Metagenome Family F047748

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047748
Family Type	Metagenome
Number of Sequences	149
Average Sequence Length	48 residues
Representative Sequence	GFALEQAGALAAPAGWVTNSATVTDDGTNKSVTLPATNSSQFFRLRRP
Number of Associated Samples	107
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.03 %
% of genes near scaffold ends (potentially truncated)	89.26 %
% of genes from short scaffolds (< 2000 bps)	92.62 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.893 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (39.597 % of family members)
Environment Ontology (ENVO)	Unclassified (57.047 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.732 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 18.42% Coil/Unstructured: 81.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF13927	Ig_3	4.70
PF00578	AhpC-TSA	3.36
PF01850	PIN	3.36
PF04397	LytTR	2.01
PF13306	LRR_5	1.34
PF04055	Radical_SAM	1.34
PF04542	Sigma70_r2	1.34
PF13517	FG-GAP_3	1.34
PF04909	Amidohydro_2	1.34
PF00069	Pkinase	1.34
PF07679	I-set	1.34
PF00072	Response_reg	0.67
PF00497	SBP_bac_3	0.67
PF16320	Ribosomal_L12_N	0.67
PF01520	Amidase_3	0.67
PF00034	Cytochrom_C	0.67
PF00400	WD40	0.67
PF02602	HEM4	0.67
PF01546	Peptidase_M20	0.67
PF03781	FGE-sulfatase	0.67
PF13302	Acetyltransf_3	0.67
PF00463	ICL	0.67
PF00378	ECH_1	0.67
PF12706	Lactamase_B_2	0.67
PF03169	OPT	0.67
PF03160	Calx-beta	0.67
PF13633	Obsolete Pfam Family	0.67
PF02452	PemK_toxin	0.67
PF13711	DUF4160	0.67
PF02687	FtsX	0.67
PF01934	HepT-like	0.67
PF12768	Rax2	0.67
PF13442	Cytochrome_CBB3	0.67
PF04185	Phosphoesterase	0.67
PF13516	LRR_6	0.67
PF07885	Ion_trans_2	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.37
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.34
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.34
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.34
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.34
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	0.67
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.67
COG1297	Predicted oligopeptide transporter, OPT family	General function prediction only [R]	0.67
COG1587	Uroporphyrinogen-III synthase	Coenzyme transport and metabolism [H]	0.67
COG2224	Isocitrate lyase	Energy production and conversion [C]	0.67
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.67
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.67
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	0.67
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.89 %
Unclassified	root	N/A	16.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.89 %
Unclassified	root	N/A	16.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.89 %
Unclassified	root	N/A	16.11 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	66.44 %
Unclassified	root	N/A	16.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.34 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.67 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	65.77 %
Unclassified	root	N/A	16.11 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	46.31 %
Unclassified	root	N/A	16.11 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	6.71 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.67 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.67 %
Candidatus Poribacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria	0.67 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	46.31 %
Unclassified	root	N/A	16.11 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	6.71 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.01 %
unclassified Candidatus Poribacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.67 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.67 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	46.31 %
Unclassified	root	N/A	16.11 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	4.03 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	2.01 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.34 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.67 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.67 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	46.31 %
Unclassified	root	N/A	16.11 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	3.36 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.01 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.67 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.67 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.67 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	46.31 %
Unclassified	root	N/A	16.11 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	3.36 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.01 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.67 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.67 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.67 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_102052103	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	520	Open in IMG/M
3300001213\|JGIcombinedJ13530_107725246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300004156\|Ga0062589_101127550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	744	Open in IMG/M
3300004643\|Ga0062591_101853330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300005330\|Ga0070690_101575815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300005354\|Ga0070675_102205877	Not Available	507	Open in IMG/M
3300005445\|Ga0070708_101745463	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300005526\|Ga0073909_10522938	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300005549\|Ga0070704_100461718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1095	Open in IMG/M
3300005554\|Ga0066661_10213674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1195	Open in IMG/M
3300005617\|Ga0068859_101287061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	806	Open in IMG/M
3300005618\|Ga0068864_102370771	Not Available	537	Open in IMG/M
3300005841\|Ga0068863_100604742	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300005843\|Ga0068860_102775643	Not Available	508	Open in IMG/M
3300005844\|Ga0068862_101639844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300006224\|Ga0079037_102012363	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	577	Open in IMG/M
3300006755\|Ga0079222_10565903	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	856	Open in IMG/M
3300006796\|Ga0066665_10032867	All Organisms → cellular organisms → Bacteria	3426	Open in IMG/M
3300006844\|Ga0075428_102638979	Not Available	513	Open in IMG/M
3300006969\|Ga0075419_11390995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300009012\|Ga0066710_100268330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2480	Open in IMG/M
3300009012\|Ga0066710_100506494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1820	Open in IMG/M
3300009012\|Ga0066710_100762104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	1481	Open in IMG/M
3300009012\|Ga0066710_101927379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	882	Open in IMG/M
3300009012\|Ga0066710_102291013	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	786	Open in IMG/M
3300009012\|Ga0066710_102654437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	717	Open in IMG/M
3300009012\|Ga0066710_103195771	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300009012\|Ga0066710_103312679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	615	Open in IMG/M
3300009038\|Ga0099829_10254545	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1432	Open in IMG/M
3300009094\|Ga0111539_11130117	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	910	Open in IMG/M
3300009098\|Ga0105245_12290305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300009100\|Ga0075418_13084784	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300009137\|Ga0066709_102093164	Not Available	782	Open in IMG/M
3300009137\|Ga0066709_103175943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300009137\|Ga0066709_104311128	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300009156\|Ga0111538_11085374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1012	Open in IMG/M
3300009156\|Ga0111538_12807517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300009156\|Ga0111538_12889830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	601	Open in IMG/M
3300009157\|Ga0105092_10606526	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300009162\|Ga0075423_11847928	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300009176\|Ga0105242_10208986	Not Available	1738	Open in IMG/M
3300009176\|Ga0105242_10975841	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	853	Open in IMG/M
3300009177\|Ga0105248_13361594	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300009502\|Ga0114951_10595942	Not Available	531	Open in IMG/M
3300009502\|Ga0114951_10619275	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300010304\|Ga0134088_10694163	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300010323\|Ga0134086_10449611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300010358\|Ga0126370_10315697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1247	Open in IMG/M
3300010366\|Ga0126379_12895544	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300010376\|Ga0126381_101627160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	933	Open in IMG/M
3300010399\|Ga0134127_10621345	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300010399\|Ga0134127_11059201	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300010399\|Ga0134127_12635673	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300010400\|Ga0134122_10906576	Not Available	853	Open in IMG/M
3300010401\|Ga0134121_10603355	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300010401\|Ga0134121_11443699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	700	Open in IMG/M
3300010403\|Ga0134123_12308381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300011270\|Ga0137391_11306190	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300011271\|Ga0137393_10984412	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	718	Open in IMG/M
3300011403\|Ga0137313_1042397	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300011425\|Ga0137441_1181794	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300012096\|Ga0137389_11432273	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300012096\|Ga0137389_11774487	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300012189\|Ga0137388_10645552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	984	Open in IMG/M
3300012199\|Ga0137383_10099026	All Organisms → cellular organisms → Bacteria	2117	Open in IMG/M
3300012201\|Ga0137365_10763832	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	706	Open in IMG/M
3300012202\|Ga0137363_10549086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	973	Open in IMG/M
3300012202\|Ga0137363_10787212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	806	Open in IMG/M
3300012203\|Ga0137399_10237638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1491	Open in IMG/M
3300012204\|Ga0137374_10574208	Not Available	863	Open in IMG/M
3300012205\|Ga0137362_10152611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1976	Open in IMG/M
3300012205\|Ga0137362_10857495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	777	Open in IMG/M
3300012205\|Ga0137362_10995045	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300012205\|Ga0137362_11284014	Not Available	617	Open in IMG/M
3300012206\|Ga0137380_11094745	Not Available	679	Open in IMG/M
3300012207\|Ga0137381_10915571	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	758	Open in IMG/M
3300012207\|Ga0137381_10980625	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	729	Open in IMG/M
3300012207\|Ga0137381_11034989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	707	Open in IMG/M
3300012207\|Ga0137381_11045170	Not Available	704	Open in IMG/M
3300012209\|Ga0137379_10023377	All Organisms → cellular organisms → Bacteria	5939	Open in IMG/M
3300012209\|Ga0137379_11606373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	549	Open in IMG/M
3300012209\|Ga0137379_11738155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300012211\|Ga0137377_10248649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1708	Open in IMG/M
3300012349\|Ga0137387_10166562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1574	Open in IMG/M
3300012349\|Ga0137387_10433764	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300012350\|Ga0137372_10223017	Not Available	1496	Open in IMG/M
3300012350\|Ga0137372_10411169	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300012350\|Ga0137372_10416637	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300012350\|Ga0137372_10852536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300012351\|Ga0137386_11002233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300012353\|Ga0137367_10758151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300012354\|Ga0137366_10503934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	874	Open in IMG/M
3300012355\|Ga0137369_10944554	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300012357\|Ga0137384_10780370	Not Available	773	Open in IMG/M
3300012357\|Ga0137384_11466687	Not Available	531	Open in IMG/M
3300012358\|Ga0137368_10213515	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1362	Open in IMG/M
3300012358\|Ga0137368_10664530	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	658	Open in IMG/M
3300012359\|Ga0137385_11463150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300012361\|Ga0137360_10212714	Not Available	1571	Open in IMG/M
3300012361\|Ga0137360_10801086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	811	Open in IMG/M
3300012362\|Ga0137361_10036230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3964	Open in IMG/M
3300012362\|Ga0137361_10221009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1719	Open in IMG/M
3300012362\|Ga0137361_10573077	Not Available	1035	Open in IMG/M
3300012362\|Ga0137361_10804080	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	855	Open in IMG/M
3300012362\|Ga0137361_10821663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	845	Open in IMG/M
3300012362\|Ga0137361_11729650	Not Available	544	Open in IMG/M
3300012363\|Ga0137390_11163669	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300012685\|Ga0137397_10109452	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2030	Open in IMG/M
3300012917\|Ga0137395_10079665	All Organisms → cellular organisms → Bacteria	2134	Open in IMG/M
3300012917\|Ga0137395_10383911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1004	Open in IMG/M
3300012917\|Ga0137395_10884660	Not Available	646	Open in IMG/M
3300012923\|Ga0137359_10084983	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2781	Open in IMG/M
3300012923\|Ga0137359_10126115	All Organisms → cellular organisms → Bacteria	2273	Open in IMG/M
3300012929\|Ga0137404_11693829	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	587	Open in IMG/M
3300012930\|Ga0137407_11545875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300012944\|Ga0137410_11651170	Not Available	562	Open in IMG/M
3300013306\|Ga0163162_10747753	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1097	Open in IMG/M
3300014306\|Ga0075346_1113400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300014879\|Ga0180062_1124391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300014969\|Ga0157376_11155411	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	801	Open in IMG/M
3300015241\|Ga0137418_11071024	Not Available	576	Open in IMG/M
3300015252\|Ga0180075_1014727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1033	Open in IMG/M
3300015359\|Ga0134085_10539956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300017659\|Ga0134083_10604549	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300018021\|Ga0187882_1153669	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	933	Open in IMG/M
3300018468\|Ga0066662_11448210	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	713	Open in IMG/M
3300018482\|Ga0066669_12457394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	500	Open in IMG/M
3300020195\|Ga0163150_10027167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4970	Open in IMG/M
3300020195\|Ga0163150_10150300	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1336	Open in IMG/M
3300020213\|Ga0163152_10279773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300021080\|Ga0210382_10081570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1325	Open in IMG/M
3300025910\|Ga0207684_11730368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300025934\|Ga0207686_10711684	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	799	Open in IMG/M
3300025938\|Ga0207704_10366313	Not Available	1127	Open in IMG/M
3300025940\|Ga0207691_10299570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1381	Open in IMG/M
3300025941\|Ga0207711_10316751	Not Available	1441	Open in IMG/M
3300026089\|Ga0207648_10396624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1250	Open in IMG/M
3300026310\|Ga0209239_1211216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	688	Open in IMG/M
3300027821\|Ga0209811_10118351	All Organisms → cellular organisms → Bacteria → PVC group	964	Open in IMG/M
3300027835\|Ga0209515_10495014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300027896\|Ga0209777_10769409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	678	Open in IMG/M
3300028381\|Ga0268264_10717583	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300031740\|Ga0307468_102318048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	522	Open in IMG/M
3300031834\|Ga0315290_11727734	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300032157\|Ga0315912_11371457	Not Available	558	Open in IMG/M
3300032256\|Ga0315271_10500086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1031	Open in IMG/M
3300033416\|Ga0316622_100210667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2080	Open in IMG/M
3300033485\|Ga0316626_10597007	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	951	Open in IMG/M
3300034115\|Ga0364945_0297567	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.55%
Host-Associated	Host-Associated	17.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.47%
Plants	Host-Associated → Plants	17.45%
Aquatic	Environmental → Aquatic	12.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.41%
Freshwater	Environmental → Aquatic → Freshwater	8.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.04%
Sediment	Environmental → Aquatic → Sediment	2.68%
Marine	Environmental → Aquatic → Marine	0.67%
Floodplain	Environmental → Terrestrial → Floodplain	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.04%
Lake	Environmental → Aquatic → Freshwater → Lake	4.70%
Loam	Environmental → Terrestrial → Soil → Loam	3.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.01%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.34%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.34%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.34%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.67%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.67%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.04%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.01%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.01%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.34%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.34%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.67%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.67%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.67%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	39.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.37%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.03%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	2.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.01%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.34%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.34%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.34%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.67%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.67%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.67%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.67%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.67%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.67%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014306	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D1	Environmental	Open in IMG/M
3300014879	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015252	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300020213	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP8.IB-2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1020521031	3300000559	Soil	SADTSEFVLEKADALAAPTSWITNSASITDDGNNKSATLPATNSSQFFRLRRP*
JGIcombinedJ13530_1077252461	3300001213	Wetland	GTPTPALNWAPNAASVTDDGTNKSVTIPATNTAQFFRLRRQ*
Ga0062589_1011275502	3300004156	Soil	YYRVIAPTSWIANTAGIAENGTSESVTLPATNSAQFFRLRRP*
Ga0062591_1018533301	3300004643	Soil	GALLPAATWTTNTASIADDGTNKSVTLPATNSSQFFRLRRP*
Ga0070690_1015758152	3300005330	Switchgrass Rhizosphere	EQAGTLAATANWVTNTTRITDDGTNKSVTLLATNSLQFFRLSRP*
Ga0070675_1022058771	3300005354	Miscanthus Rhizosphere	SWPSADAVGFALEQTGTLASPTNWVTNTGSVTNEGTNKSVSLPATNRAQFFRLRRP*
Ga0070708_1017454631	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GGFALVQAGTLATPASWVTNAVSVTDDGTNKSVTLPATNSAQFFRLRRP*
Ga0073909_105229381	3300005526	Surface Soil	ASWVPNTASVTDVRANKSVTIPATNSPQFFRLRHP*
Ga0070704_1004617182	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VDTAGFALEQAGPLAAPAGWVTNSATVTDDGANKSVTLPATNSSQFFRLRRP*
Ga0066661_102136741	3300005554	Soil	LATPAGWVTNSASVTDDGTNRTVTIPATNSVRFFRLHRL*
Ga0068859_1012870611	3300005617	Switchgrass Rhizosphere	VSLLAGVWLTGGFALEQAGPLAAPAGWVTNSATVTDDGANKSVTIPATNSSQFFRLRRP*
Ga0068864_1023707711	3300005618	Switchgrass Rhizosphere	VLSVRRSGSDVEVSWPSADTAGFVLEQANTLTRSAGWIPNTTGVTDDGTHRSVTLRGMNSAQFFRLRKP*
Ga0068863_1006047421	3300005841	Switchgrass Rhizosphere	WPFANTADFTLEQSPTLAPESWAPNTATITDDGAKKSLLIPATNDPQFFRLRRP*
Ga0068860_1027756431	3300005843	Switchgrass Rhizosphere	PAVDAAGFALEQTDSLAAPAGWVTNFAIVTDGSAKKSVTLPATSNSQFFRLRRP*
Ga0068862_1016398443	3300005844	Switchgrass Rhizosphere	TAGFALEQSGPLAAPAGWFTNSATVTNDGTNKSVTLPATNSSQFFHLRRP*
Ga0079037_1020123631	3300006224	Freshwater Wetlands	AAELAAPTTWTTNTASVTDDGTNKSVTLPATNRAQFFRLRRP*
Ga0079222_105659032	3300006755	Agricultural Soil	ATPANWVTNSANITDDGTNKTVAIPAASSPQFFRLRRP*
Ga0066665_100328673	3300006796	Soil	IDTSEFTLEQSTTLAAPVTWVANTTAATDDGTNKSVILPATNSAQFFRLRRP*
Ga0075428_1026389791	3300006844	Populus Rhizosphere	ALEQSTALRAPASWAANTAIVTDDGVKRSVTLSATNSPQFFRLRRP*
Ga0075419_113909952	3300006969	Populus Rhizosphere	GANVTLSWPMVDTADFALEQAGPLAAPAGWIPNSATIADDGAKKSVTIPATNSSQFFRLRRP*
Ga0066710_1002683301	3300009012	Grasslands Soil	ASWVSNTATVTDDGTNKSVSIPATTSTQFFRLRRP
Ga0066710_1005064941	3300009012	Grasslands Soil	LVPPASWVSNTVSISDDGTNKSVTVPATNAAQFFRLRRP
Ga0066710_1007621041	3300009012	Grasslands Soil	PASWASNTASVSDDGTNKSVTVPATNSAQFFRLRRP
Ga0066710_1019273793	3300009012	Grasslands Soil	ADFLLQQTGTPITPASWVSNTASITDDGTTKSVTLPATNSAQFFRLLKP
Ga0066710_1022910133	3300009012	Grasslands Soil	QITTPASWVTNAASVTDNGTNKSVTLPATNSAQFFRLRRP
Ga0066710_1026544373	3300009012	Grasslands Soil	MVSWPSADTAGFALEQAGTLAAPARWVSNTATVTDDGTNKSVTLPATKSAQFFRLRGP
Ga0066710_1031957711	3300009012	Grasslands Soil	SAGTAGFGLQQAGTLTAPASWVSNTDTVSDDGTNKSVTIPATNGAQFFRLRRP
Ga0066710_1033126793	3300009012	Grasslands Soil	DTADFALQQASTVAAPANWVPNTASVDDDGTNKSVTIPTTNSAQFFRLRRP
Ga0099829_102545452	3300009038	Vadose Zone Soil	DTASFTLEQAGTLAPPPSWVTNVASITDDGTNKSVTLPATNSSQFFRLRRP*
Ga0111539_111301172	3300009094	Populus Rhizosphere	GFALEQAGTLAVPTNWITNTASVTDDGANKSVTIPGTNSTQSFRLRRP*
Ga0105245_122903051	3300009098	Miscanthus Rhizosphere	SLDTAGFALEQSGPLAAPAGWFTNSATVTNDGTNKSVTLPATNSSQFFRLRRP*
Ga0075418_130847841	3300009100	Populus Rhizosphere	QAGLLAAPAGWVTNSATVTDDGANKSVTIPATNSPKFFRIRRP*
Ga0066709_1020931641	3300009137	Grasslands Soil	TASFTLEQAGTLAPPPSWVTNVASITDDGTNKSVTLPATNSPQFFRLRRP*
Ga0066709_1031759432	3300009137	Grasslands Soil	IVSWPSVGTASFVLEQARTLAPPPTWVTNAASITDDGTNKSVTLPATNSSQFFRLRRP*
Ga0066709_1043111282	3300009137	Grasslands Soil	LEQTGTLTPPVSWFTNAASITDDGTNKSETVPATSSAQFFRLRRP*
Ga0111538_110853742	3300009156	Populus Rhizosphere	ALEQAGLLAAPAGWVTNSATVTDDGTTKSVTLPATNSSLFFRLRRP*
Ga0111538_128075171	3300009156	Populus Rhizosphere	ALEQSGTLAPPTSWVTNTASVTDDGANKSVTLPATNSPQFFRLRRP*
Ga0111538_128898302	3300009156	Populus Rhizosphere	LGTPISWVANAASINDDGTTKSVNLPPTNSAQFFRLRRP*
Ga0105092_106065262	3300009157	Freshwater Sediment	PAAWITNAAGVTDDGARKWVAMPATNNLQFFRLRRP*
Ga0075423_118479283	3300009162	Populus Rhizosphere	FDSAGFALEQAGTLAVPTNWITNTASVTDDGANKSVTIPGTNSTQSFRLRRP*
Ga0105242_102089862	3300009176	Miscanthus Rhizosphere	APESWAPNTATITDDGAKKSLLVPATNDPQFFRLRRP*
Ga0105242_109758412	3300009176	Miscanthus Rhizosphere	WPAVDTAGFALEQAGLLAAPASWVTNPATVTNDGANKSVTIPATNSSQFFRLRRP*
Ga0105248_133615941	3300009177	Switchgrass Rhizosphere	LEQAGPLAAPAGWVTNSATVTDDGTNKSVTLPATNTSQFFRLRRP*
Ga0114951_105959421	3300009502	Freshwater	SVDTDGFGLEQAATPAAPASWVSNAASLADDGSNKSVTIPATNSMQFFRLRRL*
Ga0114951_106192752	3300009502	Freshwater	MVSWPSADTAGFALERAGTLASPASWVTNSATVTDDGINKSVILPATNGALFFRLRRP*
Ga0134088_106941631	3300010304	Grasslands Soil	TLEQTTRLVPPTTWLSNTAPITDDGTNKSVTLPATNPAQFFRLRRP*
Ga0134086_104496111	3300010323	Grasslands Soil	QAGTLASPASWVTNAASISDDGANKSVTIPATNSAQFFRLRLP*
Ga0126370_103156973	3300010358	Tropical Forest Soil	FWPSDPAGFALEHAVGLSPLARWLPNATSITDDHTNKSVTLPATSSPEFFRLRRP*
Ga0126379_128955441	3300010366	Tropical Forest Soil	PMDPASWISTTASISDDGITKSVSLPATNSAQFFRLRRP*
Ga0126381_1016271602	3300010376	Tropical Forest Soil	FVFEQTADLAPPANWVPNTAYITDDGTNKSVTLPATNSAQFFRLRQP*
Ga0134127_106213452	3300010399	Terrestrial Soil	GFTLEQAGTVASPASWVTNSAGVTDDGTNKSVALPATNSAHFFRLRRP*
Ga0134127_110592011	3300010399	Terrestrial Soil	WPSANTVGFALEQANTLAAPVNWLTNISTITDDGTNKSITLPTTNASQFFRLRKP*
Ga0134127_126356731	3300010399	Terrestrial Soil	PASRVTNTASVTDDGTNQSVTVPATNSPQFFRLRQP*
Ga0134122_109065762	3300010400	Terrestrial Soil	RSGENVTLSWPAVDTAGFALEQASPLAASAGWVPNSATIADDGTKKSVTLPAANGSQFFRLRRP*
Ga0134121_106033552	3300010401	Terrestrial Soil	VLEQAGALAAPTSWVTNSTSITDDGINKSVTLPATNTAQFFRLRRP*
Ga0134121_114436991	3300010401	Terrestrial Soil	FWLTGGFALEQAGPLAAPAGWLAISATVTNDGANKSVTVPATNSSQFFRLRRP*
Ga0134123_123083811	3300010403	Terrestrial Soil	TGFTLEAGTLTAPAGWVTNAASVTDDGINKSVTLPATNSAQFFRLRRP*
Ga0137391_113061902	3300011270	Vadose Zone Soil	LEQAGTLAPPPSWVTNAASITDDGTNKSVTLPATNSPQFFRLRRP*
Ga0137393_109844121	3300011271	Vadose Zone Soil	ALAPSATWVTNTASITDDDTNKSVTLPATNSSQFFRLRKP*
Ga0137313_10423971	3300011403	Soil	WPTVDTAGFALEQAGPLAAPAGWVTNSANGTNDGTNKSVTLPATNSSQFFRLRRP*
Ga0137441_11817941	3300011425	Soil	DPAGWVTTSATVTNDGANKSVTLPATNNSQFFRLRRP*
Ga0137389_114322731	3300012096	Vadose Zone Soil	QAGTLVPPPSWVTNAASITDDGTNKSVALPATNSAQFFRLRRP*
Ga0137389_117744871	3300012096	Vadose Zone Soil	PQGGIMVSWPSADTASFTLEQAGTLAPPPSWVTNTASITDDGTNKSVTLPATNSPQFFRLRRP*
Ga0137388_106455521	3300012189	Vadose Zone Soil	ALAPSATWVTNTSGISDDGTNKSVTLPATNSLQFFRLRRP*
Ga0137383_100990263	3300012199	Vadose Zone Soil	LAKVDTASFALEQAGTLAASVTWVTNSASVTNDDTNKSVTLPATNSAQFFRLRRP*
Ga0137365_107638322	3300012201	Vadose Zone Soil	MASWPSVDTAGFALEQAGTLAVPASWVTNTASVTDDGTNKSVTIPATNSPQFFRLRKS*
Ga0137363_105490861	3300012202	Vadose Zone Soil	LAKVDTASLALEQAGTLAAPASWITNTASITDDGTNKSVTLPATNSAQFFRLRRQ*
Ga0137363_107872122	3300012202	Vadose Zone Soil	EHAASLATPTTWLSNTATVTDDGTNKSVTVPAANPAQFFRLRKP*
Ga0137399_102376382	3300012203	Vadose Zone Soil	QSATLTAPATWVTNSSTITDNGTNKSVTIPATNASQFFRLRRP*
Ga0137374_105742082	3300012204	Vadose Zone Soil	AGFALEHADSLTALASWSTNTASVTDDGTNKWVTLPATNNSRFFRLRRP*
Ga0137362_101526111	3300012205	Vadose Zone Soil	SWVTNAASITDDGTNKSVTLPATNSAQFFRLRRP*
Ga0137362_108574952	3300012205	Vadose Zone Soil	SFDTAGFALEQSGTLATPAIWVTNTASVTDDGTNKSVTLPATKSAQFFRLRRP*
Ga0137362_109950451	3300012205	Vadose Zone Soil	TLAAPPIWITNTASATDDGTNKSVTLPATNSAQFFRLRRP*
Ga0137362_112840142	3300012205	Vadose Zone Soil	PSADTTDFALEQASTLATPPTWRQNTASVTDDATNKSVTIPVTNSFQFFRLRRP*
Ga0137380_110947452	3300012206	Vadose Zone Soil	MVSWPAVDTASFGLEQAGTLAPPASWVTNATSITDDGTNKSVTLPATNSAQFFRLRRP*
Ga0137381_109155711	3300012207	Vadose Zone Soil	SADTVGFALEQAGALAAPASWVSNTASVTDDGTNKSVTLPATNSAQFFRLRRP*
Ga0137381_109806252	3300012207	Vadose Zone Soil	GTLAAPASWVTNAASITDDGTNKSVTIPATNNLQFFRLRRP*
Ga0137381_110349892	3300012207	Vadose Zone Soil	VMVSWLSADTASFTLEQAATLAPPATWVTNTAGITDDGTNKSVTLPATNSAQFFRLRRP*
Ga0137381_110451702	3300012207	Vadose Zone Soil	GALAAPANWVTNSASITDDGTSNSVTLPAADRPQFFRLRRP*
Ga0137379_100233771	3300012209	Vadose Zone Soil	EQAGTLAVPPIWITNTASVTDDGTNKSVTVPASNSAQFFRLRRP*
Ga0137379_116063732	3300012209	Vadose Zone Soil	EQADTLTVPAIWVTNSASITDDGINKSVIFPATNSVQFFRLRKM*
Ga0137379_117381552	3300012209	Vadose Zone Soil	SFDAVGFTLEQSGALLPYLTWVPNTASVTDDGTNKSVILPATNSAQFFRLRGSSTLNPQK
Ga0137377_102486491	3300012211	Vadose Zone Soil	QAGTLATPATWVTNAASVTDDGTNKSVTLPATNSSQFFRLRRP*
Ga0137387_101665621	3300012349	Vadose Zone Soil	ALQQADTLAVPVTWVTNTANVTDDGANKSVTLPATNSPQFFRLRRP*
Ga0137387_104337642	3300012349	Vadose Zone Soil	FTLEQAGTLDAPASWVTNVASVTDDGINKSVTLPATNSAQFIRLRRP*
Ga0137372_102230171	3300012350	Vadose Zone Soil	LAAPASWVTNTASVTDDGTNKSVTIPATNSLQFFRLRRP*
Ga0137372_104111691	3300012350	Vadose Zone Soil	NWVANTSSVTDDGANKSVTIPATNSPQFFRLLRP*
Ga0137372_104166372	3300012350	Vadose Zone Soil	EQAGTLAASVTWVTNSASVTNDDTNKSVTLPATNSAQFFRLRRP*
Ga0137372_108525362	3300012350	Vadose Zone Soil	DTAGFALESAYTLAAPPSWAANSASVTDDGTNKFVTLPATNGAQFFRLRGP*
Ga0137386_110022332	3300012351	Vadose Zone Soil	SWPSVDTAGFALEQAGTLAAPGTWVTNTAGVTDDGTNKSVTIPATNNLQFFRLRRP*
Ga0137367_107581512	3300012353	Vadose Zone Soil	ALAAQTSWITNSASITDDGNNKSVTLPATNGAQFFRLRRP*
Ga0137366_105039342	3300012354	Vadose Zone Soil	LAASGIRVTNTASVTDDSANKSVTIPATNSPQFFRLRRP*
Ga0137369_109445541	3300012355	Vadose Zone Soil	LAAPASWVTNAATVTDDGANKSVTLPATNSRQFFRLRGP*
Ga0137384_107803703	3300012357	Vadose Zone Soil	AGTLTPPVSWFTNAASITDDGTNKSVTVPATNTSQLFRLLR*
Ga0137384_114666872	3300012357	Vadose Zone Soil	QAGTLAATASWVTNSASVTDDGTNKSVIMPATSSPQFFRLRRP*
Ga0137368_102135152	3300012358	Vadose Zone Soil	LEQAGPAGWATNSASISDDGTNKSVTLPATDSPQFFRLRRP*
Ga0137368_106645302	3300012358	Vadose Zone Soil	GLEQAGTLAAPAGWIANTASLTDNGTNKSVTVPATNSPQFFRLRRP*
Ga0137385_114631501	3300012359	Vadose Zone Soil	LAKVDTASFALEQAGTLAASVTWVTNSASVTNDDTNKSVTLPATNSAQFFRLRRP
Ga0137360_102127141	3300012361	Vadose Zone Soil	NALAAPASWVSNSASVSDDGTNKWVTVPATKGAQFFRLRRP*
Ga0137360_108010861	3300012361	Vadose Zone Soil	SWVTNAASITDDGTNKSVTLPATNSPQFFRLRRP*
Ga0137361_100362304	3300012362	Vadose Zone Soil	LAKVDTASLALEQAGTLAAPASWVTNTASVTDDGTNKLVSIPATDSAQFFRVRRP*
Ga0137361_102210091	3300012362	Vadose Zone Soil	LEQAGALAAPASWVTNTASITDDGTNKSVTLPARNSSQFFRLRRP*
Ga0137361_105730771	3300012362	Vadose Zone Soil	MLDTPASWVTNTASITDDGTNKSVSLPATNNSQFFRLKR*
Ga0137361_108040803	3300012362	Vadose Zone Soil	LVPPATWFSNTASVTDDGTNKSVTIPATNSLQFFRLRRP*
Ga0137361_108216631	3300012362	Vadose Zone Soil	DTASFALEQAGTLAAPASWITNTASITDDGTNKSVTLPATNSPQFFRLRRP*
Ga0137361_117296502	3300012362	Vadose Zone Soil	AAPASWVTNNASITDDGTNKSVTITATNGARFFRLRMP*
Ga0137390_111636692	3300012363	Vadose Zone Soil	VSWPSVDTASFTLEQAGTLAPPPSWVTNAASIADDGTNKSVTLPATNSAQFFRLRRP*
Ga0137397_101094523	3300012685	Vadose Zone Soil	VDTQDFTLEQTATLTPAGNWVSNTTPIVDDGTNKSVTIPATNAAQFFRLRRP*
Ga0137395_100796651	3300012917	Vadose Zone Soil	APASWITNTASITDDGTNKSVTLPATNSPQFFRLRRP*
Ga0137395_103839111	3300012917	Vadose Zone Soil	MVSWPSAETASFTLEQAGTLAPPPSWVTNVASITDDGTNKSVTLPATNSPQFFSLRRP*
Ga0137395_108846601	3300012917	Vadose Zone Soil	QAGTLAPPASWVTNAASITADGTNKSVTLPATSSAQFFRLRRR*
Ga0137359_100849833	3300012923	Vadose Zone Soil	VLRFGTDVLVSWPSVDTAGFALEQARRLAAPASWVTNTVSVTDGGTNKSVTVPVKKSPQFFRLRKP*
Ga0137359_101261155	3300012923	Vadose Zone Soil	WPSVDTAGFALEQAGTLAAPASWVTNTASVMDDGTNKSVILPATNSPQFFRLRRP*
Ga0137404_116938291	3300012929	Vadose Zone Soil	RWVTNAASITDDGTNKSVTLPATKRAQFFRLRRP*
Ga0137407_115458751	3300012930	Vadose Zone Soil	QAGTLAAPATWFTNTTSVTDDGTNKSVTVPATNRAQFFRLRGP*
Ga0137410_116511703	3300012944	Vadose Zone Soil	AAPATWLINPSTIIDNGTNKSVTIPSTNSAQFFRLRRP*
Ga0163162_107477531	3300013306	Switchgrass Rhizosphere	ALRSGSDVMLSWPAADTADFALEQAATLAAPSSWRPNTTRITDDGMNKSVTLPATNSPQFFRLRRQ*
Ga0075346_11134001	3300014306	Natural And Restored Wetlands	APAGWVTNSATVTNDGTNKSVTLPATNSSQFFRLRRP*
Ga0180062_11243912	3300014879	Soil	FALEQTGPLAGPASWVTSSATVTNDGTNKSVTLPATNSSQFFRLRRP*
Ga0157376_111554111	3300014969	Miscanthus Rhizosphere	RSSEHVTVSWPSVDTAGFALEQAGLLAAPAGWVPKSATIADDGAKKSVTIPATNSSQLFRLRRP*
Ga0137418_110710241	3300015241	Vadose Zone Soil	VGFTLEQSYNLAAPVEWITNTATIIDDGTNRSVTVPATNAWQFFRLRRP
Ga0180075_10147271	3300015252	Soil	SVDTAGFALEQASTLAAPASWVTNSASVTDDGTNKSVTLPATNSSQFFRLRRP*
Ga0134085_105399561	3300015359	Grasslands Soil	LAAPVNWLTNTSTITDAGTNRSVTIPATNASQFFRLRKP*
Ga0134083_106045492	3300017659	Grasslands Soil	LELAAPANWVANTASVTDDGTNKSVTIPATNNPQFLRLRRP
Ga0187882_11536692	3300018021	Peatland	SWPSADTADFVLEQAGTPASPASWVTNSASVTDDGTNKSVNVPATNPAQFFRLRRP
Ga0066662_114482102	3300018468	Grasslands Soil	GGITVSWPSADTASFTLEQAGALTPPATWVTNAASITDDGANKSVTLPATNRAQFFRLRR
Ga0066669_124573941	3300018482	Grasslands Soil	PAGWVTNSTSVNDDGTNRSVTIPATNSARFFRLHRL
Ga0163150_100271671	3300020195	Freshwater Microbial Mat	ALEQAGPLGAPAGWVTNSATVTDDGANKSVNLPATNSQQFFRLRRP
Ga0163150_101503002	3300020195	Freshwater Microbial Mat	VSWPTVDTTGFALEQAGPLAAPTGWVTNSSTVTFDGANKSVTLSATNSSQFFRLRRP
Ga0163152_102797732	3300020213	Freshwater Microbial Mat	FSVLRFGESVTVSWPAVDTTGFALEQAALLAAPVGWVTNSAALTDDGTKKSVTLPATNISQFFRLRRP
Ga0210382_100815702	3300021080	Groundwater Sediment	SWPSVDTAGFGLEQAGTLATPAGWVTNTASLTDDGANKSVNIPATNSPQFFRLRRP
Ga0207684_117303682	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LAPPVSWVTNAASITDDGTNKSVTLPATNSPQFFRLRRP
Ga0207686_107116842	3300025934	Miscanthus Rhizosphere	LLAAPASWVTNPATVTDDGANKSVTIPATNSSQFFRLRRP
Ga0207704_103663131	3300025938	Miscanthus Rhizosphere	ADFTLEQTAALAASANWLTNTAPIADDGTNKSVTLPATNAAQFFRLRRP
Ga0207691_102995703	3300025940	Miscanthus Rhizosphere	TDSLAAPAGWVTNFATVTDGSAKKSVTLPATSNSQFFRLRRP
Ga0207711_103167512	3300025941	Switchgrass Rhizosphere	MNTADFTLEQSPTLAPESWAPNTATITDDGAKKSLLIPATNDPQFFRLRRP
Ga0207648_103966244	3300026089	Miscanthus Rhizosphere	NVTVFWPADDTAGFALEQTDSLAAPAGWVTNSATVIDGSANKSMTLPGRSNSQFFRLRRP
Ga0209239_12112162	3300026310	Grasslands Soil	DTAGFALEQAGALATPAGWVTNSTSVNDDGTNRSVTIPATNSAWFFRLHRL
Ga0209811_101183511	3300027821	Surface Soil	ASWVPNTASVTDVRANKSVTIPATNSPQFFRLRHP
Ga0209515_104950141	3300027835	Groundwater	GFALEQAGALAAPAGWVTNSATVTDDGTNKSVTLPATNSSQFFRLRRP
Ga0209777_107694092	3300027896	Freshwater Lake Sediment	WPSADTAGFALEQAGTLAAPPSWITNSATVNDDGTNKSVTIPATNTSQFFRLRGP
Ga0268264_107175831	3300028381	Switchgrass Rhizosphere	PAVDAAGFALEQTDSLAAPAGWVTNFAIVTDGSAKKSVTLPATSNSQFFRLRRP
Ga0307468_1023180482	3300031740	Hardwood Forest Soil	GYALEQAGPLAAPSGWVTNSATVTNDGTNKSVTLPATNRSQFFRLRRP
Ga0315290_117277341	3300031834	Sediment	EVIVSWPSVDTAGFGLEQAGTLAAPAGWVANTASVTDNGTNKSVTVPATNSPQFFRLRGP
Ga0315912_113714571	3300032157	Soil	SADTASFTLEQTRTPGLQASWVTNTASVTDDGTDKSVTVPAGNNPQFFRLHRP
Ga0315271_105000862	3300032256	Sediment	GPLAAPAGWVTNSATVTDDGTNKSVTLSATNSSQFFRLRRP
Ga0316622_1002106674	3300033416	Soil	MCRSGPEVLVSWPSPGTADFALEQAAALAAPATWVNNTASVTDGTNRSVALSATNRAQFLRLRRP
Ga0316626_105970071	3300033485	Soil	FALEEAGALAPPATWATNTASVSDDGTTRSVTLPATNNGQFFRLRRP
Ga0364945_0297567_351_503	3300034115	Sediment	LAGFVLEQADSLVTPASWFTNTASVTDDGTTKSVTLPATNSPQFFRLRRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F047748

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences