Metagenome / Metatranscriptome Family F048707

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048707
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	59 residues
Representative Sequence	MSALATLETGLLLGLYALLAGIWGVLWALAQLRPMPIVERSAVAAYGLHVLAAVT
Number of Associated Samples	88
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.85 %
% of genes near scaffold ends (potentially truncated)	79.59 %
% of genes from short scaffolds (< 2000 bps)	71.43 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (82.313 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (53.061 % of family members)
Environment Ontology (ENVO)	Unclassified (79.592 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (54.422 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.04% β-sheet: 0.00% Coil/Unstructured: 40.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF00115	COX1	77.55
PF00034	Cytochrom_C	4.76
PF13545	HTH_Crp_2	2.04
PF03653	UPF0093	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG1981	Protoporphyrinogen oxidase HemJ (unrelated to HemG or HemY)	Coenzyme transport and metabolism [H]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.31 %
All Organisms	root	All Organisms	17.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.31 %
cellular organisms	root	All Organisms → cellular organisms	17.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.08 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.31 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.31 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.36 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.36 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.31 %
Verrucomicrobia bacterium LP2A	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LP2A	1.36 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.36 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.31 %
Verrucomicrobia bacterium LP2A	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LP2A	1.36 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.36 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.31 %
Verrucomicrobia bacterium LP2A	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LP2A	1.36 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.36 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.31 %
Verrucomicrobia bacterium LP2A	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LP2A	1.36 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.36 %
unclassified Verrucomicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.31 %
Verrucomicrobia bacterium LP2A	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LP2A	1.36 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.36 %
Verrucomicrobium sp. 3C	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. 3C	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_100529020	Not Available	1331	Open in IMG/M
3300004633\|Ga0066395_10133684	Not Available	1238	Open in IMG/M
3300010048\|Ga0126373_12209454	Not Available	611	Open in IMG/M
3300010358\|Ga0126370_12184361	Not Available	545	Open in IMG/M
3300010360\|Ga0126372_10186793	Not Available	1708	Open in IMG/M
3300010361\|Ga0126378_11002991	Not Available	939	Open in IMG/M
3300010376\|Ga0126381_103557451	Not Available	611	Open in IMG/M
3300010376\|Ga0126381_104942871	Not Available	512	Open in IMG/M
3300010376\|Ga0126381_105091298	Not Available	503	Open in IMG/M
3300010398\|Ga0126383_11105110	Not Available	882	Open in IMG/M
3300010398\|Ga0126383_11521682	Not Available	759	Open in IMG/M
3300012948\|Ga0126375_12025972	Not Available	509	Open in IMG/M
3300012971\|Ga0126369_10645029	Not Available	1132	Open in IMG/M
3300012971\|Ga0126369_10659125	Not Available	1121	Open in IMG/M
3300012971\|Ga0126369_11391350	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300012971\|Ga0126369_11602540	Not Available	741	Open in IMG/M
3300016270\|Ga0182036_10851652	Not Available	745	Open in IMG/M
3300016270\|Ga0182036_11378172	Not Available	590	Open in IMG/M
3300016270\|Ga0182036_11816654	Not Available	516	Open in IMG/M
3300016319\|Ga0182033_11122410	Not Available	703	Open in IMG/M
3300016319\|Ga0182033_11960933	Not Available	533	Open in IMG/M
3300016357\|Ga0182032_10848198	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	774	Open in IMG/M
3300016371\|Ga0182034_11626298	Not Available	567	Open in IMG/M
3300016387\|Ga0182040_11081473	Not Available	671	Open in IMG/M
3300016404\|Ga0182037_11428260	Not Available	612	Open in IMG/M
3300016404\|Ga0182037_11802206	Not Available	547	Open in IMG/M
3300016404\|Ga0182037_12167304	Not Available	500	Open in IMG/M
3300016422\|Ga0182039_10432203	Not Available	1124	Open in IMG/M
3300016445\|Ga0182038_12053914	Not Available	518	Open in IMG/M
3300017822\|Ga0187802_10302928	Not Available	623	Open in IMG/M
3300018090\|Ga0187770_10287928	Not Available	1277	Open in IMG/M
3300021088\|Ga0210404_10843891	Not Available	524	Open in IMG/M
3300021560\|Ga0126371_12533111	Not Available	621	Open in IMG/M
3300030916\|Ga0075386_11441143	Not Available	527	Open in IMG/M
3300031231\|Ga0170824_118616811	Not Available	1055	Open in IMG/M
3300031469\|Ga0170819_11616334	Not Available	643	Open in IMG/M
3300031474\|Ga0170818_112599712	Not Available	1563	Open in IMG/M
3300031543\|Ga0318516_10193996	Not Available	1172	Open in IMG/M
3300031543\|Ga0318516_10352708	Not Available	849	Open in IMG/M
3300031545\|Ga0318541_10787064	Not Available	531	Open in IMG/M
3300031561\|Ga0318528_10671296	Not Available	555	Open in IMG/M
3300031573\|Ga0310915_10186307	Not Available	1447	Open in IMG/M
3300031573\|Ga0310915_11057824	Not Available	565	Open in IMG/M
3300031682\|Ga0318560_10457600	Not Available	691	Open in IMG/M
3300031713\|Ga0318496_10334469	Not Available	837	Open in IMG/M
3300031719\|Ga0306917_10063669	All Organisms → cellular organisms → Bacteria → Proteobacteria	2530	Open in IMG/M
3300031724\|Ga0318500_10104850	Not Available	1290	Open in IMG/M
3300031724\|Ga0318500_10222105	Not Available	910	Open in IMG/M
3300031736\|Ga0318501_10111722	Not Available	1374	Open in IMG/M
3300031744\|Ga0306918_10283658	Not Available	1272	Open in IMG/M
3300031744\|Ga0306918_10379254	Not Available	1100	Open in IMG/M
3300031744\|Ga0306918_10989668	Not Available	653	Open in IMG/M
3300031747\|Ga0318502_10721295	Not Available	603	Open in IMG/M
3300031747\|Ga0318502_10852795	Not Available	553	Open in IMG/M
3300031751\|Ga0318494_10460564	Not Available	740	Open in IMG/M
3300031765\|Ga0318554_10132186	Not Available	1413	Open in IMG/M
3300031769\|Ga0318526_10089547	Not Available	1220	Open in IMG/M
3300031770\|Ga0318521_10138163	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300031771\|Ga0318546_10019675	All Organisms → cellular organisms → Bacteria	3834	Open in IMG/M
3300031771\|Ga0318546_10247238	Not Available	1227	Open in IMG/M
3300031777\|Ga0318543_10226132	Not Available	833	Open in IMG/M
3300031778\|Ga0318498_10270320	Not Available	765	Open in IMG/M
3300031781\|Ga0318547_10254788	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300031781\|Ga0318547_10776869	Not Available	596	Open in IMG/M
3300031793\|Ga0318548_10509737	Not Available	588	Open in IMG/M
3300031795\|Ga0318557_10018140	All Organisms → cellular organisms → Bacteria → Proteobacteria	2702	Open in IMG/M
3300031796\|Ga0318576_10286918	Not Available	777	Open in IMG/M
3300031796\|Ga0318576_10288623	Not Available	774	Open in IMG/M
3300031799\|Ga0318565_10056033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1839	Open in IMG/M
3300031805\|Ga0318497_10236625	Not Available	1012	Open in IMG/M
3300031832\|Ga0318499_10008844	All Organisms → cellular organisms → Bacteria → Proteobacteria	3202	Open in IMG/M
3300031833\|Ga0310917_10622289	Not Available	733	Open in IMG/M
3300031833\|Ga0310917_11144752	Not Available	518	Open in IMG/M
3300031845\|Ga0318511_10372173	Not Available	652	Open in IMG/M
3300031846\|Ga0318512_10032360	Not Available	2249	Open in IMG/M
3300031846\|Ga0318512_10293559	Not Available	807	Open in IMG/M
3300031879\|Ga0306919_10132054	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300031880\|Ga0318544_10436583	Not Available	509	Open in IMG/M
3300031890\|Ga0306925_10177235	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LP2A	2296	Open in IMG/M
3300031890\|Ga0306925_10837664	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300031890\|Ga0306925_11139868	Not Available	785	Open in IMG/M
3300031890\|Ga0306925_11211180	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300031894\|Ga0318522_10091190	Not Available	1121	Open in IMG/M
3300031897\|Ga0318520_10820911	Not Available	584	Open in IMG/M
3300031910\|Ga0306923_10783448	Not Available	1054	Open in IMG/M
3300031910\|Ga0306923_11221109	Not Available	802	Open in IMG/M
3300031910\|Ga0306923_11303666	Not Available	770	Open in IMG/M
3300031912\|Ga0306921_10063134	All Organisms → cellular organisms → Bacteria	4230	Open in IMG/M
3300031912\|Ga0306921_10330151	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300031912\|Ga0306921_10523127	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300031912\|Ga0306921_10671548	Not Available	1193	Open in IMG/M
3300031942\|Ga0310916_11704844	Not Available	509	Open in IMG/M
3300031945\|Ga0310913_10063955	All Organisms → cellular organisms → Bacteria	2426	Open in IMG/M
3300031945\|Ga0310913_10662650	Not Available	739	Open in IMG/M
3300031946\|Ga0310910_11146991	Not Available	604	Open in IMG/M
3300031946\|Ga0310910_11542165	Not Available	509	Open in IMG/M
3300031947\|Ga0310909_11091353	Not Available	649	Open in IMG/M
3300031954\|Ga0306926_10573325	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300031981\|Ga0318531_10113227	Not Available	1201	Open in IMG/M
3300032001\|Ga0306922_10213659	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300032035\|Ga0310911_10172744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. 3C	1223	Open in IMG/M
3300032035\|Ga0310911_10584328	Not Available	648	Open in IMG/M
3300032041\|Ga0318549_10044825	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300032041\|Ga0318549_10295393	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300032043\|Ga0318556_10441238	Not Available	681	Open in IMG/M
3300032044\|Ga0318558_10122545	Not Available	1234	Open in IMG/M
3300032044\|Ga0318558_10182150	Not Available	1020	Open in IMG/M
3300032051\|Ga0318532_10008124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3146	Open in IMG/M
3300032051\|Ga0318532_10285123	Not Available	586	Open in IMG/M
3300032060\|Ga0318505_10033847	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LP2A	2106	Open in IMG/M
3300032060\|Ga0318505_10386895	Not Available	661	Open in IMG/M
3300032063\|Ga0318504_10008385	All Organisms → cellular organisms → Bacteria	3462	Open in IMG/M
3300032065\|Ga0318513_10574957	Not Available	552	Open in IMG/M
3300032076\|Ga0306924_10242840	All Organisms → cellular organisms → Bacteria → Proteobacteria	2068	Open in IMG/M
3300032076\|Ga0306924_11770153	Not Available	645	Open in IMG/M
3300032091\|Ga0318577_10077202	Not Available	1535	Open in IMG/M
3300032091\|Ga0318577_10333400	Not Available	725	Open in IMG/M
3300032094\|Ga0318540_10489540	Not Available	594	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.64%
Aquatic	Environmental → Aquatic	1.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.64%
Freshwater	Environmental → Aquatic → Freshwater	1.36%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.92%
Loam	Environmental → Terrestrial → Soil → Loam	2.04%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	82.99%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	53.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.04%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1005290201	3300004092	Bog Forest Soil	MSALATLETGLLLGLYTLLAGIWGVLWALAQFRGTPILGRSAAAAYGLHTLAALTIILWTPLGFGWKCLIVGSS
Ga0066395_101336842	3300004633	Tropical Forest Soil	MSALAILETGLLLGLYALLAGIWGVLWALAQFPKRPMYGRLAIAAYGLHALAALTIILS
Ga0126374_112469091	3300009792	Tropical Forest Soil	MNGLAALETGLLLGLYALLAGIWGVLFALAQLREMSIFRQSAA
Ga0126373_122094542	3300010048	Tropical Forest Soil	MSALATLETGLFLGFYALLAGIWGILWALGRLRPNPIFARSAVAA
Ga0126370_121843611	3300010358	Tropical Forest Soil	MSALPTLQTGLLLGLYALLAGIWGVLWALARFHKAPSFGRSAAAAYGLHTL
Ga0126372_101867933	3300010360	Tropical Forest Soil	MNALAALETGLLLGLYALLAGIWGVLFALAQLREISIFRQSATVAYGLHAVAALAIVWWTPLGLGWKCLIAGS
Ga0126378_110029911	3300010361	Tropical Forest Soil	MSGLASLETGLLLGLYALLAGIWGVLWALAQFRQTPIVGRAAAAAYGLHTLVALTIVLWAPLGSGWKCLIIRSSLV
Ga0126377_123207611	3300010362	Tropical Forest Soil	MNALATLEAALLLGLYVALAGIWGVLWTLAQLRQTALFWR
Ga0126381_1002876614	3300010376	Tropical Forest Soil	MNPLATLETGLLLGLYALLAGVWGVLWALARFRKAPSF
Ga0126381_1035574512	3300010376	Tropical Forest Soil	MSALPTLETGLLLGLYALLAGIWGVLWALARFHKAPSFGRSAAAAYGLHTLVAVA
Ga0126381_1049428711	3300010376	Tropical Forest Soil	MRALAIIETGLLLGLYALLAGTWGVFWALAQLRKTPMYGRLAIAAYGLHALAALTII
Ga0126381_1050912981	3300010376	Tropical Forest Soil	MSALAILETGLLLGLYALLAGIWGVIWALAQFHKRPMYRRLAIAAYGLHALAALTIILSTPLG
Ga0126383_111051102	3300010398	Tropical Forest Soil	MSALATLETGLLLGLYVLLAGIWGVLWALARFRATPIFRRLAGAAYGLHTLVALVIILWTPLGFGWKCLIVGSSLFFL
Ga0126383_115216821	3300010398	Tropical Forest Soil	MSALATIETGLLLGFYALLAGVWGVLWALARFRKAPSFGRSAAAAYGLHTLVAL
Ga0126375_111398142	3300012948	Tropical Forest Soil	MSALAILETGLLLGLYALLAGIWGVLWALAQFPKR
Ga0126375_120259721	3300012948	Tropical Forest Soil	MSALATLETGLLLGLYVLLAGIWGVLWALARFRATPIFRRLAGAAYGLHTLV
Ga0126369_106450292	3300012971	Tropical Forest Soil	MSALAILETGLLLGLYALLAGIWGVLWALAQFPKRPMYGRLAIAAYGLHALAALTIILSTPLGFGWK
Ga0126369_106591252	3300012971	Tropical Forest Soil	MNALATLEAGLLLGLYVALAGAWGVLWMLAQLSQTALFWRSAAAAYALHILAALAIVLGTPLGVGWKCLI
Ga0126369_113913501	3300012971	Tropical Forest Soil	MNALATLETGLLLGLYALLAGVWGVLWALSQFRQNLIFRRSAAAAAYGLHTLAALGIILWMPLGSGWKCLIVGSSLVFLALPPMT
Ga0126369_116025401	3300012971	Tropical Forest Soil	MNALATLETGLLLGLYALLAGIWGVLFALAQLHEISIFRQSATVAYGLHAITALAIVWWTPLGLGWKCLIVGSSLVFLALPPTTWR
Ga0182036_108516522	3300016270	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAAVTIVLW
Ga0182036_113781721	3300016270	Soil	MSALATLAAGLLLGLYVVLAGIWAVLWALAQFRQTAILWHSAAAAYGLHILATLAII
Ga0182036_118166541	3300016270	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRPMPIVARAAVAAYGLHVLAALIIVSWTPLGFGWKCLIVGSSLAFL
Ga0182033_111224101	3300016319	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRPMPIVARAAVAAYGLHVLAALIIV
Ga0182033_119609331	3300016319	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYALH
Ga0182032_108481983	3300016357	Soil	MSALATLAAGLLLGLYVVLAGIWAVLWALAQFRQTAILWHSAAAAYGLHILATLAIILGTPLGFGWKCLIIGCSLVFLAIPPMTW
Ga0182032_114347691	3300016357	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGS
Ga0182034_116262981	3300016371	Soil	MSALATLETGLLLGLYALLAGTWGVLWALAQLRPMPIVARAAVTAYGLHVLAALTIVLWTPLGFGWKCLIVGSSLAFLVIPPIT
Ga0182040_110814731	3300016387	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRPMPIVARAAVAAYGLHVLAALIIVSWTPLGFGWKCLIV
Ga0182037_114282602	3300016404	Soil	MSGLATLETGLLLGLYALLAGIWGILWALTQLRQTPIIGLLAAAACSS
Ga0182037_118022062	3300016404	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRSTPILARSAVAAYGLHVLAAVTIVLWTPLGFGWKCLIVGSSVAFLV
Ga0182037_121673042	3300016404	Soil	MNALASLEAALLLGLYVALAGIWGVLCTLAQLRQNALFWRSAAAAYALHTLAALAIVLGTPLGVGWKCLI
Ga0182039_100631784	3300016422	Soil	MSALATLETGLLLGLYALLAGIWGVLWALSQVRQA
Ga0182039_104322031	3300016422	Soil	MSALATLESGLLLGLYTLLAGIWGVLWALAQLRRTPLSGRSAAAAYGLH
Ga0182038_118386301	3300016445	Soil	MSPLATLETGLFLGLYALLAGIWGVLWALAQLRLMPIVAG
Ga0182038_120539142	3300016445	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRSTPILARSAVAAYGLHVLAAVIIVLWTPLGFGWKCLIVG
Ga0187802_103029282	3300017822	Freshwater Sediment	MSSLATLETGLLLGLYALLAGAWGVLWGLAQPCQTSIFGRSAAAAYGL
Ga0187770_102879282	3300018090	Tropical Peatland	MSALATLETGLLLGLYALLAGAWGVLWGLAQLCQTSILGRSAAAAYGLH
Ga0210404_108438911	3300021088	Soil	MSALAILETGLLLGLYALLAGIWGVLWALAQFRKRPMYGRLAIAAYGLHALVALTIILSTPLGSG
Ga0126371_125331112	3300021560	Tropical Forest Soil	MSALATLETGLLLGLYALLAGIWAVLWALAQLRPRRIAARSAVAAYGLHVLAAL
Ga0207862_10279053	3300027703	Tropical Forest Soil	MSALATLETGLLLGLYALLAGIWGLLWALAQFRATPIFGR
Ga0209465_101019741	3300027874	Tropical Forest Soil	MNALAALETGLLLGLYALLAGIWGVLFALAQLREMSIFRLS
Ga0075386_114411432	3300030916	Soil	MSALAILETGLLLGLYALLAGIWGVLWALAEFRQTADLWRAAAAAYGLHTVAALAIILGTPLEFGWKYLIT
Ga0170824_1186168111	3300031231	Forest Soil	MNALETLEAGLLLGLYAALAGVWGVLWALAQFRQTAGFWRAAAAAYGLHTGAALAIILGTPLVFGWKYL
Ga0170819_116163342	3300031469	Forest Soil	MNTLEILEAGLLLGLYVALAGIWGVLWAFAQFRQTAGFWRAAAAAYGLHIVAALAIILGT
Ga0170818_1125997122	3300031474	Forest Soil	MNTLEILEAGLLLGLYVALAGIWGVLWAFAQFRQTAGFWRAAAAAYGLHIVTALAVILGTPLEF
Ga0318516_101939961	3300031543	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRSTPILARSAVAAYGLHVLAAVIIVL
Ga0318516_103527082	3300031543	Soil	MSALATIEAGLLLGLYALLAGMWGVLWALAQFRKRLIYGCLAIAAYGLHSLAALTIILSTPLGSGWKCLIVVS
Ga0318541_107870641	3300031545	Soil	MSGLATLETGLLLGLYALLAGIWGILWALTQLRQAPIIGLLAAAAYGLHTLVALIIILWTPLGFGWKCLIVGSS
Ga0318528_106712961	3300031561	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAACVLHVLAA
Ga0310915_101863072	3300031573	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYA
Ga0310915_101929342	3300031573	Soil	MSPLASLETGLFLGLYALLAGIWGVLWALAQLRLMPIVAGSAVA
Ga0310915_110578242	3300031573	Soil	MSALAILETGLLLGLYALLSGIWGVLWALGQFRQNPIFGRSAVAAYGLHTLVALTIVLWTPLGFGWKCL
Ga0318555_100642791	3300031640	Soil	MSALATLETGLLLGLYALLAGIWGVLWALSQVRQAP
Ga0318574_106844422	3300031680	Soil	MSALATLETGLLLGLYALLAGIWGALWALAQLRQTPIFRGSAVA
Ga0318560_100772675	3300031682	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRPMPIVERSAVA
Ga0318560_104576001	3300031682	Soil	MSAPATLETGLLLGLYALLAGIWGVLWALAEFRETPIFGPSAIAA
Ga0318496_103344693	3300031713	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRPMPIVERSAVAAYGLHVLAAVT
Ga0306917_100636694	3300031719	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQVRQAPIFGRSAAAAYGLHILAALTIILWTPLGFGWKCLIV
Ga0306917_100947093	3300031719	Soil	MSALATLETGLLLGLYALLAGTWGVLWALAQLRPMPIVAR
Ga0318500_101048501	3300031724	Soil	MSGLASLETGLLLGLYALLAGIWGVLWALAQFRRTPIVGRSAAAAYGLH
Ga0318500_102221052	3300031724	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAAVTIVLWTPLEFGWKCLIVSSS
Ga0318501_101117221	3300031736	Soil	MSPLASLETGLFLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAACVLHVLAAVTIVLWTPLGFGWKCLIVG
Ga0306918_102836582	3300031744	Soil	MNALATLETGLLLGLYALLAGVWGVLWALAQFRQTPIFGRSAAAAYGLHTLAALTIILWTPL
Ga0306918_103792542	3300031744	Soil	MSPLATLETGLLLGLYALFAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAAVTIVLWT
Ga0306918_109896682	3300031744	Soil	MSPLASLETGLFLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAACVLHVLAAVTIVLWT
Ga0318502_101517161	3300031747	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRSTPILAR
Ga0318502_107212951	3300031747	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAEFRETPIFGPSAIAA
Ga0318502_108527952	3300031747	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRPMPIVERSAVAAYGLHVLAAVTIVSCTPLG
Ga0318492_102743492	3300031748	Soil	MSGLASLETGLLLGLYALLAGIWGVLWALAQFRRTPIVGH
Ga0318494_104605642	3300031751	Soil	MNALATLETGLLLGLYALLAGIWGVLFALAQLRERSIFRQSAAVAYGLHAVAALAIVLWTPL
Ga0318554_101321861	3300031765	Soil	MNALATLETGLLLGLYALLAGIWGVLWAVAQLRPTPIVARSAVAAYGLHAVAALAIVLWT
Ga0318526_100895471	3300031769	Soil	MNALATLETGLLLGLYALLAGIWGVLWAVAQLRPTPIVARSAVAAYGLHA
Ga0318521_101381633	3300031770	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAAVTIVLWTPLGFSWKCLIVGSSLAFL
Ga0318546_100196755	3300031771	Soil	MSGLASLETGLLLGLYALLAGIWGVLWALAQFRRTPIVGHSAAAAYGLHTLVALTIVLWTPLGSGWKCLIIGSSLFFFALP
Ga0318546_102472382	3300031771	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRSTPILARSAVAAYGLHVLAAVIIVLWT
Ga0318543_102261321	3300031777	Soil	MSAPATLETGLLLGLYALLAGIWGVLWALAEFRETPIFGPSAIAAYGLHILA
Ga0318498_102703202	3300031778	Soil	MSGLASLETGLLLGLYALLAGIWGVLWALAQFRRTPIVGRSAAAAYGLHTLVALTIVLWTPLGSGWKCL
Ga0318547_102547881	3300031781	Soil	MSALATLETGLLLGLYALLAGIWGILWALGRLRPNPIFARSAVAAYGLHMLA
Ga0318547_107768692	3300031781	Soil	MSAPATLETGLLLGLYALLAGIWGVLWALAEFRETPIFGPSAIAAYGLHILAALIIILWTPLGFGWKCLIVGSSL
Ga0318548_104212651	3300031793	Soil	MSPLASLETGLFLGLYALLAGIWGVLWALAQLRLMPI
Ga0318548_105097371	3300031793	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAEFRETPIFGPSAIAAYGLHILAALIIILWTPLGFGWKCLIVGSSL
Ga0318557_100181401	3300031795	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQVRQAPIFGRSAAAAYGLHILAALTIILWTPLGFGWKCLIVGSSLVFFVIPWM
Ga0318576_102869182	3300031796	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRSTPILARSAVAAYGLHVLAAVTIVLWTPLGA
Ga0318576_102886232	3300031796	Soil	MSAPATLETGLLLGLYALLAGIWGVLWALAEFRETPIFGPSAIAAYGLHIL
Ga0318565_100560335	3300031799	Soil	MNALATLETGLLLGLYALLAGIWGVLWAVAQLRPTPIVARSAVA
Ga0318497_102366251	3300031805	Soil	MNALATLETGLLLGLYALLAGIWGVLWAVAQLRPTPIVARSAVAAYG
Ga0318499_100088441	3300031832	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQVRQAPIFGRSAAAAYGLH
Ga0310917_104130902	3300031833	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRSTPILARSAVAA
Ga0310917_106222891	3300031833	Soil	MSALATLETGLLLGLYALLSGIWGVLWALAQFRQNPIFGRLAVAAYG
Ga0310917_108700241	3300031833	Soil	MSALATLETGLLLGLYALLAGIWGALWALAQLRQT
Ga0310917_111447522	3300031833	Soil	MSGLASLETGLLLGLYALLAGIWGVLWALAQFRRTPIVGHSAAAAYGLHTLVALTIVLWTPLGSG
Ga0318511_103721732	3300031845	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAAVTIV
Ga0318512_100323605	3300031846	Soil	MNALATLETGLLLGLYALLAGIWGVLWAVAQLRPTPIVARSAVAAYGLHAVAALAIVLWTPLGLGWKCLIVGSSLVF
Ga0318512_102935592	3300031846	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAACVLHVLAAVTIVLWTPLGFGWKCLIVGSSLAFLVIPPITWRL
Ga0306919_101320543	3300031879	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQVRQAPIFRRSAAAAYAL
Ga0306919_111595461	3300031879	Soil	MSALATLAAGLLLGLYVVLAGIWAVLWALAQFRQT
Ga0318544_104365832	3300031880	Soil	MSAPATLETGLLLGLYALLAGIWGVLWALAEFRETPIFGPSAIAAYGLHILAALIIILW
Ga0306925_101772353	3300031890	Soil	MSGLASLETGLLLGLYALLAGIWGVLWALAQFRRTPIVGHSAAAAYGLHTLVALTIVLWTPLGSGWKCLIIGSSLFFFALPP
Ga0306925_108376643	3300031890	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAA
Ga0306925_111398682	3300031890	Soil	MNALATLETGLLLGLYALLAGVWGVLWALSQFRQNVIFRRSAAAAFGLHTLVALGIILWTPLGFGWKCLIVGSSLVFLA
Ga0306925_112111801	3300031890	Soil	MSALATLAAGLLLGLYVVLAGIWAVLWALAQFRQTAILWHSAAAAYGLHILATLAIILGTPLGFGWKCLII
Ga0318522_100911901	3300031894	Soil	MSGLASLETGLLLGLYALLAGIWGVLWALAQFRRTPIVGRSAAAAYGLHTL
Ga0318520_108209112	3300031897	Soil	MSALATLETGLLLGLYAFLSGIWGVLWALAQFRQNPIFGRSAVVAYGLHTLVALTI
Ga0306923_107834481	3300031910	Soil	MSALATLETGLLLGLYALLAGIWGVFWALAQLRPMRIFGHSAVAAYGLHVLATLTIVSWARLGFGWK
Ga0306923_112211092	3300031910	Soil	MSPLATLETGLFLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAAVTIVLWTPLGFSWKCLIVGSSLAFLVIPPITWRLLR
Ga0306923_113036662	3300031910	Soil	MSALATLAAGLLLGLYVVLAGIWAVLWALAQFRQTAILWHSAAAAYGLHILATLAI
Ga0306921_100631341	3300031912	Soil	MSGLASLETGLLLGLYALLAGIWGVLWALAQFRRTPIVGRSAAAAYGLHTLVALTIVLWTPLGSGWKCLIIGSSLFFFALPP
Ga0306921_103301515	3300031912	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRPMRIFAHSAVAAYGLHVLATLTIVSWARLGFGWKCLIVGSSVAFLVTP
Ga0306921_105231273	3300031912	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAAVTI
Ga0306921_106715482	3300031912	Soil	MSALATLETGLLLGLYALLAGIWGVFWALAQLRPMRIFGHSAVAAYGLHVLATLTIVSWARLGFGWKCLIVGSSVAFLVTP
Ga0306921_109446532	3300031912	Soil	MNALATLEAALLLGLYVALAGIWGVLCTLAQLRQNAL
Ga0310912_111896902	3300031941	Soil	MNALATLETGLLLGLYALLAGVWGVLWALAQFRQTPIFGR
Ga0310916_112476832	3300031942	Soil	MSPLATLETGLFLGLYALLAGIWGVLWALAQLRLMPIV
Ga0310916_117048442	3300031942	Soil	MSALATLETGLLLGLYAFLSGIWGVLWALAQFRQNPIFGRSAVVVYGLHTLVALTIVLWAPLGFGWKCLIVGGSL
Ga0310913_100639551	3300031945	Soil	MSGLASLETGLLLGLYALLAGIWGVLWALAQFRRTPIVGRSAAAAYGLHTLVALTIVLWTPLGSGWKCLIIGS
Ga0310913_106626502	3300031945	Soil	MNALATLETGLLLGLYALLAGVWGVLWALAQFRQTPIFGRSAAAAYGLHTLAALTIIL
Ga0310910_111469912	3300031946	Soil	MSALATLETGLLLGLYALLAGTWGVLWALAQLRPMPIVARAAVAAYGLHVLAALTI
Ga0310910_115421651	3300031946	Soil	MSALAILETGLLLGLYALLSGIWGVLWALGQFRQNPIFGRSAVAAYGLHTLVALTIVLWTPLGIGWKCLIVGSSLVFLALPPMTWR
Ga0310909_110913531	3300031947	Soil	MSALATLETGLFLGLYALLAGIWGILWALGRLRPNPIFARSAVAAYGLHMLAAL
Ga0306926_105733251	3300031954	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYAL
Ga0318531_101132272	3300031981	Soil	MSPLASLETGLFLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAACVLH
Ga0306922_101316181	3300032001	Soil	MSALATLETGLLLGLYALLAGIWGILWALGRLRPNPIFARSAV
Ga0306922_102136594	3300032001	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAAVTIVLWTPL
Ga0306922_106993811	3300032001	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRPMPIV
Ga0310911_101727443	3300032035	Soil	MSPLATLETGLLLGLYALFAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAAVTIVLWTPLGFSWKCLIV
Ga0310911_105078092	3300032035	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRSTP
Ga0310911_105843281	3300032035	Soil	MSALAILETGLLLGLYALLSGIWGVLWALAQFRQNPIFGRLAVAAYGLHTLVALTILLWTPLGIGWKCLIVGSSLVFLALP
Ga0310911_106325292	3300032035	Soil	MSALATLETGLLLGLYALLAGIWGALWALAQLRQTPIFR
Ga0318549_100448253	3300032041	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQVRQAPIFGRS
Ga0318549_102953933	3300032041	Soil	MSPLASLETGLFLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAACVLHVLAAVTIVLWTPLGFGWKCLIVGSSLAFLVIPPITWRLLR
Ga0318556_104412382	3300032043	Soil	MSPLATLETGLLLGLYALFAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAAVTIVLWTPLGFGWKCLI
Ga0318558_101225452	3300032044	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAAVTIVLWTPLGFSWKCL
Ga0318558_101821502	3300032044	Soil	MSPLASLETGLFLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAACVL
Ga0318532_100081241	3300032051	Soil	MNALATLETGLLLGLYALLAGIWGVLWAVAQLRPTPIVARSAVAAYGLHAVAALAIVLWTPLGLGWKCLIVG
Ga0318532_102769431	3300032051	Soil	MSALATLETGLLLGLYALLAGIWGALWALAQLRQTPI
Ga0318532_102851232	3300032051	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAAVT
Ga0318505_100338473	3300032060	Soil	MSGLATLETGLLLGLYALLAGIWGILWALTQLRQAPIIGLLAAAAYGLHTLVALIIILW
Ga0318505_103868952	3300032060	Soil	MSGLATLETGLLLGLYALLAGIWGVLWALAQFRRTPIVGHSAAAAYGLHTLVALTIVLWTPLGSGWKCLIIGSSLFFFAL
Ga0318504_100083851	3300032063	Soil	MSGLASLETGLLLGLYALLAGIWGVLWALAQFRRTPIVGRSAAAAYGLHTLVALTIVLW
Ga0318513_105749572	3300032065	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAAVTIVLWTPLGFGWKCLIVGSSL
Ga0306924_102428401	3300032076	Soil	MSALATLETGLLLGLYALLAGIWGVFWALAQLRPMRIFGHSAVAAYGLHVLATLTIVSWARLGFGWKCLIVGSSV
Ga0306924_117701532	3300032076	Soil	MSALGTLETGLLLGLYALLSGIWGVLWALAQFRQNPIFGRSAVAAYGLHTLVALTIVLWTPLGFG
Ga0318577_100772021	3300032091	Soil	MSAPATLETGLLLGLYALLAGIWGVLWALAEFRETPIFGPSAIAAYGLHILAALII
Ga0318577_103334002	3300032091	Soil	MSPLATLETGLFLGLYALLAGIWGVLWALAQLRLMPIVAGSAVAAYALHVLAAVTI
Ga0318540_104895401	3300032094	Soil	MSALATLETGLLLGLYALLAGIWGVLWALAQLRPMRIFAHSAVAAYGL
Ga0310914_111195152	3300033289	Soil	MSPLATLETGLLLGLYALLAGIWGVLWALAQLRLMPIVAGSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048707

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences