Ga0209799_10004028	3300027654	Tropical Forest Soil	MAERPKRRPARSAAQTKLKQLESRLASLEDQLKTLRTEASSSVGATRSRLESLERRVAAQITQAQNTLKQSLDNITRTLAASRNSVESRAGRLTRAVRAGMQAGRRAYHGGTRD
Ga0209726_100086965	3300027815	Groundwater	MTERSKRRPARSAAQTRLKQLETRLAHLESQLKTLRAEASGSVGAARAKLESLERRAADQITRAQTTLKESLDSIARTLAASKEAMGFKADRLTRAVRAGVEAGTRAYRGRARR
Ga0268264_101772553	3300028381	Switchgrass Rhizosphere	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDGMESQAGRLTRAVRAGMRASSRAYRGGTRD
Ga0307504_103021352	3300028792	Soil	MAEKSRRRPARSAAQNRLKQLEARLALLESQLKTLRTQTSGSVGAARAKLEALERRAADQIARAQTTLKESLDSITRSLTASKDTVELGASRLTRA
Ga0318516_100688583	3300031543	Soil	MAERPKRRPARSAAQTKLKQLEARLAHLEDQLQTLRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVR
Ga0318573_100774422	3300031564	Soil	LRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH
Ga0318555_100214374	3300031640	Soil	MAERPKRRPARSAAQTKLKQLEARLAHLEDQLQTLRREASSSVGATRSRLESLERRAATQIRQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRA
Ga0318542_101095481	3300031668	Soil	KLKQLEARLAHLEDQLQTLRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH
Ga0318574_100755231	3300031680	Soil	DQLQTLRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH
Ga0307469_112066001	3300031720	Hardwood Forest Soil	RPKRRPARSAPQTRLKQLEKRLAHLENQLETLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKGSVESQAGRLTRAVRAGMQAGSRAYRVGTRD
Ga0307468_1000064971	3300031740	Hardwood Forest Soil	MAERPKRRPARSAPQTRLKQLEKRLAHLETQLKTLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKDSMESQAGRLTRAVRAGMRASSRAYRGGTRD
Ga0307468_1000274894	3300031740	Hardwood Forest Soil	LRTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDGMESQAGRLTRAVRAGMRASSRAYRGGTRD
Ga0307468_1015295971	3300031740	Hardwood Forest Soil	SVGAARAKLETLERRAAKQITRAQTTLKDSLDSITRTLAASKDTVEFKASRLTRAVRAGVQAGTRAYRRRARR
Ga0318502_100969252	3300031747	Soil	QLEARLAHLEDQLQTLRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH
Ga0318497_101641051	3300031805	Soil	PARSAAQTKLKQLEARLAHLEDQLQTLRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRRAYRGGTHH
Ga0307473_100069732	3300031820	Hardwood Forest Soil	MAERPKRRPARSAAQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQLNLAQTTLKNSLDSISRTLAASKDGMESQAGRLTRAVRAGMRASSRAYRGGTRD
Ga0307473_100722002	3300031820	Hardwood Forest Soil	MAERPKRRPARSAPQTRLKQLEKRLAHLENQLETLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKGSVESQAGRLTRAVRAGMQAGSRAYRVGTRD
Ga0315290_101165872	3300031834	Sediment	MAEKPKRRPVRSAAQTRLKQLETRLARLEEQLQTLRTEASGSVGAARAKLESLERRAAVQINLAQTTLKHSLDSITRTLAASKDTVETKASRLTRAVRAGMRAGSQAYRGRTRD
Ga0315290_106472432	3300031834	Sediment	MAEPSKRRPARSAAQTQLKQLETRLAHLESQLKALRAEASGSVGAARAKLESLERRAADQITRAQTTLKESLDSIARTLAASKEAMGFKADRLTRAVRAGVQAGTRAYRGRARR
Ga0315297_106061202	3300031873	Sediment	MAEPSKRRPARSAAQTQLKQLETRLAHLESQLKTLRVEASGSVGAARAKLESLERRAADQITRAQTTLKESLDSIARTLAASKEAMGFKADRLT
Ga0306919_106321151	3300031879	Soil	MAERPKRRPARSAAQTKLKQLEARLAHLEDQLQTLRREASSSVGATRSRLESLERRAATQISQAQHTLKQSLDSITRTLTASRDSVGSNAGRLTRAVRAGMRASRR
Ga0318536_103887711	3300031893	Soil	MAERPKRRLARSAAQTKLKQLESRLASLEDQLKTLRTEASSSVGATRSRLESLERRVAAQITQAQNTLKQSLDNITRTLAASRNSVESSAGRLTRAVRAGMQAGRRAYRGGTRD
Ga0315281_100360936	3300032163	Sediment	MAERSKPRPARSAAQTRLKQLETRLAHLESQLKTLRAEASGSVGAARAKLESLERRAADQITRAQTTLKESLDSIARTLAASKEAMGFKADRLTRAVRAGVQAGTRAYRRRARR
Ga0315281_113895462	3300032163	Sediment	TRLARLEEQLQTLRTEASGSVGAARAKLESLERRAAVQINLAQTTLKHSLDSITRTLAASKDTVETKASRLTRAVRAGMRAGSQAYRGRTRD
Ga0307471_1008345332	3300032180	Hardwood Forest Soil	MAERSRRRPARSAAQNRLKQLEERLAHLESQLKMLRTQTSGSVGAARAKLETLERRAAKQITRAQTTLKDSLDSITRTLAASKDTVEFKASRLTRAVRAGVQAGTRAYRRRARR
Ga0307472_1024655841	3300032205	Hardwood Forest Soil	PQTRLKQLEKRLAHLENQLKTLRTEASGSVGATRARLESLERRAAAQINLAQTTLKNSLDSISRTLAASKDSVESQAGRLTRAVRAGMRASSRAYRGGTRD
Ga0315271_119295972	3300032256	Sediment	RLARLEEQLQTLRTEASGSVGAARAKLESLERRAAVQINLAQTTLKHSLDSITRTLAASKDTVETKASRLTRAVRAGMRAGSQAYRGRTRD
Ga0315286_106694722	3300032342	Sediment	MAEKPKRRPVRSAAQTRLKQLETRLARLEEQLQTLRTEASGSVGAARAKLESLERRAAVQINLAQTTLKHSLDSITRTLAASKDTVETKASRLTRAVRAGMRAGS
Ga0315273_112759541	3300032516	Sediment	MAEKPKRRPVRSAAQTRLKQLETRLARLEEQLQTLRTEASGSVGAARAKLESLERRAAVQINLAQTTLKHSLDSITRTLAASKDTVETKASRLTRAVRAGMRAGSQAYR
Ga0335069_100121109	3300032893	Soil	MAERPKRRPARSAAQTQLKELETRLAHLEDQLKTLRTEASSSVGTARAKLEGLERRAAAQINVAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRAYRGRTRG
Ga0334722_106917192	3300033233	Sediment	MAEPSRRRPARSAAQTRLKQLETRLAHLESQLKTLRAEASGSVGAARAKLESLERRAADQITRAQTTLKESLDSIARTLAASKEAMGFKADRLTRAVRAGVQAGTRAYRGRARR
Ga0326726_100172654	3300033433	Peat Soil	MAERPKRRPARSAAQTRLKELETRLAHLEDQLKTLRTEASSSVGSARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRAYRGRTRG
Ga0364930_0011451_1100_1444	3300033814	Sediment	MAERSKRRPARSAAQTRLKQLETRLAHLESQLKTLRAEASGSVGAARAKLESLERRAADQITRAQTTLKESLDSIARTLAASKETMGFKADRLTRAVRAGVEAGARAYRRRARR
Ga0326723_0007366_4009_4230	3300034090	Peat Soil	SVGSARAKLEGLERRAAAQINLAQTTLKNSLDSITRTLAASKDTVESKAGRLTRAVRAGMRAGSRAYRGRTRG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049252

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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