Metagenome / Metatranscriptome Family F049149

Basic Information
Family ID	F049149
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	46 residues
Representative Sequence	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVELG
Number of Associated Samples	133
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.32 %
% of genes from short scaffolds (< 2000 bps)	92.52 %
Associated GOLD sequencing projects	124
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (63.265 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.252 % of family members)
Environment Ontology (ENVO)	Unclassified (29.252 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.259 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.22% β-sheet: 0.00% Coil/Unstructured: 37.78%
Feature Viewer

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Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF13561	adh_short_C2	5.44
PF13459	Fer4_15	2.04
PF00296	Bac_luciferase	2.04
PF00085	Thioredoxin	2.04
PF00501	AMP-binding	1.36
PF03551	PadR	1.36
PF10094	DUF2332	1.36
PF08044	DUF1707	1.36
PF07883	Cupin_2	1.36
PF12697	Abhydrolase_6	1.36
PF10431	ClpB_D2-small	1.36
PF07992	Pyr_redox_2	0.68
PF13302	Acetyltransf_3	0.68
PF13401	AAA_22	0.68
PF00378	ECH_1	0.68
PF00005	ABC_tran	0.68
PF00528	BPD_transp_1	0.68
PF12804	NTP_transf_3	0.68
PF00809	Pterin_bind	0.68
PF13271	DUF4062	0.68
PF03070	TENA_THI-4	0.68
PF01526	DDE_Tnp_Tn3	0.68
PF13649	Methyltransf_25	0.68
PF08734	GYD	0.68
PF12973	Cupin_7	0.68
PF06026	Rib_5-P_isom_A	0.68
PF13191	AAA_16	0.68
PF00364	Biotin_lipoyl	0.68
PF06441	EHN	0.68
PF00196	GerE	0.68
PF04075	F420H2_quin_red	0.68
PF00400	WD40	0.68
PF07859	Abhydrolase_3	0.68
PF04542	Sigma70_r2	0.68
PF13545	HTH_Crp_2	0.68
PF02771	Acyl-CoA_dh_N	0.68
PF00027	cNMP_binding	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.04
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.36
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.36
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.36
COG0120	Ribose 5-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.68
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.68
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.68
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.68
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.68
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.68
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.68
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.68
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.68
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.27 %
Unclassified	root	N/A	36.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.27 %
Unclassified	root	N/A	36.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.27 %
Unclassified	root	N/A	36.73 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.30 %
Unclassified	root	N/A	36.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.68 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	40.82 %
Unclassified	root	N/A	36.73 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.36 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.65 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.36 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	0.68 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.73 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.44 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.72 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.36 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.36 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.36 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.36 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.36 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.36 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	0.68 %
Piscirickettsiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.73 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.72 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.36 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1.36 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.36 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.36 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.36 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.36 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.36 %
unclassified Streptosporangiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales	0.68 %
Cycloclasticus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae → Cycloclasticus	0.68 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.73 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.72 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	1.36 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1.36 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.36 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.68 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.68 %
unclassified Cycloclasticus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae → Cycloclasticus → unclassified Cycloclasticus	0.68 %
Yinghuangia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Yinghuangia	0.68 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	0.68 %
Dactylosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	0.68 %
unclassified Nocardioidaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae	0.68 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.73 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.72 %
Arthrobacter castelli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter castelli	1.36 %
Mycolicibacterium obuense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium obuense	1.36 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.36 %
Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	0.68 %
Cycloclasticus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae → Cycloclasticus → unclassified Cycloclasticus → Cycloclasticus sp.	0.68 %
unclassified Yinghuangia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Yinghuangia → unclassified Yinghuangia	0.68 %
Dactylosporangium sucinum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → Dactylosporangium sucinum	0.68 %
Nakamurella lactea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	0.68 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.68 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.68 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.73 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.72 %
Arthrobacter castelli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter castelli	1.36 %
Mycolicibacterium obuense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium obuense	1.36 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.36 %
Yinghuangia sp. ASG 101	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Yinghuangia → unclassified Yinghuangia → Yinghuangia sp. ASG 101	0.68 %
Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	0.68 %
Cycloclasticus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae → Cycloclasticus → unclassified Cycloclasticus → Cycloclasticus sp.	0.68 %
Dactylosporangium sucinum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → Dactylosporangium sucinum	0.68 %
Nakamurella lactea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	0.68 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.68 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.68 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M101CI4UD	Not Available	502	Open in IMG/M
3300003219\|JGI26341J46601_10060236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1167	Open in IMG/M
3300003368\|JGI26340J50214_10061528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1013	Open in IMG/M
3300003505\|JGIcombinedJ51221_10008469	All Organisms → cellular organisms → Bacteria	3265	Open in IMG/M
3300005175\|Ga0066673_10720307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	574	Open in IMG/M
3300005328\|Ga0070676_10373318	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300005437\|Ga0070710_11231798	Not Available	554	Open in IMG/M
3300005533\|Ga0070734_10323345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	882	Open in IMG/M
3300005554\|Ga0066661_10287002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1015	Open in IMG/M
3300005591\|Ga0070761_10213708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1145	Open in IMG/M
3300005602\|Ga0070762_10852806	Not Available	619	Open in IMG/M
3300005610\|Ga0070763_10979412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300005617\|Ga0068859_101434642	Not Available	761	Open in IMG/M
3300005718\|Ga0068866_10158119	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300005921\|Ga0070766_11256314	Not Available	513	Open in IMG/M
3300005944\|Ga0066788_10211460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	505	Open in IMG/M
3300006174\|Ga0075014_100571205	Not Available	643	Open in IMG/M
3300006176\|Ga0070765_101231347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	707	Open in IMG/M
3300006893\|Ga0073928_10135786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2004	Open in IMG/M
3300009012\|Ga0066710_101308555	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1124	Open in IMG/M
3300009698\|Ga0116216_10454155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	776	Open in IMG/M
3300009700\|Ga0116217_10439875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter castelli	824	Open in IMG/M
3300009759\|Ga0116101_1182166	Not Available	528	Open in IMG/M
3300010048\|Ga0126373_11007459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	898	Open in IMG/M
3300010343\|Ga0074044_10066888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2436	Open in IMG/M
3300010359\|Ga0126376_12026877	All Organisms → cellular organisms → Bacteria → Terrabacteria group	618	Open in IMG/M
3300010376\|Ga0126381_101387733	Not Available	1015	Open in IMG/M
3300010379\|Ga0136449_102484703	Not Available	744	Open in IMG/M
3300010379\|Ga0136449_104418806	Not Available	518	Open in IMG/M
3300011106\|Ga0151489_1057062	Not Available	893	Open in IMG/M
3300012208\|Ga0137376_10973489	Not Available	727	Open in IMG/M
3300012351\|Ga0137386_10438396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Piscirickettsiaceae → Cycloclasticus → unclassified Cycloclasticus → Cycloclasticus sp.	941	Open in IMG/M
3300012356\|Ga0137371_11036005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → Dactylosporangium sucinum	620	Open in IMG/M
3300012913\|Ga0157298_10154166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	691	Open in IMG/M
3300012944\|Ga0137410_10779190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	802	Open in IMG/M
3300012971\|Ga0126369_12234685	All Organisms → cellular organisms → Bacteria → Terrabacteria group	634	Open in IMG/M
3300015245\|Ga0137409_11569294	Not Available	509	Open in IMG/M
3300016357\|Ga0182032_10291206	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1285	Open in IMG/M
3300016422\|Ga0182039_10261289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1416	Open in IMG/M
3300017821\|Ga0187812_1077731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1096	Open in IMG/M
3300017822\|Ga0187802_10120306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Yinghuangia → unclassified Yinghuangia → Yinghuangia sp. ASG 101	994	Open in IMG/M
3300017924\|Ga0187820_1105148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	815	Open in IMG/M
3300017926\|Ga0187807_1029934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1686	Open in IMG/M
3300017926\|Ga0187807_1122372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	824	Open in IMG/M
3300017928\|Ga0187806_1045050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1332	Open in IMG/M
3300017932\|Ga0187814_10192014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300017948\|Ga0187847_10122814	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300017955\|Ga0187817_10169759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1389	Open in IMG/M
3300017955\|Ga0187817_11017834	All Organisms → cellular organisms → Bacteria → Terrabacteria group	531	Open in IMG/M
3300017970\|Ga0187783_10964189	Not Available	615	Open in IMG/M
3300017974\|Ga0187777_10425222	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300018038\|Ga0187855_10505829	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300020140\|Ga0179590_1205858	Not Available	539	Open in IMG/M
3300020579\|Ga0210407_10678007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	800	Open in IMG/M
3300020581\|Ga0210399_10419801	Not Available	1115	Open in IMG/M
3300021178\|Ga0210408_10141948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1900	Open in IMG/M
3300021401\|Ga0210393_11297768	Not Available	584	Open in IMG/M
3300021402\|Ga0210385_10664136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	797	Open in IMG/M
3300021406\|Ga0210386_10235141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1560	Open in IMG/M
3300021420\|Ga0210394_10989899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	729	Open in IMG/M
3300021474\|Ga0210390_10537781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	983	Open in IMG/M
3300021479\|Ga0210410_11030538	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300024288\|Ga0179589_10040315	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300025914\|Ga0207671_10454167	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1021	Open in IMG/M
3300025915\|Ga0207693_11085981	Not Available	608	Open in IMG/M
3300025920\|Ga0207649_11331557	Not Available	568	Open in IMG/M
3300025929\|Ga0207664_11511014	Not Available	593	Open in IMG/M
3300025932\|Ga0207690_11572385	Not Available	550	Open in IMG/M
3300026142\|Ga0207698_10899770	Not Available	892	Open in IMG/M
3300026322\|Ga0209687_1120831	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300026490\|Ga0257153_1073372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	690	Open in IMG/M
3300026920\|Ga0208575_1021676	Not Available	578	Open in IMG/M
3300027297\|Ga0208241_1047480	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300027568\|Ga0208042_1021220	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1672	Open in IMG/M
3300027824\|Ga0209040_10008797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7162	Open in IMG/M
3300027853\|Ga0209274_10427983	Not Available	684	Open in IMG/M
3300027855\|Ga0209693_10367095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	697	Open in IMG/M
3300027884\|Ga0209275_10213471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1047	Open in IMG/M
3300027911\|Ga0209698_10768968	Not Available	729	Open in IMG/M
3300028742\|Ga0302220_10033941	All Organisms → cellular organisms → Bacteria	2265	Open in IMG/M
3300028773\|Ga0302234_10072621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1531	Open in IMG/M
3300028792\|Ga0307504_10180599	Not Available	736	Open in IMG/M
3300028801\|Ga0302226_10123149	All Organisms → cellular organisms → Bacteria → Acidobacteria	1141	Open in IMG/M
3300028877\|Ga0302235_10108608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1258	Open in IMG/M
3300028877\|Ga0302235_10167719	Not Available	976	Open in IMG/M
3300028879\|Ga0302229_10009905	All Organisms → cellular organisms → Bacteria	5846	Open in IMG/M
3300028879\|Ga0302229_10099673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1376	Open in IMG/M
3300029943\|Ga0311340_11600140	Not Available	506	Open in IMG/M
3300029951\|Ga0311371_12130893	Not Available	588	Open in IMG/M
3300030054\|Ga0302182_10348555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	622	Open in IMG/M
3300030058\|Ga0302179_10069309	Not Available	1568	Open in IMG/M
3300030058\|Ga0302179_10257194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium obuense	770	Open in IMG/M
3300030524\|Ga0311357_11232409	Not Available	645	Open in IMG/M
3300030706\|Ga0310039_10167360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter castelli	881	Open in IMG/M
3300030739\|Ga0302311_10861848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium obuense	583	Open in IMG/M
3300030743\|Ga0265461_13883490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	508	Open in IMG/M
3300031028\|Ga0302180_10008185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	7331	Open in IMG/M
3300031546\|Ga0318538_10311727	Not Available	848	Open in IMG/M
3300031546\|Ga0318538_10630646	Not Available	581	Open in IMG/M
3300031561\|Ga0318528_10536389	Not Available	628	Open in IMG/M
3300031679\|Ga0318561_10601970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300031682\|Ga0318560_10207490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1048	Open in IMG/M
3300031682\|Ga0318560_10348577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300031708\|Ga0310686_112970075	Not Available	588	Open in IMG/M
3300031713\|Ga0318496_10365343	All Organisms → cellular organisms → Bacteria → Terrabacteria group	797	Open in IMG/M
3300031719\|Ga0306917_10441377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1019	Open in IMG/M
3300031719\|Ga0306917_11167505	Not Available	598	Open in IMG/M
3300031736\|Ga0318501_10378812	Not Available	763	Open in IMG/M
3300031747\|Ga0318502_10433087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	784	Open in IMG/M
3300031748\|Ga0318492_10803124	All Organisms → cellular organisms → Bacteria → Terrabacteria group	506	Open in IMG/M
3300031753\|Ga0307477_10647617	Not Available	710	Open in IMG/M
3300031768\|Ga0318509_10266123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	958	Open in IMG/M
3300031768\|Ga0318509_10601646	All Organisms → cellular organisms → Bacteria → Terrabacteria group	612	Open in IMG/M
3300031771\|Ga0318546_10474519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	877	Open in IMG/M
3300031777\|Ga0318543_10165332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	976	Open in IMG/M
3300031778\|Ga0318498_10496875	Not Available	537	Open in IMG/M
3300031797\|Ga0318550_10065775	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300031799\|Ga0318565_10022913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2762	Open in IMG/M
3300031805\|Ga0318497_10699312	Not Available	568	Open in IMG/M
3300031805\|Ga0318497_10738481	Not Available	552	Open in IMG/M
3300031819\|Ga0318568_10498735	Not Available	759	Open in IMG/M
3300031821\|Ga0318567_10553290	Not Available	653	Open in IMG/M
3300031860\|Ga0318495_10161047	Not Available	1012	Open in IMG/M
3300031893\|Ga0318536_10142254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1217	Open in IMG/M
3300031894\|Ga0318522_10107046	Not Available	1039	Open in IMG/M
3300031910\|Ga0306923_10928793	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300031912\|Ga0306921_11463723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	748	Open in IMG/M
3300031942\|Ga0310916_11145065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	645	Open in IMG/M
3300031946\|Ga0310910_11072505	All Organisms → cellular organisms → Bacteria → Terrabacteria group	628	Open in IMG/M
3300031954\|Ga0306926_10707824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1221	Open in IMG/M
3300031959\|Ga0318530_10049109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1583	Open in IMG/M
3300032001\|Ga0306922_10452608	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300032001\|Ga0306922_12352549	Not Available	510	Open in IMG/M
3300032060\|Ga0318505_10588471	Not Available	523	Open in IMG/M
3300032068\|Ga0318553_10287240	Not Available	860	Open in IMG/M
3300032068\|Ga0318553_10395199	Not Available	724	Open in IMG/M
3300032090\|Ga0318518_10038164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2235	Open in IMG/M
3300032091\|Ga0318577_10620992	Not Available	513	Open in IMG/M
3300032160\|Ga0311301_12299056	Not Available	613	Open in IMG/M
3300032261\|Ga0306920_102808443	Not Available	663	Open in IMG/M
3300032261\|Ga0306920_104255877	Not Available	515	Open in IMG/M
3300032770\|Ga0335085_12115427	Not Available	568	Open in IMG/M
3300032828\|Ga0335080_10375542	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300032892\|Ga0335081_10040966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	7355	Open in IMG/M
3300032895\|Ga0335074_10589173	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300032898\|Ga0335072_10023161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8711	Open in IMG/M
3300032955\|Ga0335076_11746695	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.24%
Host-Associated	Host-Associated	4.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.99%
Aquatic	Environmental → Aquatic	12.24%
Plants	Host-Associated → Plants	4.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.79%
Freshwater	Environmental → Aquatic → Freshwater	10.20%
Peat	Environmental → Terrestrial → Peat	10.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.04%
Sediment	Environmental → Aquatic → Sediment	1.36%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.78%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.20%
Loam	Environmental → Terrestrial → Soil → Loam	10.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.36%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.12%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.12%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.36%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.25%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	10.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.12%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.72%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.04%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.36%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.36%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.68%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026920	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049149

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_07373890	2189573001	Grass Soil	MSSTDPTTIGVHRALHEALNSAREAQHHLDDGDAAPDLDD
JGI26341J46601_100602363	3300003219	Bog Forest Soil	MSSTDPTTIGVHRALHEALNAAREARHRLDDGNAAPDLDDLVELGTL
JGI26340J50214_100615284	3300003368	Bog Forest Soil	MSSTDPTTIGVHRALHEALNSAREARHRLDDGNAAPDLDDLVELGTLLA
JGIcombinedJ51221_100084691	3300003505	Forest Soil	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVELGTLL
Ga0066673_107203072	3300005175	Soil	MSSTDPTTIGVHRALHEALNSAREARHHLDDGDATPDLDDLVELGKLVAGLS
Ga0070676_103733182	3300005328	Miscanthus Rhizosphere	MSSTDPTTIGVHRALHEALIAAREAQHRFDNGDATPDLDDLVEL
Ga0070710_112317981	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSSTDATTIGVHRALHEALNSAREAQHRLNDGEATPDLDDLAELG
Ga0070734_103233451	3300005533	Surface Soil	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDD
Ga0066661_102870023	3300005554	Soil	MSSTDPTTIGVHRALHEALNSAREARHHLDDGDAAPDLDDLVELGKLLAALSESVM
Ga0070761_102137082	3300005591	Soil	MSSTDPTTIGVHRALHEALNSAREAQHRLDDGDAAPDLDDLVELSTLLA
Ga0070762_108528061	3300005602	Soil	MSSTDSTTIGVHRALHEALNSAREAQHRLEDGDATPDLDDL
Ga0070763_109794121	3300005610	Soil	MSSTDSTTIAVHRALHEALNSAREARHHLENGEDGDATPDLDDLVEL
Ga0068859_1014346422	3300005617	Switchgrass Rhizosphere	MSSTDPTTIGVHRALHEALIATREAQHRLDNGDATPDLDDLVEL
Ga0068866_101581192	3300005718	Miscanthus Rhizosphere	MSSTDPTTIGVHRALHEALIATREAQHRFDNGDATPDLDDLVELS
Ga0070766_112563142	3300005921	Soil	MSSTDDTTIAVHRALHEALNSAREAQHRLDDGDATPDLDDLVE
Ga0066788_102114602	3300005944	Soil	MSSTDPTTIGVHRALHEALNAAREARHRLDDGNAAP
Ga0075014_1005712051	3300006174	Watersheds	MSSTDPTTIGVHRALHEALNAAREARHRLDDGNAAPDLDDLVELGTLLAALSES
Ga0070765_1012313472	3300006176	Soil	MSSTDSTTIGVHRALHEALNSAREAQHRLEDGDATPD
Ga0073928_101357861	3300006893	Iron-Sulfur Acid Spring	MSSTDPTTIGVHRALHEALNSAREAQHRLENGDATPDLDD
Ga0066710_1013085552	3300009012	Grasslands Soil	MSSTDPTTIGVHRALHEALNSAREAQHRLDDGDAAADLDDLVELGIIVLR
Ga0116216_104541551	3300009698	Peatlands Soil	MSSTDPTTIGVHRALHEALNSARQARHRLEDGDATPDLDDLVELGTLLAALSESVMAVN
Ga0116217_104398751	3300009700	Peatlands Soil	MSSTDPTTIGVHRALHEALNAAREARHRLDDGNAAPDLDDLVELGTLLAAL
Ga0116101_11821662	3300009759	Peatland	MSSTDPTTIGVHRALHEALNSAREAKHRLDDGDATPDLDDLVELGTLVAGLSEAVV
Ga0126373_110074591	3300010048	Tropical Forest Soil	VSSSDSTTIGVHRALHEAVNSAREARKRLDDGDATPD
Ga0074044_100668881	3300010343	Bog Forest Soil	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVELAK
Ga0126376_120268772	3300010359	Tropical Forest Soil	MSSTDPTTIGVHRALHEALNSAREAQHRLDDGDAAPDLDDLVELGTLLAALSESVMAVN
Ga0126381_1013877332	3300010376	Tropical Forest Soil	VSSTDPTTIAVHRALHEALISAREARHHLDEGDAA
Ga0136449_1024847031	3300010379	Peatlands Soil	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVELGTLLAALSE
Ga0136449_1044188061	3300010379	Peatlands Soil	MSSTDPTTIGVHRALHEALNAAREARHRLDDGNAAPDLD
Ga0151489_10570621	3300011106	Soil	MSSTDPTTIGVHRALHEALNSAREAQHRLDEGDAAPDLDDLVELGTLLAALSESVMA
Ga0137376_109734891	3300012208	Vadose Zone Soil	MSSTDPTTIGVHRALHEALNSAREAQHRLNDGEAAPDLDDLVEL
Ga0137386_104383962	3300012351	Vadose Zone Soil	MSSTDPTTIGVHRALHEALNSAREARHHLDDGDATPDLDDLVELG
Ga0137371_110360052	3300012356	Vadose Zone Soil	MSSTDPTTIGVHRALHEALNSAREAQHHLDDGDATPDL
Ga0157298_101541662	3300012913	Soil	MSSTDPTTIGVHRALHEALIAAREAQHRLDNGDATPDLDDLVELATLLAGLSESV
Ga0137410_107791901	3300012944	Vadose Zone Soil	MSSTDPTTIGVHRALHEALNSAREARHHLDDGDATPDLDDLV
Ga0126369_122346851	3300012971	Tropical Forest Soil	MSSTDPTTIGVHRALQEALNSAREAQHRLDDGDAAPDLDDLVELGT
Ga0137409_115692941	3300015245	Vadose Zone Soil	MSSTDPTTIGVHRALHEALNSAREARHHLEEGDAGDATPDLDDLVELGK
Ga0182032_102912062	3300016357	Soil	MSSTDPTTIGVHRALHEALNSAREAQHHLDDGDAAPDL
Ga0182039_102612891	3300016422	Soil	VSSNDPTTIAVHRALHEALISAREARQHLDDGDAAPDLDDLVELSTLLAGLSESVMAVN
Ga0187812_10777313	3300017821	Freshwater Sediment	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVELGTL
Ga0187802_101203061	3300017822	Freshwater Sediment	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVELG
Ga0187820_11051481	3300017924	Freshwater Sediment	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDL
Ga0187807_10299343	3300017926	Freshwater Sediment	MSSTDSTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLV
Ga0187807_11223722	3300017926	Freshwater Sediment	VSSSDTTTLGVHRALHEALNSARQARHLLDDGEAAPDHDDLVELAKLLAELS
Ga0187806_10450501	3300017928	Freshwater Sediment	MSSTDSTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVELG
Ga0187814_101920141	3300017932	Freshwater Sediment	MSSTDPTTIGVHRALHEALNSAREARHRLEEGDATPD
Ga0187847_101228141	3300017948	Peatland	MSSTDTTTIGVHRALHEALNSAREAQHDLENGDAAPDQDDLVE
Ga0187817_101697592	3300017955	Freshwater Sediment	MSSTDSTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVELGTLLAALSESVMAVN
Ga0187817_110178341	3300017955	Freshwater Sediment	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDAAPDLDDLVELGTLLAALSESV
Ga0187783_109641891	3300017970	Tropical Peatland	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDPEDLVELGT
Ga0187777_104252221	3300017974	Tropical Peatland	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVQLGK
Ga0187855_105058291	3300018038	Peatland	MSSTDPTTIGVHRALHEALNSAREAQHHLDDGDAAPDLDDLVELGTLLAGLSESL
Ga0179590_12058581	3300020140	Vadose Zone Soil	MSSTDPTTIGVHRALHEALNSAREAQHRLNDGDAAPDPDDLVELGTLL
Ga0210407_106780071	3300020579	Soil	VSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLD
Ga0210399_104198011	3300020581	Soil	MSSTDSTTIGVHRALHEALNSAREARHRLEDGDAAPDLDDLVELGTLLAALSESVMAVN
Ga0210408_101419483	3300021178	Soil	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDAT
Ga0210393_112977682	3300021401	Soil	MSSTDPATIGAHRALHEALNSAREARHHLEDGDATPDLDDLVELGKLL
Ga0210385_106641361	3300021402	Soil	MSSSDPTTIGVHRALHEALNSAREAQHRLEDGDATPDLDDLVELGTLLAGLSESIVAV
Ga0210386_102351411	3300021406	Soil	MSSTDPTTIGVHRALHEALNSAREAQHHLENGDATPDLDDLVELGTLLAGLSES
Ga0210394_109898992	3300021420	Soil	MSSTDSTTIGVHRALHEALNSAREARHRLEDGDAA
Ga0210390_105377813	3300021474	Soil	VSSSDTTTIGVHRALHEALNAAREARQRFDDGDAAPDLDDLAELSTLVASLS
Ga0210410_110305382	3300021479	Soil	MSSTDPTTIGVHRALHEALNSAREAQHRLDDGDATPDLDDLVELGKLVAGL
Ga0179589_100403154	3300024288	Vadose Zone Soil	MSSTDPTTIGVHRALHEALNSAREAQHRLNDGDAAPDPDDLVELGT
Ga0207671_104541671	3300025914	Corn Rhizosphere	MSSTDPTTIGVHRALHEALIAAREAQHRFDNGDAT
Ga0207693_110859811	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSSTDPTTIGVHRALHEALNSAREAQHRLDDGDAAPDLDDLVELGTLLA
Ga0207649_113315571	3300025920	Corn Rhizosphere	MSSTDPTTIGVHRALHEALIATREAQHRFDNGDATPD
Ga0207664_115110141	3300025929	Agricultural Soil	MSSTDPTTIGVHRALHEALIATREAQHRLDNGDATPDLDDLV
Ga0207690_115723851	3300025932	Corn Rhizosphere	MSSTDPTTIGVHRALHEALIATREAQHRFDNGDATPDLDDLV
Ga0207698_108997701	3300026142	Corn Rhizosphere	MSSTDPTTIGVHRALHEALIATREAQHRFDNGDATPDLD
Ga0209687_11208312	3300026322	Soil	MSSTDPTTIGVHRALHEALNSAREARHHLQDGDAVP
Ga0257153_10733721	3300026490	Soil	MSSTDPTTIGVHRALHEALNSAREARHHLDDGDATPDLDDLVELGKLVAALS
Ga0208575_10216762	3300026920	Soil	MSSTDPTTIGVHRALHEALNSAREAQHHLDDGDAAPDLDDLVELGKLLAGLSES
Ga0208241_10474804	3300027297	Forest Soil	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVELGTLLAG
Ga0208042_10212203	3300027568	Peatlands Soil	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLV
Ga0209040_100087971	3300027824	Bog Forest Soil	MSSTDPTTIGVHRALHEALNAAREARHRLDDGNAAPDLDDLVELGTLLAALSESV
Ga0209274_104279831	3300027853	Soil	MSSTDDTTIAVHRALHEALNSAREAQHRLDDGDATPDLDDLVELGKLLAGLSESIMA
Ga0209693_103670951	3300027855	Soil	MSSTDSTTIAVHRALHEALNSAREARHHLENGEDGDATPDLDDLVELG
Ga0209275_102134711	3300027884	Soil	MSSTDPTTIGVHRALHEALNSAREAQHRLDDGDAAPDLDDLVELSTLLAGLS
Ga0209698_107689681	3300027911	Watersheds	MSSTDPTTIGVHRALHEALNSAREARHHLNDGDATPDLDDLVE
Ga0302220_100339413	3300028742	Palsa	MSSTDPTTIGVHRALHEALNSAREAQHRLDDGDAAPDLDDLV
Ga0302234_100726211	3300028773	Palsa	MSSTDPTTIGVHRALHEALNSAREAQHRLDDGDAAP
Ga0307504_101805992	3300028792	Soil	MSSTDPTTIGVHRALHEALNSAREAQHRLNDGDAAPDLDDLVELGTLL
Ga0302226_101231491	3300028801	Palsa	MSSTDPTTIGVHRALHEALNSAREARHRLDDGDAAPDLDDLVELGTLLAGLSESLTAV
Ga0302235_101086082	3300028877	Palsa	MSSTDPTTIGVHRALHEALNSAREARHRLDDGDATPDLDDLVELGTLL
Ga0302235_101677191	3300028877	Palsa	MSSTDPTTIGVHRALHEALIAAREAQHHLDDGNATPDLDDLVELGTLL
Ga0302229_100099051	3300028879	Palsa	MSSTDPTTIGVHRALHEALNSAREARHRLDDGDAAPDLDDLVELGTLLAGLS
Ga0302229_100996733	3300028879	Palsa	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATP
Ga0311340_116001401	3300029943	Palsa	MSSTDPTTIGVHRALHEALNSAREAQHRLDDGDATPDLDDLVELG
Ga0311371_121308931	3300029951	Palsa	MSSTDPTTIGVHRALHEALIAAREAQHHLDDGNATPDLDD
Ga0302182_103485551	3300030054	Palsa	MSSTDPTTIGVHRALHEALNSAREARHRLDDGDAAPDLDDLV
Ga0302179_100693091	3300030058	Palsa	MSSTDPTTIGVHRALHEALNSAREARHRLDDGDAAPDLDDLVELGTLLAGLSES
Ga0302179_102571943	3300030058	Palsa	MSSTDPTTIGVHRALHEALNSAREARHHLEDGDATPDLDD
Ga0311357_112324092	3300030524	Palsa	MSSTDPTTIGVHRALHEALIAAREAQHHLDDGNATPDLDDLVELGTLLAA
Ga0310039_101673603	3300030706	Peatlands Soil	MSSTDPTTIGVHRALHEALNAAREARHRLDDGNAAPDLDDLVELGTLLA
Ga0302311_108618482	3300030739	Palsa	MSSTDPTTIGVHRALHEALNSAREARHHLEDGDATPDLDDLVELGTLLAGL
Ga0265461_138834902	3300030743	Soil	MSSTDTATIAVHRALHEAVNSAREARHRLEDEDATPDLDDLVELAK
Ga0302180_1000818511	3300031028	Palsa	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVELGTLLAGLSE
Ga0318538_103117272	3300031546	Soil	VSSSDPTTIGVHRALHEALNSAREARKRLDDGDAAPDLDDLVELGNLLAALSESVMA
Ga0318538_106306461	3300031546	Soil	MSSTDPTTIGVHRALHEALNSAREARHHLEDGDATPDLDDLVELG
Ga0318528_105363891	3300031561	Soil	VSSSDPTTIGVHRALHEALNSAREARKRLDDGDATPDLDDLVELGNLLAALSE
Ga0318561_106019702	3300031679	Soil	MSSTDSTTIGVHRALHEALNSAREARHRLEDGDATP
Ga0318560_102074903	3300031682	Soil	MSSTDPTTIGVHRALHEALNSAREARNRLNNGDATPDLDDLV
Ga0318560_103485772	3300031682	Soil	MSSTDSTTIGVHRALHEALNSAREARNRLENGDATPDLDDLV
Ga0310686_1129700752	3300031708	Soil	MSSNDTTTIGVHRALHEALNSAREAQHRLDDGDATPDLDDLVELGKLLAGLSESIMAVN
Ga0318496_103653432	3300031713	Soil	MSSTDPTTIGVHRALHEALNSAREAQHHLDDGDATPD
Ga0306917_104413771	3300031719	Soil	VSSSDPTTIGVHRALHEAVNSAREARQRLDDGDAAPDLD
Ga0306917_111675051	3300031719	Soil	MSSTDPTTIGVHRALHEALNSAREARHHLDDGDATPDLD
Ga0318501_103788121	3300031736	Soil	MSSTDPTTIGVHRALHEALNSAREAKHHFDEGDATPDLDDLVELG
Ga0318502_104330871	3300031747	Soil	VSSNDPTTIAVHRALHEALISAREARQHLDDGDAAPDLDDLVELSTLLAALSESVMAVNS
Ga0318492_108031241	3300031748	Soil	MSSTDPTTIGVHRALHEALNSAREAQHHLDDGDAAPD
Ga0307477_106476171	3300031753	Hardwood Forest Soil	MSSTDSTTIGVHRALHEALNSAREARHRLEGGDATPDLDDLVELGTLL
Ga0318509_102661231	3300031768	Soil	VSSTDETTIGVHRALHEALNSAREARHRLEDGDAAPDL
Ga0318509_106016461	3300031768	Soil	MSSTDPTTIGVHRALHEALNSAREAQHHLDDGDAAPDLD
Ga0318546_104745191	3300031771	Soil	VSSTDPTTIGVHRALHEALNSAREARHRLEDGDAAPDLDDLV
Ga0318543_101653321	3300031777	Soil	VSSNDPTTIAVHRALHEALISAREARQHLDDGDAAPDLDDLVELSTLL
Ga0318498_104968752	3300031778	Soil	MSSTDPTTIAVHRALHEALNSAREARHHLEDGDATPDRDD
Ga0318550_100657755	3300031797	Soil	MSSTDPTTIGVHRALHEALNSAREARHHLEDGDATPDLDDLV
Ga0318565_100229131	3300031799	Soil	VSSSDPTTIGVHRALHEAVNSAREARQRLDDGDAAPDLDDLVALGNLLAA
Ga0318497_106993121	3300031805	Soil	VSSSDPTTIGVHRALHEALNSAREARKRLDDGDAAPDLDD
Ga0318497_107384811	3300031805	Soil	VSSSDPTTIGVHRALHEALNSAREARKRFDDGDASPDLDDLVELGNLVAALSESLMAVN
Ga0318568_104987353	3300031819	Soil	MSSTDPTTIGVHRALHEALNSAREARHHLEDGDATPDLDDLVELGTLLAALSE
Ga0318567_105532901	3300031821	Soil	MSSTDPTTIGVHRALHEALNSAREAKHHFDDGDATPDLDDLVELSKLLAGLSE
Ga0318495_101610472	3300031860	Soil	MSSTDPTTIGVHRALHEALNSAREAKHHFDDGDATPDLDDLVELSKLLAGLSES
Ga0318536_101422542	3300031893	Soil	VSSSDPTTIGVHRALHEAVNSAREARQRLDDGDAAPDLDDLVALGNLLAALSESVMAIN
Ga0318522_101070461	3300031894	Soil	MSSTDPTTIGVHRALHEALNSAREAKHHFDDGDATPDLDDLVELSKLLA
Ga0306923_109287932	3300031910	Soil	VSSTDPTTIGVHRALHEALNSAREARHRLEDGDAAPDLDDLVELGTLLAAL
Ga0306921_114637232	3300031912	Soil	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVELATLLS
Ga0310916_111450651	3300031942	Soil	MSSTDPTTIGVHRALHEALNSAREARHHLEDGDATPDLDDLVELGTLLAALSESVMAVN
Ga0310910_110725052	3300031946	Soil	MSSTDPTTIGVHRALHEALNSAREAQHHLDDGDATPDLDDLV
Ga0306926_107078242	3300031954	Soil	VSSTDPTTIAVHRALHEALISAREARQHLDDGDAAPDLDDLVELSTLLA
Ga0318530_100491091	3300031959	Soil	VSSTDETTIGVHRALHEALNSAREARHRLEDGDAAPDLDDLVELGTL
Ga0306922_104526081	3300032001	Soil	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVEL
Ga0306922_123525491	3300032001	Soil	VSSSDPTTIGVHRALHEALNSAREARQRLDDGDATPDLDDLAEL
Ga0318505_105884711	3300032060	Soil	MSSTDLTTIGVHRALHEALNSAREAQHHLEDGDATPDLDDLVELGKLLAALSESVMA
Ga0318553_102872402	3300032068	Soil	MSSTDPTTIGVHRALHEALNSAREAKHHFDEGDATPDLDDLVE
Ga0318553_103951992	3300032068	Soil	VSSSDPTTIGVHRALHEALNSAREARKRLDDGDATPDLDDLVELGNLLAALSES
Ga0318518_100381642	3300032090	Soil	VSSSDPTTIGVHRALHEAVNSAREARQRLDDGDAAPDLDDLVALGNLLAALSE
Ga0318577_106209921	3300032091	Soil	MSSTDPTTIGVHRALHEALNSAREARHHLDDGDATPDLDDLVELSTLLTALSE
Ga0311301_122990562	3300032160	Peatlands Soil	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVELGTLLAALSES
Ga0306920_1028084431	3300032261	Soil	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDATPDLDDLVELGKL
Ga0306920_1042558772	3300032261	Soil	VSSTDPTTIGVHRALHEALNSAREARHRLEDGDAAPDLDDLVELGTLL
Ga0335085_121154272	3300032770	Soil	MSSTDPTTIGVHRALHEALNSAREARHHLEDGDATPDLDDLVELGKLLAALSESVMAV
Ga0335080_103755421	3300032828	Soil	MSSTDPTTIGVHRALHEALNSAREAQHRLDEGDATPDL
Ga0335081_100409661	3300032892	Soil	MSSTDPTTIGVHRALHEALNSAREARHRLQDGDAAPD
Ga0335074_105891733	3300032895	Soil	MSSTDATTIGVHRALHEALNSAREAQHHLEDGEATPDLE
Ga0335072_100231611	3300032898	Soil	MSSTDPTTIGVHRALHEALNSAREARHRLEDGDAAPDL
Ga0335076_117466951	3300032955	Soil	MSSTDPTTIGVHRALHEALNSAREARHRLQDGDAAPDLDDLVELGT

Hidden Markov Model


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