Metagenome / Metatranscriptome Family F048448

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048448
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	65 residues
Representative Sequence	MRPATVYYLAQVWSPRTNRQFQRNDAPPCTASRPRHARVPRRDRPGRGLLTVTRRVFAMLNGTSQAA
Number of Associated Samples	88
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.14 %
% of genes near scaffold ends (potentially truncated)	34.46 %
% of genes from short scaffolds (< 2000 bps)	85.14 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.703 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.568 % of family members)
Environment Ontology (ENVO)	Unclassified (57.432 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.378 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.84% β-sheet: 0.00% Coil/Unstructured: 63.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF04978	DUF664	10.14
PF00196	GerE	5.41
PF02566	OsmC	2.70
PF01161	PBP	2.70
PF00211	Guanylate_cyc	2.03
PF08044	DUF1707	2.03
PF03537	Glyco_hydro_114	2.03
PF00903	Glyoxalase	1.35
PF13545	HTH_Crp_2	1.35
PF01695	IstB_IS21	1.35
PF16859	TetR_C_11	1.35
PF00293	NUDIX	0.68
PF13474	SnoaL_3	0.68
PF08281	Sigma70_r4_2	0.68
PF13602	ADH_zinc_N_2	0.68
PF00027	cNMP_binding	0.68
PF02036	SCP2	0.68
PF00486	Trans_reg_C	0.68
PF00270	DEAD	0.68
PF03176	MMPL	0.68
PF00589	Phage_integrase	0.68
PF13460	NAD_binding_10	0.68
PF03704	BTAD	0.68
PF07690	MFS_1	0.68
PF12697	Abhydrolase_6	0.68
PF00743	FMO-like	0.68
PF01433	Peptidase_M1	0.68
PF00300	His_Phos_1	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	2.70
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	2.70
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	2.70
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.03
COG2342	Endo alpha-1,4 polygalactosaminidase, GH114 family (was erroneously annotated as Cys-tRNA synthetase)	Carbohydrate transport and metabolism [G]	2.03
COG3868	Alpha-1,4 polygalactosaminidase, glycosyl hydrolase family GH114	Carbohydrate transport and metabolism [G]	2.03
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	1.35
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.68
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.68
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.68
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.68
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.68
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.70 %
Unclassified	root	N/A	47.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.70 %
Unclassified	root	N/A	47.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.70 %
Unclassified	root	N/A	47.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.30 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	43.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.30 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.30 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.30 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	6.08 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.03 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.35 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.68 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.68 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.68 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.68 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.68 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.68 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.30 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	5.41 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.35 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.68 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.68 %
Ornithinimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae	0.68 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.68 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.68 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.68 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.68 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.68 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.30 %
unclassified Streptosporangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae	3.38 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1.35 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	1.35 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.68 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.68 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.68 %
Planotetraspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora	0.68 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.68 %
Ornithinimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium	0.68 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.68 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.68 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.68 %
Natronosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Natronosporangium	0.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.68 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.30 %
Streptosporangiaceae bacterium NEAU-GS5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	3.38 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	1.35 %
Nonomuraea basaltis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	0.68 %
Pseudonocardia cypriaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia cypriaca	0.68 %
Kribbella pittospori	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella pittospori	0.68 %
Mycobacterium gastri	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium gastri	0.68 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	0.68 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	0.68 %
Natronosporangium hydrolyticum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Natronosporangium → Natronosporangium hydrolyticum	0.68 %
Ornithinimicrobium sediminis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → Ornithinimicrobium sediminis	0.68 %
Planotetraspora thailandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	0.68 %
Streptomyces chartreusis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces chartreusis	0.68 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.68 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.30 %
Streptosporangiaceae bacterium NEAU-GS5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	3.38 %
Nocardioides sp. zg-1230	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. zg-1230	1.35 %
Actinomadura sp. CNU-125	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	0.68 %
Blastococcus sp. URHD0036	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. URHD0036	0.68 %
Nonomuraea basaltis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	0.68 %
Pseudonocardia cypriaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia cypriaca	0.68 %
Kribbella pittospori	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella pittospori	0.68 %
Mycobacterium gastri	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium gastri	0.68 %
Natronosporangium hydrolyticum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Natronosporangium → Natronosporangium hydrolyticum	0.68 %
Ornithinimicrobium sediminis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → Ornithinimicrobium sediminis	0.68 %
Planotetraspora thailandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	0.68 %
Streptomyces chartreusis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces chartreusis	0.68 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.68 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100558513	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300005332\|Ga0066388_106879001	Not Available	572	Open in IMG/M
3300005332\|Ga0066388_107943326	Not Available	531	Open in IMG/M
3300005332\|Ga0066388_108313025	Not Available	518	Open in IMG/M
3300005363\|Ga0008090_14717224	Not Available	627	Open in IMG/M
3300005434\|Ga0070709_11593520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300005713\|Ga0066905_102043051	Not Available	532	Open in IMG/M
3300005764\|Ga0066903_100564628	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300005764\|Ga0066903_101795686	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300005764\|Ga0066903_102064235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1096	Open in IMG/M
3300005764\|Ga0066903_102928358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	925	Open in IMG/M
3300005764\|Ga0066903_105880744	Not Available	644	Open in IMG/M
3300005764\|Ga0066903_107054559	Not Available	582	Open in IMG/M
3300005764\|Ga0066903_107269990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300006175\|Ga0070712_101596126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	571	Open in IMG/M
3300006755\|Ga0079222_11941972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300006804\|Ga0079221_10029269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2318	Open in IMG/M
3300006804\|Ga0079221_10432921	Not Available	828	Open in IMG/M
3300006806\|Ga0079220_10071527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1711	Open in IMG/M
3300006806\|Ga0079220_10577701	Not Available	792	Open in IMG/M
3300006904\|Ga0075424_100336094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1609	Open in IMG/M
3300009162\|Ga0075423_10568376	Not Available	1194	Open in IMG/M
3300009792\|Ga0126374_10013787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. URHD0036	3303	Open in IMG/M
3300010043\|Ga0126380_10000259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16115	Open in IMG/M
3300010046\|Ga0126384_11317284	Not Available	670	Open in IMG/M
3300010047\|Ga0126382_11793158	Not Available	577	Open in IMG/M
3300010048\|Ga0126373_10039829	Not Available	4126	Open in IMG/M
3300010048\|Ga0126373_10845375	Not Available	978	Open in IMG/M
3300010048\|Ga0126373_11194069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	827	Open in IMG/M
3300010048\|Ga0126373_12263603	Not Available	604	Open in IMG/M
3300010048\|Ga0126373_12970592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300010358\|Ga0126370_10185928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1555	Open in IMG/M
3300010358\|Ga0126370_10254292	Not Available	1365	Open in IMG/M
3300010358\|Ga0126370_10433084	Not Available	1091	Open in IMG/M
3300010358\|Ga0126370_10738835	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300010358\|Ga0126370_10958292	Not Available	777	Open in IMG/M
3300010359\|Ga0126376_10043805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella pittospori	3127	Open in IMG/M
3300010360\|Ga0126372_10123447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	2007	Open in IMG/M
3300010361\|Ga0126378_10207448	All Organisms → cellular organisms → Bacteria	2039	Open in IMG/M
3300010361\|Ga0126378_12542436	Not Available	585	Open in IMG/M
3300010366\|Ga0126379_11124348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	891	Open in IMG/M
3300010366\|Ga0126379_11319619	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300010376\|Ga0126381_100022305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7443	Open in IMG/M
3300010376\|Ga0126381_100098452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3727	Open in IMG/M
3300010376\|Ga0126381_100344179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2059	Open in IMG/M
3300010376\|Ga0126381_100873182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1294	Open in IMG/M
3300010376\|Ga0126381_102083823	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300010376\|Ga0126381_104102774	Not Available	566	Open in IMG/M
3300010398\|Ga0126383_10618692	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300012198\|Ga0137364_10863237	Not Available	684	Open in IMG/M
3300012198\|Ga0137364_11331614	Not Available	534	Open in IMG/M
3300012971\|Ga0126369_10076070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	2961	Open in IMG/M
3300012971\|Ga0126369_12930472	Not Available	559	Open in IMG/M
3300016270\|Ga0182036_10482141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	980	Open in IMG/M
3300016294\|Ga0182041_12067167	Not Available	531	Open in IMG/M
3300016341\|Ga0182035_10317984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	1283	Open in IMG/M
3300016341\|Ga0182035_10686031	Not Available	891	Open in IMG/M
3300016341\|Ga0182035_11688174	Not Available	572	Open in IMG/M
3300016357\|Ga0182032_10093420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2103	Open in IMG/M
3300016371\|Ga0182034_10447549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1069	Open in IMG/M
3300016404\|Ga0182037_10483223	Not Available	1036	Open in IMG/M
3300016404\|Ga0182037_11264683	Not Available	650	Open in IMG/M
3300016422\|Ga0182039_10717587	Not Available	882	Open in IMG/M
3300016422\|Ga0182039_11110676	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300016445\|Ga0182038_11440415	Not Available	618	Open in IMG/M
3300021560\|Ga0126371_10232354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	1953	Open in IMG/M
3300021560\|Ga0126371_10244871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	1905	Open in IMG/M
3300021560\|Ga0126371_10507196	Not Available	1355	Open in IMG/M
3300021560\|Ga0126371_10960421	Not Available	997	Open in IMG/M
3300021560\|Ga0126371_11032781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	963	Open in IMG/M
3300021560\|Ga0126371_11735369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300021560\|Ga0126371_12722208	Not Available	600	Open in IMG/M
3300021560\|Ga0126371_13479384	Not Available	531	Open in IMG/M
3300027765\|Ga0209073_10045520	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300027874\|Ga0209465_10665324	Not Available	512	Open in IMG/M
3300031543\|Ga0318516_10005457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5788	Open in IMG/M
3300031543\|Ga0318516_10047568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2325	Open in IMG/M
3300031543\|Ga0318516_10065398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	2006	Open in IMG/M
3300031543\|Ga0318516_10101379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1627	Open in IMG/M
3300031544\|Ga0318534_10091849	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300031544\|Ga0318534_10174489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	1242	Open in IMG/M
3300031544\|Ga0318534_10248975	Not Available	1025	Open in IMG/M
3300031545\|Ga0318541_10209384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1080	Open in IMG/M
3300031545\|Ga0318541_10513459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia cypriaca	670	Open in IMG/M
3300031546\|Ga0318538_10475519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300031546\|Ga0318538_10700897	Not Available	549	Open in IMG/M
3300031549\|Ga0318571_10076307	Not Available	1055	Open in IMG/M
3300031549\|Ga0318571_10194922	Not Available	722	Open in IMG/M
3300031561\|Ga0318528_10799408	Not Available	504	Open in IMG/M
3300031564\|Ga0318573_10203822	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1049	Open in IMG/M
3300031564\|Ga0318573_10458424	Not Available	686	Open in IMG/M
3300031564\|Ga0318573_10806871	Not Available	504	Open in IMG/M
3300031679\|Ga0318561_10144257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium gastri	1276	Open in IMG/M
3300031679\|Ga0318561_10608618	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300031681\|Ga0318572_10185912	Not Available	1210	Open in IMG/M
3300031681\|Ga0318572_10653737	Not Available	626	Open in IMG/M
3300031713\|Ga0318496_10014004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces chartreusis	3864	Open in IMG/M
3300031719\|Ga0306917_11197303	Not Available	590	Open in IMG/M
3300031724\|Ga0318500_10506159	Not Available	607	Open in IMG/M
3300031736\|Ga0318501_10146464	Not Available	1213	Open in IMG/M
3300031736\|Ga0318501_10285598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. zg-1230	878	Open in IMG/M
3300031747\|Ga0318502_10085195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1729	Open in IMG/M
3300031751\|Ga0318494_10647667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → Ornithinimicrobium sediminis	618	Open in IMG/M
3300031765\|Ga0318554_10133691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	1404	Open in IMG/M
3300031765\|Ga0318554_10474032	Not Available	709	Open in IMG/M
3300031769\|Ga0318526_10204838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	806	Open in IMG/M
3300031771\|Ga0318546_10384661	Not Available	979	Open in IMG/M
3300031779\|Ga0318566_10533600	Not Available	574	Open in IMG/M
3300031781\|Ga0318547_10560990	Not Available	707	Open in IMG/M
3300031796\|Ga0318576_10369398	Not Available	678	Open in IMG/M
3300031799\|Ga0318565_10164430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Natronosporangium → Natronosporangium hydrolyticum	1077	Open in IMG/M
3300031805\|Ga0318497_10186166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300031819\|Ga0318568_10059253	Not Available	2226	Open in IMG/M
3300031819\|Ga0318568_10633669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300031819\|Ga0318568_11004800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300031835\|Ga0318517_10022017	All Organisms → cellular organisms → Bacteria	2468	Open in IMG/M
3300031835\|Ga0318517_10358961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	658	Open in IMG/M
3300031860\|Ga0318495_10141922	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1082	Open in IMG/M
3300031890\|Ga0306925_10599072	Not Available	1164	Open in IMG/M
3300031890\|Ga0306925_10714148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1048	Open in IMG/M
3300031896\|Ga0318551_10336121	Not Available	853	Open in IMG/M
3300031896\|Ga0318551_10812933	Not Available	544	Open in IMG/M
3300031897\|Ga0318520_10001432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8143	Open in IMG/M
3300031910\|Ga0306923_10171968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2474	Open in IMG/M
3300031912\|Ga0306921_10558690	Not Available	1327	Open in IMG/M
3300031941\|Ga0310912_11343373	Not Available	541	Open in IMG/M
3300031946\|Ga0310910_10413366	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1069	Open in IMG/M
3300031946\|Ga0310910_11117308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613	Open in IMG/M
3300031947\|Ga0310909_10908764	Not Available	723	Open in IMG/M
3300031954\|Ga0306926_11652743	Not Available	733	Open in IMG/M
3300032001\|Ga0306922_10996043	Not Available	865	Open in IMG/M
3300032009\|Ga0318563_10769392	Not Available	516	Open in IMG/M
3300032010\|Ga0318569_10460647	Not Available	593	Open in IMG/M
3300032025\|Ga0318507_10161818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	960	Open in IMG/M
3300032054\|Ga0318570_10030936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2122	Open in IMG/M
3300032055\|Ga0318575_10453870	Not Available	651	Open in IMG/M
3300032060\|Ga0318505_10025550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2356	Open in IMG/M
3300032063\|Ga0318504_10563441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300032065\|Ga0318513_10594316	Not Available	542	Open in IMG/M
3300032066\|Ga0318514_10107238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	1423	Open in IMG/M
3300032067\|Ga0318524_10340606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300032068\|Ga0318553_10604609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. zg-1230	574	Open in IMG/M
3300032076\|Ga0306924_11693473	Not Available	663	Open in IMG/M
3300032089\|Ga0318525_10524270	Not Available	606	Open in IMG/M
3300032094\|Ga0318540_10520793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	574	Open in IMG/M
3300032261\|Ga0306920_100573319	Not Available	1671	Open in IMG/M
3300032261\|Ga0306920_103306917	Not Available	601	Open in IMG/M
3300033289\|Ga0310914_11569812	Not Available	562	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.65%
Host-Associated	Host-Associated	1.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.65%
Plants	Host-Associated → Plants	1.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.35%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.51%
Loam	Environmental → Terrestrial → Soil → Loam	10.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.35%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.35%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.35%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.35%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1005585133	3300005332	Tropical Forest Soil	MRPATLYYLAQAWSPRTSRQFQPDDAPPCTASRGRHARVPRRDRPGRALPAITRRVLTVLNRTSQTA*
Ga0066388_1068790011	3300005332	Tropical Forest Soil	PESTMRPATVYFLAQAWAPRTNQQFQREDAPPCTASRGRHARVPRRERLGRGLPAVTRRVLAVLNGTSQVA*
Ga0066388_1079433261	3300005332	Tropical Forest Soil	MRPVTVYYLAQAWSPRTNHQFQREDAPPCPPSPGRHARVSRRDRHRPGLGAVTRRVFAMLHGTSQPA*
Ga0066388_1083130251	3300005332	Tropical Forest Soil	MRPAAVYYLAQVWSPRTSRQFQRNDAPPCTASRPRHARVPRRDRPGRGLSAVTRR
Ga0008090_147172242	3300005363	Tropical Rainforest Soil	MRPVTVYYLAQVWPPHANRQFPRHDAPPCTASRPRRARGPHRDRPGLALLTVTRRVFAVLNGTSPAV*
Ga0070709_115935201	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRPATFYYLAQAWSPRTNHQFQRDDAPPSTANRGRHARPPRRDRIGRRLPAITRRVLAMLNGTSQPA*
Ga0066905_1020430512	3300005713	Tropical Forest Soil	MRPATLYYLTQAWSPRTNRQFQQNDAPPCTASRGRHARVPRRGRPGRGLPTLTRRVLAGL
Ga0066903_1005646282	3300005764	Tropical Forest Soil	MRPVTVYYLAQVWSPRTNRQFQRNDAPPCTASRPRHARVPRRDRPGRGLLTVTRRVFAMLNGTSQAA*
Ga0066903_1017956862	3300005764	Tropical Forest Soil	WIGSPESTMRPATVYFLAQAWAPSTNHQFQREDAPPCPASPGRHARVPRRERLGRGLPAVTRRVLAVLNGTS*
Ga0066903_1020642352	3300005764	Tropical Forest Soil	MRPATIYFLAQAWSPRTKPQFQRDDAPPSPASRGRHARPPRRGRLVRGLPAVTRRIIAVLNGTSQPA*
Ga0066903_1029283582	3300005764	Tropical Forest Soil	MRLATLYYLSQAWSPRTSRQFQLDDAPPCTASRGRHARVLRRDHSGRGLPTIISRVLTVLNGTSQAA*
Ga0066903_1058807442	3300005764	Tropical Forest Soil	MRPATIYYLAQAWSPRTNHQFQREDAPPCPASPGRHARAPRRDRHRRGLPAVTRRVLAMLNSTSQPA*
Ga0066903_1070545591	3300005764	Tropical Forest Soil	MRPATIYFLAQAWSPRSNHQFQQEDAPPCPPSPGRHARVPRRDRIGRGLPVMRRVLAMLNGTSQPA*
Ga0066903_1072699901	3300005764	Tropical Forest Soil	MRPATIYYLAQIWSPGTNRQFQRDDAPPSAASRGRHARPPRRDAHRRGLSAVTRRVLAMLNGTSQPA*
Ga0070712_1015961262	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRPATIYFLAQAWSPRTNHQFQREDAPPSPASRGRHARPPRRGRLARGLPAVTRRVLAVLDGTSQPA*
Ga0079222_119419722	3300006755	Agricultural Soil	MRPAIMYYLAQAWSPRTNHQFQRDDAPPSTASRGRHARPPRRDRIGRRLPAITRRVLAMLNG
Ga0079221_100292691	3300006804	Agricultural Soil	MRPVTVYFLAQAWSPRTNHQFQREDAPPCTPSQGRHARVPRRDRHRAGLAAVTRRLLSVLNGTSQPA*
Ga0079221_104329212	3300006804	Agricultural Soil	MRPATIYYLAQAWSPRTHHQFQRDGATPCPKSPGRHARVPRRGRIGRGLPAVTHRVLAMLNGTSQPA*
Ga0079220_100715272	3300006806	Agricultural Soil	MRPATIYYLAQAWSPRTNHQFQRDDAPPSIASRGRHARPPRRDRRGLPAVTRRVLAMLNGTSQPA*
Ga0079220_105777012	3300006806	Agricultural Soil	MRPAAIYYLAQVWSPRSNHQFQRDDAPPSTAGRGRHARAPRRGPLARGLSAITRRVLAALNGTSQPA*
Ga0075424_1003360942	3300006904	Populus Rhizosphere	MRPATIYYLAQAWSPRTNHQFLRDDAPPCPASPGRHARTPRRDRHRRGLPAVTRRVLAMLNGTSQPA*
Ga0075423_105683761	3300009162	Populus Rhizosphere	MRPATIYYLAQAWSPRTNHQFQRDDAPPYIASRGRHARPPRRDRRGLPAVTRRVLAMLNGTSQPA*
Ga0126374_100137873	3300009792	Tropical Forest Soil	MPPAAVYYLAQVWSPRTNRQFQRHDAPPCTASRPRRARVPRRDRPGRGLSAVTRRVFAVLNGISHAA*
Ga0126380_1000025918	3300010043	Tropical Forest Soil	MRPATLYYLTQAWSPRTNRQFQQNDAPPCTASRGRHARVPRRGRPGQGLSTLTRRVLAALNGTAQTA*
Ga0126384_113172842	3300010046	Tropical Forest Soil	MRPATLYYLTQAWSPRTNRQFQQNDAPPCTASRGRHARVPRRGRPGRGLPILRR
Ga0126382_117931581	3300010047	Tropical Forest Soil	MRLAIVYYLSQAWSPRTNRPFQPVDAPPCTASRGRHARVPRRDRPGRGLPAITRRLLTVLNRTSQTA*
Ga0126373_100398291	3300010048	Tropical Forest Soil	MRPATLYYLAQASSPRTYRQFQQEDAPPCTASPGRHARVPRRDRPGRALPALTRRVLAVLNRTSPAA*
Ga0126373_108453751	3300010048	Tropical Forest Soil	MRPATLYYLTQAWSPRTNRQFQQNDAPPCTASRGRHARVPRRGRPGRGLPALRRRVLAALNGTAQTA*
Ga0126373_111940691	3300010048	Tropical Forest Soil	MRPATIYYLAQAWSPRTNHQFQRDDAPPSPPYRGRHARPPRRDGHRRGLSAVTRRILAVLNGTSQPA*
Ga0126373_122636032	3300010048	Tropical Forest Soil	MRPVTIYYLAQAWSPRTNHQFQREDAPPCPASPGRHARAPRRDRHRRGLPTVTRRVLAMLNGTSQPA*
Ga0126373_129705922	3300010048	Tropical Forest Soil	DSPENTMRPATIYYLAQTWSPRANHRFQREDAPPCPAARGRHARAPRRDRRGLQGVTRRVLAVLNGTSQAA*
Ga0126370_101859281	3300010358	Tropical Forest Soil	MRPAALYYLAQAWSPRTGHQFQPIDAPPCTASPRRHARLPRRDRPGRGLSAVTRRVLAVLNGTAPAA*
Ga0126370_102542922	3300010358	Tropical Forest Soil	MRLATLYYLSQAWSPRTSRQFQLDDAPPCTASRGRHARVLSRDHSGRGLPTIISRVLTVLNGTSQAA*
Ga0126370_104330841	3300010358	Tropical Forest Soil	MRPVTIYYLAQTWSPRTNHQFQREDAPPCPASRGRHARAPRRDRHRRGLPAVTRRVLAMLNGTSQPA*
Ga0126370_107388351	3300010358	Tropical Forest Soil	MRLATVYYLSQAWSPRTNRPFQPVDAPPCTASRGRHARVPRRDRPGRGLPAITRRLLTVLNGT*
Ga0126370_109582921	3300010358	Tropical Forest Soil	MRPATVYYLAQVWSPRTSRQFQRNDAPPCTASRPRHARVPRRDRPGRGLLTVTRRVFAMLNGTSQAA*
Ga0126376_100438054	3300010359	Tropical Forest Soil	MRPAALYYLAQAWSPRTNRQFQPDDAPPCTASSGRRARVPRRDRPGRALPALTRRVRAVLTGTSLAG*
Ga0126372_101234472	3300010360	Tropical Forest Soil	MRPATLYYLTQAWSPRTSRQFQQNDAPPCTASRGRHARVPRRGRPGRGLPILRRRVLAGL
Ga0126378_102074482	3300010361	Tropical Forest Soil	MRPAAVYYLAQVWSPRTNRQFQRHDAPPCTASRPRRARVPRRDRPGRGLSAVTRHVFAVLNGTSHAA*
Ga0126378_125424362	3300010361	Tropical Forest Soil	MRPVTIYYLAQAWSPRTNNQFQREDAPPCPASPGRHARAPRRDRHQRGLPAVTRRVLAMLNSTSQPA*
Ga0126379_111243481	3300010366	Tropical Forest Soil	MRPATLYYLTQAWSPRTNRQFQQNDAPPCTASRGRHARVPRRGRPGRGLPALRRRVLAALNGTAQAA*
Ga0126379_113196192	3300010366	Tropical Forest Soil	MRPVTIYFLAQAWSPRTNHQFQWEDAPPCPASPGRHARAPRRDRHRRGLPAVTR
Ga0126381_1000223056	3300010376	Tropical Forest Soil	MRPATVYYLAQAWSPRTNHQFQREDAPPSPASRGRHARPPRRGRIARGLPTIKRRVLAALNGTSQPA*
Ga0126381_1000984522	3300010376	Tropical Forest Soil	MRLVTVYCLSQAWSPPANRQFQPVDAPPCTPSRGRHARVPRRDRPGRGLPAITRRVLTVLHGTSQAA*
Ga0126381_1003441793	3300010376	Tropical Forest Soil	MRPAAVYYLAQVWSPRTNRQFQRHDAPPCTASRPRRARVPRRDRPGRGLSAVTRRVFAVLNGTSHAA*
Ga0126381_1008731821	3300010376	Tropical Forest Soil	EISSPESTMRPAALYYLAQAWSPRTGHQFQPIDAPPCTASPRRHARLPRRDRPGRGLSAVTRRVLAVLNGTAPAA*
Ga0126381_1020838231	3300010376	Tropical Forest Soil	MRPATIYFLAQAWSPRTNSEFQRDDAPPCPPSPGRHARVSRRDGIGRGLPVTRRVLAMLSGTSQPA*
Ga0126381_1041027741	3300010376	Tropical Forest Soil	MRPASLYYLSQAWPPHTNRQFQPDDAPPCPASRGRHARVPRRDRPRRALPAITRRVLTVLNR
Ga0126383_106186922	3300010398	Tropical Forest Soil	MRPVTIYFLAQAWSPRTNHQFQREDAPPCPASPSRHARAPRRDRRGLQAITRRVLAMLNGTSQPA*
Ga0137364_108632371	3300012198	Vadose Zone Soil	MRPVTIYYLAQAWSPRTNHQFQREDAPPCTPSRGRHARVPRRDRHRDGLAAVTRRLLSVLNGTSQPA*
Ga0137364_113316142	3300012198	Vadose Zone Soil	MRPATFYYLAQAWSPRTNHQFQRDDAPPSIASRGRPARPPRRDRRGLPAVTRRVLAMLNGTSQPA*
Ga0126369_100760704	3300012971	Tropical Forest Soil	MRPATVYCLAQVWSPRTNRQFQRNDAPPCTASRPRHARVPRRDRPGRGLLTVTRRVFAMLNGTSQAA*
Ga0126369_129304721	3300012971	Tropical Forest Soil	MPPAAVYYLAQVWSPRTNRQFQRHDAPPCTASRPRRARGPRRDRPGRGLPAVTRRVFAVLNGTSHA
Ga0182036_104821413	3300016270	Soil	MRLATVYYLSQAWSPRTNRQFQPVDAPPCTASRGRHARVPRRDRPRRGLPAVTRRVVAVLNGTSPAA
Ga0182041_120671671	3300016294	Soil	YYLAQAWSPRTNHQFQRDDAPPSPPYRGRHARPPRRDGHRRGLSAVTRRILAMLNGTSQP
Ga0182035_103179841	3300016341	Soil	MRPATIYYLAQTWSPRANHQFQREDAPPCPATPGRHARAPRRDRRGLQGVTRRVLAVLNGTSQPV
Ga0182035_106860311	3300016341	Soil	MRLATVYYLSQAWSPPTNRQFPPADAPPCTASRGRHARVPRRDRPRRGQPAITR
Ga0182035_116881742	3300016341	Soil	MRPATVYYLAQLWSPRTNRQFQRNDAPPRTASRPRHARVARRDRPARGPLTVTRR
Ga0182032_100934202	3300016357	Soil	MRPATVYYLAQVWSPRTNRQFQRNDAPPCTASRPRHARVPRRDRPGRGLLTVTRRVFAMLNGTSQAA
Ga0182034_104475491	3300016371	Soil	MRPATVYYLAQLWSPRTNRQFQRNDAPPCTASRPRHARVPRRPGRGLLAGTRRVLAGLNGTSQAA
Ga0182037_104832231	3300016404	Soil	MRPATFYYLAEMWPPRPNRQAQRNDAPPCTASRPRRARGPRREALGRGLLTVTRRAFAVLNGTSQAA
Ga0182037_112646831	3300016404	Soil	MRPATVYFLAQAWSPRTNHQFQRDDAPPCPASPGRHARVPRRDRIGGGLPAVTRRVLAMLNGTSQPA
Ga0182039_107175871	3300016422	Soil	MRLATVYYLAQVWSPRTNRQFQRNDAPPCTASRPRHARVPRRPGRGLLAGTRRVLAGLNGTSQAA
Ga0182039_111106761	3300016422	Soil	MRPATIYYLAQAWSPRTNHQFQRDDAPPCPASPGRHARVPRRDRTGGGLPAVTRRVLAMLNGTSQ
Ga0182038_114404151	3300016445	Soil	MRPAAVYYLAQVWSPRTNRQFQRHDAPPCTASRPRRARVPRRDRPGRGLLTVTRRVFAMLNGTSQAA
Ga0126371_102323541	3300021560	Tropical Forest Soil	MRPVTIYYLAQAWSPRTNHQFQREDAPPCPASPGRHARAPRRDRHRRGLPTVTRRVLAVLNGTSQPA
Ga0126371_102448713	3300021560	Tropical Forest Soil	MRLATAYYLSQAWSPRTNRPFQPVDAPPCTASRGRHARVPRRDRPGRGLPAITRRLLTVLNGT
Ga0126371_105071963	3300021560	Tropical Forest Soil	MRPVTIYFLAQAWSPRTNHQFQREDAPPCPASPSRHARAPRSDRHWRGPSAVTRRVLAMLNGTSQPA
Ga0126371_109604211	3300021560	Tropical Forest Soil	MRPATVYYLAQLWSPRTNRQFQRNDAPPCTASRPRHAHVPRRDHPARGPLTVTRRVFAMLNGTSQAA
Ga0126371_110327812	3300021560	Tropical Forest Soil	MRPATIYYLAQTWSPRANHQFQREDAPPCPPTPGRHARAPRRDRRGLQGVTRRVLAVLNGTSQAA
Ga0126371_117353691	3300021560	Tropical Forest Soil	MRPATIYYLAQAWSPRTNHQFQREDAPPSPASRGRHARPPRRGRIARGLPTIKRRVLAALNGTSQPA
Ga0126371_127222081	3300021560	Tropical Forest Soil	MRPASLYYLSQAWPPHTNRQFQPDDAPPCPASRGRHARVPRRDRPRRALPAITRRVLTVLNRTSQAA
Ga0126371_134793841	3300021560	Tropical Forest Soil	MRLATVYYLSQAWSLRTNRQFQPVDAPPCTASRGRHARVPRRDRPGRGLPAITR
Ga0209073_100455201	3300027765	Agricultural Soil	MRPVTVYFLAQAWSPRTNHQFQREDATPCTPSQGRHARVPRRDRHRAGLAAVTRRLLSVLNGTSQPA
Ga0209465_106653241	3300027874	Tropical Forest Soil	MRPATVYYLSQAWSPRTNRQFQPVDAPPCTASRGRHARVPRRDRPGRGLPAITRRLLTVLNGT
Ga0318516_100054572	3300031543	Soil	MRPATVYFLAQTWAPRTNQQFQREDAPPCTASRGRHARVPRRERLGRGLPAVTRRVLAVLNGT
Ga0318516_100475685	3300031543	Soil	MRPATLYYLAEEWPPRANRQVQRNDAPPCTASRPRRARGPRREALGRGLLTVTRRAFAVLNGTSQAA
Ga0318516_100653982	3300031543	Soil	MRPATVYYLAQLWSPRTNRQFQRNDAPPRTASRPRHARVARRDRPARGPLTVTRRVFAMLNGTSQAA
Ga0318516_101013792	3300031543	Soil	MNQIGSPQSTMRPATIYYLAHRTWSTGTNRQFQRDDAPPCPASRGRHARPPRRDRHRRGLPAVTRRILAMLNGTSQPA
Ga0318534_100918492	3300031544	Soil	MRPAAVYYLAQVWSPRTNRQFQRHDAPPCTASRPRRARVPRRDRPGRGLSAVTRRVFAVLNGTSHAA
Ga0318534_101744892	3300031544	Soil	MRPATVYYLAQLWSPRTNRQFQRNDAPPCTASRPRHARVPRRDRPGRGLLTVTRRVFAMLNGTSQAA
Ga0318534_102489752	3300031544	Soil	MRPATIYYLAQAWSPRTNHQFQRDDAPPSPPYRGRHARPPRRDGHRRGLSAVTRRILAMLNGTSQPA
Ga0318541_102093843	3300031545	Soil	MRPAAVYYLAQVWSPRTNRQFQRHDAPPCTASRPRRARVPRRDRPGRGLLTVT
Ga0318541_105134592	3300031545	Soil	MRPATVYFITQAWGPRTNHQFQREDAPPCTARRDRHARVLRRERLGRGLPAVTRRVLAVLNGTS
Ga0318538_104755191	3300031546	Soil	DSPESTMRPATIYYLAQAWSPRTNHQFQRDDAPPSPPYRGRHARPPRRDGHRRGLSAVTRRILAMLNGTSQPA
Ga0318538_107008971	3300031546	Soil	MRLATVYYMSQAWSPRTNRQFQPVDAPPCTASRGRHARVPRRDRPGRGLPAITLRLLTVLNGT
Ga0318571_100763071	3300031549	Soil	MPPAAVYYLARVWSPPTSRQFQRHDAPPCPASRPRRARVPRRDRPGRGLPALTRRVFAALNGTAQAA
Ga0318571_101949221	3300031549	Soil	TMRLATVYYLSQAWSPPTNRQFPPADAPPCTASRGRHARVPRRDRPRRGQPAITRRLLTVLNGT
Ga0318528_107994081	3300031561	Soil	MRLATVYYLSQAWSPRTNRQFQPDDAPPCTASRGRHARVPRRDRPGRGLPAITRRVLTVLNGTS
Ga0318573_102038222	3300031564	Soil	MRPATFYYLAEMWPPRPNRQAQRNDAPPCTASRPRRARGPRREPLGRGLLTVPRRVFAVLNG
Ga0318573_104584242	3300031564	Soil	MRLATVYYLSQAWSPRTNRQFQPDDAPPCTASRGRHARVPRRDRPGRGLPAITRRILT
Ga0318573_108068711	3300031564	Soil	MRPATVYYLSQVWSPHTGRQCQPVDAPPCTASRRRHARAPRRDRPGWGLSALTHRVLTVLNGTSQAA
Ga0318561_101442572	3300031679	Soil	MRLATVYYLSQAWSPRTNRQFQPDDAPPCTASRGRHARVPRRDRPGRGLPAITRRILTVLNGTSQAA
Ga0318561_106086181	3300031679	Soil	VYFLAQTWAPRTNQQFQREDAPPCTASRGRHARVPRRERLGRGLPAVTRRVLAVLNGT
Ga0318572_101859121	3300031681	Soil	MRPATIYYLAQAWSPRTNHQFQRDDAPPCPASPGRHARVPRRDRIGGGLPAVTRRVLAMLNGTSQPA
Ga0318572_106537372	3300031681	Soil	MRPATVYYLAQVWSPRTNRQFQRNDAPPCTASRPRHARVARRDRPARGPLTVTRRVFAMLNGTSQAA
Ga0318496_100140043	3300031713	Soil	MRLATVYYLSQAWSPPTNRQFPPADAPPCTASRGRHARVPRRDRPRRGQPAITRRLLTVLNGT
Ga0306917_111973031	3300031719	Soil	IYFLAQAWSPRTNSEFQRDDAPPCPPSPGRHARVSRRDGIGRGLPITRRVLAMLNGTSQP
Ga0318500_105061592	3300031724	Soil	MRPAAVYYLAQVWSPRTNRQFQRHDAPPCTASRPHRARVPRRDRSGRGLSAVTRRVFAVLNGTS
Ga0318501_101464642	3300031736	Soil	MRLATVYYLSQAWSPPTNRQFPPADAPPCTASRGRHARVPRRDRPGRGQPAITRRLLTVLNGT
Ga0318501_102855982	3300031736	Soil	GGQLGTYIDSPESTMRLATVYYLSQAWSPRTNRQFQPDDAPPCTASRGRHARVPRRDRPGRGLPAITRRVLTVLNGTS
Ga0318502_100851952	3300031747	Soil	MRPATVYCLAQVWSPRTNRQFQRHDAPPCTASRPRHARVPRRDRPGRGLLTVTRRVFAMLNGTSQAA
Ga0318494_106476671	3300031751	Soil	MRLATLYYLSQAWSPHTGRQCQPEDAPPCTASRGRHARAPRRDRPGRGLPALTHRVLTVLNGTSQA
Ga0318554_101336911	3300031765	Soil	MRPATVYYLAQLWSPRTNRQFQRNDAPPCTASRPRHARVARRDRPARGPLTVTRRVFAMLNGTSQAA
Ga0318554_104740321	3300031765	Soil	MRPAAVYYLAQVWSPRTNRQFQRHDAPPCTASRPRHARVPRRDRPGRGLLTVTRRVFAMLNGTSQAA
Ga0318526_102048381	3300031769	Soil	MRPAAVYYLAQVWSPRTNRQFQRHDAPPCTASRPRHARVPRRDRPGRGLLTVTRRVFAMLNGTSQ
Ga0318546_103846612	3300031771	Soil	MRLATVYYLSQAWSPPTNRQFPPADAPPCTASRGRHARVPRRDRPGRGLPAITRRVLTVLNGTS
Ga0318566_105336001	3300031779	Soil	IDSPESTMRLATVYYLSQAWSPRTNRQFQPVDAPPCTASRGRHARVPRRDRPGRGLPAITLRLLTVLNGT
Ga0318547_105609901	3300031781	Soil	MRPAAVYYLAQVWSPRTNRQFQRHDAPPCTASRPRRARVPRRDRPGRGLLTVTRRVFA
Ga0318576_103693981	3300031796	Soil	MRPATLYYLSQAWSPHTGRQCQPEDAPPCTATRRHARAPRRDRPGWGLSALTHRVLTVLNGTSQAA
Ga0318565_101644302	3300031799	Soil	MNQIGSPESTMRPATIYYLAHRTWSTGTNRQFQRDDAPPCPASRGRHARPPRRDRHRRGLPAVTRRILAMLNGTSQPA
Ga0318497_101861661	3300031805	Soil	MRPAAVYYLAQVWSPRTNRQFQRHDAPPCTASRPRRARVPRRDRPGRGLSAVTRRVFAVLNGTSH
Ga0318568_100592533	3300031819	Soil	MRLATVYYLSQAWSPRTNRQFQPVDAPPCTASRGRHARVPRRDRPGRGLPALTRRVLTVLNR
Ga0318568_106336692	3300031819	Soil	MRPATIYYLAQAWSPRTNHQFQRDDAPPSPPYRGRHARPPRRDGHRRGLSAVTRRILAML
Ga0318568_110048002	3300031819	Soil	PATIYYLAQTWSPRANHQFQREDAPPCPATPGRHARAPRRDRRGLQGVTRRVLAVLNGTSQAA
Ga0318517_100220174	3300031835	Soil	TVYFITQAWGPRTNHQFQREDAPPCTARRDRHARVLRRERLGRGLPAVTRRVLAVLNGTS
Ga0318517_103589612	3300031835	Soil	MRPAAVYYLAQVWSPRTNRQFQRHDAPPCTASRPHRARVPRRDRSGRGLSAVTRRVFAVL
Ga0318495_101419222	3300031860	Soil	MRPATLYYLAEEWPPRANRQVQRNDAPPCTASRPRRARGPRREALGRGLLTVTRR
Ga0306925_105990722	3300031890	Soil	MRLATLYYLSQAWSPHTGRQCQPEDAPPCTASRGRHARAPRRDRPGRGLPALTHRVLTVLNGTSQAA
Ga0306925_107141482	3300031890	Soil	MNQIGSPESTMRPATIYYLAQAWSPRTNQFQRDDAPPFPASRGRHARPPRRDRHRRGLPAVTRRILAMLNGTSQPA
Ga0318551_103361211	3300031896	Soil	PENTMRPATIYYLAQTWSPRANHQFQREDAPPCPATPGRHARAPRRDRRGLQGVTRRVLAVLNGTSQAA
Ga0318551_108129331	3300031896	Soil	MRPATFYYLAEMWPPRPNRQAQRNDAPPCTASRPRRARGPRREALGRGLLTVTRRAFAVLNG
Ga0318520_100014326	3300031897	Soil	MRPATIYYLAQAWSPRTNHQFQRDDAPPCPASPGRHARVPRRDRTGGGLPAVTRRVLAMLNRTSQPA
Ga0306923_101719683	3300031910	Soil	MPPAAVYYLARVWSPPTGRQFQQHDAPPCPASRPRRARVPRRDRPGRGLPALTRRVFAALNGTAQAA
Ga0306921_105586901	3300031912	Soil	MRLATVYYLSQAWSPRTNRQFQPVDAPPCTASRGRHARVPRRDRPGRGLPAITRRLLTVLNGT
Ga0310912_113433731	3300031941	Soil	MRLVTVYCVSQAWSPRTNRQFQPVDAPPCPASRGRHARVPRRDRPRRALPAITRRVLTML
Ga0310910_104133662	3300031946	Soil	MRPATLYYLAEEWPPRANRQVQRNDAPPCTASRPRRARGPRREALGRGLLTVTR
Ga0310910_111173082	3300031946	Soil	MRPATIYYLAQAWSPRTNHQFQRDDAPPSPPYRGRHARPPRRDGHRRGLSAVTRRILAMLNGT
Ga0310909_109087641	3300031947	Soil	IYYLAQAWSPRTNHQFQRDDAPPSPPYRGRHARPPRRDGHRRGLSAVTRRILAMLNGTSQPA
Ga0306926_116527431	3300031954	Soil	MRLATVYYLSQAWSPRTSRQFQPVDAPPCTASRGRHARVPRRDRPGRGQPAITRRLLTVLNGT
Ga0306922_109960431	3300032001	Soil	MRPATIYFLAQAWSPRTNSEFQRDDAPPCPPSPGRHARVSRRDGIGRGLPITRRVLAMLNGTSQPA
Ga0318563_107693921	3300032009	Soil	MRPATFYYLAEMWPPRPNRQAQRNDAPPCTASRPRRARGPRREPLGRGLLTVPRRVFAVLNGTSQAA
Ga0318569_104606471	3300032010	Soil	MRPATLYFLAQAWSPRTGQFQRHDAPPCPASRSRRTLLLRRDRPRRGLPAVTRRVVAVLNGT
Ga0318507_101618181	3300032025	Soil	MRPAAVYYLAQVWSPRTNRQFQRHDAPPCTASRPRHARVPRRDRPGRGLLTVTRRVFAMLNGTSQA
Ga0318570_100309362	3300032054	Soil	MRPATVYYLAQLWSPRTNRQFRRNDAPPRTASRPRHARVARRDRPARGPLTVTRRVFAMLNGTSQAA
Ga0318575_104538702	3300032055	Soil	TLYYLAEEWPPRANRQVQRNDAPPCTASRPRRARGPRREALGRGLLTVTRRAFAVLNGTSQAA
Ga0318505_100255503	3300032060	Soil	VYYLAQVWSPRTNLQFQRNDAPPCTASRPRRARVPRRDRPGRGLPAVTRRVFAMLNGTSQAA
Ga0318504_105634411	3300032063	Soil	MRPATIYYLAQAWSPRTNHQFQRDDAPPCPPSRGRHARVPRRERLGRGLPAVTRRVLAVLNGT
Ga0318513_105943161	3300032065	Soil	MRPAAVYYLAQVWSPPAGRQFQRHDAPPCTASRPRPARVPRRDRPGRGLPAVMRRVFAGLNDT
Ga0318514_101072383	3300032066	Soil	MRLATVYYLAQVWSPRTNRQFQRNDAPPCTASRPRHARVPRRPGRGLLAGTRCT
Ga0318524_103406061	3300032067	Soil	MRPATVYCLAQVWSPRTNRQFQRHDAPPCTASRPRHARVPRRDRPGRGLLTVTRRVFAMLNG
Ga0318553_106046092	3300032068	Soil	TYIDSPESTMRLATVYYLSQAWSPRTNRQFQPDDAPPCTASRGRHARVPRRDRPGRGLPAITRRVLTVLNGTS
Ga0306924_116934732	3300032076	Soil	MRPATLYYLSQAWSPHTNRQFQREDAPPCTASRGRHARVPRRDRPGRALPAITRRVLTVLNRTSQAA
Ga0318525_105242701	3300032089	Soil	MNQIGSPESTMRPATIYYLAQAWSPRTNQFQRDDAPPFPASRGRHARPPRRDRHRRGLPTITRRILAMLNGTSQPA
Ga0318540_105207932	3300032094	Soil	MRLATVYYLSQAWSPRTNRQFQPDDAPPCTASRGRHARVPRRDRPGRGLPAITRRVLT
Ga0306920_1005733191	3300032261	Soil	MPPAAVYYLARVWSPPTSRQFQQHDAPPCPASRPRRARVPRRDRPGRGLPALTRRVFAALNGTAQAA
Ga0306920_1033069172	3300032261	Soil	MRPATVYYLAQVWSPRTNLQFQRNDAPPCTASRPRRARVPRRDRPGRG
Ga0310914_115698121	3300033289	Soil	MPPVAVYYLARVWSPPTSRQFQQHDAPPCPASRPRRARVPRRDRPGRGLPALTRRVFAALNGTAQAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048448

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences