Metagenome / Metatranscriptome Family F048480

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048480
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	68 residues
Representative Sequence	MASLARRRVHLGLIAKLIGRSPIMTAGLLPRAAARRRGLLDLPAGYEAVDLFILDWLAAEALRSRRNCLPL
Number of Associated Samples	110
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	24.66 %
% of genes near scaffold ends (potentially truncated)	37.16 %
% of genes from short scaffolds (< 2000 bps)	81.08 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.054 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.405 % of family members)
Environment Ontology (ENVO)	Unclassified (37.838 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.054 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.58% β-sheet: 0.00% Coil/Unstructured: 42.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF00578	AhpC-TSA	12.84
PF10417	1-cysPrx_C	12.16
PF01663	Phosphodiest	10.14
PF08240	ADH_N	2.70
PF00909	Ammonium_transp	2.70
PF03061	4HBT	1.35
PF14539	DUF4442	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	2.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.05 %
Unclassified	root	N/A	20.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.05 %
Unclassified	root	N/A	20.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.05 %
Unclassified	root	N/A	20.95 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.68 %
Unclassified	root	N/A	20.95 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.70 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.65 %
Unclassified	root	N/A	20.95 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.95 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.57 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.38 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.70 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.68 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.38 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.70 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.68 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	0.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.38 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	2.70 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.68 %
unclassified Beijerinckia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia	0.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.38 %
Mycolicibacterium agri	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium agri	2.70 %
Beijerinckia sp. L45	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. L45	0.68 %
Rhizobium pusense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	0.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y01CK66S	Not Available	670	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10001765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5633	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1017416	Not Available	1365	Open in IMG/M
3300003505\|JGIcombinedJ51221_10010609	All Organisms → cellular organisms → Bacteria → Proteobacteria	2996	Open in IMG/M
3300004633\|Ga0066395_10200715	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300004633\|Ga0066395_10353570	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300005332\|Ga0066388_100034939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4829	Open in IMG/M
3300005332\|Ga0066388_100236212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2463	Open in IMG/M
3300005332\|Ga0066388_100399034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2021	Open in IMG/M
3300005332\|Ga0066388_100626618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1694	Open in IMG/M
3300005332\|Ga0066388_102315248	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300005332\|Ga0066388_102677607	Not Available	909	Open in IMG/M
3300005332\|Ga0066388_103318088	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300005332\|Ga0066388_103756475	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005363\|Ga0008090_15495582	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300005363\|Ga0008090_15834045	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300005434\|Ga0070709_10262482	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300005435\|Ga0070714_101965441	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005439\|Ga0070711_100098155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2126	Open in IMG/M
3300005471\|Ga0070698_102078871	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005569\|Ga0066705_10192543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1273	Open in IMG/M
3300005764\|Ga0066903_100833931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1656	Open in IMG/M
3300005764\|Ga0066903_102010084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1110	Open in IMG/M
3300005764\|Ga0066903_102539679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium agri	992	Open in IMG/M
3300005764\|Ga0066903_106265158	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300006032\|Ga0066696_10281751	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300006047\|Ga0075024_100119756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1173	Open in IMG/M
3300006047\|Ga0075024_100556491	Not Available	610	Open in IMG/M
3300006057\|Ga0075026_100225304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	996	Open in IMG/M
3300006086\|Ga0075019_10567600	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300006174\|Ga0075014_100133775	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300006175\|Ga0070712_100009615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6095	Open in IMG/M
3300006804\|Ga0079221_10533228	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300006806\|Ga0079220_10050600	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300006806\|Ga0079220_10074034	Not Available	1688	Open in IMG/M
3300006806\|Ga0079220_10391816	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300006854\|Ga0075425_101343550	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300006954\|Ga0079219_11079648	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300010048\|Ga0126373_10123472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2426	Open in IMG/M
3300010048\|Ga0126373_11330907	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300010359\|Ga0126376_10710403	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300010359\|Ga0126376_10951869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium agri	854	Open in IMG/M
3300010360\|Ga0126372_10298260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. L45	1415	Open in IMG/M
3300010361\|Ga0126378_10344259	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300010361\|Ga0126378_10439577	Not Available	1418	Open in IMG/M
3300010361\|Ga0126378_10508689	Not Available	1320	Open in IMG/M
3300010362\|Ga0126377_11332598	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300010366\|Ga0126379_10079985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2826	Open in IMG/M
3300010366\|Ga0126379_12284355	Not Available	641	Open in IMG/M
3300010376\|Ga0126381_100187431	All Organisms → cellular organisms → Bacteria	2754	Open in IMG/M
3300010376\|Ga0126381_100860758	Not Available	1303	Open in IMG/M
3300010863\|Ga0124850_1032034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1683	Open in IMG/M
3300012948\|Ga0126375_10025518	All Organisms → cellular organisms → Bacteria	2838	Open in IMG/M
3300015372\|Ga0132256_101522240	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300016270\|Ga0182036_11632283	Not Available	543	Open in IMG/M
3300016319\|Ga0182033_10503888	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300016319\|Ga0182033_11273249	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300016357\|Ga0182032_12007002	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300016387\|Ga0182040_10015749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4050	Open in IMG/M
3300016422\|Ga0182039_10857846	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300016445\|Ga0182038_10968666	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300017822\|Ga0187802_10001484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6349	Open in IMG/M
3300017823\|Ga0187818_10404263	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300017927\|Ga0187824_10116921	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300017930\|Ga0187825_10041841	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300017959\|Ga0187779_10746415	Not Available	665	Open in IMG/M
3300017974\|Ga0187777_10205826	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300018012\|Ga0187810_10447779	Not Available	547	Open in IMG/M
3300018060\|Ga0187765_10144893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1335	Open in IMG/M
3300018060\|Ga0187765_10419742	Not Available	830	Open in IMG/M
3300018433\|Ga0066667_10694360	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300020579\|Ga0210407_11084001	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300020580\|Ga0210403_10089204	All Organisms → cellular organisms → Bacteria → Proteobacteria	2493	Open in IMG/M
3300020580\|Ga0210403_11447981	Not Available	519	Open in IMG/M
3300020581\|Ga0210399_10555056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium agri	952	Open in IMG/M
3300020583\|Ga0210401_10777812	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300021420\|Ga0210394_11335356	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300021433\|Ga0210391_11143152	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300021560\|Ga0126371_10054524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3835	Open in IMG/M
3300021560\|Ga0126371_10087664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3070	Open in IMG/M
3300021560\|Ga0126371_10178474	All Organisms → cellular organisms → Bacteria	2206	Open in IMG/M
3300021560\|Ga0126371_10781880	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300021560\|Ga0126371_13589843	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300025928\|Ga0207700_10551104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1023	Open in IMG/M
3300025929\|Ga0207664_10979037	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300027070\|Ga0208365_1000485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3691	Open in IMG/M
3300027765\|Ga0209073_10091986	Not Available	1060	Open in IMG/M
3300027824\|Ga0209040_10356144	Not Available	693	Open in IMG/M
3300027874\|Ga0209465_10072397	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300027915\|Ga0209069_10402003	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300031231\|Ga0170824_106961750	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300031446\|Ga0170820_17631452	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300031543\|Ga0318516_10163978	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300031545\|Ga0318541_10010216	All Organisms → cellular organisms → Bacteria → Proteobacteria	4194	Open in IMG/M
3300031546\|Ga0318538_10151248	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300031572\|Ga0318515_10046084	Not Available	2179	Open in IMG/M
3300031573\|Ga0310915_10768940	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300031640\|Ga0318555_10313040	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300031680\|Ga0318574_10300481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	933	Open in IMG/M
3300031715\|Ga0307476_10552357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	854	Open in IMG/M
3300031718\|Ga0307474_10314225	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300031719\|Ga0306917_10034839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3275	Open in IMG/M
3300031719\|Ga0306917_11012643	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300031723\|Ga0318493_10466274	Not Available	696	Open in IMG/M
3300031724\|Ga0318500_10183299	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300031736\|Ga0318501_10133041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1268	Open in IMG/M
3300031736\|Ga0318501_10347728	Not Available	796	Open in IMG/M
3300031744\|Ga0306918_10136376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1797	Open in IMG/M
3300031744\|Ga0306918_10445549	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300031753\|Ga0307477_10042736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3113	Open in IMG/M
3300031754\|Ga0307475_10020057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4676	Open in IMG/M
3300031754\|Ga0307475_10304741	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300031796\|Ga0318576_10102425	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300031797\|Ga0318550_10262533	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300031797\|Ga0318550_10416508	Not Available	650	Open in IMG/M
3300031799\|Ga0318565_10492915	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300031819\|Ga0318568_10462712	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300031819\|Ga0318568_10605662	Not Available	682	Open in IMG/M
3300031823\|Ga0307478_10284443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	1351	Open in IMG/M
3300031835\|Ga0318517_10211836	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300031845\|Ga0318511_10148480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1024	Open in IMG/M
3300031859\|Ga0318527_10412688	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300031890\|Ga0306925_11938573	Not Available	558	Open in IMG/M
3300031894\|Ga0318522_10011942	All Organisms → cellular organisms → Bacteria	2645	Open in IMG/M
3300031910\|Ga0306923_10246719	Not Available	2042	Open in IMG/M
3300031912\|Ga0306921_11621705	Not Available	702	Open in IMG/M
3300031941\|Ga0310912_11223198	Not Available	571	Open in IMG/M
3300031942\|Ga0310916_11187707	Not Available	631	Open in IMG/M
3300031959\|Ga0318530_10216657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium agri	787	Open in IMG/M
3300031981\|Ga0318531_10185118	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300032035\|Ga0310911_10094992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1627	Open in IMG/M
3300032039\|Ga0318559_10036613	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300032044\|Ga0318558_10041659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1995	Open in IMG/M
3300032055\|Ga0318575_10170930	Not Available	1086	Open in IMG/M
3300032059\|Ga0318533_10999530	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300032060\|Ga0318505_10400645	Not Available	649	Open in IMG/M
3300032063\|Ga0318504_10052756	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300032064\|Ga0318510_10081920	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300032065\|Ga0318513_10665377	Not Available	510	Open in IMG/M
3300032068\|Ga0318553_10527452	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300032076\|Ga0306924_10771237	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300032174\|Ga0307470_10623835	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300032180\|Ga0307471_100138694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2311	Open in IMG/M
3300033290\|Ga0318519_10321897	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300033290\|Ga0318519_10610240	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300033290\|Ga0318519_10669202	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.97%
Host-Associated	Host-Associated	1.35%
Engineered	Engineered	0.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.86%
Aquatic	Environmental → Aquatic	8.11%
Plants	Host-Associated → Plants	1.35%
Solid Waste	Engineered → Solid Waste	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.86%
Freshwater	Environmental → Aquatic → Freshwater	4.05%
Sediment	Environmental → Aquatic → Sediment	4.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.35%
Grass	Engineered → Solid Waste → Grass	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.27%
Loam	Environmental → Terrestrial → Soil → Loam	16.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.05%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%
Composting	Engineered → Solid Waste → Grass → Composting	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.05%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.05%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.03%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.41%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.05%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.35%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.35%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_03243730	2170459021	Switchgrass, Maize And Mischanthus Litter	MAFLARRRVHLGLIAKLIERSPVAAAGLLPGAAARRRASLDLPAGYEAVDVFILDWLAAEGLRHRRNYLPL
AF_2010_repII_A1DRAFT_100017653	3300000597	Forest Soil	MHRRVHLGLIATLIGYSPIMCAGLLPGAASRRGSLDLPAGYEAVDIYVLDWLAAEAGRSRRNYLPL*
AF_2010_repII_A100DRAFT_10174163	3300000655	Forest Soil	MASSMHRRVHLGLIATLIGYSPIMCAGLLPGAASRRGSLDLPAGYEAVDIYVLDWLAAEAGRSRRNYLPL*
JGIcombinedJ51221_100106091	3300003505	Forest Soil	MTFSVRRRVHVGLIARLIERSPIAAAGLLPRGAARRRAFLDLPAGYEAVDLFILDWLAVEALRSRRNHLPL*
Ga0066395_102007152	3300004633	Tropical Forest Soil	MASSMHRRVHLGLIATLIGYSPIMCAGLSPGAASRRGSLDLPAGYEAVDVYVLDWLAAEAGRSRRNYLPL*
Ga0066395_103535702	3300004633	Tropical Forest Soil	MASLARRRVQLGLIIKLIERSPIVARGFLPHAAAWRRRALDLPTGYDAIDVFVLDWLAGEAVRGHHKYLPL*
Ga0066388_1000349392	3300005332	Tropical Forest Soil	MATLARRKVHLGLIAKLIGCSPIVSAGLLPRAASRGRRSLDLPAGYEAVDRFILDWLAHEALRSRRNYLPL*
Ga0066388_1002362122	3300005332	Tropical Forest Soil	MASLAHRRVHLGLIAKLIGRSPIMTAGLLPGAAARRRGSLDLPAGYEAVDVFILDWLAAEGLRSRRNYLPI*
Ga0066388_1003990342	3300005332	Tropical Forest Soil	MATLARRPLGLIAKLIGRSPIVSAGFLPHAAARRRGMLDLPPGYEAVDRFILDWLAAEGLRGRRNYRPL*
Ga0066388_1006266182	3300005332	Tropical Forest Soil	MSFAHRRLHLGLITELIGRSTIMTAGLLPRAAARRRGSLDLPAGYEAVDVFILDWLAAEGLRSRRNYLPV*
Ga0066388_1023152481	3300005332	Tropical Forest Soil	RRVHLGLIAKLIERSPVVAAGLMPRATARRRASLDLPAGYEAVDVFILDWLAAEALRHRRNFLPL*
Ga0066388_1026776072	3300005332	Tropical Forest Soil	MASSARRRLHLSLIAKLIGRSPITTVGLLPRATSRRRGSFDLPPGYESVDLFILEWLAAEALRGRRNYLPL*
Ga0066388_1033180881	3300005332	Tropical Forest Soil	MASLARRRVQLGLIIKLIERSPIMARGFLPHAAAWRRRALDLPAGYDALDVFVLDWLAGEAVRGRHKYLPL*
Ga0066388_1037564752	3300005332	Tropical Forest Soil	MASLARRRVHLGLIAKLIERSPIVARGLLPHAAAPRRGGSRDLPAGYDEIDIFILDWLAGEALRGRHKYLPL*
Ga0008090_154955822	3300005363	Tropical Rainforest Soil	MIMASLARRRGHLGLIARLIGRSPIVTVGLLPRAKRPALDLPADYEVVDLFILQWIAAEALRRRRRYLRH*
Ga0008090_158340452	3300005363	Tropical Rainforest Soil	MASLARSRVHLGLIAKLIERSPIVARGLLPHAAAPRRGGSRDLPAGYDEIDVFILDWLAGEALRGRHKYLPL*
Ga0070709_102624822	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAFLARRRVHLGLIAKLIERSPVVAAGLLARRRAPSDLPAGYEAVDVFILDWLAAEALRHRRNYLPL*
Ga0070714_1019654411	3300005435	Agricultural Soil	MAFLARRHAHLGLIAKLIERSPVVAAGLLARRRAPSDLPAGYEAVDVFILDWLAAEALRHRRNYLPL*
Ga0070711_1000981551	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LIAKLIGCSPVMSAGLLPRAAARRRGSLDLPAGYEAVDRFILDWLADEALRSRRNYLPL*
Ga0070698_1020788711	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MATLARRPVHLGLIAKLIGRSPIVSAGFSARAAARRSGMPDLPPGYEAVDLFIFDWLAAEALRGRRNYLPL*
Ga0066705_101925432	3300005569	Soil	MASLARGRVHLGLIAKLIERSPIAAPGFLSRVAGRRRHSRDLPAGYEAVDVFILDWLAAEALRGHRNYLPL*
Ga0066903_1008339312	3300005764	Tropical Forest Soil	MALLARRRVHLGLITKLIERSPVVVAGLSPRATARRRASLDLPAGYEAVDVFILDWLAAEALRHRRNFLPL*
Ga0066903_1020100842	3300005764	Tropical Forest Soil	MSFARRRLHLGLITELIGRSTIMTAGLLPRAAARRRGSLDLPAGYEAVDVFILDWLAAEGLRSRRNCLPV*
Ga0066903_1025396793	3300005764	Tropical Forest Soil	MASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVRSRRNYLPL*
Ga0066903_1062651581	3300005764	Tropical Forest Soil	EPARTAIMASLARRRVHLGLIAKLIERSPIVARGLLPHAAAPRRGGSRDLPAGYDEIDIFILDWLAGEALRGRHKYLPL*
Ga0066696_102817511	3300006032	Soil	MASLARGRVHLGLIAKLIERSPIAAPGFLSRVAGRRRHSRDLPAGYEAVDVFILDWLAAEALRGRRNYLPL*
Ga0075024_1001197562	3300006047	Watersheds	MATLARRKVHLGLIARLIGCSPITSAGLLPRAAARRRGSLDLPAGYEAVDRFVLDWLAAEALRSRRNYLPL*
Ga0075024_1005564911	3300006047	Watersheds	MTFSVRRRVHVGLIARLIERSPIAAAGLSPRGAARRRAFLDLPAGYEAVDLFILDWLAVEALRSRRNHLPL*
Ga0075026_1002253043	3300006057	Watersheds	MATLARRKVHLGLIARLIGCSPITSAGLLPRAAARRRGSLDLPAGYEAVDRFVLDWLAAEALRSR
Ga0075019_105676002	3300006086	Watersheds	MASLARRRVHLGLIAKLIGRSPIMTAGLLPHTAARRRGSLDLPAGYEAVDLFILDWLAAE
Ga0075014_1001337751	3300006174	Watersheds	AAIMTFSVRRRVHVGLIARLIERSPIAAAGLLPRGAARRRAFLDLPAGYEAVDLFILDWLAVEALRSRRNHLPL*
Ga0070712_1000096156	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MANLACRKVHLGLIAKLIGCSPVMSAGLLPRAAARRRGSLDLPAGYEAVDRFILDWLADEALRSRRNYLPL*
Ga0079221_105332281	3300006804	Agricultural Soil	GLIAKLIERSPVVAAGLLARRRAPSDLPAGYEAVDVFILDWLAAEALRHRRNYLPL*
Ga0079220_100506002	3300006806	Agricultural Soil	MASLARRHGRLGLIARLLGRSPIVTTGAFRRAARPEPLDLPAGYEAVDLYILQWIAAEGLRSRRNCLPL*
Ga0079220_100740343	3300006806	Agricultural Soil	MATLARRPVHLGFIAKLIGRSPIVSAGFSRRAAARRSGMPDLPPGYEAVDLFVLDWLAAEALRGRRNYLPL*
Ga0079220_103918161	3300006806	Agricultural Soil	HGRLGMIARLIGRSPITMAGRLLRPARYGALDLPPGYEAVDLFILQWIAADALRCRSKYPPL*
Ga0075425_1013435502	3300006854	Populus Rhizosphere	MATLARRPVHLGFIAKLIGRSPIVSAGFSQRAAARRSGMPDLPPGYEAVDLFIFDWLAAEALRGRRNYLPL*
Ga0079219_110796481	3300006954	Agricultural Soil	MASLARRRVHLGLIAKLIEHSPIAATGFLPLTAARRRHSPDLPAGYDAVDVFILDWLAGEALRGRRNYLPL*
Ga0126373_101234724	3300010048	Tropical Forest Soil	LGLIIKLIECSPIVARGFLPHAAAWRRRALDLPTGYDAIDVFVLDWLAGEAVRGHHKYLPL*
Ga0126373_113309072	3300010048	Tropical Forest Soil	LARRRGHLGLIARLIGRSPIVTVGLLPRAKRPALDLPADYEAVDLFILQWIAAEALRRRRRYLPL*
Ga0126376_107104032	3300010359	Tropical Forest Soil	HRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVRSRRNYLPL*
Ga0126376_109518691	3300010359	Tropical Forest Soil	MASSMHRRVHLGLIATLIGYSPIMCAGLSPGAASRRGSLDLPAGYEAVDVYVLDWLAAEAGRSRRNYLP
Ga0126372_102982602	3300010360	Tropical Forest Soil	LIAKLIGRSPIMTAGLLPGAAARRRGSLDLPAGYEAVDVFILDWLAAEGLRSRRNYLPI*
Ga0126378_103442592	3300010361	Tropical Forest Soil	MASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLATEAVRSRRNYLPL*
Ga0126378_104395772	3300010361	Tropical Forest Soil	LGLIAKLIERSPIVARGLLPHAAAPRRGGSRDLPAGYDEIDIFILDWLAGEALRGRHKYLPL*
Ga0126378_105086891	3300010361	Tropical Forest Soil	LGLIIKLIERSPIVARGFLPHAAAWRRRALDLPAGYDAIDVFVLDWLAGEAVRGRHKYLPL*
Ga0126377_113325981	3300010362	Tropical Forest Soil	IEHGQQFVMASLARRRVHLGLIAKLIGRSPLTTTGLLPRATARRRGLLDLPPGYEAIDLFILDWLAAEALRGRRNYLPL*
Ga0126379_100799852	3300010366	Tropical Forest Soil	MASSMHRRVHLGLIATLIGYSPIMCAGRSPGAASRRGSLDLPAGYEAVDVYVLDWLAAEAGRSRRNYLPL*
Ga0126379_122843551	3300010366	Tropical Forest Soil	MASLAHRRVHLGLIAKLIGRSPIMTAGLLPGAAARCRGSLDLPAGYEAVDVFILDWL
Ga0126381_1001874312	3300010376	Tropical Forest Soil	LGLIIKLIERSPIVARGFLPHAAAWRRRALDLPTGYDAIDVFVLDWLAGEAVRGHHKYLPL*
Ga0126381_1004678793	3300010376	Tropical Forest Soil	LIAKLIGRSPITTTGLLPRATARRRGLLDLPPGYEAIDLFILDWLAAEALRGRR
Ga0126381_1008607583	3300010376	Tropical Forest Soil	LGLIIKLIERSPIVARGFLPHAAAWRRRALDLPAGYDAIDVFVLYWLAGEAVGGRHKYLPL*
Ga0124850_10320343	3300010863	Tropical Forest Soil	MASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVCSRRNYLPL*
Ga0126375_100255183	3300012948	Tropical Forest Soil	MASLARRRVHLGLIAKLIGRSPITATGLLPRATARRRGSLDLPPGYEAIDLFILDWLAAEALRGRRNYLPL*
Ga0132256_1015222401	3300015372	Arabidopsis Rhizosphere	MALLARRRVHLGLIAKLIERSPVVAAGLMPRATARHRASLDLPAGYEAVDVFILDWLAAEALRHRRNFLPL*
Ga0182036_116322831	3300016270	Soil	MASSMHRRVHLGVIATLIRYSPIMCAGLLPGAASRRGSLDLPAGYEAVDIYVLDWLAAEAGRSRRNYLPL
Ga0182033_105038881	3300016319	Soil	LMASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCILDWLAAEAVRSRRNYLPL
Ga0182033_112732492	3300016319	Soil	MASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRRSVDLPAGYEAVDVYVLDWLAAEAVRSRRNYLPL
Ga0182032_120070021	3300016357	Soil	RRAHLGLIAELIGRSPIMATGLLPRAAARRRGSLDLPAGYEAVDLFILDWLAAEALRSRRNCLPF
Ga0182040_100157494	3300016387	Soil	MASLAGRRAHLGLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAVDLFILDWLAAEALRVRRNCLPF
Ga0182040_112171041	3300016387	Soil	LITKLIERSPIMAGGLLPRAATRRGGPLDLPPGYEDVDLFILGWLA
Ga0182039_108578461	3300016422	Soil	LGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCILDWLAAEAVRSRRNYLPL
Ga0182038_109686662	3300016445	Soil	RAHLGLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAIDLFILDWLAAEALRVRRNCLPF
Ga0187802_100014845	3300017822	Freshwater Sediment	MASLARRRVHLGLIAKLIGRSPIMTAGLLPRAAARRRGLLDLPAGYEAVDLFILDWLAAEALRSRRNCLPL
Ga0187818_104042631	3300017823	Freshwater Sediment	RRRVHLGLIAKLIGRSPIMTAGLLPRAAARRRGLLDLPAGYEAVDLFILDWLAAEALRSRRNCLPL
Ga0187824_101169212	3300017927	Freshwater Sediment	LGLIAKLIGHSPIMTAGLLPRAAARHRGSLDLPAGYEAIDLFILDWLAAEASRSRRNCLP
Ga0187825_100418412	3300017930	Freshwater Sediment	MATLARRGVHLGLIAKLIKRSPVVAAGFLPRAAAHRRASLDLPAGHEAVDVFILDWLAAEGLRHRRHYLPL
Ga0187779_107464151	3300017959	Tropical Peatland	MASLARRRLHLGLIAKLIGRRSPIVASGFLPHAAERRRVRSLDLPSGYEPIDVFILDWLASEALRSRRRYLPL
Ga0187777_102058262	3300017974	Tropical Peatland	SLASRRVHLGLIAELIGHSPIVANGLLRRAATRRSPDLPAGYEAVDLFILDWLAAEAVRSRRNCLPL
Ga0187810_104477791	3300018012	Freshwater Sediment	MASLARRRVHLGLIAKLIGRSPIMTAGLLPRAAARRRGLLDLPAGYEAVDLFILDWLAAEALR
Ga0187765_101448932	3300018060	Tropical Peatland	MASLARRRVHLGLIAKLIGRSPIVASGFLPHAAARRRAGSLDLPSGYEPIDVFILEWLAGEALRGRHKYLPL
Ga0187765_104197422	3300018060	Tropical Peatland	MASLASRRVHLGLIAELIGHSPIMANGLLRRSATRRSPDLPAGYEVVDLFILDWLAAEAVRSRRNYLPL
Ga0066667_106943602	3300018433	Grasslands Soil	MASLARGRVHLGLIAKLIERSPIAAPGFLSRVAGRRRHSRDLPAGYEAVDVFILDWLAAEALRGHRNYLPL
Ga0210407_110840012	3300020579	Soil	MTFSVRRRVHVGLIARLIERSPIAAPGLLPRGAARRRAFLDLPAGYEAVDLFILDWLAVEALRSRRNHLPL
Ga0210403_100892043	3300020580	Soil	MTFSVRRRVHVGLIARLIERSPIAAAGLLPRGAARRRAFLDLPAGYEAVDLFILDWLAVEALRSRRNHLPL
Ga0210403_114479812	3300020580	Soil	MATLARRKVHLGLIARLIGCSPITSAGLLPRAAARRRGSLDLPAAYEAVDRFVLDWLAAEALRSRRNYLPL
Ga0210399_105550562	3300020581	Soil	MATLARRKVHLGLIARLIGCSPITSAGLLPRAAARRRGSLDLPAGYEAVDRFVLDWLAAEALRSRRNYLPL
Ga0210401_107778121	3300020583	Soil	VGLIARLIERSPIAAAGLLPRGAARRRAFLDLPAGYEAVDLFILDWLAVEALRSRRNHLP
Ga0210394_113353562	3300021420	Soil	MATLARRKVHLGLIARLIGCSPIVSAGLLPRAAARRRGSLDLPAGYEAVDRFVLDWLAAEALRLRRNYLPL
Ga0210391_111431522	3300021433	Soil	ARAGVMATLARRKVHLGLIARLIGCSPIVSAGLLPRAAARRRGSLDLPAGYEAVDRFVLDWLAAEALRSRRNYLPL
Ga0126371_100545242	3300021560	Tropical Forest Soil	MASLARRRVHLGLIAKLIERSPIVARGLLPHAAAPRRGGSRDLPAGYDEIDIFILDWLAGEALRGRHKYLPL
Ga0126371_100876644	3300021560	Tropical Forest Soil	MASLARRRVQLGLIIKLIERSPIVARGFLPHAAAWRRRALDLPGGYDVLDVFVLDWLAGEAVRGRHKYLPL
Ga0126371_101784741	3300021560	Tropical Forest Soil	MASSMYRRVHLGLIATLIGYSPIMCAGLLPGAASRRGSLDLPAGYEAVDIYVLDWLAAEAGRSRRNYLPL
Ga0126371_107818801	3300021560	Tropical Forest Soil	MASLARRRVQLGLIIKLIECSPIVARGFLPHAAAWRRRALDLPAGYDAIDVFVLDWLAGEAVRGRHKYLPL
Ga0126371_135898432	3300021560	Tropical Forest Soil	ITELIGRSTIMTAGLLPRAAARRRGSLDLPAGYEAVDVFILDWLAAEGLRSRRNYLPV
Ga0207700_105511042	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MATLARRPVHLGFIAKLIGRSPIVSAGFSRRAAARRSGMPDLPPGYEAVDLFVLDWLAAEALRGRRNYLPL
Ga0207664_109790371	3300025929	Agricultural Soil	MAFLARRHAHLGLIAKLIERSPVVAAGLLARRRAPSDLPAGYEAVDVFILDWLAAEALRHRRNYLPL
Ga0208365_10004852	3300027070	Forest Soil	MANLARRKVHLGLIAKLIGCSSVMSAGLLPRAAARRRGSLDLPAGYEAVDRFVLDWLAAEALRLRRNYLPL
Ga0209073_100919863	3300027765	Agricultural Soil	MATLARRPVHLGFIAKLIGRSPIVSAGFSRRAAAHRSGMPDLPPGYEAVDLF
Ga0209040_103561442	3300027824	Bog Forest Soil	MASLARRRVHLGLIAKLIGRSPIMTAGLLPRAAGRRRGSLDLPAGYEAVDLFILNWLAAEALRSRRNCLPL
Ga0209465_100723972	3300027874	Tropical Forest Soil	MASLARRRVQLGLIIKLIERSPIVARGFLPHAAAWRRRALDLPTGYDAIDVFVLDWLAGEAVRGHHKYLPL
Ga0209069_104020032	3300027915	Watersheds	MTFSVRRRVHVGLIARLIERSPIAAAGLSPRGAARRRAFLDLPAGYEAVDLFILDWLATEALRSRQNHLPL
Ga0170824_1069617502	3300031231	Forest Soil	MAFSARRRVHVGLIARLIERSPIAAAGLLPRGAARRRAFLDLPAGYEAVDLFILDWLAVEALRSRRNHLPL
Ga0170820_176314522	3300031446	Forest Soil	MAFSARRRVHVGLIARLIERSPIAAAGLLPRGAARRRAFLDLPAGYEAVDLFILDWLAAEALRSRRNHLPL
Ga0318516_101639782	3300031543	Soil	MASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVRSRRNYLPL
Ga0318541_100102162	3300031545	Soil	MASLAGRRAHLGLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAVDLFILDWLAAEALRARRNCLPF
Ga0318538_101512481	3300031546	Soil	MASLAGRRAHLGLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAIDLFILDWLAAEALRVRRNCLPF
Ga0318515_100460842	3300031572	Soil	EQGRAESVLHPARAALMASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVRSRRNYLPL
Ga0310915_107689402	3300031573	Soil	MASLAHRRVHLGLIAKLIERSPIVASGFLPHAAARRSLDLPSGYEPIDVFILDWLAGEALRSRYKYLPL
Ga0318555_103130402	3300031640	Soil	MASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVYVLDWLAAEAVRSRRNYLPL
Ga0318574_103004812	3300031680	Soil	MASFASRRAHLGLIAELIGRSPIMAIGLLPRAAARRRGSLDLPAGYEAVDLFILDW
Ga0307476_105523572	3300031715	Hardwood Forest Soil	MTFSVRRRVHVGLIARLIERSPIAAAGLLPRGAARRRAFLDLPAGYEAVDLFILDWLATETLRSRRNHLPL
Ga0307474_103142252	3300031718	Hardwood Forest Soil	MATLARRKVHLGLIARLIGCSPIVSAGLLPRAAARRRGSLDLPAGYEAVDRFVLDWLAAEALRSRRNYLPL
Ga0306917_100348395	3300031719	Soil	MASLAGRRARLGLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAIDLFILDWLAAEALRVRRNCLPF
Ga0306917_110126432	3300031719	Soil	MASFASRRAHLGLIAELIGRSPIMAIGLLPRAAARRRGSLDLPAGYEAVDLFILDWLAAEALRSRRNCLPF
Ga0318493_104662741	3300031723	Soil	MASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVRS
Ga0318500_101832992	3300031724	Soil	HLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCILDWLAAEAVRSRRNYLP
Ga0318501_101330412	3300031736	Soil	MASLAGRRAHLGLIAELIGRSPIRATSLLPHAAARRRRSPDLPVGYEAVDLFILDWLAAEALRARRNCLPF
Ga0318501_103477282	3300031736	Soil	MASSVHRRVHLGLIATLIGHSPIMCAGLLAGAASRRGSVDLPAGYEAVDVYVLDWLATEAVRSRRNYLPL
Ga0306918_101363763	3300031744	Soil	MASLAGRRAHLGLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAIDLFILDW
Ga0306918_104455491	3300031744	Soil	RRAHLGLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAVDLFILDWLAAEALRARRNCLPF
Ga0307477_100427364	3300031753	Hardwood Forest Soil	MATLARRKVHLGLIARLIGCSPIVSAGLLPSAAARRRGSLDLPAGYEAVDRFVLDWLAAEALRSRRNYLPL
Ga0307475_100200574	3300031754	Hardwood Forest Soil	MIFSVRRRVHVGLIARLIERSPIAAAGLLPRGAARRRAFLDLPAGYEAVDLFILDWLAVEALRSRRNHLPL
Ga0307475_103047411	3300031754	Hardwood Forest Soil	MATLARRKVHLGLIARLIGCSPIVSAGLLPRAAARRRGSLDLPAGYEAVDRFILDWLADEALRSRRNYLPL
Ga0318576_101024251	3300031796	Soil	VHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVYVLDWLATEAVRSRRNYLPL
Ga0318550_102625331	3300031797	Soil	MASFASRRAHLGLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAIDLFILDWLAAEALRARRNCLPF
Ga0318550_104165082	3300031797	Soil	MASLAGRRAHLGLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAIDLFILDWLAAEALRVRRN
Ga0318565_104929152	3300031799	Soil	VHRRVRLGLIATLIGHSPIMCAGLLPGAASRRGLVDLPAGYEAVDVCVLDWLAAEAVRSRRNYLPL
Ga0318568_104627122	3300031819	Soil	VMASFASRRAHLGLIAELIGRSPIMAIGLLPRAAARRRGSLDLPAGYEAVDLFILDWLAAEALRSRRNCLPF
Ga0318568_106056622	3300031819	Soil	MASLAGRRAHLGLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAIDLFIL
Ga0307478_102844432	3300031823	Hardwood Forest Soil	MTFSVRRRVHVGLIARLIERSPIAAAGLLPRGAARRRAFLDLPAGYEAVDLFILDWLATEALRR
Ga0318517_102118362	3300031835	Soil	MASLAGGRAHLCLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAIDLFILDWLAAEALRVRRNCLPF
Ga0318511_101484803	3300031845	Soil	MASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVYVFDWLAAEAVRSRRNYLPL
Ga0318527_104126881	3300031859	Soil	HLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVYVLDWLAAEAVRSRRNYLP
Ga0306925_119385732	3300031890	Soil	VGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVRSRRNYLPL
Ga0318522_100119422	3300031894	Soil	MASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCILDWLAAEAVRSRRNYLPL
Ga0306923_102467192	3300031910	Soil	LMASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVRSRRNYLPL
Ga0306921_116217052	3300031912	Soil	MASSMHRRVHLGVIATLIGYSPIMCAGLLPGAASRRGSLDLPAGYEAVDIYVLDWLAAEAGRSRRNYLPL
Ga0310912_112231981	3300031941	Soil	MASLAGRRAHLGLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAVDLFILDWLAAEAL
Ga0310916_111877071	3300031942	Soil	MASLAGRRAHLGLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAVDLFILDWLAAEALRARRNCL
Ga0318530_102166571	3300031959	Soil	MASLAGRRAHLGLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAI
Ga0318531_101851182	3300031981	Soil	MASSVHRRVHLGLIATLIGHSPIMCAGLLAGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVRSRRNYLPL
Ga0310911_100949923	3300032035	Soil	MASFASRRAHLGLIAELIGRSPIMAIGLLPRAAARRRGSLDLPAGYEAVDLFILDWLAAE
Ga0318559_100366132	3300032039	Soil	MASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLATEAVRSRRNYLPL
Ga0318558_100416592	3300032044	Soil	MASSVHRRVHVGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVRSRRNYLPL
Ga0318575_101709301	3300032055	Soil	MASLAGRRAHLDLIAELIGRSPIMATRLLPHAAARRRRSPDLPVGYEAVDLFILDWLAAEALRARRNCLPF
Ga0318533_109995301	3300032059	Soil	VLGLARAATMASLAHRRVHLGLIAKLIERSPIVASGFLPHAAARRSLDLPSGYEPIDVFILDWLAGEALRSRYKYLPL
Ga0318505_104006451	3300032060	Soil	MASLAGRRAHLGLIAELIGRAPIMATRLLPHAAARRRRSPDLPVGYEAIDLFILDWLAAEAL
Ga0318504_100527562	3300032063	Soil	ALLMASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVRSRRNYLPL
Ga0318510_100819201	3300032064	Soil	LMASSVHRRVHVGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVRSRRNYLPL
Ga0318513_106653772	3300032065	Soil	LIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVRSRRN
Ga0318553_105274522	3300032068	Soil	LEQSRAESVLHPARALLMASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVRSRRNYLPL
Ga0306924_107712371	3300032076	Soil	VARAAVMASLAGRRAHLGLIAELIGRSPIMATSLLPHAAARRRRSPDLPVGYEAVDLFILDWLAAEALRARRNCLPF
Ga0307470_106238351	3300032174	Hardwood Forest Soil	IARLIGCSPITSAGLLPRAAARRRGSLDLPAGYEAVDRFVLDWLAAEALRSRRNYLPL
Ga0307471_1001386942	3300032180	Hardwood Forest Soil	MATLARRKVHLGLIARLIGCSPITSAGLLPRAAARRRGSLDLPAVDRFVLDWLAAEALRSRRNYLPL
Ga0318519_103218972	3300033290	Soil	IAELIGRSPIMATSLLPHAAARRRRSPDLPVGYEAVDLFILDWLAAEALRARRNCLPF
Ga0318519_106102402	3300033290	Soil	MASFASRRAHLGLIAELIGRSPIMAIGLLPRAAARRRGSLDLPAGYEAVD
Ga0318519_106692021	3300033290	Soil	LLMASSVHRRVHLGLIATLIGHSPIMCAGLLPGAASRRGSVDLPAGYEAVDVCVLDWLAAEAVRSRRNYLPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048480

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences