NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F049211

Metagenome / Metatranscriptome Family F049211

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F049211
Family Type Metagenome / Metatranscriptome
Number of Sequences 147
Average Sequence Length 58 residues
Representative Sequence MDASLYFRLRDRIDGAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM
Number of Associated Samples 113
Number of Associated Scaffolds 147

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 41.50 %
% of genes near scaffold ends (potentially truncated) 36.05 %
% of genes from short scaffolds (< 2000 bps) 73.47 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (53.741 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(13.605 % of family members)
Environment Ontology (ENVO) Unclassified
(43.537 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(63.946 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.33%    β-sheet: 0.00%    Coil/Unstructured: 47.67%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.70
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.110.2.1: GAF domaind2oola12ool0.85621
a.2.7.0: automated matchesd6p24c16p240.82401
d.67.3.1: Ribosome recycling factor, RRFd1ek8a_1ek80.76852
a.24.9.1: alpha-catenin/vinculind1dova_1dov0.76747
a.47.3.1: Cag-Zd1s2xa11s2x0.75326

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 147 Family Scaffolds
PF00719Pyrophosphatase 48.98
PF01578Cytochrom_C_asm 7.48
PF00230MIP 6.80
PF03379CcmB 5.44
PF00005ABC_tran 2.04
PF08241Methyltransf_11 1.36
PF02801Ketoacyl-synt_C 1.36
PF16177ACAS_N 1.36
PF13466STAS_2 1.36
PF00679EFG_C 0.68
PF01494FAD_binding_3 0.68
PF05239PRC 0.68
PF00691OmpA 0.68
PF06134RhaA 0.68
PF160782-oxogl_dehyd_N 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 147 Family Scaffolds
COG0221Inorganic pyrophosphataseEnergy production and conversion [C] 48.98
COG0580Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)Carbohydrate transport and metabolism [G] 6.80
COG2386ABC-type transport system involved in cytochrome c biogenesis, permease componentPosttranslational modification, protein turnover, chaperones [O] 5.44
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.36
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.68
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.68
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.68
COG4806L-rhamnose isomeraseCarbohydrate transport and metabolism [G] 0.68

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms53.74 %
UnclassifiedrootN/A46.26 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003319|soilL2_10218085All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1672Open in IMG/M
3300003324|soilH2_10042326All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2478Open in IMG/M
3300004114|Ga0062593_100020628All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis3470Open in IMG/M
3300004114|Ga0062593_100066357All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2356Open in IMG/M
3300004114|Ga0062593_100494911Not Available1131Open in IMG/M
3300004156|Ga0062589_100253978All Organisms → cellular organisms → Bacteria1320Open in IMG/M
3300004156|Ga0062589_100269426All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1292Open in IMG/M
3300004156|Ga0062589_101662918Not Available635Open in IMG/M
3300004157|Ga0062590_102269961Not Available570Open in IMG/M
3300004463|Ga0063356_102846458Not Available745Open in IMG/M
3300004479|Ga0062595_101103466Not Available694Open in IMG/M
3300005327|Ga0070658_10526651All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium1022Open in IMG/M
3300005327|Ga0070658_10879125All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300005328|Ga0070676_11023956Not Available621Open in IMG/M
3300005333|Ga0070677_10807974All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales536Open in IMG/M
3300005355|Ga0070671_100775606All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300005355|Ga0070671_101448400Not Available607Open in IMG/M
3300005356|Ga0070674_100180858All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1615Open in IMG/M
3300005364|Ga0070673_101400596Not Available658Open in IMG/M
3300005367|Ga0070667_101313694Not Available678Open in IMG/M
3300005438|Ga0070701_10057616All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2037Open in IMG/M
3300005456|Ga0070678_100504759All Organisms → cellular organisms → Bacteria1067Open in IMG/M
3300005457|Ga0070662_100025297All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis4097Open in IMG/M
3300005459|Ga0068867_100040704All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis3394Open in IMG/M
3300005518|Ga0070699_100118308All Organisms → cellular organisms → Bacteria2329Open in IMG/M
3300005526|Ga0073909_10024329All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium2009Open in IMG/M
3300005535|Ga0070684_101163949All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300005546|Ga0070696_100795602Not Available778Open in IMG/M
3300005547|Ga0070693_101053524Not Available618Open in IMG/M
3300005548|Ga0070665_100026454All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes5841Open in IMG/M
3300005578|Ga0068854_100172340All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium1685Open in IMG/M
3300005578|Ga0068854_100641124All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium911Open in IMG/M
3300005615|Ga0070702_100313765Not Available1090Open in IMG/M
3300005718|Ga0068866_10063293All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1928Open in IMG/M
3300005718|Ga0068866_10208465All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300005764|Ga0066903_104951605Not Available707Open in IMG/M
3300005843|Ga0068860_101004765Not Available852Open in IMG/M
3300006169|Ga0082029_1046691Not Available915Open in IMG/M
3300006175|Ga0070712_100239361Not Available1445Open in IMG/M
3300006358|Ga0068871_100349478Not Available1308Open in IMG/M
3300006755|Ga0079222_11203881Not Available679Open in IMG/M
3300006844|Ga0075428_100127077All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2774Open in IMG/M
3300006845|Ga0075421_100036464All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis6229Open in IMG/M
3300006845|Ga0075421_100148545All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2929Open in IMG/M
3300006845|Ga0075421_100164401All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2768Open in IMG/M
3300006845|Ga0075421_100178034All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2646Open in IMG/M
3300006845|Ga0075421_100265710All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2098Open in IMG/M
3300006846|Ga0075430_100010270All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis7928Open in IMG/M
3300006847|Ga0075431_100342220Not Available1505Open in IMG/M
3300006853|Ga0075420_101736453Not Available534Open in IMG/M
3300006876|Ga0079217_10324851All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium867Open in IMG/M
3300006881|Ga0068865_100011656All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis5507Open in IMG/M
3300006894|Ga0079215_10941354Not Available626Open in IMG/M
3300006904|Ga0075424_100027917All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis5827Open in IMG/M
3300006918|Ga0079216_10020377All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2482Open in IMG/M
3300006931|Ga0097620_101828300All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300006954|Ga0079219_10408265All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium904Open in IMG/M
3300006969|Ga0075419_10168987All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1437Open in IMG/M
3300007004|Ga0079218_10869212Not Available879Open in IMG/M
3300007004|Ga0079218_10926433Not Available860Open in IMG/M
3300007004|Ga0079218_11493244Not Available731Open in IMG/M
3300009098|Ga0105245_10948292Not Available903Open in IMG/M
3300009147|Ga0114129_12210779Not Available662Open in IMG/M
3300009156|Ga0111538_10149572All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2967Open in IMG/M
3300009176|Ga0105242_10850259All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium908Open in IMG/M
3300009551|Ga0105238_11661383Not Available669Open in IMG/M
3300009789|Ga0126307_10024707All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis4578Open in IMG/M
3300009789|Ga0126307_11354581Not Available576Open in IMG/M
3300009840|Ga0126313_10025907All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis3965Open in IMG/M
3300009840|Ga0126313_11398797Not Available580Open in IMG/M
3300011119|Ga0105246_10986579All Organisms → cellular organisms → Bacteria762Open in IMG/M
3300012469|Ga0150984_106921761Not Available523Open in IMG/M
3300012469|Ga0150984_112759595Not Available1008Open in IMG/M
3300012509|Ga0157334_1007469Not Available950Open in IMG/M
3300012909|Ga0157290_10240570Not Available637Open in IMG/M
3300012957|Ga0164303_10033397All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium2137Open in IMG/M
3300012960|Ga0164301_10047471All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2186Open in IMG/M
3300012961|Ga0164302_10245007Not Available1135Open in IMG/M
3300012985|Ga0164308_10490717Not Available1025Open in IMG/M
3300012986|Ga0164304_10599198Not Available822Open in IMG/M
3300013297|Ga0157378_11933662Not Available639Open in IMG/M
3300013307|Ga0157372_12679575Not Available572Open in IMG/M
3300013308|Ga0157375_10288801All Organisms → cellular organisms → Bacteria1803Open in IMG/M
3300013308|Ga0157375_11164536All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium904Open in IMG/M
3300014969|Ga0157376_12697362All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales537Open in IMG/M
3300015262|Ga0182007_10105560Not Available935Open in IMG/M
3300015371|Ga0132258_10344345All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis3684Open in IMG/M
3300015371|Ga0132258_11326971All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1818Open in IMG/M
3300015372|Ga0132256_101508728Not Available783Open in IMG/M
3300015373|Ga0132257_103669512Not Available559Open in IMG/M
3300018469|Ga0190270_12732565Not Available556Open in IMG/M
3300018476|Ga0190274_10078713All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2525Open in IMG/M
3300018476|Ga0190274_12865106Not Available578Open in IMG/M
3300020082|Ga0206353_11543383All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales1372Open in IMG/M
3300022756|Ga0222622_10314537All Organisms → cellular organisms → Bacteria1081Open in IMG/M
3300025315|Ga0207697_10003248All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis8085Open in IMG/M
3300025321|Ga0207656_10005237All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis4569Open in IMG/M
3300025321|Ga0207656_10120503Not Available1221Open in IMG/M
3300025321|Ga0207656_10325563Not Available764Open in IMG/M
3300025885|Ga0207653_10141151Not Available881Open in IMG/M
3300025893|Ga0207682_10606899Not Available516Open in IMG/M
3300025909|Ga0207705_11314580All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales552Open in IMG/M
3300025911|Ga0207654_11307436All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300025915|Ga0207693_10187434All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1628Open in IMG/M
3300025923|Ga0207681_10007869All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis6522Open in IMG/M
3300025923|Ga0207681_10094301All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2144Open in IMG/M
3300025931|Ga0207644_10935335Not Available727Open in IMG/M
3300025937|Ga0207669_10296838Not Available1226Open in IMG/M
3300025937|Ga0207669_11349281Not Available606Open in IMG/M
3300025938|Ga0207704_10122635All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1782Open in IMG/M
3300025944|Ga0207661_10315617All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1404Open in IMG/M
3300025972|Ga0207668_10021235All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis4138Open in IMG/M
3300026041|Ga0207639_11198232Not Available713Open in IMG/M
3300026088|Ga0207641_11333106All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium718Open in IMG/M
3300026095|Ga0207676_10501900Not Available1152Open in IMG/M
3300027691|Ga0209485_1085645Not Available866Open in IMG/M
3300027691|Ga0209485_1283672Not Available543Open in IMG/M
3300027880|Ga0209481_10415572Not Available690Open in IMG/M
3300027886|Ga0209486_10228900Not Available1065Open in IMG/M
3300027886|Ga0209486_11228608Not Available515Open in IMG/M
3300027909|Ga0209382_10205400All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2256Open in IMG/M
3300027909|Ga0209382_10220471All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2165Open in IMG/M
3300027909|Ga0209382_10260928All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1964Open in IMG/M
3300027909|Ga0209382_10333279All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1704Open in IMG/M
3300027909|Ga0209382_10657294All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium1133Open in IMG/M
3300027909|Ga0209382_10805660Not Available999Open in IMG/M
3300028379|Ga0268266_10010644All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae8015Open in IMG/M
3300028380|Ga0268265_10788333All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium925Open in IMG/M
3300028381|Ga0268264_11762698Not Available629Open in IMG/M
3300028381|Ga0268264_12146445Not Available567Open in IMG/M
3300031481|Ga0314816_1036256All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes640Open in IMG/M
3300031538|Ga0310888_10028299All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2441Open in IMG/M
3300031716|Ga0310813_11376241Not Available654Open in IMG/M
3300031716|Ga0310813_11648962Not Available600Open in IMG/M
3300031731|Ga0307405_10221293All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium1389Open in IMG/M
(restricted) 3300031825|Ga0255338_1000028All Organisms → cellular organisms → Bacteria629717Open in IMG/M
3300031852|Ga0307410_10103998All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2041Open in IMG/M
3300031938|Ga0308175_100008502All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae7558Open in IMG/M
3300031939|Ga0308174_11033304Not Available698Open in IMG/M
3300032002|Ga0307416_100413688All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium1390Open in IMG/M
3300032005|Ga0307411_11075429Not Available724Open in IMG/M
3300032005|Ga0307411_11238027Not Available678Open in IMG/M
3300032017|Ga0310899_10331932Not Available713Open in IMG/M
3300032074|Ga0308173_10479560Not Available1110Open in IMG/M
3300032126|Ga0307415_101673860Not Available613Open in IMG/M
3300032421|Ga0310812_10207183All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium852Open in IMG/M
3300033412|Ga0310810_10188461All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2347Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere13.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.52%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil8.16%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.44%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.44%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.76%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.08%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere4.08%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.40%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.40%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.72%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.72%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.04%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.04%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.36%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.36%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.36%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.36%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.68%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.68%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.68%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.68%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.68%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.68%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.68%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.68%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300006931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012509Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031481Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_N_R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031825 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T4_195EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
soilL2_1021808543300003319Sugarcane Root And Bulk SoilMDASLYFRLTDRIDGAASLEELAAIEAEIERTQPHMIERRALERRLNRRERALSGSTM*
soilH2_1004232653300003324Sugarcane Root And Bulk SoilMDASLYFRLTDRIDGAASLEELAAIEAEIERAQAHTIERQALERRLNRRERALASPSM*
Ga0062593_10002062843300004114SoilMDASLYFRLRDRIDGAASLEELVAIEAEIDSTQPHVIERRALERRLNRRERALSGPTM*
Ga0062593_10006635743300004114SoilMDASLYFRLTDRIDGAASLEELAAIVAEIERTQPHMVERRALERRLSRRESTLTGVAL*
Ga0062593_10049491113300004114SoilMDASLYFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM*
Ga0062589_10025397813300004156SoilMDASLYFRLTDRIDGAASVEELATIEAEIDRTQPHVMERRALERRLNRRERALSGAM*
Ga0062589_10026942633300004156SoilMDASLYFRLTDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM*
Ga0062589_10166291823300004156SoilMDASIYFRLTDRIDGAATIEELAVIEAEIERTQPHVMERRALERRLNRRERALSGMV*
Ga0062590_10226996113300004157SoilMDASIYFRLTDRIDGAATIEELAVIEAEIERTQPHVMERRALERRLNRRELALSGTG*
Ga0063356_10284645813300004463Arabidopsis Thaliana RhizosphereMDASLYFRLTDRIDGAASLEELVAIEAEINRTQPHVMERRALERRLNKRERALAGPLL*
Ga0062595_10110346613300004479SoilPRQPTSLHPPIAMDASLYFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM*
Ga0070658_1052665113300005327Corn RhizosphereMDAGLYFGLRDRIDGAASLEELAAIEAEIDTTQPHVMERRALERRVNRRERALSGATM*
Ga0070658_1087912533300005327Corn RhizosphereMDASIYFRLTDRIDGAGSREELAAIEAEIERTQPHVMERRALERRLNRRELALSGVAV*
Ga0070676_1102395613300005328Miscanthus RhizosphereSIYFRLTDRIDGAATIEELAVIEAEIERTQPHVMERRALERRLNRRERALSGMV*
Ga0070677_1080797433300005333Miscanthus RhizosphereTDRIDGAGSREELAAIEAEIERTQPHVMERRALERRLNRRELALSGVAV*
Ga0070671_10077560613300005355Switchgrass RhizosphereMDAGLYFGLRDRIDGAASLEELAAIEAEIDSTQPHVMERRALERRVNRRERALSGATM*
Ga0070671_10144840023300005355Switchgrass RhizosphereMDASVFFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRREQALSGAPM*
Ga0070674_10018085833300005356Miscanthus RhizosphereMDAGLYFRLSDRIDGAASLEELAAIEAEIDRTQPHVIERRALERRLNRRERVLSGPPM*
Ga0070673_10140059633300005364Switchgrass RhizosphereMDASLYFRLRDRIDDAASLDELAAIEAEIDTTQPHVMERRALQRRVNRR
Ga0070667_10131369423300005367Switchgrass RhizosphereGLRDRIDGAASLEELAAIEAEIDSTQPHVMERRALERRVNRRERALSGATM*
Ga0070701_1005761643300005438Corn, Switchgrass And Miscanthus RhizosphereYFRLTDRIDGAATIEELAVIEAEIERTQPHVMERRALERRLNRRELALSGTG*
Ga0070678_10050475923300005456Miscanthus RhizosphereMDASLYFRLTDRIDGAGSREELAAIEAEIDRTQPHVMERRALERRLNRRELALTTASV*
Ga0070662_10002529763300005457Corn RhizosphereLHPPIAMDASLYFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM*
Ga0068867_10004070423300005459Miscanthus RhizosphereMDASIFFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRREQALSGAPM*
Ga0070699_10011830813300005518Corn, Switchgrass And Miscanthus RhizosphereMDASLYFRLTDRIDGAASIEELVAIEAEIERTQPHVMERRALERRLNRRELALVGVAV*
Ga0073909_1002432913300005526Surface SoilMDASLYFRLTDRIDGAASLEELAAIEAEIDHTQPHMMERRALERRMNRRERALSGAS
Ga0070684_10116394923300005535Corn RhizosphereMDASLYFRLTDRIDGAGSREELAAIEAEIDRTQPHVMERRALERRLNRRELALSTASV*
Ga0070696_10079560213300005546Corn, Switchgrass And Miscanthus RhizosphereKHAMDASLYFRLTDRIDGAASLDELAAIAAEIDHTQPHVMERRALERRVTRRERALATPAR*
Ga0070693_10105352413300005547Corn, Switchgrass And Miscanthus RhizosphereLYFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM*
Ga0070665_10002645433300005548Switchgrass RhizosphereMDASLYFRLTDRIDGAASREELVAIEAEIDRTQPHVMERRALERRLGRRERDLPGAV*
Ga0068854_10017234013300005578Corn RhizosphereMDASLYFGLRDRIDGAASLEELAAIEAEIDSTQPHVMERRALERRVNRRERALSGATM*
Ga0068854_10064112413300005578Corn RhizosphereMDASLYFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALS
Ga0070702_10031376523300005615Corn, Switchgrass And Miscanthus RhizosphereMDASLYFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERVLAVPPM*
Ga0068866_1006329313300005718Miscanthus RhizosphereSIFFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRREQALSGAPM*
Ga0068866_1020846513300005718Miscanthus RhizosphereMDAGLYFRLSDRIDGAASLEELAAIEAEIDRTQPHVIERRALERRLNRRERALSGPPM*
Ga0066903_10495160523300005764Tropical Forest SoilMDASLYFRLRDRIDGAASLEELAAIEAEIDSTEPHVIERRALERRLNRRERALSSPPM*
Ga0068860_10100476513300005843Switchgrass RhizosphereMDASLYFRLTDRIDGAASIEELAAIEAEIERTQPHVVERRALERRLNRRERTLSGVTV*
Ga0082029_104669123300006169Termite NestIAMDASLYFRLRDRIDGAASLEELAALEAEIDSTQPHVIERRALERRVNRRERALASPSM
Ga0070712_10023936133300006175Corn, Switchgrass And Miscanthus RhizosphereMDASVYFRLRDRIDDAASLEELAAIEAEIDSTQPHVMERRALERRVNRREQVLSGLPM*
Ga0068871_10034947823300006358Miscanthus RhizosphereMDARLYFGLRDRIDGAASLEELAAIEAEIDSTQPHVMERRALERRVNRRERALSGATM*
Ga0079222_1120388113300006755Agricultural SoilMDASVFFRLRDRIDGAASLEELAAIEAEIDSTGPHVIERRALERRVNRREQALSGSPV*
Ga0075428_10012707743300006844Populus RhizosphereMDASLYFRLTDRIDGAASLEELAAVAAEIESTQPHVIERRALERRVNRRERALSGA*
Ga0075421_10003646483300006845Populus RhizosphereMDASLYFRLTDRIDGAASLEELAAIVADIERTQPHAIERRALERRMNRRERALEASAAR*
Ga0075421_10014854523300006845Populus RhizosphereMDASLYFRLTDRIDGAASLEELAAVEAEIDGTQPHMIERRALQRRVNRRELALAGATV*
Ga0075421_10016440143300006845Populus RhizosphereMNASLYFRLTDRIDGAASREELAAIEAEIDRTQPHIIERRALERRLNRRERALSEASA*
Ga0075421_10017803413300006845Populus RhizosphereMDASIYFRLTDRIDGAATVEELTVIEAEIERTQPHVMERRALERRLNRRERALSGMG*
Ga0075421_10026571033300006845Populus RhizosphereMDASLYFRLTDRIDGAASLEELAAIEAEIESTQPHMIERRALERRMNRRERALSGAPI*
Ga0075430_10001027043300006846Populus RhizosphereMDASLYFRLTDRIDGAASREELAAIEVEIERTQAHAMERRALERRMDRRERALESRPNI*
Ga0075431_10034222033300006847Populus RhizosphereMDASIYFRLTDRIDGAATVEELTVIEAEIERTQPHVMERRALERRLNRRERALSGTG*
Ga0075420_10173645323300006853Populus RhizosphereMNASLYFRLTDRIDGAASREELAAIEAEIDRTQPHIIERRALERRLNRRERALS
Ga0079217_1032485123300006876Agricultural SoilMDASLYFRLTDRIDGAASREELAAIEAEIERTQAHMMERRALERRMDRRERALDSRPSI*
Ga0068865_10001165643300006881Miscanthus RhizosphereMDASLYFRLRDRIDDAASLEELAAIEAEIDSTEPHVIERRALERRVNRRERALSVPPM*
Ga0079215_1094135423300006894Agricultural SoilMDASIYFRLTDRIDGAASLEELAAIVAEIERTQPHMIERRALERRMNRRESALAGAPV*
Ga0075424_10002791783300006904Populus RhizospherePTSLHPPIAMDASLYFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM*
Ga0079216_1002037733300006918Agricultural SoilMDASQYFRLTDRIDGAASREELAAIEAEIERTQPHVMERRALERRMDRRERALESHPSL*
Ga0097620_10182830013300006931Switchgrass RhizosphereVRRQPKYAMDASIYFRLTDRIDGAGSREELAAIEAEIERTQPHVMERRALERRLNRRELALSGVAV*
Ga0079219_1040826533300006954Agricultural SoilMDASLYFRLTDRIDGAASLEELAAIEAEIERTQPHVIERRALERRLNRRERVLAGVSV*
Ga0075419_1016898733300006969Populus RhizosphereMDASIYFRLTDRIDGAATIEELAVIEAEIERTQPHVMERRALERRLNRRERALSGTG*
Ga0079218_1086921213300007004Agricultural SoilMDASLYFRLTDRIDGAASREELAAIEAEIDRTQPHLMERRALERRLDRRERTLTGSSI*
Ga0079218_1092643313300007004Agricultural SoilFRLTDRIDGAASLEELAAIVAEIERTQPHVMERRALERRMNRRESALSGAQV*
Ga0079218_1149324423300007004Agricultural SoilMNASLYFRLTDRIDGAASREELAAIEAEIDRTQPHIIERRALERRLNRRERALTEPSA*
Ga0105245_1094829223300009098Miscanthus RhizosphereYFRLTDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM*
Ga0114129_1221077923300009147Populus RhizosphereAMDASIYFRLTDRIDGAATVEELTVIEAEIERTQPHVMERRALERRLNRRERALSGTG*
Ga0111538_1014957223300009156Populus RhizosphereMDASIYFRLTDRIDGAATIEELAVIEAEIERTQPHVMERRALERRLNRRELALSGTE*
Ga0105242_1085025923300009176Miscanthus RhizosphereMDASLYFRLTDRIDGAASIEELAAIEAEIERTQPHVMERRALERRLNRRELALVGVAV*
Ga0105238_1166138313300009551Corn RhizosphereMDASLYFRLTDRIDDAASLEELAAIEAEIDSTEPHVIERRALERRVNRRERALSVPPM*
Ga0126307_1002470723300009789Serpentine SoilMDASLYFRLTDRIDGAASAEELSDIEAEIERTQPHVMERRALERRLNRRERALSGAI*
Ga0126307_1135458113300009789Serpentine SoilMDASIYFRLTDRIDGAATIEELAVIEAEIERTQPHVMERRALERRLNRRERAL
Ga0126313_1002590733300009840Serpentine SoilMDASLYFRLTDRIDGAASAEELSDIEAEIERTQPHVMERRALERRLNRRERALSGAL*
Ga0126313_1139879723300009840Serpentine SoilMDASLYFRLTDRIDGAGSREELAAIEAEIDRTQPHVMERRALERRLNRRELALTGSAV*
Ga0105246_1098657933300011119Miscanthus RhizosphereMDASLYFRLTDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNR
Ga0150984_10692176113300012469Avena Fatua RhizosphereMDASLYFRLTDRIDGAGSREELAAIEAEIDRTQPHVMERRALERRLNRR
Ga0150984_11275959523300012469Avena Fatua RhizosphereMDAGIYFRLRDRIDGAASLEELAAIEAEIDSTQPHVIERRALERRLNRRERALSGPPM*
Ga0157334_100746923300012509SoilFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM*
Ga0157290_1024057013300012909SoilMDASIYFRLTDRIDGAATIEELAVIEAEIERTQPHVMGRRALERRLNRRERALSGMV*
Ga0164303_1003339743300012957SoilMDASVFFRLRDRIDDAASLEELAAIEAEIDSTQPHVMERRALERRVNRREQVLSGLPM*
Ga0164301_1004747143300012960SoilMDASVYFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRREQALSGAPM*
Ga0164302_1024500733300012961SoilDASVFFRLRDRIDDAASLEELAAIEAEIDSTPPHVIERRALERRVNRREQALSGAPM*
Ga0164308_1049071723300012985SoilMVASVFFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRREQALSGAPI*
Ga0164304_1059919833300012986SoilMDASIFFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRREQALSGAPI*
Ga0157378_1193366233300013297Miscanthus RhizosphereMDAGLYFRLSDRIDGAASLEELAAIEAEIDRTQPHVIERRALERRLNR
Ga0157372_1267957523300013307Corn RhizosphereMDASLYFRLRDRIDDAASLDELAAIEAEIDTTQPHVMERRALQRRVNRRERALSSPPM*
Ga0157375_1028880143300013308Miscanthus RhizosphereMDASLYFRLRDRIDGAASLEELVAIEAEIDSTQPHVIERRALERRLNRRERALSGPPM*
Ga0157375_1116453613300013308Miscanthus RhizosphereMDAGLYFGLRDRIDGAASLEELAAIEAEIDTTQPHVMERRALERRVNRRERALS
Ga0157376_1269736213300014969Miscanthus RhizosphereSIYFRLTDRIDGAGSREELAAIEAEIERTQPHVMERRALERRLNRRELALSGVAV*
Ga0182007_1010556033300015262RhizosphereMDASLYFRLTDRIDGAASLEELAAIEAEIERTQPHVIERRALERRLDRRERVLSGVSA*
Ga0132258_1034434513300015371Arabidopsis RhizosphereLRPIDMDASLYFRLTDRIDSAASLEELAAIAAEIESTQPHVIERRALERRVNRRERALSAAPI*
Ga0132258_1132697113300015371Arabidopsis RhizosphereMDASLYFRLTDRIDGAASIEELAAIEAEIERTQPHVMERRALERRMSRRERALSGATV*
Ga0132256_10150872813300015372Arabidopsis RhizosphereMDASLYFRLTDRIDGAASLEELAAIAAEIESTQPHVIERRALERRVNRRERALSAAPI*
Ga0132257_10366951213300015373Arabidopsis RhizosphereMDASLYFRLTDRIDGAASVEELATIVAEIDRTQPHVMERRALERRLNRRERALS
Ga0190270_1273256543300018469SoilMDASLYFRLTDRIDGAASVEELATIEAEIDRTQPHVMERRALERRLN
Ga0190274_1007871343300018476SoilMFSRTQIAMDASIYFRLTDRIDGAATIEELAVIEADIERTQPHVMERRALERRLNRRERALSGMG
Ga0190274_1286510623300018476SoilMDASLYFRLTDRIDGAASVEELATIEAEIDRTQPHVMERRALERRLNRRERTLAGVM
Ga0206353_1154338323300020082Corn, Switchgrass And Miscanthus RhizosphereMDASLYFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM
Ga0222622_1031453733300022756Groundwater SedimentMDASIYFRLTDRIDGAGSREELAAIEAEIERTQPHVMERRALERRLNRRELALSGVAV
Ga0207697_1000324813300025315Corn, Switchgrass And Miscanthus RhizospherePTSLHPPIAMDASLYFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM
Ga0207656_1000523743300025321Corn RhizosphereMDASLYFRLRDRIDGAASLEELVAIEAEIDSTQPHVIERRALERRLNRRERALSGPTM
Ga0207656_1012050333300025321Corn RhizosphereMDASLYFRLTDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM
Ga0207656_1032556313300025321Corn RhizosphereMDAGLYFGLRDRIDGAASLEELAAIEAEIDTTQPHVMERRALERRVNRRERALSGATM
Ga0207653_1014115113300025885Corn, Switchgrass And Miscanthus RhizosphereMDASIYFRLTDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM
Ga0207682_1060689913300025893Miscanthus RhizosphereMDASLYFRLTDRIDGAGSREELAAIEAEIDRTQPHVMERRALERRLNRREL
Ga0207705_1131458013300025909Corn RhizosphereYFRLTDRIDGAGSREELAAIEAEIDRTQPHVMERRALERRLNRRELALTTASV
Ga0207654_1130743613300025911Corn RhizosphereRQPTSLHPPIAMDASLYFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALAVPPM
Ga0207693_1018743433300025915Corn, Switchgrass And Miscanthus RhizosphereNPHAIAMDASVYFRLRDRIDDAASLEELAAIEAEIDSTQPHVMERRALERRVNRREQVLSGLPM
Ga0207681_1000786993300025923Switchgrass RhizosphereLHPPIAMDASLYFRLTDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM
Ga0207681_1009430143300025923Switchgrass RhizosphereMDASIYFRLTDRIDGAATIEELAVIEAEIERTQPHVMERRALERRLNRRELALSGTG
Ga0207644_1093533523300025931Switchgrass RhizosphereMDASVFFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRREQALSGAPM
Ga0207669_1029683823300025937Miscanthus RhizosphereMDASIFFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRREQALSGAPM
Ga0207669_1134928123300025937Miscanthus RhizosphereHPDPIAMDAGLYFRLSDRIDGAASLEELAAIEAEIDRTQPHVIERRALERRLNRRERVLSGPPM
Ga0207704_1012263513300025938Miscanthus RhizosphereMDASLYFRLRDRIDDAASLEELAAIEAEIDSTEPHVIERRALERRVNRRERALSVPPM
Ga0207661_1031561713300025944Corn RhizosphereMDASLYFRLTDRIDGAGSREELAAIEAEIDRTQPHVMERRALERRLNRRELALSTASV
Ga0207668_1002123513300025972Switchgrass RhizosphereAAANVLHPPIAMDASLYFRLRDRIDDAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM
Ga0207639_1119823223300026041Corn RhizosphereMDASLYFRLRDRIDDAASLDELAAIEAEIDTTQPHVMERRALQRRVNRRERALSSPPM
Ga0207641_1133310633300026088Switchgrass RhizosphereMDAGLYFGLRDRIDGAASLEELVAIEAEIDSTQPHVIERRALERRLNRR
Ga0207676_1050190043300026095Switchgrass RhizosphereKYAMDASIYFRLTDRIDGAGSREELAAIEAEIERTQPHVMERRALERRLNRRELALSGVA
Ga0209485_108564523300027691Agricultural SoilMDASLYFRLTDRIDGAASREELAAIEAEIERTQAHMMERRALERRMDRRERALDSRPSI
Ga0209485_128367223300027691Agricultural SoilMDASLYFRLTDRIDGAASREELAAIEAEIDRTQPHLMERRALERRLDRRERTLTGSSI
Ga0209481_1041557213300027880Populus RhizosphereMDASLYFRLTDRIDGAASREELAAIEVEIERTQAHAMERRALERRMDRRERALESRPNI
Ga0209486_1022890023300027886Agricultural SoilMDASQYFRLTDRIDGAASREELAAIEAEIERTQPHVMERRALERRMDRRERALESHPSL
Ga0209486_1122860823300027886Agricultural SoilMNASLYFRLTDRIDGAASREELAAIEAEIDRTQPHIIERRALERRLNRRERALTEPSA
Ga0209382_1020540023300027909Populus RhizosphereMNASLYFRLTDRIDGAASREELAAIEAEIDRTQPHIIERRALERRLNRRERALSEASA
Ga0209382_1022047123300027909Populus RhizosphereMDASLYFRLTDRIDGAASLEELAAVAAEIESTQPHVIERRALERRVNRRERALSGA
Ga0209382_1026092833300027909Populus RhizosphereLAVPRDAFPPRTRHVMDASLYFRLTDRIDGAASLEELAAVEAEIDGTQPHMIERRALQRRVNRRELALAGAAV
Ga0209382_1033327933300027909Populus RhizosphereMDASLYFRLTDRIDGAASLEELAAIEAEIESTQPHMIERRALERRMNRRERALSGAPI
Ga0209382_1065729413300027909Populus RhizosphereMDASLYFRLTDRIDGAASLEELAAVEAEIDGTQPHMIERRALQRRVNRRELALAGATV
Ga0209382_1080566023300027909Populus RhizosphereMDASIYFRLTDRIDGAATVEELTVIEAEIERTQPHVMERRALERRLNRRERALSGMG
Ga0268266_1001064433300028379Switchgrass RhizosphereMDASLYFRLTDRIDGAASREELVAIEAEIDRTQPHVMERRALERRLGRRERDLPGAV
Ga0268265_1078833323300028380Switchgrass RhizosphereMDASLYFRLTDRIDGAASIEELAAIEAEIERTQPHMMERRALERRLNRRE
Ga0268264_1176269813300028381Switchgrass RhizosphereIYFRLTDRIDGAATIEELAVIEAEIERTQPHVMERRALERRLNRRELALSGTG
Ga0268264_1214644513300028381Switchgrass RhizosphereMDASLYFRLTDRIDGAASIEELAAIEAEIERTQPHVVERRALERRLNRRERTLSGVTV
Ga0314816_103625623300031481SoilMDASLYFRLTDRIDGAASIEELAAIEAEIERTQPHMIERRALERRMNRRGQALSGVGV
Ga0310888_1002829943300031538SoilMDASLYFRLRDRIDGAASLEELAAIEAEIDSTQPHVIERRALERRVNRRERALSVPPM
Ga0310813_1137624113300031716SoilYFHLTDRIDGAASLEELAAIEAEIDRTQPHMIERRALERRMNRRERALAGVAV
Ga0310813_1164896213300031716SoilFCPPTAMDASLYFRLTDRIDGAASREELAAIEAEIDRTQPHMIERQALERRMNRRERALAGPGI
Ga0307405_1022129333300031731RhizosphereMDASIYFRLTDRIDGAASLEELAAIVAEIERTQPHMIERRALERRMNRRESALSGASV
(restricted) Ga0255338_10000284973300031825Sandy SoilMDASLYFRLTDRIDGAASREELATIQAEIERTQPHVIERRALERRLSRREHALEVGPTA
Ga0307410_1010399833300031852RhizosphereMDASIYFRLTDRIDGAATIEELAVIEAEIERTQPHVMERRALERRLNRRERALAGVA
Ga0308175_10000850223300031938SoilMDASLYFRLRDRIDGAASLEELAAIEAEIDSTQPHVIERRALERRVNRRELALSGATM
Ga0308174_1103330413300031939SoilMDASLYFRLTDRIDGAGSREELAAIEAEIDRTQPHVMERRALERRLNRRELALTTASV
Ga0307416_10041368813300032002RhizosphereMDASLYFRLTDQIDGAASLEELATIVAEIERTQPHMIERRALERRLNRRERTLSRAAV
Ga0307411_1107542923300032005RhizosphereDASLYFRLTDQIDGAASLEELATIVAEIERTQPHMMERRALERRLNRRERTLSGVAV
Ga0307411_1123802723300032005RhizosphereNACQRNRYVMDASIYFRLTDRIDGAASLEELAAIVAEIERTQPHMIERRALERRMNRRESALSGASV
Ga0310899_1033193213300032017SoilSTRKFSRNQTAMDASIYFRLTDRIDGAATIEELAVIEAEIERTQPHVMERRALERRLNRRELALSGTG
Ga0308173_1047956023300032074SoilMDASLYFRLTDRIDGAGSREELAAIEAEIDRTQPHVMERRALERRLNRRELALSGASV
Ga0307415_10167386023300032126RhizosphereTGTFFHEGTTRAMDASLYFRLTDQIDGAASLEELATIVAEIERTQPHMIERRALERRLDRRERTLSGAAV
Ga0310812_1020718333300032421SoilMDASLYFRLRDRIDGAASLEELVAIEAEIDSTQPHVIERRALERRLNRRERAL
Ga0310810_1018846133300033412SoilMDASIYFHLTDRIDGAASLEELAAIEAEIDRTQPHMIERRALERRMNRRERALAGVAV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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