Metagenome / Metatranscriptome Family F048977

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048977
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	43 residues
Representative Sequence	MHTWIDGWDWFWMTLMMGFWLVVLGAVIYIAVRLAQRPPTKPRAG
Number of Associated Samples	88
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.91 %
% of genes near scaffold ends (potentially truncated)	18.37 %
% of genes from short scaffolds (< 2000 bps)	69.39 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.871 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (41.497 % of family members)
Environment Ontology (ENVO)	Unclassified (52.381 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.537 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.21% β-sheet: 0.00% Coil/Unstructured: 54.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF00403	HMA	13.61
PF11666	DUF2933	8.16
PF00196	GerE	4.08
PF14342	DUF4396	4.08
PF07992	Pyr_redox_2	2.72
PF00005	ABC_tran	2.72
PF04972	BON	2.04
PF00462	Glutaredoxin	2.04
PF07883	Cupin_2	2.04
PF02627	CMD	1.36
PF00034	Cytochrom_C	1.36
PF00571	CBS	1.36
PF02583	Trns_repr_metal	1.36
PF00702	Hydrolase	1.36
PF03401	TctC	0.68
PF13191	AAA_16	0.68
PF06224	HTH_42	0.68
PF08281	Sigma70_r4_2	0.68
PF01475	FUR	0.68
PF00578	AhpC-TSA	0.68
PF13579	Glyco_trans_4_4	0.68
PF13565	HTH_32	0.68
PF08940	DUF1918	0.68
PF04945	YHS	0.68
PF00296	Bac_luciferase	0.68
PF12849	PBP_like_2	0.68
PF08002	DUF1697	0.68
PF01022	HTH_5	0.68
PF00753	Lactamase_B	0.68
PF12704	MacB_PCD	0.68
PF07695	7TMR-DISM_7TM	0.68
PF12716	Apq12	0.68
PF00361	Proton_antipo_M	0.68
PF00116	COX2	0.68
PF01244	Peptidase_M19	0.68
PF01545	Cation_efflux	0.68
PF09948	DUF2182	0.68
PF13071	DUF3935	0.68
PF09832	DUF2059	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	13.61
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	13.61
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.36
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	1.36
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.36
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.68
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.68
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.68
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.68
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	0.68
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.68
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.68
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	0.68
COG3797	Uncharacterized conserved protein, DUF1697 family	Function unknown [S]	0.68
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.68
COG4263	Nitrous oxide reductase	Inorganic ion transport and metabolism [P]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.87 %
Unclassified	root	N/A	23.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.87 %
Unclassified	root	N/A	23.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.87 %
Unclassified	root	N/A	23.13 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.86 %
Unclassified	root	N/A	23.13 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	6.12 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.68 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.46 %
Unclassified	root	N/A	23.13 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	6.12 %
uncultured bacterium F41-01	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F41-01	0.68 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.13 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15.65 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	6.12 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.72 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	1.36 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	1.36 %
uncultured bacterium F41-01	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F41-01	0.68 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.13 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.52 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	4.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.04 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.04 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	1.36 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	1.36 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.36 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.68 %
uncultured bacterium F41-01	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F41-01	0.68 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.13 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.52 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	4.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.04 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	1.36 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.36 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	1.36 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.36 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.68 %
uncultured bacterium F41-01	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F41-01	0.68 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.13 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.52 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	4.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.04 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.36 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	1.36 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	1.36 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.36 %
Thermoleophilum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum	0.68 %
uncultured bacterium F41-01	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F41-01	0.68 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.13 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.52 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	4.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.04 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1.36 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	1.36 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.36 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	0.68 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.68 %
uncultured bacterium F41-01	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F41-01	0.68 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.13 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.52 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	4.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.04 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1.36 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	1.36 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.36 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.68 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	0.68 %
uncultured bacterium F41-01	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F41-01	0.68 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y02IH4I3	Not Available	661	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0753818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1538	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0755177	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300000156\|NODE_c0280471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300000550\|F24TB_11912957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	759	Open in IMG/M
3300000953\|JGI11615J12901_10106797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300000956\|JGI10216J12902_103051035	Not Available	1144	Open in IMG/M
3300000956\|JGI10216J12902_103996577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3407	Open in IMG/M
3300000956\|JGI10216J12902_106595524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	803	Open in IMG/M
3300000956\|JGI10216J12902_115631163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300001537\|A2065W1_10111741	Not Available	687	Open in IMG/M
3300001538\|A10PFW1_10576057	Not Available	3044	Open in IMG/M
3300003990\|Ga0055455_10004108	All Organisms → cellular organisms → Bacteria	2820	Open in IMG/M
3300004114\|Ga0062593_100051867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2565	Open in IMG/M
3300004156\|Ga0062589_101973457	Not Available	591	Open in IMG/M
3300004463\|Ga0063356_103618310	Not Available	666	Open in IMG/M
3300004480\|Ga0062592_102595854	Not Available	511	Open in IMG/M
3300004643\|Ga0062591_100109436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1813	Open in IMG/M
3300005045\|Ga0071328_134542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6395	Open in IMG/M
3300005045\|Ga0071328_136203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3902	Open in IMG/M
3300005172\|Ga0066683_10128382	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300005467\|Ga0070706_101791468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300005529\|Ga0070741_10014360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13700	Open in IMG/M
3300005558\|Ga0066698_11024528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300005713\|Ga0066905_100284895	Not Available	1289	Open in IMG/M
3300005713\|Ga0066905_100607109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	927	Open in IMG/M
3300005713\|Ga0066905_100709422	Not Available	864	Open in IMG/M
3300005713\|Ga0066905_100765854	Not Available	834	Open in IMG/M
3300005713\|Ga0066905_102226996	Not Available	511	Open in IMG/M
3300006575\|Ga0074053_10619174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	602	Open in IMG/M
3300006638\|Ga0075522_10123694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1373	Open in IMG/M
3300007820\|Ga0104324_110571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1203	Open in IMG/M
3300009012\|Ga0066710_102001435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300009090\|Ga0099827_10118638	All Organisms → cellular organisms → Bacteria	2127	Open in IMG/M
3300009789\|Ga0126307_10000359	All Organisms → cellular organisms → Bacteria	29387	Open in IMG/M
3300009818\|Ga0105072_1085268	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F41-01	623	Open in IMG/M
3300009837\|Ga0105058_1134317	Not Available	595	Open in IMG/M
3300009840\|Ga0126313_10031146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	3658	Open in IMG/M
3300009840\|Ga0126313_10309284	Not Available	1237	Open in IMG/M
3300010038\|Ga0126315_10898278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300010047\|Ga0126382_10040296	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2650	Open in IMG/M
3300010166\|Ga0126306_10069636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2483	Open in IMG/M
3300010166\|Ga0126306_11635036	Not Available	537	Open in IMG/M
3300011003\|Ga0138514_100000070	All Organisms → cellular organisms → Bacteria	8560	Open in IMG/M
3300011991\|Ga0120153_1003492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5592	Open in IMG/M
3300012014\|Ga0120159_1022253	All Organisms → cellular organisms → Bacteria	2317	Open in IMG/M
3300012014\|Ga0120159_1066859	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	1086	Open in IMG/M
3300012199\|Ga0137383_10100272	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	2103	Open in IMG/M
3300012199\|Ga0137383_10310240	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300012199\|Ga0137383_11089268	Not Available	579	Open in IMG/M
3300012201\|Ga0137365_10008843	All Organisms → cellular organisms → Bacteria	8000	Open in IMG/M
3300012201\|Ga0137365_10976299	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	615	Open in IMG/M
3300012204\|Ga0137374_10004097	All Organisms → cellular organisms → Bacteria	17329	Open in IMG/M
3300012204\|Ga0137374_10005313	All Organisms → cellular organisms → Bacteria	15316	Open in IMG/M
3300012204\|Ga0137374_10006474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13942	Open in IMG/M
3300012204\|Ga0137374_10022201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7163	Open in IMG/M
3300012204\|Ga0137374_10033200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5602	Open in IMG/M
3300012204\|Ga0137374_10039773	All Organisms → cellular organisms → Bacteria	4998	Open in IMG/M
3300012204\|Ga0137374_10048189	All Organisms → cellular organisms → Bacteria	4423	Open in IMG/M
3300012204\|Ga0137374_10074529	All Organisms → cellular organisms → Bacteria	3323	Open in IMG/M
3300012204\|Ga0137374_10082403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	3108	Open in IMG/M
3300012204\|Ga0137374_10214793	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	1643	Open in IMG/M
3300012204\|Ga0137374_10319341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1266	Open in IMG/M
3300012204\|Ga0137374_10344173	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300012204\|Ga0137374_10377637	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	1134	Open in IMG/M
3300012204\|Ga0137374_10444202	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300012204\|Ga0137374_10844665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300012204\|Ga0137374_10946699	Not Available	628	Open in IMG/M
3300012204\|Ga0137374_10948213	Not Available	627	Open in IMG/M
3300012204\|Ga0137374_10949955	Not Available	626	Open in IMG/M
3300012206\|Ga0137380_10981039	Not Available	723	Open in IMG/M
3300012207\|Ga0137381_10042939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3707	Open in IMG/M
3300012209\|Ga0137379_10255547	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300012350\|Ga0137372_10038963	All Organisms → cellular organisms → Bacteria	4301	Open in IMG/M
3300012350\|Ga0137372_10146930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1929	Open in IMG/M
3300012350\|Ga0137372_10285072	Not Available	1286	Open in IMG/M
3300012350\|Ga0137372_10734590	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	712	Open in IMG/M
3300012350\|Ga0137372_10756347	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300012350\|Ga0137372_10892828	Not Available	631	Open in IMG/M
3300012353\|Ga0137367_10001888	All Organisms → cellular organisms → Bacteria	16623	Open in IMG/M
3300012353\|Ga0137367_10141403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1759	Open in IMG/M
3300012353\|Ga0137367_10143159	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300012354\|Ga0137366_10099481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2205	Open in IMG/M
3300012354\|Ga0137366_11217227	Not Available	511	Open in IMG/M
3300012355\|Ga0137369_10000882	All Organisms → cellular organisms → Bacteria	28794	Open in IMG/M
3300012355\|Ga0137369_10110351	All Organisms → cellular organisms → Bacteria	2241	Open in IMG/M
3300012355\|Ga0137369_10138949	Not Available	1942	Open in IMG/M
3300012355\|Ga0137369_10386759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1012	Open in IMG/M
3300012355\|Ga0137369_10574658	Not Available	787	Open in IMG/M
3300012355\|Ga0137369_10913187	Not Available	589	Open in IMG/M
3300012355\|Ga0137369_11097883	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300012356\|Ga0137371_10049132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3262	Open in IMG/M
3300012356\|Ga0137371_10593231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	851	Open in IMG/M
3300012357\|Ga0137384_10156176	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	1909	Open in IMG/M
3300012358\|Ga0137368_10245784	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1240	Open in IMG/M
3300012358\|Ga0137368_10337663	Not Available	1006	Open in IMG/M
3300012358\|Ga0137368_10441857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	847	Open in IMG/M
3300012358\|Ga0137368_10914264	All Organisms → cellular organisms → Bacteria → Terrabacteria group	534	Open in IMG/M
3300012360\|Ga0137375_10103990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2883	Open in IMG/M
3300012360\|Ga0137375_10176675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2053	Open in IMG/M
3300012360\|Ga0137375_10499608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1036	Open in IMG/M
3300012360\|Ga0137375_10639590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	879	Open in IMG/M
3300012360\|Ga0137375_10981023	Not Available	666	Open in IMG/M
3300012532\|Ga0137373_10315551	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300012532\|Ga0137373_10426311	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300012532\|Ga0137373_10869576	Not Available	663	Open in IMG/M
3300012532\|Ga0137373_10973453	All Organisms → cellular organisms → Bacteria → Terrabacteria group	616	Open in IMG/M
3300012904\|Ga0157282_10382749	Not Available	522	Open in IMG/M
3300012931\|Ga0153915_10049924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4289	Open in IMG/M
3300012955\|Ga0164298_10251497	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300012957\|Ga0164303_11007693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300013772\|Ga0120158_10495936	Not Available	539	Open in IMG/M
3300014301\|Ga0075323_1129660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300015190\|Ga0167651_1075663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	672	Open in IMG/M
3300015200\|Ga0173480_10108961	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300015371\|Ga0132258_12627894	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300016404\|Ga0182037_10846122	Not Available	791	Open in IMG/M
3300017659\|Ga0134083_10578687	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300018028\|Ga0184608_10005212	All Organisms → cellular organisms → Bacteria	4185	Open in IMG/M
3300018031\|Ga0184634_10009516	All Organisms → cellular organisms → Bacteria	3422	Open in IMG/M
3300018031\|Ga0184634_10117031	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300018052\|Ga0184638_1004050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4671	Open in IMG/M
3300018056\|Ga0184623_10289839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741	Open in IMG/M
3300018063\|Ga0184637_10437146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300018077\|Ga0184633_10104314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1465	Open in IMG/M
3300019875\|Ga0193701_1053277	Not Available	816	Open in IMG/M
3300025174\|Ga0209324_10520641	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300025313\|Ga0209431_10167324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1741	Open in IMG/M
3300025324\|Ga0209640_11034941	Not Available	630	Open in IMG/M
3300025552\|Ga0210142_1002358	All Organisms → cellular organisms → Bacteria	3579	Open in IMG/M
3300025862\|Ga0209483_1082681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1436	Open in IMG/M
3300028715\|Ga0307313_10013029	All Organisms → cellular organisms → Bacteria	2157	Open in IMG/M
3300028721\|Ga0307315_10252498	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	554	Open in IMG/M
3300028755\|Ga0307316_10384741	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300028875\|Ga0307289_10391598	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	572	Open in IMG/M
3300028880\|Ga0307300_10121645	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300031226\|Ga0307497_10044161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1530	Open in IMG/M
3300031564\|Ga0318573_10425329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	714	Open in IMG/M
3300031576\|Ga0247727_10077785	All Organisms → cellular organisms → Bacteria	3678	Open in IMG/M
3300031576\|Ga0247727_10140394	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300031910\|Ga0306923_11147587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300032090\|Ga0318518_10512385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300033233\|Ga0334722_10025892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4917	Open in IMG/M
3300033290\|Ga0318519_10880790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300033407\|Ga0214472_10188117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2004	Open in IMG/M
3300033811\|Ga0364924_123884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300034113\|Ga0364937_023299	Not Available	1040	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.28%
Host-Associated	Host-Associated	1.36%
Engineered	Engineered	1.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.80%
Aquatic	Environmental → Aquatic	7.48%
Plants	Host-Associated → Plants	1.36%
Solid Waste	Engineered → Solid Waste	1.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.39%
Sediment	Environmental → Aquatic → Sediment	4.76%
Freshwater	Environmental → Aquatic → Freshwater	1.36%
Marine	Environmental → Aquatic → Marine	1.36%
Cave	Environmental → Terrestrial → Cave	1.36%
Floodplain	Environmental → Terrestrial → Floodplain	1.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.36%
Grass	Engineered → Solid Waste → Grass	1.36%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.23%
Loam	Environmental → Terrestrial → Soil → Loam	6.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.36%
Sand	Environmental → Terrestrial → Soil → Sand	1.36%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.36%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.36%
Composting	Engineered → Solid Waste → Grass → Composting	1.36%
Lake	Environmental → Aquatic → Freshwater → Lake	0.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	57.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.72%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.36%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.36%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.36%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.36%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.36%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.68%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.68%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.68%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.68%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	41.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.12%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	5.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.04%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.36%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.36%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.36%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.36%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.36%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.36%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.68%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.68%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.68%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.68%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.68%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300007820	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-12-2 Soapdenovo	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental	Open in IMG/M
3300015190	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4a, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025552	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_02317130	2170459021	Switchgrass, Maize And Mischanthus Litter	VHWMIGWNWAWMTFMMVFWIVALGAVIYAAVRIAHRPPRERNS
ICChiseqgaiiDRAFT_07538182	3300000033	Soil	VHAWTDGWGWFWMAFMMAFWVVLIGAVVYVAVRLAQRAPK*
ICChiseqgaiiDRAFT_07551772	3300000033	Soil	MHAWIDGWGWFWMAFMMAFWAVLIGAVVYVAARLAQRSPK*
NODE_02804712	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MNGWDWVWMSVIMVFWIVVLGAVVYAAVRLGQGSPHRHH*
F24TB_119129572	3300000550	Soil	MMDGWDWVWMPFMMVFWLVVLGAVIYVAVRLANRPPR*
JGI11615J12901_101067971	3300000953	Soil	MHTWIDGWGLFWMAFMMAFWVVLIGAVVYIAVRLAQRSPK*
JGI10216J12902_1030510352	3300000956	Soil	MHTWIDGWDWLWMTLMMGFWLVILGAVIYIAVRLAHRPPTKPRADS*
JGI10216J12902_1039965772	3300000956	Soil	VHGWMDSWDWVWMSFMMVFWLVVLGAVVFAAVRLAQRPPRKDH*
JGI10216J12902_1065955242	3300000956	Soil	MIGWNWAWMTFMMVFWIVALGAVIYAAVRIAHRPPRERNS*
JGI10216J12902_1156311632	3300000956	Soil	MHWMDGWDWAWMTFMMVFWFALLGVAVYVAVRLATRPPTDRQQL*
A2065W1_101117412	3300001537	Permafrost	MHGWMDGTDWIWMTLMMSFWVVLLGAVVYVAVRLAQRPPTKPRADS*
A10PFW1_105760576	3300001538	Permafrost	MHAWVNGWDWVWMTFMMGFWVVLIGAVVYIAVRLAHRPPTKPRAGS*
Ga0055455_100041082	3300003990	Natural And Restored Wetlands	MYGHMTDWGWLWMSSMTAFWIVLVGAVVYIAVKLANRDTDHRRPT*
Ga0062593_1000518672	3300004114	Soil	MHTWIDGWGWFWMAFMMGLWVVLIGAVVYIAARLAQRSPK*
Ga0062589_1019734571	3300004156	Soil	MSMDGWDWLWMSFMSAFWLLLLGAVVYVAVRLATRPPHRSS*
Ga0063356_1036183102	3300004463	Arabidopsis Thaliana Rhizosphere	MHVWIDSWGWFGMPLMMGVWVVLIGAVVYSAVRLAQRPPK*
Ga0062592_1025958542	3300004480	Soil	VHAWIDGWDWFWMAFMMALWVALIGAVVYIAVRLAQRSPQ*
Ga0062591_1001094363	3300004643	Soil	MHGWMDGSDWLWMTMMMGLWLVLLGAVVYITVRLVTVRLAQRPPTKPRSEYPPDTP*
Ga0071328_1345424	3300005045	Permafrost	VYWMDGWDWFWMNFMMVFWLVALGVVIYVAVKLATRPPREGSK*
Ga0071328_1362036	3300005045	Permafrost	MHWMDGWDWAWMTYMMIFWVVALGVAVYVAVKLATRRPTDRG*
Ga0066683_101283824	3300005172	Soil	MHAWVDGWDWVWMTFMMGFWVVLLGAVVYIAVRLAQRPPTKPRAGS*
Ga0070706_1017914682	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDGWGWFWMTFMMVFWVVVLGAVIYVAVELANRRPTDPTSHS*
Ga0070741_100143609	3300005529	Surface Soil	VHGWMDGADWVWMSFVMVFWIVVLGAVVYAAVKLAQRPPHKRS*
Ga0066698_110245282	3300005558	Soil	MHGWMSGWDWLWMSFLMVFWIAVIGGVVYAAVRLA
Ga0066905_1002848953	3300005713	Tropical Forest Soil	MHGWIDAWDWLWMSLMMAFWFVVLGGVIFVAVRLAQRPPTKSNAR*
Ga0066905_1006071092	3300005713	Tropical Forest Soil	MHWMDGWDWLWMTLMMGFWLVVLCAVIFIAVRLAQRPPTKPRADS*
Ga0066905_1007094222	3300005713	Tropical Forest Soil	MHTWVNGWDWLWTTMMMGFWLVVLGAVIFIAVRLAQRPRA*
Ga0066905_1007658541	3300005713	Tropical Forest Soil	MYHWMSDWSWFWMTFMMVFWIVVLGAVIYVAVRLAQRPPDGKHS*
Ga0066905_1022269961	3300005713	Tropical Forest Soil	VHGWMDGWDWVWMSFMMVFWIAFLGAVVYAAVGLAQRPPHKGS*
Ga0074053_106191741	3300006575	Soil	WIWMSLMMAFWVVLIGAVVFIAVRLAQRPPTKPRADS*
Ga0075522_101236942	3300006638	Arctic Peat Soil	MNSGSDWVWMSFMMVLGVVVLGAVVYVAVRLAQRPLREHPS*
Ga0104324_1105712	3300007820	Soil	MHAWMDGWDWIWMPFMMGFWIVVLGAVVYIAVRLARQPPTKPRADS*
Ga0066710_1020014354	3300009012	Grasslands Soil	MYLWMNEWGCFWMTFMMVFWVVLLGAVIYVAVRLGQRPPGEKHS
Ga0099827_101186384	3300009090	Vadose Zone Soil	ADTQLTREEKGDAMHTWIDGWDWVWMTFMIVFWVVLLGAVVYIAVRLAQRPPTKPKAGS*
Ga0126307_1000035934	3300009789	Serpentine Soil	MMDGWDWAWMPFMMIFWLVVLGAVIYVAVRLANRPPR*
Ga0105072_10852681	3300009818	Groundwater Sand	MDGWGWIWMSFMMVFWAVVLGAVVYVAVRLAQRPTRQRQH*
Ga0105058_11343171	3300009837	Groundwater Sand	MYHWMDGWGWIWMSFMMVFWAVVLGAVVYVAVRLAQRPTRQRQH*
Ga0126313_100311462	3300009840	Serpentine Soil	MHTWVNGWDWLWMTLMMGFWLVVLGAVIYIAVRLAHRPPAQPRADS*
Ga0126313_103092841	3300009840	Serpentine Soil	MDGFDWLWMTLMMGSWLVVIAAVVLFAVRLATRQPRSGDP*
Ga0126315_108982782	3300010038	Serpentine Soil	MDGWDWLWMTFMMGFFFVAIGAVVYISVRLAQHVPRGRNT*
Ga0126382_100402961	3300010047	Tropical Forest Soil	MDGWDWVWMSFMMVFWIAFLGAVVYAAVGLAQRPPHKGS*
Ga0126306_100696364	3300010166	Serpentine Soil	MDGWDWLWMTFGMGFWIVLVGVVVYVAVRLATRWPRAGHP*
Ga0126306_116350362	3300010166	Serpentine Soil	MNGWDWVWMTFMMVFWVVLLGAVVYGAIRLAQRSPREGKS*
Ga0138514_10000007011	3300011003	Soil	MHGWMNGWDWFWMTFMMILWIAGLGAVVYAAVRLAQREPHQ*
Ga0120153_10034921	3300011991	Permafrost	MHNWMDGSDWIWMTLMMSFWVVLLGVAVYIAVRLAQRPPTKPRADS*
Ga0120159_10222533	3300012014	Permafrost	MHAWMDGWDWVWMTFMMGFWVILIGAVVYIAVRLAQQPPTKP*
Ga0120159_10668593	3300012014	Permafrost	DWVWMTFMMGFWVVLIGAVVYIAVRLAHRPPTKPRAGS*
Ga0137383_101002722	3300012199	Vadose Zone Soil	MHAWVDGWDWVWMTFIMGFWVVLLGAVVYIAVRLAQRPPTKPRAGS*
Ga0137383_103102402	3300012199	Vadose Zone Soil	MHTWIDGWDWLWMTLTMGFWLVVLGAVIYIAVRLAQRPPTRPRTDS*
Ga0137383_110892682	3300012199	Vadose Zone Soil	MVSWGWFWMTFMMLFWVVLIGAVIYVAARLGQRPPGEKHF*
Ga0137365_100088438	3300012201	Vadose Zone Soil	MHTWIDGWDWFWMTLMMGFWLVVLGAVIYIAVRLAQRPPTKPRAG*
Ga0137365_109762991	3300012201	Vadose Zone Soil	MSGKGVAMHTWIGGWDWLWMTLMMGFWLVVLGAVTYIAVRFAHRSPAQPTADS*
Ga0137374_1000409721	3300012204	Vadose Zone Soil	MHWMNGSDWAWMTFMIVFWVVLLGAVVYAAVRLAHRPPREGRS*
Ga0137374_1000531310	3300012204	Vadose Zone Soil	MTLMMGFWLVVLGAVIYLAVRLAQRPPTNPRAGS*
Ga0137374_1000647415	3300012204	Vadose Zone Soil	MHGWMNGWDWFWMSFMMAFWVVFLGAVVYVAVRLATRAPREKHL*
Ga0137374_100222019	3300012204	Vadose Zone Soil	MHAWINGWDWLWMTFMMGFWIVLLGAVVYFAVRFAQRPPTKPRAGS*
Ga0137374_100332002	3300012204	Vadose Zone Soil	MHTTWMNGWDWLWMTLMMGFWLVVLGAVIYIAVRLAHRSPAQPRADS*
Ga0137374_100397737	3300012204	Vadose Zone Soil	MYHWMNGWAWYWMSFVMAFWVVVLGVVVYVAVRLAQRPPDGTRS*
Ga0137374_100481895	3300012204	Vadose Zone Soil	MHTWMDGWDWFWMTLMMGSWLVVLGAVIYIAVRLAQRPPTKPRADSTK*
Ga0137374_100745296	3300012204	Vadose Zone Soil	MHWTDGLDWVWMTFMMGFWIIFLGAIVYIAVRLAQRPPTNPRAGS*
Ga0137374_100824032	3300012204	Vadose Zone Soil	MYGWMDGWGWLWMSFTMVFWVVLLGAVVYIAVRLAQRPPTAES*
Ga0137374_102147932	3300012204	Vadose Zone Soil	MHAWIDGWDWVWMTFMMGFGIILLGAVVYIAVRVAQRPPTKPRAG*
Ga0137374_103193412	3300012204	Vadose Zone Soil	MHGWMGGWEWFWMAFMMLFGIAFLGAVVYAAVRLAQGAPRERHQ*
Ga0137374_103441732	3300012204	Vadose Zone Soil	MNGWDWVWMTFMMVWVVLLGAVVYGAIRLAQRSPRERKT*
Ga0137374_103776372	3300012204	Vadose Zone Soil	MHTWIDGWDWLWMTLMMGFWLVVLGAVIYIAVRLAQRPPTKPRAES*
Ga0137374_104442024	3300012204	Vadose Zone Soil	VAHARLDGWDWFWMVFVMLFWIAILGAVVCAAVRLARRAPRERHQ*
Ga0137374_108446652	3300012204	Vadose Zone Soil	MDGWDWFWMSSMIVFWLVVLGAVIYVAVKFATRPPSGGRSP*
Ga0137374_109466992	3300012204	Vadose Zone Soil	MHGWMDGWDWFWMAFMMLFWIAVLGAVVYAAVRLAQRAPRERHQ*
Ga0137374_109482132	3300012204	Vadose Zone Soil	MHTTWMNGWDWLWMTLMMGFWLVVLGAVIYIAVRLAHRSPAQPRAES*
Ga0137374_109499551	3300012204	Vadose Zone Soil	MHGWITGWEWFWMSFMMVFWLVAIGAVVYVAVRLARRPPPEKQQ*
Ga0137380_109810391	3300012206	Vadose Zone Soil	MHAWVDGWDWVWMTFMMVFWVVLLGAVVYIAVRLAQRPAT
Ga0137381_100429392	3300012207	Vadose Zone Soil	MYHWMDGWAWFWMTFTMVFWLVVLAAVVYVAVRLAQRPPRERRS*
Ga0137379_102555472	3300012209	Vadose Zone Soil	MHTWMDGWDWLWMTLTMGFWLVFLGAVIYIAVRLAQRPPTRPRTDS*
Ga0137372_100389636	3300012350	Vadose Zone Soil	MHAWIDGWDWFWMTLMMGFWLVVLGAVIYIAVRLAQRPPTKPRAES*
Ga0137372_101469305	3300012350	Vadose Zone Soil	FWMAFMMLFWIAVLGAVVYAAVRFAQRAPRERHE*
Ga0137372_102850722	3300012350	Vadose Zone Soil	MHTTWMNGRDWLWMTLMMGFWLVVLGALIYIAVRLAYRSPAQPRADS*
Ga0137372_107345902	3300012350	Vadose Zone Soil	MHTWVNGWDWLWMTLMMGFWLVVLGAVIFAAVRLAQRPPTKPRADS*
Ga0137372_107563471	3300012350	Vadose Zone Soil	GVSMHVWMNGWDWVWMTFLMVFWVFVLGAVVYIAVRLAQRRPPHEGKP*
Ga0137372_108928281	3300012350	Vadose Zone Soil	MHSWMNGWDWLWMTLMMGFWLVVLGAVIYIAVRLAHRPPTEPRAGS*
Ga0137367_1000188821	3300012353	Vadose Zone Soil	MNGSDWAWMTFMIVFWVVLLGAVVYAAVRLAHRPPREGRS*
Ga0137367_101414031	3300012353	Vadose Zone Soil	GWGWFWMTFMTVFWIAVLGVVVYVAVRLAQRPPHEG*
Ga0137367_101431592	3300012353	Vadose Zone Soil	MGGWDWFWMAFMMLFWIAVLGAVVYAAVRLAQRAPRERHQ*
Ga0137366_100994811	3300012354	Vadose Zone Soil	GWDWLWMTLMMGFWLVVLGAVVYIAVRLAHRSPAQPRADS*
Ga0137366_112172272	3300012354	Vadose Zone Soil	MYAWMSGWDWFWMTLMMGFWLVVVGAVIYLAVRLAHRPPTRPRADS*
Ga0137369_1000088232	3300012355	Vadose Zone Soil	MHTWMDGWDWFWMTLMMGFWLVVLGAVIYIAVRLAQRPPTKPRADSTK*
Ga0137369_101103511	3300012355	Vadose Zone Soil	QRQEKGEAMHTWIDGWDWLWMTLMMGFWLVVLGAVIYIAVRLAQRPPTKPRAES*
Ga0137369_101389495	3300012355	Vadose Zone Soil	MNGWDWVWMTFMMVFWVVLLGAVVYGAIRLAQRSPRERKT*
Ga0137369_103867591	3300012355	Vadose Zone Soil	TWIDGWDWFWMTLMMGFWLVVLGAVIYIAVRLAQRPPTKPRAG*
Ga0137369_105746581	3300012355	Vadose Zone Soil	MDGWDWVWMSFMLVFWIVLLGAVVYVAVRLAQRPPHSRS*
Ga0137369_109131872	3300012355	Vadose Zone Soil	MGGWDWFWMVFMMLFWIAVLGAVVYAAVRLAQRAPRER
Ga0137369_110978832	3300012355	Vadose Zone Soil	MHVWMNNWGWFWMTFMMIFWIALLGAVVFVAVRLAQRPPREGKQ*
Ga0137371_100491324	3300012356	Vadose Zone Soil	MHAWVDGWDWVWMTFIMGFWVVLLGAVVYIAVRRAQRPPTKPRAGS*
Ga0137371_105932311	3300012356	Vadose Zone Soil	MHIWMDGWDWLWMTLTMGFWLVFLGAVIYIAVRLAQR
Ga0137384_101561765	3300012357	Vadose Zone Soil	MHAWVDGWDWVWMTFMMGFWVVLLGAVVYIAVRLTQRPPTKPRAGS*
Ga0137368_102457844	3300012358	Vadose Zone Soil	MHGWTDGWGWFWMSFMMVFWVVVLGAVVYIAVRLAQRPRREGKS*
Ga0137368_103376631	3300012358	Vadose Zone Soil	MYGWMDGWGWLWMSFMMVFWIALLGTVVYIAVRLAQRPPAGKL*
Ga0137368_104418571	3300012358	Vadose Zone Soil	MHGWMGGWEWFSMAFMMLFGIAFLGAVVYAAVRLAQGAPRDRHQ*
Ga0137368_109142642	3300012358	Vadose Zone Soil	MHTWVDGWDWLWMTLMMGFWLVVLGAVIYIAVRLAH
Ga0137375_101039903	3300012360	Vadose Zone Soil	MHAWINGWDWLWMTLMMGFWIVLLGAVVYFAVRFAQRPPTKPRAGS*
Ga0137375_101766752	3300012360	Vadose Zone Soil	VLFGWMDGWGWLWMSFTMVFWVVLLGAVVCIAVRLAQRPPTGKS*
Ga0137375_104996081	3300012360	Vadose Zone Soil	MDGWDWFWMSSMMVFWLVVLGAVIYVAVRLANRSPTNPKTRL*
Ga0137375_106395904	3300012360	Vadose Zone Soil	MHTWVDGWDWVWMTLMMGFWLVVLGVVVFMAVRLAQRPPTKPRADS*
Ga0137375_109810232	3300012360	Vadose Zone Soil	MHTTWMNGWDWLWMTLMMGFWLVVLGAVIYIGVRLAHRSPAQPRADS*
Ga0137373_103155511	3300012532	Vadose Zone Soil	KGGAMHTTWMNGWDWLWMTLMMGFWLVVLGAVIYIAVRLAHRSPAQPRAES*
Ga0137373_104263112	3300012532	Vadose Zone Soil	MHGWMGGWEWFSMAFMMLFGIAFLGAVVYAAVRLAQGAPRERHQ*
Ga0137373_108695762	3300012532	Vadose Zone Soil	MHTTWMNGWDWLWMTLMMGFWLVVLGAVIYIAVRLAHRPPTEPRADS*
Ga0137373_109734531	3300012532	Vadose Zone Soil	MHAWVDGSDWIWMTLMMGFWVVLVGAVVYIAVRLAQRPPSKPSAGS*
Ga0157282_103827491	3300012904	Soil	MHTWIDGWGWFWMAFMMGLWVVLIGAVVYIAAWLAQRSPK*
Ga0153915_100499245	3300012931	Freshwater Wetlands	MRTWMDGWDWAWMTVMMVTWVVVVAAPVYVAVRLANRPPGDRGRS*
Ga0164298_102514973	3300012955	Soil	MDGSDWVWMTMMMGFWLVLLGAVVYIAVRLAQRPPTKSSSDS*
Ga0164303_110076931	3300012957	Soil	MDGSDWLWMTMMMGLWLVLLGAVVYITVRLVTVRLAQRPPTKPRSEYPPDTP*
Ga0120158_104959361	3300013772	Permafrost	MHVWMDGWDWVWMSFMMVVWIAVLGAAIYLVVRLAQRPPSDHKP*
Ga0075323_11296601	3300014301	Natural And Restored Wetlands	MWTDGWDWLWMSFMMVFWIVVLGAVVYVAVRLAHRPPDHRS*
Ga0167651_10756631	3300015190	Glacier Forefield Soil	MNNWGWFWMTFMVVFWVVLLGAVVFIAVRLAQRPPREGKS*
Ga0173480_101089613	3300015200	Soil	MHTWIDGWGWFWMTFMMALWVVLIGAVVYIAVRLAQRSPK*
Ga0132258_126278943	3300015371	Arabidopsis Rhizosphere	MDGWDWVWMSFMMVFWIAALGAVVYFVIRLTQRPPTDRTS*
Ga0182037_108461222	3300016404	Soil	VYGWMDSWDWIWMTFMMGFWVVLLGIVVFVAVRLGQRPP
Ga0134083_105786872	3300017659	Grasslands Soil	MHGWMSGWDWLWMSFLMVFWIAVIGGVVYAAVRLATRPPAPRSR
Ga0184608_100052123	3300018028	Groundwater Sediment	VHGWMDGWDWAWMTFMMAFWLVILGAVVYAAVRLAQRPPRKDH
Ga0184634_100095161	3300018031	Groundwater Sediment	VHWIDSWDWFWMNFMMVFWLVALGVVIYVAVKLANRPPSEGSKR
Ga0184634_101170312	3300018031	Groundwater Sediment	VHWIDSWDWFWMNFMMVFWLVALGVVIYVAVKLATRPPREGSK
Ga0184638_10040503	3300018052	Groundwater Sediment	MAGWGWFWMSFMMVFWAVVLGAVVYVAVRLAQRPTRQRHQ
Ga0184623_102898391	3300018056	Groundwater Sediment	MYWIDGWGWFWMNFMMVFWLVALGVVIYVAVKLATRPPREGSK
Ga0184637_104371461	3300018063	Groundwater Sediment	MYWMDGWDWFWMNFMMVFWLVALGVVIYVAVKLANRPPSEGSKR
Ga0184633_101043144	3300018077	Groundwater Sediment	VHWIDSWDWFWMNFMMVFWLVALGVVIYVAVKLASRPPREGSKR
Ga0193701_10532771	3300019875	Soil	GWDWAWMTFMMAFWLVILGAVVYAAVRLAQRPPRKDH
Ga0209324_105206413	3300025174	Soil	MHVWMNGWDWVWMTFTMLFWVVALGVAVYVAIRLANRPPTDRR
Ga0209431_101673243	3300025313	Soil	VYHWMSGWDWLWMSFTMFAWAVVVGAVVYVAVRLASRPPDGPKAGP
Ga0209640_110349412	3300025324	Soil	MHLLADGHVWADGWDWLWMTLMMGFWVIVLGIVVYVAVRLATRPPTEPKSHS
Ga0210142_10023585	3300025552	Natural And Restored Wetlands	MYGHMTDWGWLWMSSMTAFWIVLVGAVVYIAVKLANRDTDHRRPT
Ga0209483_10826812	3300025862	Arctic Peat Soil	MNSGSDWVWMSFMMVLGVVVLGAVVYVAVRLAQRPLREHPS
Ga0307313_100130293	3300028715	Soil	MDGWDWAWMTFMMAFWLVILGAVVYAAVRLAQRPPRKDH
Ga0307315_102524981	3300028721	Soil	DVHGWMDGWDWAWMTFMMAFWLVILGAVVYAAVRLAQRPPRKDH
Ga0307316_103847412	3300028755	Soil	WDWAWMTFMMAFWLVILGDVVYAAVRLAQRPPRKDH
Ga0307289_103915981	3300028875	Soil	WWKHARRRADVHGWMDGWDWAWMTFMMAFWLVILGAVVYAAVRLAQRPPRKDH
Ga0307300_101216451	3300028880	Soil	HGWMDGWDWAWMTFMMAFWLVILGAVVYAAVRLAQRPPRKDH
Ga0307497_100441611	3300031226	Soil	MHAWMDGGDWIWMSLMMAFWVVLIGAVVFIAVRLAQRPTTKPRADS
Ga0318573_104253291	3300031564	Soil	MDSWDWIWMTFMMGFWVVLLGIVVFVAVRLGQRPPGGKPS
Ga0247727_100777852	3300031576	Biofilm	MHVWTNGWDWVWMTFMMLFWVVALGVAVYVAVKLANRPPTDRR
Ga0247727_101403941	3300031576	Biofilm	MWMNGWDWVWMTFTMLFWAVALGVAVYVAVKLANRPPTDRR
Ga0306923_111475871	3300031910	Soil	MDGWDWLWMTLMMGFWLVLLAAVIFIAVRLAQRPSSKPRAVS
Ga0318518_105123853	3300032090	Soil	KKGGAVHWMDGWDWLWMTLMMGFWLVLLAAVIFIAVRLAQRPSSKPRAVS
Ga0334722_100258923	3300033233	Sediment	LGWFWMTFMTVFWVVVLGAVIYVAVRLGQRPPRGKHS
Ga0318519_108807901	3300033290	Soil	MDGWGWLRMTFMMVFWIAVLGAVVYAAVRLAQRPPGGRRS
Ga0214472_101881173	3300033407	Soil	MYWMDGWDWFWMNFTMVFWLVALGVVIYVAVKLATRPPREGSK
Ga0364924_123884_19_141	3300033811	Sediment	MDGWDWFWMNFMMVFWLVALGVVIFVAVKLATRPPREGSK
Ga0364937_023299_581_709	3300034113	Sediment	MHWMDGWDWAWMTFMMAFWLALLGVAVYVAVKLANRPPADRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048977

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences