Metagenome / Metatranscriptome Family F048133

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048133
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	57 residues
Representative Sequence	MLTALYRAFHALSTPPLRRIVALSLALAVLTFALLWLAVAGVLYNTAFFEWRPLNWL
Number of Associated Samples	103
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	34.46 %
% of genes near scaffold ends (potentially truncated)	99.32 %
% of genes from short scaffolds (< 2000 bps)	93.92 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.838 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (55.405 % of family members)
Environment Ontology (ENVO)	Unclassified (66.216 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (49.324 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.35% β-sheet: 0.00% Coil/Unstructured: 37.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF00005	ABC_tran	16.22
PF00924	MS_channel	12.16
PF14023	DUF4239	9.46
PF12399	BCA_ABC_TP_C	6.76
PF02922	CBM_48	5.41
PF13289	SIR2_2	2.70
PF07264	EI24	0.68
PF13676	TIR_2	0.68
PF05239	PRC	0.68
PF00083	Sugar_tr	0.68
PF04343	DUF488	0.68
PF06742	DUF1214	0.68
PF02653	BPD_transp_2	0.68
PF05128	DUF697	0.68
PF08031	BBE	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	12.16
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	12.16
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.68
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	0.68
COG3768	Uncharacterized membrane protein YcjF, UPF0283 family	Function unknown [S]	0.68
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.68
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.84 %
Unclassified	root	N/A	37.16 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.84 %
Unclassified	root	N/A	37.16 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.84 %
Unclassified	root	N/A	37.16 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.54 %
Unclassified	root	N/A	37.16 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.35 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.16 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.46 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.35 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.35 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.16 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	22.30 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.38 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.35 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.68 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.68 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.16 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	11.49 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.38 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	1.35 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.68 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.68 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.16 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	10.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.38 %
Synechococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae	1.35 %
unclassified Rhodanobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → unclassified Rhodanobacteraceae	0.68 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.68 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.16 %
unclassified Acidiphilium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium	7.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.38 %
Acidiphilium angustum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium angustum	2.03 %
Synechococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	1.35 %
Rhodanobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → unclassified Rhodanobacteraceae → Rhodanobacteraceae bacterium	0.68 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.68 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.16 %
Acidiphilium sp. PM	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. PM	7.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.38 %
Acidiphilium angustum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium angustum	2.03 %
Synechococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	1.35 %
Rhodanobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → unclassified Rhodanobacteraceae → Rhodanobacteraceae bacterium	0.68 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.68 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10036323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1369	Open in IMG/M
3300004082\|Ga0062384_100431083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	857	Open in IMG/M
3300004092\|Ga0062389_101161946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	958	Open in IMG/M
3300004152\|Ga0062386_100747596	Not Available	804	Open in IMG/M
3300005332\|Ga0066388_102693929	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005536\|Ga0070697_100363056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1252	Open in IMG/M
3300006028\|Ga0070717_11456966	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300006893\|Ga0073928_11104489	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300009012\|Ga0066710_102544926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	738	Open in IMG/M
3300009090\|Ga0099827_11544570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300009137\|Ga0066709_101896000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	830	Open in IMG/M
3300009137\|Ga0066709_104278618	Not Available	520	Open in IMG/M
3300009792\|Ga0126374_11164760	Not Available	615	Open in IMG/M
3300010159\|Ga0099796_10345447	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300010358\|Ga0126370_11534589	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300010366\|Ga0126379_10635870	Not Available	1156	Open in IMG/M
3300010366\|Ga0126379_13552534	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300010376\|Ga0126381_101077568	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300010376\|Ga0126381_101164379	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300010398\|Ga0126383_12156384	Not Available	644	Open in IMG/M
3300012206\|Ga0137380_10621653	Not Available	943	Open in IMG/M
3300012362\|Ga0137361_10230185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1684	Open in IMG/M
3300012363\|Ga0137390_11788444	Not Available	546	Open in IMG/M
3300012922\|Ga0137394_11517627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	528	Open in IMG/M
3300012925\|Ga0137419_11040963	Not Available	680	Open in IMG/M
3300012930\|Ga0137407_10847423	Not Available	864	Open in IMG/M
3300012971\|Ga0126369_10366643	All Organisms → cellular organisms → Bacteria → Proteobacteria	1468	Open in IMG/M
3300016270\|Ga0182036_10523402	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300016270\|Ga0182036_11535433	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300016270\|Ga0182036_11939780	Not Available	500	Open in IMG/M
3300016319\|Ga0182033_11247279	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300016341\|Ga0182035_11670164	Not Available	575	Open in IMG/M
3300016357\|Ga0182032_10086553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2170	Open in IMG/M
3300016357\|Ga0182032_10213804	Not Available	1476	Open in IMG/M
3300016371\|Ga0182034_12054898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. PM	504	Open in IMG/M
3300016387\|Ga0182040_10680189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → unclassified Rhodanobacteraceae → Rhodanobacteraceae bacterium	840	Open in IMG/M
3300016422\|Ga0182039_10344563	Not Available	1249	Open in IMG/M
3300016422\|Ga0182039_11275683	Not Available	665	Open in IMG/M
3300016422\|Ga0182039_11593470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. PM	596	Open in IMG/M
3300017928\|Ga0187806_1387835	Not Available	502	Open in IMG/M
3300017943\|Ga0187819_10152539	All Organisms → cellular organisms → Bacteria → Proteobacteria	1376	Open in IMG/M
3300018090\|Ga0187770_11737394	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300018468\|Ga0066662_12997855	Not Available	502	Open in IMG/M
3300020580\|Ga0210403_10689838	Not Available	819	Open in IMG/M
3300020580\|Ga0210403_11524432	Not Available	502	Open in IMG/M
3300020581\|Ga0210399_10119527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2165	Open in IMG/M
3300020581\|Ga0210399_10339877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1253	Open in IMG/M
3300020581\|Ga0210399_10876820	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300020581\|Ga0210399_11555762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. PM	511	Open in IMG/M
3300021088\|Ga0210404_10020729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2824	Open in IMG/M
3300021420\|Ga0210394_11161800	Not Available	664	Open in IMG/M
3300021478\|Ga0210402_10793736	Not Available	872	Open in IMG/M
3300021560\|Ga0126371_10625725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1225	Open in IMG/M
3300021560\|Ga0126371_13120697	Not Available	561	Open in IMG/M
3300021560\|Ga0126371_13370379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300026498\|Ga0257156_1136058	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300026557\|Ga0179587_10607751	Not Available	720	Open in IMG/M
3300026999\|Ga0207949_1022194	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300028047\|Ga0209526_10199531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1386	Open in IMG/M
3300029636\|Ga0222749_10741839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. PM	537	Open in IMG/M
3300031092\|Ga0308204_10097957	Not Available	804	Open in IMG/M
3300031543\|Ga0318516_10436109	Not Available	754	Open in IMG/M
3300031545\|Ga0318541_10030668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2661	Open in IMG/M
3300031545\|Ga0318541_10175067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1183	Open in IMG/M
3300031561\|Ga0318528_10491257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	659	Open in IMG/M
3300031564\|Ga0318573_10323976	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300031564\|Ga0318573_10754207	Not Available	523	Open in IMG/M
3300031572\|Ga0318515_10721576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. PM	527	Open in IMG/M
3300031640\|Ga0318555_10406471	Not Available	738	Open in IMG/M
3300031719\|Ga0306917_10130262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	1844	Open in IMG/M
3300031719\|Ga0306917_11518452	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300031723\|Ga0318493_10104395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1426	Open in IMG/M
3300031724\|Ga0318500_10186300	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300031736\|Ga0318501_10207216	All Organisms → cellular organisms → Bacteria → Proteobacteria	1028	Open in IMG/M
3300031744\|Ga0306918_10870260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	702	Open in IMG/M
3300031747\|Ga0318502_10175832	Not Available	1231	Open in IMG/M
3300031747\|Ga0318502_10554969	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300031751\|Ga0318494_10317510	Not Available	900	Open in IMG/M
3300031763\|Ga0318537_10061369	Not Available	1372	Open in IMG/M
3300031768\|Ga0318509_10233345	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300031768\|Ga0318509_10285722	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300031768\|Ga0318509_10671605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. PM	576	Open in IMG/M
3300031769\|Ga0318526_10057094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1501	Open in IMG/M
3300031770\|Ga0318521_10195950	Not Available	1165	Open in IMG/M
3300031771\|Ga0318546_10185585	Not Available	1415	Open in IMG/M
3300031782\|Ga0318552_10170661	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300031792\|Ga0318529_10070427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1541	Open in IMG/M
3300031793\|Ga0318548_10452866	Not Available	628	Open in IMG/M
3300031794\|Ga0318503_10035442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium angustum	1480	Open in IMG/M
3300031794\|Ga0318503_10295414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. PM	526	Open in IMG/M
3300031795\|Ga0318557_10080353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1420	Open in IMG/M
3300031798\|Ga0318523_10238814	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300031798\|Ga0318523_10473250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. PM	621	Open in IMG/M
3300031805\|Ga0318497_10087658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium angustum	1657	Open in IMG/M
3300031805\|Ga0318497_10225066	Not Available	1038	Open in IMG/M
3300031819\|Ga0318568_10329152	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300031819\|Ga0318568_10354236	Not Available	913	Open in IMG/M
3300031821\|Ga0318567_10454140	Not Available	727	Open in IMG/M
3300031833\|Ga0310917_11180708	Not Available	509	Open in IMG/M
3300031845\|Ga0318511_10209227	Not Available	868	Open in IMG/M
3300031846\|Ga0318512_10336846	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300031879\|Ga0306919_10762921	Not Available	744	Open in IMG/M
3300031893\|Ga0318536_10658594	Not Available	522	Open in IMG/M
3300031896\|Ga0318551_10080195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	1707	Open in IMG/M
3300031896\|Ga0318551_10803690	Not Available	547	Open in IMG/M
3300031910\|Ga0306923_10021800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6791	Open in IMG/M
3300031910\|Ga0306923_10150653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2654	Open in IMG/M
3300031910\|Ga0306923_10174903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2451	Open in IMG/M
3300031910\|Ga0306923_10693332	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300031910\|Ga0306923_12115221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	567	Open in IMG/M
3300031941\|Ga0310912_10169483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1657	Open in IMG/M
3300031942\|Ga0310916_10951401	Not Available	718	Open in IMG/M
3300031942\|Ga0310916_11117273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300031946\|Ga0310910_10182440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1621	Open in IMG/M
3300031946\|Ga0310910_10972659	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300031946\|Ga0310910_11473838	Not Available	522	Open in IMG/M
3300031946\|Ga0310910_11590400	Not Available	500	Open in IMG/M
3300031947\|Ga0310909_10256931	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300031947\|Ga0310909_10312268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1318	Open in IMG/M
3300031947\|Ga0310909_11059198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. PM	660	Open in IMG/M
3300031954\|Ga0306926_10903444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1057	Open in IMG/M
3300031954\|Ga0306926_13014877	Not Available	502	Open in IMG/M
3300031981\|Ga0318531_10465325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. PM	573	Open in IMG/M
3300032010\|Ga0318569_10598886	Not Available	513	Open in IMG/M
3300032043\|Ga0318556_10088386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1556	Open in IMG/M
3300032043\|Ga0318556_10462091	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300032054\|Ga0318570_10584448	Not Available	510	Open in IMG/M
3300032059\|Ga0318533_10196365	All Organisms → cellular organisms → Bacteria → Proteobacteria	1444	Open in IMG/M
3300032059\|Ga0318533_10587727	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300032059\|Ga0318533_11127603	Not Available	574	Open in IMG/M
3300032060\|Ga0318505_10056993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1689	Open in IMG/M
3300032064\|Ga0318510_10053739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium angustum	1432	Open in IMG/M
3300032064\|Ga0318510_10337219	Not Available	634	Open in IMG/M
3300032066\|Ga0318514_10383077	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300032076\|Ga0306924_10256846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2007	Open in IMG/M
3300032076\|Ga0306924_10305807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1824	Open in IMG/M
3300032076\|Ga0306924_12291573	Not Available	548	Open in IMG/M
3300032089\|Ga0318525_10352677	Not Available	755	Open in IMG/M
3300032090\|Ga0318518_10157494	Not Available	1155	Open in IMG/M
3300032091\|Ga0318577_10586167	Not Available	530	Open in IMG/M
3300032094\|Ga0318540_10652393	Not Available	507	Open in IMG/M
3300032174\|Ga0307470_11469973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300032261\|Ga0306920_104364836	Not Available	507	Open in IMG/M
3300033289\|Ga0310914_10007290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7992	Open in IMG/M
3300033289\|Ga0310914_10531980	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300033289\|Ga0310914_11810134	Not Available	515	Open in IMG/M
3300033290\|Ga0318519_10881820	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300033290\|Ga0318519_10946877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. PM	533	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.27%
Aquatic	Environmental → Aquatic	4.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.27%
Freshwater	Environmental → Aquatic → Freshwater	4.05%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.05%
Loam	Environmental → Terrestrial → Soil → Loam	3.38%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	74.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.03%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.35%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	55.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.08%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.35%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100363233	3300003218	Bog Forest Soil	MLAALCRALYALSTPPLRRIVALSLALAVLTFALLWLAVAGVL
Ga0062384_1004310832	3300004082	Bog Forest Soil	MVALQAPAMLTALCRALYALSTPPLRRIVALGLALAILTFALLWLAVAGVLYNTAFF
Ga0062389_1011619462	3300004092	Bog Forest Soil	MVALQAPAMLTALCRALYALSTPPLRRIVALGLALAILTFALLWLAVAGVLYNTAFFESRPLNWLVDLMGGVAVLGLSWLFF
Ga0062386_1007475962	3300004152	Bog Forest Soil	MLTALCRALHALSTPPLRRIVALGLALAVLTFALLWLAVAGVLYNSA
Ga0066388_1026939291	3300005332	Tropical Forest Soil	MLNALYRAVHALSMPPLRRIVAQSLGLAILTFAFLWLAAAGVLYNTVF
Ga0070697_1003630562	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLTALLRAVSALSVPQMRRVVALSLGLTVVTFSVLWLAVAAILYNTAFFDWRPLNWLVNLLGGLGVLF
Ga0070717_114569661	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLTALCRAIYALGLPPMRRVVALSLGLAALTFAALWVTVASLLYNTAFFDWRPVNWLVNLLGGL
Ga0073928_111044892	3300006893	Iron-Sulfur Acid Spring	MVIAFFRAVGALSEPPMRRVLALSLALAVLTFAVLWLAVAAILYYTAFFDWRLLNWLVGLLGGLAV
Ga0066710_1025449261	3300009012	Grasslands Soil	MLTAFLRAVYVLSMPPMRRLVMLSLGLAALTFVSLWLAVAGVLY
Ga0099827_115445702	3300009090	Vadose Zone Soil	MLTAFCRALYVLSTPPMRRVVVLSLGFALLTFTLLWLGIAGVLYDTALFEWRPLN
Ga0066709_1018960001	3300009137	Grasslands Soil	MLTALCRATYALTLPPLRRVVALSLGFAVLTFAGLWVAVAGLLYNAAFFEWRALNW
Ga0066709_1042786181	3300009137	Grasslands Soil	MLTAFLRAVYVLSMPPMRRLVMLSLGLAALTFVSLWLAVAGVLYHTALFEWRPLNWLLDLMGGLAVL
Ga0126374_111647602	3300009792	Tropical Forest Soil	MIAALFRAIYALSLPPMRRVVALSLGIAALTFAVLWLVVAGALYNTALFEWGPLNWLVDLTGG
Ga0099796_103454471	3300010159	Vadose Zone Soil	MLTALLRAVSALSVPQMRRVVALSLGLTVVTFAVLWLAVAATLYNTAFFDWRPLNWLVNLLGGLGVLVLS
Ga0126370_115345892	3300010358	Tropical Forest Soil	MLIALYRAVYALSTPPLRQIVALNLALAVLTFALLWLAVAGVLYNTAFFEWRPL
Ga0126379_106358702	3300010366	Tropical Forest Soil	MIAALCRAIYALSLPPMRRVVALSLGIAALTFAVLWLVVAGALYNTALFEWGPLNWL
Ga0126379_135525341	3300010366	Tropical Forest Soil	MLTALCRAFRALVSPLLRRIVALSLVLAALTFVVLWL
Ga0126381_1010775681	3300010376	Tropical Forest Soil	MLVAFCRAVVELSTPPMRRIVALSLGLAALTFAVLWLAVAGVLYNTA
Ga0126381_1011643792	3300010376	Tropical Forest Soil	MRLALQAPEMLTALCRALYTLSMPPLRRVVLLSLVLAVLTFALLWLAVA
Ga0126383_121563841	3300010398	Tropical Forest Soil	VILALSHAVTALGEPPMRRVVVQSFAIAVLAFAALWLGVAFLLYDTVFFDWRPLNWLVELLGG
Ga0137380_106216532	3300012206	Vadose Zone Soil	VITAFLRAVSALSAPQMRRVVALSLGLAVLTFAVLWLAVAATLYNTALFDWRPLNWLVNLLGGLGVLVLS
Ga0137361_102301851	3300012362	Vadose Zone Soil	MFTALCRATYALTLPPMRRVVALSLALAVLTFAALWVAVAGVLYNAAFFEWRVLNWLVDLTGGLAVL
Ga0137390_117884441	3300012363	Vadose Zone Soil	MLTAFCRALYVLSTPPMRRVVVLSLGFALLTFALLWLGIAGVLYDTALFEWRPLNWLLDLMGGLVVLGLSW
Ga0137394_115176271	3300012922	Vadose Zone Soil	MIAALCRAIYALTLPPMRRVVALSLGFAALTFAALWVAVASVLYNATFFE
Ga0137419_110409631	3300012925	Vadose Zone Soil	MLTALLRAVSALCVPQMRRVVALSLGLTVVTFAVLWLAVAATLYNTAFFDWRPLNWLVNLLGGLGVL
Ga0137407_108474231	3300012930	Vadose Zone Soil	MFTALCRAIYALTMPPMRRVVALSLGLAVLTFSALWVAVAGVLYNTAFFEWRLLN
Ga0126369_103666433	3300012971	Tropical Forest Soil	MLIALYRAVYALSTPPLRQIVALNLALAVLTFALLWLAVAGVLYN
Ga0182036_105234021	3300016270	Soil	MLTALCRAFYALSMPPLRRVVALSLALAVLTFSLLWLAVAGVLYNTVLFEWRP
Ga0182036_115354331	3300016270	Soil	MLTALCRAFYALSMPPLRRIVALSLALAMLTFSLLWLAVAGVLYNTVLFEWRPLNWFADLMGGLAVLA
Ga0182036_119397802	3300016270	Soil	MLAALCRAFSALSMPPLRRVVALSLAQAVLTFAVLWLAVAAVLYKAVLFEWRP
Ga0182033_112472792	3300016319	Soil	MMLTAFCRAFYALSQPTLRRVVALSVALAVLTFALLWVAVGSVLYNTAFFEWR
Ga0182035_116701641	3300016341	Soil	VPAAALKAQAMLTALCRALYALSTPPLRRIVALSLALAVLTFALLWLAVAGV
Ga0182032_100865534	3300016357	Soil	MLTALCRAFYALSMPPLRRTIALSLTFGVLTFALLWLAVAGVLYNT
Ga0182032_102138042	3300016357	Soil	MFAALCRAFYALSTPPLRLTVAVSLTLAVLTFALLWLAGAGLLYNT
Ga0182034_120548981	3300016371	Soil	MLTALCRAVYALSTPPLRRIVALCLTLAILTFALLWLAVVGVLYNTAFFEW
Ga0182040_106801893	3300016387	Soil	MPAAALQAPAMLTALYRALYALSTPPLRRIVALSLALAMLTFALLWLAFA
Ga0182039_103445631	3300016422	Soil	MFAALCRAFYALSTPPLRRTVAVSLTLAVLTFALLWLAGAGLLYNTRFF
Ga0182039_112756832	3300016422	Soil	MFAALCRAFYALSTPPLRLTVAVSLTLAVLTFALLWLAVAGLLYNTRFF
Ga0182039_115934702	3300016422	Soil	MLTALCRALYALSTPPLRRIVALGLAVAILTFALLWLAVAGVLYNIAFFDWRPL
Ga0187806_13878351	3300017928	Freshwater Sediment	MLTALCRALYALATPPLRRVVALSLGLSVLTLALLWLAVAGVLYNMAFFEWRPLNWLVDLMGGLA
Ga0187819_101525391	3300017943	Freshwater Sediment	MLTALCRALYALATPPLRRVVALSLGLSVLTLALLWLAVAGVLYNTAFFEWRPLNWLVD
Ga0187770_117373941	3300018090	Tropical Peatland	MLTALCRALYALATPPLRRVVALSLGLSVLTLALLWLAVA
Ga0066662_129978551	3300018468	Grasslands Soil	MFTALCRATYALTLPPMRRVVALSLALAVLTFAALWVAVAGVLYNAAFFEWRVLNW
Ga0210403_106898382	3300020580	Soil	MLTALCRASYALSTPPLRRIVALSLALAVLTFALLWLAFAGILYNTAFFEWRLLNWLVDLMGGLAVLTLSWLFFP
Ga0210403_115244322	3300020580	Soil	MLTALCRAFYALSKPPLRRIVALSLALAVLTFALLWLAVGSVLYNAAFFEWRPLNWLVDLMGGLAVV
Ga0210399_101195275	3300020581	Soil	MMLTALCRAFYALSEPTLRRVVALSLALAVLTFALLWV
Ga0210399_103398773	3300020581	Soil	MLIALYRAVYALSTPPLRRIVALSLVLALLTFVLLWLAVASVLYNMALFEWRPLNWLTDVMGGL
Ga0210399_108768202	3300020581	Soil	MLIALYRAVYALSAPPLRRIVALSLALAALTFALLWL
Ga0210399_115557621	3300020581	Soil	MLTALCRALYALSTPPLRRIVALSLALAVLTFALLWLAFAGILYNTAFFEWRLLNWLVDLMGGLA
Ga0210404_100207293	3300021088	Soil	MLTALYRAAYALSLPPMRRVVALSLALAVLTFAALWVAVAGVLYNAAFFEWRVLNWL
Ga0210394_111618001	3300021420	Soil	MLTALYRAAYALSLPPMRRVVALSLGLAVLTFAALWVAVAGLFYNAAFFEWRVLNWLVDLTGGL
Ga0210402_107937362	3300021478	Soil	MLIALYRAVYALSTPPLRRIVALSLVLALLTFVLLWLAVASVLYNMALFEW
Ga0126371_106257253	3300021560	Tropical Forest Soil	MLTALCRALYTLSMPPLRRVVLLSLVLAVLTFALLWL
Ga0126371_131206971	3300021560	Tropical Forest Soil	MLVALCRAVVEILTPPMRRIVACSLGLAALTFAVLWLTVAGLLYNTAFFAWRPLNWLV
Ga0126371_133703792	3300021560	Tropical Forest Soil	MFTALLRAITALGEPPMRRVVGLSLGLAVLAFAVLWLAVTAVLYQTTFFDWRPLNWLVDLLGGLA
Ga0257156_11360581	3300026498	Soil	MLTALLRAVSALSVPQMRRVVALSLGLTVVTFAVLWLAVAATLYNTAFFDWRPLNWLVNL
Ga0179587_106077511	3300026557	Vadose Zone Soil	MLTALCRATYALTLPPMRRVVALSLGLAVLTFAALWVAVAGLLYNAAFFEWRVLNWLVDLMGGLAVLVLS
Ga0207949_10221941	3300026999	Forest Soil	MVTAFFRAVGALSEPPMRRVVALSLALAILTFAVLWLAIAAILYHTAFFDWRLLNWLVNLLGGLAVVGLTWL
Ga0209526_101995311	3300028047	Forest Soil	MLTALYRATYALTLPPMRRVVALSLGLAVLTFSALWVAVAGVLYNAAFFEWRVLNWL
Ga0222749_107418391	3300029636	Soil	MLIALYRAVYALSTPPLRRIVALSLVLALLTFVLLWLAVASVLYNMA
Ga0308204_100979571	3300031092	Soil	MVAALYRALCALSAPPLRRIVALSVGFATLTFALLWLAVAGV
Ga0318516_104361091	3300031543	Soil	MLTALCRAFYALSMPPLRRVVALSLALAVLTFAVLWLAVAAVLY
Ga0318541_100306684	3300031545	Soil	MLTALCRAFYALSTPPLRRTVALSLTLAVLTFALLWLAVAGLLYNTTLFDWRPLNWLVDLMGGLAVLG
Ga0318541_101750671	3300031545	Soil	MLTALCRALYALSTPPLRRIVALSLALAVLTFALIWLALAGILYNMAFFEWRLLN
Ga0318528_104912571	3300031561	Soil	VPAAALKAQAMLTALCRALYALSTPPLRRIVALSLALAVLTFALLWLAVAGVVYNTAF
Ga0318573_103239762	3300031564	Soil	VPWAALQGPAMVTALYRALYALSTPPLRRIVALSLALAVLTFALLWLAFAGILYN
Ga0318573_107542071	3300031564	Soil	VPAAALKAQAMLTALCRALYALSTPPLRRIVALSLALAVLTFALLWLAVAGVLYNTAFFEWRPFNWLVDLMGGLAV
Ga0318515_107215762	3300031572	Soil	MLTALCRAVYALSTPPLRRIVALCLTLAILTFALLWLAVVGVLYNTAFFEWRPLNW
Ga0318555_104064711	3300031640	Soil	MLTALCRALYALSTPPLRRIVALGLAVAILTFALLW
Ga0306917_101302623	3300031719	Soil	MLTALCRALYALSTPPLRRIVALSLALAVLTFALIWLALAGILYNMAFFELRLLNWLVDLMGGLAVLTLSW
Ga0306917_115184522	3300031719	Soil	MLTALCRALYALSTPPLRRIVALSLALAVLTFALLWLAFAGILYN
Ga0318493_101043951	3300031723	Soil	MLTALCRALYGLSTPPLRRIVALSLALAVLTFALLWLAFASFLYNTAFFEWR
Ga0318500_101863002	3300031724	Soil	MLTALCRAFYALSMPPLRRVVALSLALAVLTFSLLWLAVAGVLYNTV
Ga0318501_102072163	3300031736	Soil	MMLTAFCRAFYALSQPTLRRVVALSLALAVLTFALLWVAVGSVLYN
Ga0306918_108702601	3300031744	Soil	MLTALCRAFYALSMPPLRRTIALSLTFGVLTFALLWLAVAGVLYNTTLFDWRPLNWLVDLMGGLAVLGLSWLF
Ga0318502_101758322	3300031747	Soil	MRLGIQAPAMFAALCRAFYALSTPPLRLTVAVSLTLAVLTFALLWLAVAGLLYNTR
Ga0318502_105549693	3300031747	Soil	MLTALCRAFYALSMPPLRRTIALSLTFGVLTFALLW
Ga0318494_103175102	3300031751	Soil	MLTALCRAFYALSAPPLRRIVALSLMLAILTFALLWLAVAGALYNTAFFEWRPLNRVVELMGGLAVL
Ga0318537_100613691	3300031763	Soil	MFAALCRAFYALSTPPLRRTVAVSLTLAVLTFALLWLAGAGLLYNTRFFDWRPLNWLIDLMGG
Ga0318509_102333452	3300031768	Soil	MRLGIQAPAMFAALCRAFYALSTPPLRLTVAVSLTLAVLTFALLWLAVAGLLYNTRFFDWRPLNWLVDLMG
Ga0318509_102857222	3300031768	Soil	MLTALCRAFYALSMPPLRRIVALSLALAMLTFSLLWLAVAGVLYNTVLFEWRPLNWFADLMGGLAVLALSWLF
Ga0318509_106716051	3300031768	Soil	MLTALCRAFYALSMPPLRRTIALSLTFGVLTFALLWLAVAGVLYNTT
Ga0318526_100570941	3300031769	Soil	MLTALCRALYALSTPPLRRIVALGLAVAILTFALLWLAVAGVLYN
Ga0318521_101959502	3300031770	Soil	MLTALCRAFYALSMPPLRRTIALSLTFGVLTFALLWLAVAGVLYNTTLFDWRPLNWLVD
Ga0318546_101855852	3300031771	Soil	MFAALCRAFYALSTPPLRRTVAVSLTLAVLTFALLWLAGAGLLYNTRFFDWRPLNWLIDLIGG
Ga0318552_101706611	3300031782	Soil	MLTALYRAFYALSTPPLRRIVALSLTLAILTFGLLWLAVAGVLYNTAFFEWRPF
Ga0318529_100704273	3300031792	Soil	MLTALCRALYALSTPPLRRIVALGLAVAILTFALLWLAVAGVLYNIAFFDWRPLNWLADLMGGLAVLALSW
Ga0318548_104528662	3300031793	Soil	MLAALCRAFYALSMPPLRRVVALSLALAVLTFAVLWLAVAAVLYNTV
Ga0318503_100354423	3300031794	Soil	MLTALCRAFYALSAPPLRRIVALSLMLAILTFALLWLAVAGALYNTAFFEWRPLNWIV
Ga0318503_102954141	3300031794	Soil	MLTALCRALYALSTPPLRRIVALSLALAVLTFALIWLALAGILYNMAFFEW
Ga0318557_100803533	3300031795	Soil	MLTALCRALYALSTPPLRRIVALGLAVAILTFALLWLAVAGVLYNIAFFDWRPLNWLAD
Ga0318523_102388141	3300031798	Soil	MLTALCRAFYALSMPPLRRTIALSLTFGVLTFALLWLAVAGVLYNTTLFD
Ga0318523_104732502	3300031798	Soil	MLTALCRALYALSTPPLRKIVALSLALAVLTFALLWLAFASILYNTAFFE
Ga0318497_100876581	3300031805	Soil	MLTALCRALYGLSTPPLRRIVALGLALAILTFALLWLAVAGVLYN
Ga0318497_102250661	3300031805	Soil	MLTALCRALYALSTPPLRRIVALSLALAVLTFALIWLALAGILYNMAFFEWRL
Ga0318568_103291521	3300031819	Soil	MRLGIQAPAMFAALCRAFYALSTPPLRLTVAVSLTLAVLTFALLWLAVAGLLYNTRFFDWRPLNWLVDLMGGLA
Ga0318568_103542361	3300031819	Soil	MLTALCRALYGLSTPPLRRIVALGLALAILTFALLWLAVAGVLYNIAFFDWRPLNWLADLMGGLAVLA
Ga0318567_104541401	3300031821	Soil	MLTALCRAFYALSMPPLRRTIALSLTFGVLTFALLWLAV
Ga0310917_111807081	3300031833	Soil	VPAAALQAPAMLTALCRAFYALSTPPLRRIVALSLALAVLTFALLSLAVAGVLYNAAFFEWRPL
Ga0318511_102092272	3300031845	Soil	MLTALCRAFYALSAPPLRRIVALSLMLAILTFALLWLAVAGALYNTAFFEWRPLNWIVELMGGLAVL
Ga0318512_103368462	3300031846	Soil	MLTALCRAFYALSMPPLRRIVALSLALAMLTFSLLWLAVAGVLYNTVLFEWRPLNWFADLMGGLAVLALSWLFC
Ga0306919_107629211	3300031879	Soil	MFAALCRAFYALSTPPLRRTVAVSLTLAVLTFALLWLAVAGVLYNTRFFDWRPLNWLVDLMGGLAIL
Ga0318536_106585941	3300031893	Soil	MLAALCRAFSALSMPPLRRVVALSLAQAVLTFAVLWLAVAAVLYKAVLF
Ga0318551_100801953	3300031896	Soil	MLTALCRALYALSTPPLRRIVALSLALAVLTFALIWLALAGILYNMAFFEWPLLNWL
Ga0318551_108036901	3300031896	Soil	MLTALYRAFHALSTTPLRRIVALSLALAVLTFALLWLAVAGVLYNTAFFEWRPLNWLVDLMGGLAVLGLSWLL
Ga0306923_100218007	3300031910	Soil	MLTALCRALYALSTPPLRRIVALSLALAVLTFALIWLALAGILYNMAFFEWP
Ga0306923_101506534	3300031910	Soil	MLTALCRAFYALSMPPLRRTIALSLTFGVLTFALLWLAVAGVLYNTTFFDWRPLNWLVDLMGGLAVLG
Ga0306923_101749031	3300031910	Soil	MFAALCRAFYALSTPPLRRTVAVSLTLAVLTFALLWLAVAGLLYNTRFFDWRPLNWLVDL
Ga0306923_106933321	3300031910	Soil	MLTALYRAFYALSTPPLRRIVALSLTLAILTFGLLWLAVAGVLYKIAFFDWRPLNW
Ga0306923_121152211	3300031910	Soil	VPAAALKAQAMLTALCRALYALSTPPLRRIVALSLALAVLTFALLWLAVAGVLYNTAFFEWRPL
Ga0310912_101694831	3300031941	Soil	MLTALCRALYALSTPPLRRIVALSLALAVLTFALIWLALAGILYNMAFFEWRLLNWLVDLMGGLAVLTLSWLFFPVVV
Ga0310916_109514011	3300031942	Soil	VPWAALQGPAMVTALYRALYALSTPPLRRIVALSLALAVLTFALLWLAFAGILYNTAFFEWRLLNWLVDLMGGLAV
Ga0310916_111172731	3300031942	Soil	MLTALCRAVYALSTPPLRRIVALCLTLAILTFALLWLAVVGVLYNTAFFEWRPLNWLVDLMGGLAVVGLSWLF
Ga0310910_101824403	3300031946	Soil	MLTALCRALYALSTPPLRRIVALSLALAVLTFALIWLALAGILYNMAFFE
Ga0310910_109726592	3300031946	Soil	MLIALYRAVYALSTPPLRQIVALNLALAVLTFALLWLAVAGVLYNTAFFEWRPLNWLADAMGWL
Ga0310910_114738381	3300031946	Soil	MLTALYRAFYALSTPPLRRIVALSLTLAILTFGLLWLAVAGVLYNTAFFEWRPFNW
Ga0310910_115904001	3300031946	Soil	MLEALCRALYTLSTRPLRRIVVLSLALAVMTFALLWLAVAGVLYNTAFFEWRPLNWL
Ga0310909_102569311	3300031947	Soil	MLTALYRAFHALSTTPLRRIVALSLALAVLTFALLWLAVAGVLYNT
Ga0310909_103122681	3300031947	Soil	MLTALCRAFYALSMPPLRRVVALSLALAVLTFSLLWLAVAGVLYNTVLFEWRPLNWFADQMG
Ga0310909_110591981	3300031947	Soil	MLTALCRAVYALSTPPLRRIVALCLTLAILTFALLWLAVVGVLYNTAFFEWRPLNWLVDLMGGLAVV
Ga0306926_109034441	3300031954	Soil	VPAAALQAPAMLTALCRALYALSTPPLRRIVALCLTLAILTFALLWLAVVGVLYN
Ga0306926_130148771	3300031954	Soil	MLTALYRAFHALSTTPLRRIVALSLALAVLTFALLWLAVAGVLYNTA
Ga0318531_104653251	3300031981	Soil	MLTALCRALYALSTPPLRRIVALGLAVAILTFALLWLAVAGVL
Ga0318569_105988861	3300032010	Soil	MFAALCRAFYALSTPPLRLTVAVSLTLAVLTFALLWLAVAGLLYNTRFFDWRPLNWLVDLMGGLAI
Ga0318556_100883861	3300032043	Soil	MLTALCRALYALSTPPLRRIVALSLALAVLTFALIWLALAGILYN
Ga0318556_104620911	3300032043	Soil	MLTALCRAFYALSMPPLRRIVALSLALAMLTFSLLWLAVAGVLY
Ga0318570_105844481	3300032054	Soil	MFAALCRAFYALSTPPLRRTVAVSLTLAVLTFALLWLAVAGVLYNTRFFDWRP
Ga0318533_101963653	3300032059	Soil	MLTALCRAFYALSMPPLRRTIALSLTFGVLTFALLWLA
Ga0318533_105877273	3300032059	Soil	MLAALCRAFSALSMPPLRRVVALSLALAVLTFAVLWLAVAAVLNKAVLFEWRPLNWFADLMGGLAVLA
Ga0318533_111276031	3300032059	Soil	MLTALYRAFHALSTPPLRRIVALSLALAVLTFALLWLAVAGVLYNTAFFEWRPLNWL
Ga0318505_100569931	3300032060	Soil	MLTALCRAFYALSAPPLRRIVALSLMLAILTFALLWLAVAGALYNTAFFE
Ga0318510_100537391	3300032064	Soil	MLTALCRAFYALSAPPLRRIVALSLMLAILTFALLWLAVAGALYNTAFFEWRPLNW
Ga0318510_103372191	3300032064	Soil	MLTALYRAFPALSTTPLRRIVALSLALAVLTFALLWLAVAGVLYNTAFFEW
Ga0318514_103830771	3300032066	Soil	MIIALFRAVAVLAAPAMRRVVAQSLGLAILAFAALWVAVAAGLYQTAMFDWRPLNWLVNLLGGLGVLLL
Ga0306924_102568463	3300032076	Soil	MLIALYRAVYALSTPPLRQIVALNLALAVLTFALLWLAVAGVLYNTAFFEWRPLNWLADAMGGLAVLALSWL
Ga0306924_103058071	3300032076	Soil	MLTALCRALYALSTPPLRRIVALSLALAVLTFALIWLALA
Ga0306924_122915731	3300032076	Soil	MVTAFLRAVSALSAPPMRRIVGLSLGFAVLTFAVLWLGVAVVLYNTAFFDWRPLNWLVNLLGGLGVLF
Ga0318525_103526771	3300032089	Soil	MLTALCRAFYALSMPPLRRTIALSLTFGVLTFALLWLAVAGVLYNTTLFDWRPLNWLVDLMGGLAVLG
Ga0318518_101574941	3300032090	Soil	MRLGIQAPAMFAALCRAFYALSTPPLRLTVAVSLTLAVLTFALLWLAGAGLLYNTRFFDWRPLNWLIDL
Ga0318577_105861671	3300032091	Soil	MVTAFLRAVSALSAPPMRRIVGLSLGFAVLTFAVLWLGVAVVLYNTAFFDWRPLNWLVNLLGGLGVLFLSWLL
Ga0318540_106523931	3300032094	Soil	MLAALCRAFYALSMPPLRRVVALSLALAVLTFAVLWLAVAAVLYNT
Ga0307470_114699732	3300032174	Hardwood Forest Soil	MLTAFLRAVYMLRAPPMRRVVALSLGFAVLTFAGLWVAVAGLLYNAAFFEWRVLNWLVELMGGLAVLV
Ga0306920_1043648362	3300032261	Soil	VPAAALKAQAMLTALCRALYALSTPPLRRIVALSLALAVLTFALLWLAVAGVLYNTAFFEWRPLNWLV
Ga0310914_100072909	3300033289	Soil	MLTALCRAFYALSAPPLRRIVALSLMLAILTFALLWLAVAGALYNTAFFEWRPLN
Ga0310914_105319802	3300033289	Soil	VPWAALQGPAMVTALYRALYALSTPPLRRIVALSLALAVLTFALLWLAFAGILYNTAFFEWRLLNWLVDLMGGLAVLALS
Ga0310914_118101342	3300033289	Soil	MLTALYRAFHALSTTPLRRIVALSLALAVLTFALLWLAVAGVLYNTAFFEWRPLN
Ga0318519_108818201	3300033290	Soil	MLTALCRAFYALSMPPLRRTIALSLTFGVLTFALLWLAVAGVLYNTTFFDWRPLNW
Ga0318519_109468772	3300033290	Soil	MLTALCRAFYALSMPPLRRTIALSLTFGVLTFALLWLAVAGVLYNTTLF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048133

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences