NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F049205

Metagenome / Metatranscriptome Family F049205

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F049205
Family Type Metagenome / Metatranscriptome
Number of Sequences 147
Average Sequence Length 94 residues
Representative Sequence LTEFRTDLFHGLFVWHRAEQGPGTLARHSAAPRAVPDPHTGRPLKVATVELSDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRELVWIAGA
Number of Associated Samples 122
Number of Associated Scaffolds 147

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 33.33 %
% of genes near scaffold ends (potentially truncated) 44.90 %
% of genes from short scaffolds (< 2000 bps) 83.67 %
Associated GOLD sequencing projects 116
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (81.633 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(10.884 % of family members)
Environment Ontology (ENVO) Unclassified
(36.054 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(54.422 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 37.19%    Coil/Unstructured: 62.81%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.144.1.4: Phoshoinositide 3-kinase (PI3K), catalytic domaind1e7ua41e7u0.55633
b.86.1.2: Intein (protein splicing domain)d1dq3a11dq30.5503
b.68.2.1: Soluble quinoprotein glucose dehydrogenased1crua_1cru0.54017
b.69.12.1: Sema domaind6wvzm16wvz0.53972
b.69.8.0: automated matchesd4wjka_4wjk0.53885

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 147 Family Scaffolds
PF02086MethyltransfD12 29.25
PF05697Trigger_N 22.45
PF00535Glycos_transf_2 8.16
PF05698Trigger_C 4.76
PF00574CLP_protease 1.36
PF01966HD 0.68
PF02190LON_substr_bdg 0.68
PF03869Arc 0.68
PF10531SLBB 0.68
PF07498Rho_N 0.68
PF00571CBS 0.68
PF00082Peptidase_S8 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 147 Family Scaffolds
COG0338DNA-adenine methylaseReplication, recombination and repair [L] 29.25
COG3392Adenine-specific DNA methylaseReplication, recombination and repair [L] 29.25
COG0544FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)Posttranslational modification, protein turnover, chaperones [O] 27.21
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 2.72
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 2.72
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 1.36

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms81.63 %
UnclassifiedrootN/A18.37 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459015|G14TP7Y01AP8G6All Organisms → cellular organisms → Bacteria → Acidobacteria710Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105153857All Organisms → cellular organisms → Bacteria → Acidobacteria685Open in IMG/M
3300000956|JGI10216J12902_102408733Not Available1652Open in IMG/M
3300002886|JGI25612J43240_1004265All Organisms → cellular organisms → Bacteria → Acidobacteria1930Open in IMG/M
3300003267|soilL1_10013948All Organisms → cellular organisms → Bacteria4568Open in IMG/M
3300003319|soilL2_10053386All Organisms → cellular organisms → Bacteria2389Open in IMG/M
3300003321|soilH1_10245659All Organisms → cellular organisms → Bacteria2279Open in IMG/M
3300003465|P52013CM_1031517All Organisms → cellular organisms → Bacteria → Acidobacteria1474Open in IMG/M
3300004114|Ga0062593_100953134All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21874Open in IMG/M
3300004153|Ga0063455_101390891All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300004463|Ga0063356_101373483All Organisms → cellular organisms → Bacteria → Acidobacteria1038Open in IMG/M
3300005178|Ga0066688_10331336All Organisms → cellular organisms → Bacteria → Acidobacteria984Open in IMG/M
3300005294|Ga0065705_10014260All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3687Open in IMG/M
3300005331|Ga0070670_100630597All Organisms → cellular organisms → Bacteria961Open in IMG/M
3300005332|Ga0066388_100063985All Organisms → cellular organisms → Bacteria3929Open in IMG/M
3300005333|Ga0070677_10626379Not Available599Open in IMG/M
3300005334|Ga0068869_100612065All Organisms → cellular organisms → Bacteria → Acidobacteria921Open in IMG/M
3300005336|Ga0070680_100397849All Organisms → cellular organisms → Bacteria → Acidobacteria1174Open in IMG/M
3300005336|Ga0070680_100783129Not Available821Open in IMG/M
3300005341|Ga0070691_10059672All Organisms → cellular organisms → Bacteria1833Open in IMG/M
3300005341|Ga0070691_10439794All Organisms → cellular organisms → Bacteria → Acidobacteria743Open in IMG/M
3300005345|Ga0070692_10024002All Organisms → cellular organisms → Bacteria2993Open in IMG/M
3300005355|Ga0070671_100694144All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21883Open in IMG/M
3300005364|Ga0070673_100902147All Organisms → cellular organisms → Bacteria → Acidobacteria820Open in IMG/M
3300005436|Ga0070713_100073611All Organisms → cellular organisms → Bacteria2892Open in IMG/M
3300005438|Ga0070701_10587478Not Available736Open in IMG/M
3300005438|Ga0070701_11048982All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300005440|Ga0070705_100081195Not Available1992Open in IMG/M
3300005440|Ga0070705_100595573All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21854Open in IMG/M
3300005441|Ga0070700_100062324All Organisms → cellular organisms → Bacteria2355Open in IMG/M
3300005444|Ga0070694_100711006All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21818Open in IMG/M
3300005445|Ga0070708_101178455All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21717Open in IMG/M
3300005446|Ga0066686_10245089All Organisms → cellular organisms → Bacteria → Acidobacteria1209Open in IMG/M
3300005451|Ga0066681_10186644All Organisms → cellular organisms → Bacteria → Acidobacteria1236Open in IMG/M
3300005451|Ga0066681_10799274All Organisms → cellular organisms → Bacteria → Acidobacteria569Open in IMG/M
3300005454|Ga0066687_10298370All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21913Open in IMG/M
3300005468|Ga0070707_100251556All Organisms → cellular organisms → Bacteria1720Open in IMG/M
3300005518|Ga0070699_100042048All Organisms → cellular organisms → Bacteria → Acidobacteria3954Open in IMG/M
3300005518|Ga0070699_101272870All Organisms → cellular organisms → Bacteria → Acidobacteria675Open in IMG/M
3300005547|Ga0070693_101535854All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300005549|Ga0070704_100080523All Organisms → cellular organisms → Bacteria → Acidobacteria2396Open in IMG/M
3300005564|Ga0070664_100817835All Organisms → cellular organisms → Bacteria → Acidobacteria872Open in IMG/M
3300005568|Ga0066703_10778273All Organisms → cellular organisms → Bacteria → Acidobacteria548Open in IMG/M
3300005614|Ga0068856_100313301All Organisms → cellular organisms → Bacteria → Acidobacteria1587Open in IMG/M
3300005618|Ga0068864_100168458All Organisms → cellular organisms → Bacteria → Acidobacteria1996Open in IMG/M
3300005843|Ga0068860_100792109All Organisms → cellular organisms → Bacteria → Acidobacteria961Open in IMG/M
3300005843|Ga0068860_101207458Not Available776Open in IMG/M
3300005879|Ga0075295_1048985All Organisms → cellular organisms → Bacteria → Acidobacteria567Open in IMG/M
3300005937|Ga0081455_10144904All Organisms → cellular organisms → Bacteria → Acidobacteria1839Open in IMG/M
3300006046|Ga0066652_100092152All Organisms → cellular organisms → Bacteria2423Open in IMG/M
3300006046|Ga0066652_100145084All Organisms → cellular organisms → Bacteria1983Open in IMG/M
3300006046|Ga0066652_101766450All Organisms → cellular organisms → Bacteria → Acidobacteria561Open in IMG/M
3300006169|Ga0082029_1290892All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300006196|Ga0075422_10040189Not Available1662Open in IMG/M
3300006237|Ga0097621_100818860All Organisms → cellular organisms → Bacteria → Acidobacteria863Open in IMG/M
3300006579|Ga0074054_11828585All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21700Open in IMG/M
3300006605|Ga0074057_11662358All Organisms → cellular organisms → Bacteria → Acidobacteria572Open in IMG/M
3300006755|Ga0079222_10129361Not Available1392Open in IMG/M
3300006796|Ga0066665_10370585All Organisms → cellular organisms → Bacteria → Acidobacteria1174Open in IMG/M
3300006844|Ga0075428_101302638All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21764Open in IMG/M
3300006852|Ga0075433_10184011All Organisms → cellular organisms → Bacteria1859Open in IMG/M
3300006852|Ga0075433_10981170All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21736Open in IMG/M
3300006854|Ga0075425_100391551All Organisms → cellular organisms → Bacteria1601Open in IMG/M
3300006894|Ga0079215_10020635All Organisms → cellular organisms → Bacteria → Acidobacteria2208Open in IMG/M
3300006894|Ga0079215_10210537All Organisms → cellular organisms → Bacteria → Acidobacteria993Open in IMG/M
3300006904|Ga0075424_100155895All Organisms → cellular organisms → Bacteria2420Open in IMG/M
3300006904|Ga0075424_100451173All Organisms → cellular organisms → Bacteria → Acidobacteria1372Open in IMG/M
3300006904|Ga0075424_101321347All Organisms → cellular organisms → Bacteria → Acidobacteria766Open in IMG/M
3300007004|Ga0079218_10080511All Organisms → cellular organisms → Bacteria2160Open in IMG/M
3300009078|Ga0105106_11339633Not Available508Open in IMG/M
3300009553|Ga0105249_10253499All Organisms → cellular organisms → Bacteria → Acidobacteria1746Open in IMG/M
3300009660|Ga0105854_1181832All Organisms → cellular organisms → Bacteria → Acidobacteria691Open in IMG/M
3300010043|Ga0126380_10215754All Organisms → cellular organisms → Bacteria → Acidobacteria1298Open in IMG/M
3300010044|Ga0126310_10632642All Organisms → cellular organisms → Bacteria → Acidobacteria802Open in IMG/M
3300010362|Ga0126377_12648313All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300010399|Ga0134127_10003042All Organisms → cellular organisms → Bacteria12016Open in IMG/M
3300012146|Ga0137322_1003802All Organisms → cellular organisms → Bacteria → Acidobacteria1739Open in IMG/M
3300012199|Ga0137383_10585947All Organisms → cellular organisms → Bacteria → Acidobacteria816Open in IMG/M
3300012200|Ga0137382_10645635All Organisms → cellular organisms → Bacteria → Acidobacteria757Open in IMG/M
3300012200|Ga0137382_11215078All Organisms → cellular organisms → Bacteria → Acidobacteria535Open in IMG/M
3300012203|Ga0137399_10006724All Organisms → cellular organisms → Bacteria6497Open in IMG/M
3300012203|Ga0137399_11692518All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300012209|Ga0137379_10711549Not Available910Open in IMG/M
3300012211|Ga0137377_11004484Not Available765Open in IMG/M
3300012212|Ga0150985_118128584All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21911Open in IMG/M
3300012469|Ga0150984_101671433Not Available608Open in IMG/M
3300012514|Ga0157330_1008064All Organisms → cellular organisms → Bacteria → Acidobacteria971Open in IMG/M
3300012517|Ga0157354_1056633Not Available578Open in IMG/M
3300012922|Ga0137394_11572524All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300012925|Ga0137419_10005332All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis6450Open in IMG/M
3300012925|Ga0137419_10452062All Organisms → cellular organisms → Bacteria → Acidobacteria1012Open in IMG/M
3300012944|Ga0137410_10925263All Organisms → cellular organisms → Bacteria → Acidobacteria739Open in IMG/M
3300014166|Ga0134079_10438211Not Available616Open in IMG/M
3300014325|Ga0163163_10538177Not Available1230Open in IMG/M
3300014326|Ga0157380_12180698All Organisms → cellular organisms → Bacteria → Acidobacteria618Open in IMG/M
3300014969|Ga0157376_10197897Not Available1847Open in IMG/M
3300014969|Ga0157376_10869788All Organisms → cellular organisms → Bacteria → Acidobacteria918Open in IMG/M
3300015371|Ga0132258_11074783All Organisms → cellular organisms → Bacteria → Acidobacteria2034Open in IMG/M
3300015371|Ga0132258_13852909All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_211021Open in IMG/M
3300015372|Ga0132256_100800038All Organisms → cellular organisms → Bacteria → Acidobacteria1059Open in IMG/M
3300015373|Ga0132257_101349110All Organisms → cellular organisms → Bacteria → Acidobacteria906Open in IMG/M
3300015374|Ga0132255_103791770All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300018072|Ga0184635_10373515All Organisms → cellular organisms → Bacteria → Acidobacteria544Open in IMG/M
3300018078|Ga0184612_10607266All Organisms → cellular organisms → Bacteria → Acidobacteria518Open in IMG/M
3300018083|Ga0184628_10009905All Organisms → cellular organisms → Bacteria → Acidobacteria4599Open in IMG/M
3300018432|Ga0190275_10297034Not Available1582Open in IMG/M
3300018466|Ga0190268_11755849All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300018469|Ga0190270_13427350Not Available503Open in IMG/M
3300018476|Ga0190274_12754319Not Available588Open in IMG/M
3300020016|Ga0193696_1051267Not Available1089Open in IMG/M
3300021445|Ga0182009_10746761All Organisms → cellular organisms → Bacteria → Acidobacteria532Open in IMG/M
3300025918|Ga0207662_10173866All Organisms → cellular organisms → Bacteria → Acidobacteria1383Open in IMG/M
3300025926|Ga0207659_11715755Not Available535Open in IMG/M
3300025935|Ga0207709_10200869All Organisms → cellular organisms → Bacteria → Acidobacteria1424Open in IMG/M
3300025942|Ga0207689_11076727All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21678Open in IMG/M
3300025960|Ga0207651_10637718All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21934Open in IMG/M
3300026035|Ga0207703_11660246Not Available615Open in IMG/M
3300026078|Ga0207702_11264903Not Available732Open in IMG/M
3300026095|Ga0207676_10104077All Organisms → cellular organisms → Bacteria → Acidobacteria2360Open in IMG/M
3300026095|Ga0207676_10800888All Organisms → cellular organisms → Bacteria → Acidobacteria919Open in IMG/M
3300026285|Ga0209438_1000269All Organisms → cellular organisms → Bacteria15304Open in IMG/M
3300026542|Ga0209805_1432843All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300027882|Ga0209590_10205541All Organisms → cellular organisms → Bacteria → Acidobacteria1246Open in IMG/M
3300028041|Ga0247719_1004399All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis4837Open in IMG/M
3300028812|Ga0247825_10367268Not Available1013Open in IMG/M
3300031184|Ga0307499_10207166All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300031226|Ga0307497_10081537All Organisms → cellular organisms → Bacteria → Acidobacteria1218Open in IMG/M
3300031229|Ga0299913_11721716All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
(restricted) 3300031248|Ga0255312_1194892All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300031716|Ga0310813_11524765Not Available623Open in IMG/M
3300031720|Ga0307469_10702000All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21917Open in IMG/M
3300031740|Ga0307468_100532868All Organisms → cellular organisms → Bacteria → Acidobacteria941Open in IMG/M
3300031740|Ga0307468_100562074All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21921Open in IMG/M
3300031820|Ga0307473_11047374All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21598Open in IMG/M
3300031995|Ga0307409_100732327Not Available991Open in IMG/M
3300032180|Ga0307471_100030702All Organisms → cellular organisms → Bacteria4136Open in IMG/M
3300032180|Ga0307471_100431839All Organisms → cellular organisms → Bacteria → Acidobacteria1452Open in IMG/M
3300032180|Ga0307471_100602332All Organisms → cellular organisms → Bacteria → Acidobacteria1258Open in IMG/M
3300032180|Ga0307471_100856815All Organisms → cellular organisms → Bacteria → Acidobacteria1076Open in IMG/M
3300032180|Ga0307471_101617868All Organisms → cellular organisms → Bacteria → Acidobacteria803Open in IMG/M
3300032180|Ga0307471_101824793All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21759Open in IMG/M
3300032205|Ga0307472_100236737All Organisms → cellular organisms → Bacteria → Acidobacteria1420Open in IMG/M
3300032421|Ga0310812_10200391Not Available865Open in IMG/M
3300033004|Ga0335084_10057358All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4021Open in IMG/M
3300033433|Ga0326726_10174511All Organisms → cellular organisms → Bacteria → Acidobacteria1972Open in IMG/M
3300034090|Ga0326723_0419571All Organisms → cellular organisms → Bacteria → Acidobacteria609Open in IMG/M
3300034150|Ga0364933_016924All Organisms → cellular organisms → Bacteria → Acidobacteria1728Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.84%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.16%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.48%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil7.48%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.44%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.08%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.72%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.72%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.04%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.04%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil2.04%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.36%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.36%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.36%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.36%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.36%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.36%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.36%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.36%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.68%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.68%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.68%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.68%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.68%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.68%
Ore Pile And Mine Drainage Contaminated SoilEnvironmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.68%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.68%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.68%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.68%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.68%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.68%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.68%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.68%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.68%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.68%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.68%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459015Litter degradation PV4EngineeredOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300003465Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sampleEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005879Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009660Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012146Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT400_2EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012514Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510EnvironmentalOpen in IMG/M
3300012517Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300020016Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028041Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 4-1-E_DEnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M
3300034150Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
4PV_006470102170459015Switchgrass, Maize And Mischanthus LitterMEFRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRPLKVATMEISDRAVCPACAQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA
INPhiseqgaiiFebDRAFT_10515385713300000364SoilLMEFRTDLFHGLFVWQRAGSEPGRLTRHSNAPNAVPDPATGRPLKVASVEISDRAVCPACTQLGGGGYVSFESDLRLAFACPSCRRLVWIAGA*
JGI10216J12902_10240873313300000956SoilMAVLHSAEMDHVDSFFGLFELQSPLHEKPRLASVAAAPRTIPDPQTGRPLKVASVEISERGVCPACTQPGPGGYVSFVADLRLAFACPSCLKLVWIAGA*
JGI25612J43240_100426533300002886Grasslands SoilVTDFHTDLFHGLFILHHADNGPGRLARHAAAPRVVPDPHTGRPLKVATLELSERAVCPACTQLGAGGYVSFESDMRLAFACPSCRKLVWMAGA*
soilL1_1001394863300003267Sugarcane Root And Bulk SoilLTEFRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVATVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA*
soilL2_1005338633300003319Sugarcane Root And Bulk SoilCQFRHFRVQSSLPRLRLMARTELRRRGRLTPNLTEFRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVATVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA*
soilH1_1024565933300003321Sugarcane Root And Bulk SoilHRRGRLTPNLTEFRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVATVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA*
P52013CM_103151723300003465Ore Pile And Mine Drainage Contaminated SoilMDNVLFHGLFELPSSALGAARLRLPARGTAPKSIPCPQTGRPLKVASVELSERSVCPACTQLGAGGYVSFESDLRLAFACPSCKKLVWISGA*
Ga0062593_10095313423300004114SoilMEFRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRPLKVATMEISDRAVCPACAQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA*
Ga0063455_10139089123300004153SoilVLGFPAVESRTDLFHGLFIWHRAETGPGTLARPAAAPRAVPDPNTGRPLKVASVELSDRTVCPACAQLGAGGYVSFESDLRLAFACPTCRKLVWISGA*
Ga0063356_10137348313300004463Arabidopsis Thaliana RhizosphereSRSSHGRLTPNLTEFRTDLFHGLFLWQRAGSEPGRLARHSNAPTAVPDPATGRLLKVATVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRTLVWIAGA*
Ga0066688_1033133613300005178SoilPRTDLFHGLFARHRTGRRSHQSDAPRVVPDPHTGRPLKVDTVELSDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRKLVWIDGA*
Ga0065705_1001426023300005294Switchgrass RhizosphereMEFRTDLFHGLFVLQRAGSEPGRLARHSNAPTAVPDPATGRPLKVATVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRTLVWIAGA*
Ga0070670_10063059723300005331Switchgrass RhizosphereVLASPASMHAQLSDAFHGLFELRTTPHGGRQLASASVRPSTVPDPQTGRPLKIASVEVSESGVCPACTQPGTGGYVSFVADLRLAFACPSCEKLVWIAGA*
Ga0066388_10006398553300005332Tropical Forest SoilMRDLTESRTDLFHGLFVWQRIGGSGPGRLARHENAPGAVPDPTTGHPLKVASVEVTDRGVCPACTQLGAGGYVSFESDLRLAFACPSCRKLVWVAGA*
Ga0070677_1062637913300005333Miscanthus RhizosphereMEFRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRPLKVATMEISDRAVCPACAQLGAGGYVSFESD
Ga0068869_10061206523300005334Miscanthus RhizosphereLTPNLTEFRTDLFHGLFVWQRAGSEPGRLARHSNAPTAVPDPATGRLLKVASVEISDRAVCSACTQLGAGGYVSFESDLRLAFACPSCRTLVWIAGA*
Ga0070680_10039784913300005336Corn RhizosphereVLHQGDNGAGRLTRHAAAPRVVPDPHTGHPLKVAALELSERAVCPACTQLGAGGYVSFESDMRLAFACPSCRKLVWIAGT*
Ga0070680_10078312913300005336Corn RhizosphereMEFRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVASVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSC
Ga0070691_1005967213300005341Corn, Switchgrass And Miscanthus RhizosphereVPDFHTDLFHGLFVLHQGDNGAGRLTRHAAAPRVVPDPHTGHPLKVAALELSERAVCPACTQLGAGGYVSFESDMRLAFACPSCRKLVWIAGT*
Ga0070691_1043979423300005341Corn, Switchgrass And Miscanthus RhizosphereLTEFRTDLFHGLFVWHRAEQGPGTLARHSAAPRVVPDPHTGRPLKVATVELSDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRELVWIAGA*
Ga0070692_1002400243300005345Corn, Switchgrass And Miscanthus RhizosphereVWHRAEQGPGTLARHSAAPRVVPDPHTGRPLKVATVELSDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRELVWIAGA*
Ga0070671_10069414413300005355Switchgrass RhizosphereMPLKSHVERPSAASRDRRGRLTPDLTESRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVASVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA*
Ga0070673_10090214713300005364Switchgrass RhizosphereLTESRTDLFHGLFVWQRAGSEPGRLTRHSNAPTAVPDPATGRPLKVASVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA*
Ga0070713_10007361133300005436Corn, Switchgrass And Miscanthus RhizosphereMLVSAHLSESRTDLFHGLFVWHRGEKGHGRLAASAAAPRMIPDPQTGHPLKVASVEVSDRAVCPACTELGGGGYVSFESDLRLAFACPCCRKLVWIAGA*
Ga0070701_1058747833300005438Corn, Switchgrass And Miscanthus RhizosphereLETRTDLFHGLFIWQSNDNGAGTLVRHKSAPRNVPDPQTGRPLKVAAVDLSDRAVCPACTQLGAGAYVSFEADLRLAFACPTCRKL
Ga0070701_1104898223300005438Corn, Switchgrass And Miscanthus RhizosphereGRLTPNLTEFRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVASVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA*
Ga0070705_10008119523300005440Corn, Switchgrass And Miscanthus RhizosphereVTDFRTDLFHGLFVLHRGDQGQGRLSRHAAAPRVVPDPHTGHPLKVAALELSELTVCPACAQLGAGGYVSFESDMRLAFACPQCRKLVWIASA*
Ga0070705_10059557323300005440Corn, Switchgrass And Miscanthus RhizosphereVCQFRHFRVDAAYHALCYASPALETRTDLFHGLFIWQRGEKGPGTLLRHSSAPRIVPDPQTGRPLKVAAVEISERAVCPACTQLGAGAYVSFEADLRLAFACPTCRKLVWIAGA*
Ga0070700_10006232433300005441Corn, Switchgrass And Miscanthus RhizosphereTEFRTDLFHGLFVWQRAGSEPGRLTRHSNAPNAVPDPATGRLLKVASVEISDRAVCPACTQLGGGGYVSFESDLRLAFACPSCRRFVWIAGA*
Ga0070694_10071100613300005444Corn, Switchgrass And Miscanthus RhizosphereAEQGPGTLARHSAAPRVVPDPHTGRPLKVATVELSDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRELVWIAGA*
Ga0070708_10117845513300005445Corn, Switchgrass And Miscanthus RhizosphereMESRTDLFHGLFILNRTEKGSDTLARPSAAPRMVPDPQTGRPLRVATVELSDRAVCPACTQSGAGGYVSFESDLRLAFACPSCRQLIWIAGA*
Ga0066686_1024508923300005446SoilLFHGLFVWHRAEKGPGKLARHSDAPRVVPDPNTGRPLKVASLELSDRAVCPACTQLGTGGYVSFESDLRLAFACPSCRKLVWIAGA*
Ga0066681_1018664413300005451SoilLNEPRTDLFHGLFALHRTGKLSRHAEAPREVPDPNTGRPLKVATVELSDRAVCPACTQLGTGGYVSFESDLRLAFACPSCRKLVWIAGA*
Ga0066681_1079927413300005451SoilMQPNMLGYLALSESRTDLFHGLFVWHRAETGPGRLARHSDAPRAVPDPTTGRPLKVATLELSDRAVCPACTQLGAGGYVSFEGDLRLAFACPTCRKLVWM
Ga0066687_1029837023300005454SoilLNEPRTDLFHGLFALHRTGRLSHHSDAPRVVPDPNTGRPLKVDTVELSDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRKLVWIDGA*
Ga0070707_10025155613300005468Corn, Switchgrass And Miscanthus RhizosphereLFVLHRGDQGQGRLSRHAAAPRVVPDPHTGHPLKVAALELSERTVCPACAQLGAGGYVSFESDMRLAFACPQCRKLVWIASA*
Ga0070699_10004204823300005518Corn, Switchgrass And Miscanthus RhizosphereVTDFRTDLFHGLFVLHRGDQGQGRLSRHAAAPRVVPDPHTGHPLKVAALELSERTVCPACAQLGAGGYVSFESDMRLAFACPQCRKLVWIASA*
Ga0070699_10127287023300005518Corn, Switchgrass And Miscanthus RhizosphereLTESRTDLFHGLFVWHRAEMGPGKLARYSDAPRVVPDPNTGRPLKVASLELSDRAVCPACTQLGTGGYVSFEADLRLAFACPSCRKLVWIAGA*
Ga0070693_10153585413300005547Corn, Switchgrass And Miscanthus RhizosphereVQPAHARRGRLTPNLTEFRTDLFHGLFVWQRAGSEPGRLTRHSNAPNAVPDPATGRLLKVASVEISDRAVCPACTQLGGGGYVSFESDLRLAFACPSCRRFVWIAGA*
Ga0070704_10008052333300005549Corn, Switchgrass And Miscanthus RhizosphereMTNRPITDLFHGLFEWHPQPQGNGRLTSNATRPTAIPDPQTGRPLRVATVELSDRGVCPACTQLGAGGYVSFVADLRLAFACPSCRKLVWLAGS*
Ga0070664_10081783523300005564Corn RhizosphereLETRTDLFHGLFIWQSNDNGAGTLVRHKSAPRNVPDPQTGRPLKVAAVDLSERAVCPACTQLGAGAYVSFEADLRLAFACPTCRKLVWIAGA*
Ga0066703_1077827313300005568SoilLNEPRTDLFHGLFALHRTGRLSHHSDAPRVVPDPNTGRPLKVDTVELSDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRKLVWI
Ga0068856_10031330123300005614Corn RhizosphereMRLKSHVERRSAGARYRHGRLTPNLTESRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVASTEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA*
Ga0068864_10016845833300005618Switchgrass RhizosphereMRLKSHVERRSAGARYRHGRLTPNLTESRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVASTEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRTLVWIAGA*
Ga0068860_10079210913300005843Switchgrass RhizosphereGRLTPNLTESRTDLFHGLFVWQRAGSEPGRLTRHSNAPTAVPDPATGRPLKVASVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA*
Ga0068860_10120745813300005843Switchgrass RhizosphereLTEFRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVASVEISDRAVCPACAQLGAGGYVSF
Ga0075295_104898523300005879Rice Paddy SoilRSTVVLRFSAVESRTDLFHGLFIWHRAEKGTGTLARHAAAPRAVPDPNTGRPLKVASVELSDRAVCSACAQLGAGGYVSFESDLRLAFACPTCRKLVWISGA*
Ga0081455_1014490433300005937Tabebuia Heterophylla RhizosphereLTEFRTDLFHGLFVWQRAGSEPGRLARHSNAPTAVPDPATGRLLKVASVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRTLVWMAGA*
Ga0066652_10009215223300006046SoilMQPNMLGYLALSESRTDLFHGLFVWHRTDKGPGRLARHSDAPRAVPDPATGRPLKIAALELSDRAVCPACTQLGAGGYVSFEGDLRLAFACPTCRKLVWMAGA*
Ga0066652_10014508433300006046SoilMESRTDLFHGLFVLNGGGKGPDTLARHAAAPRTVPDPETGRMLKVASLELSDRAVCPACTQSGAGGYISFESDLRLAFACPSCRQLVWVAGA*
Ga0066652_10176645023300006046SoilLNEPRTDLFHGLFALHGTGRLSHHSDAPRVVPDPNTGRPLKVATVELSDRAVCPACTQLGTGGYVSFESDLRLAFACPSCRTLVWIAGA*
Ga0082029_129089223300006169Termite NestMDTPTADLFFGLFELRKTATGQARLTTPPAVPTSVPDPQTGRPLKIAAVELSDRSVCPACTQLGTGGYVSFVADLRLAFACPSCRQLVWVDA*
Ga0075422_1004018933300006196Populus RhizosphereLTEFRTDLFHGLFVWQRAGSEPGRLARHSNAPTAVPDPATGRLLKVASVEISDRAVCPACTQLGTGGYVSFESDLRLAFACPSCR
Ga0097621_10081886023300006237Miscanthus RhizosphereMAQASGPLRPTPKGLVQRSLARRGRLAPNLTEFRTDLFHGLFVWQRAGSEPGRLTRHSNAPNAVPDPATGRLLKVASVEISDRAVCPACTQLGGGGYVSFESDLRLAFACPSCRRFVWIAGA*
Ga0074054_1182858513300006579SoilSGASASSATFASMQPNMLGYLALSESRTDLFHGLFVWHRADEGPGRLARHSDAPRAVPDPTTGRPLKVAALELSDRAVCPACTQLGAGGYVSFEGDLRLALACPTCRKLVWMAGA*
Ga0074057_1166235823300006605SoilPDPKSGASASSATFASMQPNMLGYLALSESRTDLFHGLFVWHRADEGPGRLARHSDAPRAVPDPTTGRPLKVAALELSDRAVCPACTQLGAGGYVSFEADLRLAFACPTCRKLVWMAGA*
Ga0079222_1012936123300006755Agricultural SoilMEFRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVASVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA*
Ga0066665_1037058533300006796SoilGLTESRTDRFHGLFVWHRAEKGPGKLARRSDAPRAVPDPNTGRPLKVATLELSERAVCPACAQLGGGGYVSFESDLRLAFACPSCRKLVWIAGA*
Ga0075428_10130263813300006844Populus RhizosphereTDLFHGLFVWQRAGSEPGRLARHSNAPTAVPDPATGRLLKVASVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRTLVWIAGA*
Ga0075433_1018401113300006852Populus RhizosphereMDPRIDLFHGLFVFHPASKGPGTLARHSAAPGMVPDPQTGRLLKVASVELSDRAVCPACTQSGAGGYVSFESDLRLAFACPSCRQLVWVAGA*
Ga0075433_1098117013300006852Populus RhizosphereRGDEGAGTLARHSDAPRVVPDPHTGRPLKVASVELSNRAVCPACTQLGVGGYVSFESDLRLAFACPSCRKLVWIAGA*
Ga0075425_10039155113300006854Populus RhizosphereFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVASVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA*
Ga0079215_1002063533300006894Agricultural SoilMTTRPVTDLFHGLFEWHPQPQGAGRLASNATRPSAIPDPQTGRPLRVASVELSDRGVCPACTQLGAGGYVTFGSDLRLAFACPSCRKLVWIAGA*
Ga0079215_1021053723300006894Agricultural SoilMTTRPVTDLFHGLFEWHPQPHGKGRLASNAARPEAIPDPQTGRPLRVAAVELSDRGVCPACTQLGAGGYVTFVADLRLAFACPSCRKLVWIAGA*
Ga0075424_10015589543300006904Populus RhizosphereRAGSEPGRLTRHLNAPTAVPDPATGRPLKVASVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA*
Ga0075424_10045117323300006904Populus RhizosphereFVLHRGDQGQGRLSRHAAAPRVVPDPHTGHPLKVAALELSERTVCPACAQLGAGGYVSFESDMRLAFACPQCRKLVWIASA*
Ga0075424_10132134713300006904Populus RhizosphereVTDFRTDLFHGLFVLHRGDQGQGRLSRHAAAPRVVPDPHTGHPLKVAALELSERTVCPACAQLGAGGYVSFESDMRLAFACPQCRKLVWI
Ga0079218_1008051113300007004Agricultural SoilELRTPEQGRARLASSASAPRSIPDPQTGRPLKVASVELSDRGICPSCTQLGAGGYVSFVSDMRLAFACPSCQKLVWIAGA*
Ga0105106_1133963323300009078Freshwater SedimentMTDAFFGLFEIEERRLIVTKPAGAAIPRTVPCPETGRPLRVASVEVSDRGVCPACAQLGAGGYVSFVADLRLAFACPSCSKLVWLAGL*
Ga0105249_1025349913300009553Switchgrass RhizosphereLTEFRTDLFHGLFVWQCAGSEPGRLARHSNAPTAVPDPATGRLLKVASVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRRFVWIAGA*
Ga0105854_118183233300009660Permafrost SoilLTDFRIDLFHGLFEWHRAGAGPARLATRSAAPRAVPDPQTGLPVRVASLELSDRAVCPACTQLGAGGYVLFESDLRLAFACPSCRQLVW
Ga0126380_1021575413300010043Tropical Forest SoilLTEFRTDLFHGLFVWQRAGSEPGRLTRHSNAPNAVPDPATGRPLKVATVEISERAVCPACTQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA*
Ga0126310_1063264233300010044Serpentine SoilLAEFRTDLFHGLFVWQRADKGPGWLTRHSAAPRAVPDPTTGRPLKIANLELSDRAVCPACTELGAGGYVSFEADLRLAFACPSCRKLVWIAGA*
Ga0126377_1264831323300010362Tropical Forest SoilLAESSTDFVDGLFEWHALLKGPARVTPRSAAPAQVPDPVTGRLLKVATVEISERAVCPACTQLGRGGYVTFESDLRLAFACPSCRQLVWITGA*
Ga0134127_1000304283300010399Terrestrial SoilVPDFHTDLFHGLFVLHQGDNGAGRLTRHSAAPRVVPDPHTGHPLKVAALELSERAVCPACTQLGAGGYVSFESDMRLAFACPSCRKLVWIAGT*
Ga0137322_100380223300012146SoilMTSRPVTDLFHGLFEWHPQPHGRARLASSASPPRAIPDPHTGRPLRVATLELSDRGVCPACTQLGAGGYVSFVADLRLAFACPSCRKLVWIAGA*
Ga0137383_1058594733300012199Vadose Zone SoilMLGYPALSESRTDLFHGLFVWHRAEKGPGRLARHSDAPRAVPDPTTGRPLRVATLELSDRGVCPACTQLGAGGYVSFEGDLRLAFACPTCRKLVWMAGA*
Ga0137382_1064563513300012200Vadose Zone SoilLTDFRTDLFHGLFEWHRPAKGPARLATRSAAPREVPDPQTGRPLKVASLEVSDRAVCPACTQFGGGGYVSFESDLRLAFACPSCRTLVWIAGA*
Ga0137382_1121507823300012200Vadose Zone SoilSRTDLFHGLFVWHRAEKGPGKLARHSDAPQAVPDPTTGRPLKIAALELSDRAVCPACTQLGTGGYVSFEGDLRLAFACPTCRKLVWMAGA*
Ga0137399_1000672473300012203Vadose Zone SoilVTDFHTDLFHGLFVLHHADNGPARLARHAAAPRVVPDPHTGHPLKVASLELSERTVCPACAQLGAGGYVSFESDMRLAFACPSCRKLVWIAGA*
Ga0137399_1169251823300012203Vadose Zone SoilLHGADPGPGRLARSSDAPRVVPDPNTGRPLRIASVELSDRAVCPACTQLGEGGYVSFESDLRLAFACPSCRKLVWIAGA*
Ga0137379_1071154923300012209Vadose Zone SoilMLGYLALSESRTDLFHGLFVWHRAERGPGRLARHSDAPRAVPDPTTGRPLKVATLELSDRAVCPACTQLGAGGYVSF
Ga0137377_1100448413300012211Vadose Zone SoilLNEPRTDLFHGLFALHRTGKLSRHAEAPREVPDPNTGRPLKVATVELSDRAVCPACTQLGTGGYVSFESDLRLAFACPS
Ga0150985_11812858423300012212Avena Fatua RhizosphereMNTPSTDLFFGLFELRVTGHGQPRLMSRSAAPASVPDPQTGRPLKVAAVELSERSVCPACTQLGAGGYVSFVADLRLAFACPSCLKLVWIAGA*
Ga0150984_10167143313300012469Avena Fatua RhizosphereTDLFFGLFELRVTGHGQPRLMSRSAAPASVPDPQTGRPLKVAAVELSERSVCPACTQLGAGGYVSFVADLRLAFACPSCLKLVWIAGA*
Ga0157330_100806433300012514SoilLTEFRTDLFHGLFVWQRAGSEPGRLTRHSNAPNAVPDPATGRLLKVASVEISDRAVCPACTQLGGGGYVSFESDLRLAFACPSCRRLVWIAGA*
Ga0157354_105663313300012517Unplanted SoilLTEFRTDLFHGLFVWQRAGSEPGRLTRHSNAPNAVPDPATGRLLKVASVEISDRAVCPACTQLGGGGYVSFV
Ga0137394_1157252413300012922Vadose Zone SoilLTEFRTDLFHGLFVWHRAEHGPGTLARHSAAPRVVPDPHTGRPLKVATVELSDRAVCPACTQLGAGGYVSFESDLRLAFACPSCREFVWIAGA*
Ga0137419_1000533233300012925Vadose Zone SoilVTDFHTDLFHGLFVLHHADNGPARLARHTAAPRVVPDPHTGHPLKVASLELSERTVCPACAQLGAGGYVSFESDMRLAFACPSCRKLVWIAGA*
Ga0137419_1045206233300012925Vadose Zone SoilLTDFRTDLFHGLFEWHRPGTGPAHLVTRSAAPREVPDPQTGRPLKVETVEISERAVCPACTQFGGGGYVSFEADLRLAFACPSCRKLVWIAGA*
Ga0137410_1092526313300012944Vadose Zone SoilLTDVRTDLFHGLFVLHGADPGPGRLARPSDAPRVVPDPNTGRPLRIASVELSDRAVCPACTQLGEGGYVSFESDLRLAFACPSCRKLVWIAGA*
Ga0134079_1043821113300014166Grasslands SoilMQPNMLGYLALSESRTDLFHGLFVWHRAEKGPGRLACHSDAPRVVPDPTTGRPLKVATLELSDRAVCPACTQLGAGGYVSFEGD
Ga0163163_1053817723300014325Switchgrass RhizosphereMHAQLSDAFHGLFELRTTPHGGRQLASASVRPSTVPDPQTGRPLKIASVEVSESGVCPACTQPGTGGYVSFVADLRLAFACPSCEKLVWIAGA*
Ga0157380_1218069813300014326Switchgrass RhizosphereMDHVDSFFGLFELQHHLPDKPRLASVRSRPRSIPDPHTGRPLTVASVEISERGVCPACTQLGAGGYVSFVADLRLAFACPSCQKLVWIAGA*
Ga0157376_1019789723300014969Miscanthus RhizosphereMNTPTADLFCGLFELRTTGHGQPRLTSRPAAPASVPDPQTGRPLKVAAVELSERTVCPECTQLGAGGYVSFVADLRLAFACPSCLKLVWVAGA*
Ga0157376_1086978813300014969Miscanthus RhizosphereLTELKTDFFHGLFDWHQSTHGPARLTRRGSTPREVPDPETGRPLKVATVEVSDRAVCPACTQLGDGAYVSFESDLRLAFACPSCRKLVWIAGA*
Ga0132258_1107478313300015371Arabidopsis RhizosphereVNDTSTDLFHGLFVWRDASPGRATLARHSNPPRAVPDPLTGRPLKVASVEVSDRAVCPACTELGAGGYVSFEADLRLAFACPSCRKLVWIAGA*
Ga0132258_1385290923300015371Arabidopsis RhizosphereLTEFRTDLFHGLFVWHRAEQGPGTLARHSAAPRAVPDPHTGRPLKVATVELSDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRELVWIAGA*
Ga0132256_10080003813300015372Arabidopsis RhizosphereLTESRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVASVEISDRAVCPSCTQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA*
Ga0132257_10134911013300015373Arabidopsis RhizosphereLTEFRTDLFHGLFILQRGGSEPGRLARHSNAPTAVPDPATGRLLKVPTVEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRTLVWIAGA*
Ga0132255_10379177023300015374Arabidopsis RhizosphereLTEFRTDLFHGLFVWHRAEQGPGTLARHSAAPRAVPDPHTGRPLKVATVELSDRAVCPACTQLGAGGYVSFESDLRLAFACPSCREFVWIAGA*
Ga0184635_1037351523300018072Groundwater SedimentLGYPALSESRTDLFHGLFVWHRADEGPGRLARHSDAPRAVPDPNTGRPLKVAALELSDRAVCPACTQLGAGGYVSFEGDLRLAFACPTCRKLVWMAGA
Ga0184612_1060726623300018078Groundwater SedimentLTDFRTDLFHGLFEWHRPPGGPARLTNQSAAPREVPDPQTGRPLKVASLEVSDRAVCPACTQFGGGGYVSFESDLRLAFACPGCRKLVWIAGA
Ga0184628_1000990563300018083Groundwater SedimentMQPNMLGYPALSESRTDLFHGLFVWHRADEGPGRLARHSDAPRAVPDPNTGRPLKVAALELSDRAVCPACTQLGAGGYVSFEGDLRLAFACPTCRKLVWMAGA
Ga0190275_1029703433300018432SoilMDSTRADLFHGLFELVPGSHGRGRLASRASAPRTIPDPQTGRPVQIASIELSDRGVCPACAQLGAGGYVSFVADLRLAFACPDCCKLTWIAGT
Ga0190268_1175584913300018466SoilCGPSMTNRPITDLFHGLFEWHPHPQGTGRLASNAARPAAIPDPQTGRPLRVATVELSDRGVCPACTQLGAGGYVSFVADLRLAFACPRCRKLVWLAGS
Ga0190270_1342735023300018469SoilFHGLFELVPGSHGRGRLASRAAAPRTIPDPQTGRPVQIASIELSDRGVCPACAQLGAGGYVSFVADLRLAFACPDCCKLIWIAGT
Ga0190274_1275431923300018476SoilMTNRPITDLFHGLFEWHPQAHGTGRLASNATRPAAIPDPQTGRPLRVATVELSDRGVCPACTQLGSGGYVSFEADMRLAFACPSCEKLVWFAGA
Ga0193696_105126733300020016SoilLTEFRTDLFHGLFVWHCGEQGPGTLARHSDAPRAVPDPHTGRPLKVASVELSDRAVCPACAQLGAGGYVSFESDLRLAFAC
Ga0182009_1074676113300021445SoilGASANSATFAFKSSLPRPAMRLKSHVERRSAGARYRHGRLTPNLTESRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVASTEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRTLVWIAGA
Ga0207662_1017386613300025918Switchgrass RhizosphereVRDQGQSRRLRFRLYATVQPALARRGRLTPDLTEFRTDLFHGLFVWQRAGSEPGRLTRHSNAPNAVPDPATGRLLKVASVEISDRAVCPACTQLGGGGYVSFESDLRLAFACPSCRRFVWIAGA
Ga0207659_1171575513300025926Miscanthus RhizosphereVDPADSFYGLFELHHHLHDKPTLASARTRPRTIPDPQTGRPLAVASVEISERGVCPACTQLGAGGYVSFVADLRLAFACPSCLKLVWMAGL
Ga0207709_1020086923300025935Miscanthus RhizosphereVPDFHTDLFHGLFVLHQGDNGAGRLTRHAAAPRVVPDPHTGHPLKVAALELSERAVCPACTQLGAGGYVSFESDMRLAFACPSCRKLVWIAGT
Ga0207689_1107672713300025942Miscanthus RhizospherePAHARRGRLTPNLTEFRTDLFHGLFVWQRAGSEPGRLTRHSNAPNAVPDPATGRLLKVASVEISDRAVCPACTQLGGGGYVSFESDLRLAFACPSCRRFVWIAGA
Ga0207651_1063771823300025960Switchgrass RhizosphereMRLKSHVERRSAGARYRHGRLTPNLTESRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVASTEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRTLVWIAGA
Ga0207703_1166024623300026035Switchgrass RhizosphereVLASPASMHAQLSDAFHGLFELRTTPHGGRQLASASVRPSTVPDPQTGRPLKIASVEVSESGVCPACTQPGTGGYVSFVADLRLAFACPSCEKLVWIAGA
Ga0207702_1126490333300026078Corn RhizosphereMRLKSHVERRSAGARYRHGRLTPNLTESRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVASTEISDRAVCPACTQLGAGGYVSFESDL
Ga0207676_1010407713300026095Switchgrass RhizosphereRHGRLTPSLTESRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRLLKVASTEISDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRTLVWIAGA
Ga0207676_1080088823300026095Switchgrass RhizosphereGRLTPHLMEFRTDLFHGLFVWQRAGSEPGRLARHSNAPNAVPDPATGRPLKVATMEISDRAVCPACAQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA
Ga0209438_100026973300026285Grasslands SoilVTDFHTDLFHGLFILHHADNGPGRLARHAAAPRVVPDPHTGRPLKVATLELSERAVCPACTQLGAGGYVSFESDMRLAFACPSCRKLVWMAGA
Ga0209805_143284323300026542SoilLNEPRTDLFHGLFALHRTGRLSHHSDAPRVVPDPNTGRPLKVDTVELSDRAVCPACTQLGAGGYVSFESDLRLAFACPSCRKLVWIDGA
Ga0209590_1020554123300027882Vadose Zone SoilVWHRAEMGPGKLARHSDAPRVVPDPNTGRPLKVASLELSDRAVCPACTQLGTGGYVSFESDLRLAFACPSCRKLVWIAGA
Ga0247719_100439963300028041SoilMNNLPRTDLFHGLFELSGPQIVPAATAPTTIPCPQTGRPLKVATVELSDRTVCPACTQLGAGGYVSFVADLRLAFACPSCRKLVWVAGA
Ga0247825_1036726813300028812SoilMDIASSTALFHGLFELRTPEQGRARLASSASAPRSIPDPQTGRPLKVASVELSDRGICPSCTQLGAGGYVSFVSDMRLAFACPSCQKLVWIAGA
Ga0307499_1020716623300031184SoilIRAMWAAPKSGASASSATFASMQPNMLGYVALSESRTDLFHGLFVWHRADTGPGKLARHSDAPRAVPDPTTGRPLKVAALELSDRAVCPACTQLGAGGYVSFEGDLRLAFACPACRKLVWMAGA
Ga0307497_1008153723300031226SoilMQPNMLGYVALSESRTDLFHGLFVWHRADTGPGKLARHSDAPRAVPDPTTGRPLKVAALELSDRAVCPACTQLGAGGYVSFEGDLRLAFACPACRKLVWMAGA
Ga0299913_1172171613300031229SoilVTDLFHGLFEWHPQPHGKGRLASNAARPEAIPDPQTGRPLRVAAVELSDRGVCPACTQLGAGGYVTFVADLRLAFACPSCRKLVWIAGA
(restricted) Ga0255312_119489223300031248Sandy SoilMQPNMLGYPALSESRTDLFHGLFVWHRADAGPGRLARHSDAPRAVPDPATGRPLKVAALELSDRAVCPARTQLGAGGYVSFEGDLRLAFACPTCRKL
Ga0310813_1152476513300031716SoilMNPSQRSDSFHGLFELRTTTHGRRQLASRPAPPRTVPDPHTGRPLKVASVEVSDRGVCPACSQLGAGGYVSFVADLRLAFACPSCE
Ga0307469_1070200013300031720Hardwood Forest SoilARMPHVVTDFRTDLFHGLFVWHRGDEGAGTLARHSDAPRVVPDPNTGRPLKVASVELSERAVCPACTQLGVGGYVSFESDLRLAFACPSCRKLVWIAGA
Ga0307468_10053286833300031740Hardwood Forest SoilMPHVVTDFRTDLFHGLFVWHRGDEGAGTLARHSDAPRVVPDPNTGRPLKVASVELSDRAVCPACTQLGVGGYVSFESDLRLAFACPSCRQLVWIAGA
Ga0307468_10056207413300031740Hardwood Forest SoilMPHVVADFRTDLFHGLFVWHRGDEGAGTLARHSDAPRVVPDPNTGRPLKVASVELSERAVCPACTQLGVGGYVSFESDLRLAFACPSCRKLVWIAGA
Ga0307473_1104737423300031820Hardwood Forest SoilVWQRAGSEPGRLTRHSNAPNAVPDPATGRPLKVASVEISDRAVCPACAQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA
Ga0307409_10073232723300031995RhizosphereMDRPSRSDIFHGLFVLRARDAGGVRLESNAAAPATIPDPETGRPLKIASVELSDRGICPSCTQLGTGGYVSFVADMRLAFACPSCLTLVWVAGA
Ga0307471_10003070243300032180Hardwood Forest SoilMPHVVTDFRTDLFHGLFVWHGGDEGAGTLARHSDAPRVVPDPNTGRPLKVASVELSDRAVCPACTQLGVGGYVSFESDLRLAFACPSCRQLVWIAGA
Ga0307471_10043183933300032180Hardwood Forest SoilMPHDVTDFRTDLFHGLFVWHPGHEGAGTLARHSDAPRVVPDPNTGRPLKVASVELSERAVCPACTQLGVGGYVSFESDLRLAFACPSCRKLVWIAGA
Ga0307471_10060233213300032180Hardwood Forest SoilRPTLNDFRTDLFHGLFEWHRSPGGPARVTNRSAAPREVPDPQTGRPLKVASLEVSDRAVCPACTQLGGGGYVSFESDLRLAIACPGCRKLVWIAGA
Ga0307471_10085681523300032180Hardwood Forest SoilPTMGKAVVGYLGLNEPRTDLFHGLFALHRTGRLSHHAEAPRVVPDPNTGRPLKVATVELSDRAVCPACTQLGTGGYVSFESDLRLAFACPSCRKLVWIAGA
Ga0307471_10161786813300032180Hardwood Forest SoilVTDFHTDLFHGLFVLHHVDNGPGRLARHAAAPRVVPDPHTGHPLKVAALELSERTVCPACAQLGAGGYVSFESDMRLAFACPSCRKLVWMAGS
Ga0307471_10182479323300032180Hardwood Forest SoilSASPPDGRGRLTPNLMEFRTDQFHGLFVWQRAGSEPGRLTRHSNAPNAVPDPATGRPLKVASVEISDRAVCPACAQLGAGGYVSFESDLRLAFACPSCRRLVWIAGA
Ga0307472_10023673723300032205Hardwood Forest SoilVWHRGDEGAGTLARHSDAPRVVPDPNTGRPLKVASVELSDRAVCPACTQLGVGGYVSFESDLRLAFACPSCRQLVWIAGA
Ga0310812_1020039113300032421SoilWQRGEKGPGTLLRHSSAPRIVPDPQTGRPLKVAAVEISERAVCPACTQLGAGAYVSFEADLRLAFACPTCRKLVWIAGA
Ga0335084_1005735813300033004SoilFVWHHADEGAGRLAASSPTPRMIPDPQTGRPLKVASVEVSDRAVCPACTQLGAGGYVSFEADLRLAFACPSCRKLVWVAGA
Ga0326726_1017451133300033433Peat SoilMQPNMLGYLALSESRTDLFHGLFVWHGAEKGPGRLARHSDAPQAVPDPTTGRPLKVATLELSDRAVCPACTQLGAGGYVSFEGDLRLAFACPTCRKLVWMAGA
Ga0326723_0419571_142_4413300034090Peat SoilMLGYLALSESRTDLFHGLFVWHRAEKGPGRLARHSDAPQAVPDPTTGRPLKVATLELSDRAVCPACTQLGAGGYVSFEGDLRLAFACPTCRKLVWMAGA
Ga0364933_016924_1318_16173300034150SedimentMLGYPALSESRTDLFHGLFVWHRADEGPGRLARHSDAPRAVPDPNTGRPLKVAALELSDRAVCPACTQLGAGGYVSFEGDLRLAFACPTCRKLVWMAGA

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