Metagenome / Metatranscriptome Family F047710

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047710
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	89 residues
Representative Sequence	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFDEPRRARR
Number of Associated Samples	86
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.23 %
% of genes near scaffold ends (potentially truncated)	27.52 %
% of genes from short scaffolds (< 2000 bps)	81.21 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.389 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (29.530 % of family members)
Environment Ontology (ENVO)	Unclassified (52.349 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.376 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 46.61% β-sheet: 0.00% Coil/Unstructured: 53.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF12850	Metallophos_2	4.70
PF02780	Transketolase_C	2.68
PF01436	NHL	2.01
PF00982	Glyco_transf_20	2.01
PF01381	HTH_3	2.01
PF08238	Sel1	1.34
PF09084	NMT1	1.34
PF00239	Resolvase	1.34
PF00072	Response_reg	0.67
PF04055	Radical_SAM	0.67
PF04228	Zn_peptidase	0.67
PF02775	TPP_enzyme_C	0.67
PF01019	G_glu_transpept	0.67
PF07859	Abhydrolase_3	0.67
PF13483	Lactamase_B_3	0.67
PF02922	CBM_48	0.67
PF01656	CbiA	0.67
PF04107	GCS2	0.67
PF02586	SRAP	0.67
PF01717	Meth_synt_2	0.67
PF03992	ABM	0.67
PF05974	DUF892	0.67
PF08924	DUF1906	0.67
PF13289	SIR2_2	0.67
PF04909	Amidohydro_2	0.67
PF13560	HTH_31	0.67
PF14499	DUF4437	0.67
PF02530	Porin_2	0.67
PF02738	MoCoBD_1	0.67
PF05569	Peptidase_M56	0.67
PF02026	RyR	0.67
PF13231	PMT_2	0.67
PF01068	DNA_ligase_A_M	0.67
PF03466	LysR_substrate	0.67
PF13506	Glyco_transf_21	0.67
PF03350	UPF0114	0.67
PF07885	Ion_trans_2	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	2.01
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.34
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.34
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.34
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.34
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.67
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.67
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.67
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.67
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.67
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.67
COG2321	Predicted metalloprotease	General function prediction only [R]	0.67
COG2862	Uncharacterized membrane protein YqhA	Function unknown [S]	0.67
COG3637	Opacity protein LomR and related surface antigens	Cell wall/membrane/envelope biogenesis [M]	0.67
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
All Organisms	root	All Organisms	41.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
cellular organisms	root	All Organisms → cellular organisms	41.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.19 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.67 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.78 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	1.34 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.38 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.34 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.67 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.34 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.34 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.34 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.67 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.67 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.68 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.34 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.34 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.67 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Bradyrhizobium vignae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium vignae	1.34 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.34 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.34 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.67 %
Pseudomonas aeruginosa group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group	0.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Bradyrhizobium vignae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium vignae	1.34 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.34 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.34 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	0.67 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_11420359	Not Available	797	Open in IMG/M
3300002568\|C688J35102_117916674	Not Available	515	Open in IMG/M
3300004153\|Ga0063455_100593584	Not Available	718	Open in IMG/M
3300005163\|Ga0066823_10093215	Not Available	608	Open in IMG/M
3300005332\|Ga0066388_100056272	All Organisms → cellular organisms → Bacteria → Proteobacteria	4109	Open in IMG/M
3300005332\|Ga0066388_100167716	All Organisms → cellular organisms → Bacteria → Proteobacteria	2792	Open in IMG/M
3300005332\|Ga0066388_100235441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2466	Open in IMG/M
3300005332\|Ga0066388_100289514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2282	Open in IMG/M
3300005332\|Ga0066388_100308076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2229	Open in IMG/M
3300005332\|Ga0066388_100343174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2139	Open in IMG/M
3300005332\|Ga0066388_100419343	All Organisms → cellular organisms → Bacteria	1982	Open in IMG/M
3300005332\|Ga0066388_100491602	All Organisms → cellular organisms → Bacteria → Proteobacteria	1864	Open in IMG/M
3300005332\|Ga0066388_100648619	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300005332\|Ga0066388_101107539	Not Available	1342	Open in IMG/M
3300005332\|Ga0066388_101231275	Not Available	1283	Open in IMG/M
3300005332\|Ga0066388_101648882	Not Available	1132	Open in IMG/M
3300005332\|Ga0066388_103849042	Not Available	766	Open in IMG/M
3300005440\|Ga0070705_100600201	Not Available	851	Open in IMG/M
3300005713\|Ga0066905_100137622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1736	Open in IMG/M
3300005713\|Ga0066905_100192629	Not Available	1516	Open in IMG/M
3300005713\|Ga0066905_100203401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1482	Open in IMG/M
3300005713\|Ga0066905_101206372	Not Available	677	Open in IMG/M
3300005713\|Ga0066905_101206838	Not Available	676	Open in IMG/M
3300005713\|Ga0066905_102001863	Not Available	537	Open in IMG/M
3300005713\|Ga0066905_102014581	Not Available	536	Open in IMG/M
3300005764\|Ga0066903_100032250	All Organisms → cellular organisms → Bacteria → Proteobacteria	5962	Open in IMG/M
3300005764\|Ga0066903_100043575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5339	Open in IMG/M
3300005764\|Ga0066903_106150568	Not Available	628	Open in IMG/M
3300005764\|Ga0066903_108438622	Not Available	526	Open in IMG/M
3300005841\|Ga0068863_100126594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2438	Open in IMG/M
3300005843\|Ga0068860_100469626	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300005937\|Ga0081455_10014937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7566	Open in IMG/M
3300005937\|Ga0081455_10825924	Not Available	580	Open in IMG/M
3300005983\|Ga0081540_1026332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3322	Open in IMG/M
3300005983\|Ga0081540_1043729	All Organisms → cellular organisms → Bacteria	2294	Open in IMG/M
3300005983\|Ga0081540_1057754	Not Available	1874	Open in IMG/M
3300005983\|Ga0081540_1340099	Not Available	514	Open in IMG/M
3300006051\|Ga0075364_10858642	Not Available	618	Open in IMG/M
3300006354\|Ga0075021_11114434	Not Available	517	Open in IMG/M
3300006806\|Ga0079220_11612297	Not Available	563	Open in IMG/M
3300006844\|Ga0075428_101372782	Not Available	742	Open in IMG/M
3300006847\|Ga0075431_100324455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1552	Open in IMG/M
3300006854\|Ga0075425_101020235	All Organisms → cellular organisms → Bacteria → Proteobacteria	944	Open in IMG/M
3300006854\|Ga0075425_101335919	Not Available	812	Open in IMG/M
3300006904\|Ga0075424_100309735	Not Available	1681	Open in IMG/M
3300006954\|Ga0079219_11152675	Not Available	664	Open in IMG/M
3300007076\|Ga0075435_101798608	Not Available	538	Open in IMG/M
3300007788\|Ga0099795_10043009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1615	Open in IMG/M
3300009147\|Ga0114129_11337018	Not Available	887	Open in IMG/M
3300009162\|Ga0075423_12977615	Not Available	519	Open in IMG/M
3300010043\|Ga0126380_10004164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5988	Open in IMG/M
3300010043\|Ga0126380_10063749	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300010043\|Ga0126380_10613182	Not Available	859	Open in IMG/M
3300010043\|Ga0126380_11866892	Not Available	545	Open in IMG/M
3300010046\|Ga0126384_10043839	All Organisms → cellular organisms → Bacteria	3045	Open in IMG/M
3300010046\|Ga0126384_10059375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2673	Open in IMG/M
3300010046\|Ga0126384_10175489	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300010046\|Ga0126384_10399795	Not Available	1160	Open in IMG/M
3300010046\|Ga0126384_10429347	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300010046\|Ga0126384_10623905	Not Available	947	Open in IMG/M
3300010046\|Ga0126384_12070144	Not Available	546	Open in IMG/M
3300010047\|Ga0126382_10050477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2433	Open in IMG/M
3300010047\|Ga0126382_10176363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1495	Open in IMG/M
3300010047\|Ga0126382_10261921	Not Available	1274	Open in IMG/M
3300010047\|Ga0126382_10669534	Not Available	865	Open in IMG/M
3300010047\|Ga0126382_10888012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	770	Open in IMG/M
3300010047\|Ga0126382_11242154	Not Available	670	Open in IMG/M
3300010047\|Ga0126382_11284804	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300010147\|Ga0126319_1027761	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300010358\|Ga0126370_11451293	Not Available	650	Open in IMG/M
3300010359\|Ga0126376_10138031	Not Available	1932	Open in IMG/M
3300010359\|Ga0126376_11297162	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	748	Open in IMG/M
3300010359\|Ga0126376_11361709	Not Available	733	Open in IMG/M
3300010359\|Ga0126376_13130202	Not Available	512	Open in IMG/M
3300010360\|Ga0126372_10165783	All Organisms → cellular organisms → Bacteria → Proteobacteria	1790	Open in IMG/M
3300010360\|Ga0126372_10852991	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300010360\|Ga0126372_11407573	Not Available	730	Open in IMG/M
3300010361\|Ga0126378_13253280	Not Available	516	Open in IMG/M
3300010362\|Ga0126377_10025562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4919	Open in IMG/M
3300010362\|Ga0126377_10095498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2701	Open in IMG/M
3300010362\|Ga0126377_10165509	Not Available	2091	Open in IMG/M
3300010362\|Ga0126377_10272563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1657	Open in IMG/M
3300010362\|Ga0126377_10304755	Not Available	1572	Open in IMG/M
3300010362\|Ga0126377_10310345	All Organisms → cellular organisms → Bacteria → Proteobacteria	1559	Open in IMG/M
3300010362\|Ga0126377_10410501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1367	Open in IMG/M
3300010362\|Ga0126377_10891930	All Organisms → cellular organisms → Bacteria → Proteobacteria	952	Open in IMG/M
3300010362\|Ga0126377_11247303	Not Available	815	Open in IMG/M
3300010362\|Ga0126377_12374796	Not Available	606	Open in IMG/M
3300010362\|Ga0126377_13005089	Not Available	544	Open in IMG/M
3300010366\|Ga0126379_10205812	All Organisms → cellular organisms → Bacteria → Proteobacteria	1897	Open in IMG/M
3300010397\|Ga0134124_10061943	All Organisms → cellular organisms → Bacteria	3168	Open in IMG/M
3300010398\|Ga0126383_10116528	All Organisms → cellular organisms → Bacteria → Proteobacteria	2424	Open in IMG/M
3300010398\|Ga0126383_10420691	Not Available	1378	Open in IMG/M
3300012200\|Ga0137382_10329691	Not Available	1068	Open in IMG/M
3300012203\|Ga0137399_11561271	Not Available	548	Open in IMG/M
3300012208\|Ga0137376_11111336	Not Available	676	Open in IMG/M
3300012349\|Ga0137387_10530519	Not Available	854	Open in IMG/M
3300012351\|Ga0137386_10670947	Not Available	745	Open in IMG/M
3300012357\|Ga0137384_10653923	Not Available	855	Open in IMG/M
3300012358\|Ga0137368_10143294	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300012469\|Ga0150984_118090618	Not Available	648	Open in IMG/M
3300012685\|Ga0137397_10000655	All Organisms → cellular organisms → Bacteria → Proteobacteria	23928	Open in IMG/M
3300012929\|Ga0137404_10169429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium vignae	1830	Open in IMG/M
3300012930\|Ga0137407_12006161	Not Available	552	Open in IMG/M
3300012948\|Ga0126375_10257734	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300012948\|Ga0126375_11614213	Not Available	559	Open in IMG/M
3300012971\|Ga0126369_10129077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2343	Open in IMG/M
3300014969\|Ga0157376_10085237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2722	Open in IMG/M
3300015241\|Ga0137418_10118465	All Organisms → cellular organisms → Bacteria	2363	Open in IMG/M
3300015373\|Ga0132257_103616853	Not Available	562	Open in IMG/M
3300017947\|Ga0187785_10285966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	753	Open in IMG/M
3300017997\|Ga0184610_1210102	Not Available	651	Open in IMG/M
3300018028\|Ga0184608_10070564	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300018028\|Ga0184608_10209851	Not Available	854	Open in IMG/M
3300018054\|Ga0184621_10037213	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300018076\|Ga0184609_10555442	Not Available	518	Open in IMG/M
3300018078\|Ga0184612_10245778	Not Available	924	Open in IMG/M
3300018081\|Ga0184625_10162712	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300018431\|Ga0066655_10531275	Not Available	783	Open in IMG/M
3300018466\|Ga0190268_11730783	Not Available	559	Open in IMG/M
3300019259\|Ga0184646_1008868	Not Available	518	Open in IMG/M
3300019789\|Ga0137408_1037127	Not Available	1163	Open in IMG/M
3300020170\|Ga0179594_10067565	Not Available	1240	Open in IMG/M
3300022756\|Ga0222622_11023808	Not Available	607	Open in IMG/M
3300026557\|Ga0179587_10532475	Not Available	772	Open in IMG/M
3300027512\|Ga0209179_1134594	Not Available	552	Open in IMG/M
3300027775\|Ga0209177_10182917	Not Available	734	Open in IMG/M
3300027874\|Ga0209465_10096516	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1448	Open in IMG/M
3300027903\|Ga0209488_10000371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	36934	Open in IMG/M
3300027907\|Ga0207428_10680462	Not Available	737	Open in IMG/M
3300028791\|Ga0307290_10137247	Not Available	896	Open in IMG/M
3300028796\|Ga0307287_10127158	Not Available	966	Open in IMG/M
3300028802\|Ga0307503_10875959	Not Available	518	Open in IMG/M
3300028814\|Ga0307302_10345866	Not Available	733	Open in IMG/M
3300031058\|Ga0308189_10226914	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300031152\|Ga0307501_10035396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium vignae	1047	Open in IMG/M
3300031184\|Ga0307499_10055241	Not Available	985	Open in IMG/M
3300031198\|Ga0307500_10021195	Not Available	1402	Open in IMG/M
3300031199\|Ga0307495_10160733	Not Available	589	Open in IMG/M
3300031421\|Ga0308194_10373011	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300031720\|Ga0307469_12504204	Not Available	504	Open in IMG/M
3300031740\|Ga0307468_100007112	Not Available	4058	Open in IMG/M
3300031740\|Ga0307468_100167439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	1438	Open in IMG/M
3300031740\|Ga0307468_100456068	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300031740\|Ga0307468_101860208	Not Available	572	Open in IMG/M
3300032174\|Ga0307470_11298272	Not Available	596	Open in IMG/M
3300032174\|Ga0307470_11798509	Not Available	519	Open in IMG/M
3300032205\|Ga0307472_100549241	Not Available	1008	Open in IMG/M
3300034819\|Ga0373958_0198637	Not Available	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.23%
Host-Associated	Host-Associated	14.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.85%
Plants	Host-Associated → Plants	14.77%
Aquatic	Environmental → Aquatic	7.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.05%
Sediment	Environmental → Aquatic → Sediment	6.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.04%
Freshwater	Environmental → Aquatic → Freshwater	1.34%
Roots	Host-Associated → Plants → Roots	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.72%
Loam	Environmental → Terrestrial → Soil → Loam	19.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.37%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.34%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.67%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.37%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.01%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.34%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	29.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.04%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.37%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.70%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	4.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.01%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.01%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.34%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.67%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.67%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.67%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_114203592	3300000550	Soil	MRKAILITILTVGAAAISSASSPAAAQYQQCIKGRGCVPASQPSYNDCFNLALARGESVAWGERRRLDWFIYQCLAGRIR*
C688J35102_1179166742	3300002568	Soil	MRKGLLITILAVCAAAISASSSPAQAQYLHCIKGRGCEPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPNRARPRGRG*
Ga0063455_1005935841	3300004153	Soil	MRKGLLITILTVCTAAISAPSSPAQAQYQHCIKGRGCEPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLA
Ga0066823_100932151	3300005163	Soil	MRKVILITILTVSAVAAISAAPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDAPLY
Ga0066388_1000562723	3300005332	Tropical Forest Soil	MRNTALIMIIALSAATALSATSSPAQAQYLRCIKGRGCVPATQASYNRCFNLALARGESAAWGERHRLDWFIYQCLAGRIPF*
Ga0066388_1001677162	3300005332	Tropical Forest Soil	MRNTALIMIIVLGAATALSATSSPAQAQYVRCIKGRGCVPATQASYNRCFNLALARGESAAWGERRRLDWFIYQCLAGRIPF*
Ga0066388_1002354413	3300005332	Tropical Forest Soil	MKAILITILTVGTVAAIAATSSPAPAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERKSLNWFIYQCLEGKIPFDEPRRARPR*
Ga0066388_1002895142	3300005332	Tropical Forest Soil	MRKAILITILTVGAAAAISAPPAQAQYQQCIKGRGCVPASQPSYNDCFNLALARGESSAWGERKSLNWFIYQCLAGKIPFDEPRRARR*
Ga0066388_1003080763	3300005332	Tropical Forest Soil	MKAILVTILTVGAVAAISATSSPAQAQYSQCIKGRGCVPASERSYNACFNLAMARGESAAWGERKSLNWFIYQCLAGRIPFDEPRRARR*
Ga0066388_1003431743	3300005332	Tropical Forest Soil	MRKTALIMIIALGASTTLWATSSPAQARYQQCIKGRGCVPATQRTYDYCFNLALARGESAAWGERRRLDWFIYQCLAGKIPG*
Ga0066388_1004193431	3300005332	Tropical Forest Soil	MRNVLLVAILAVSTTPILAPSSPAQAQYSQCIKGRGCVPASQRSYNDCFNLALARGESVAWGERKRLDWFIYQCLEGKIPFDEPSRARARRPG*
Ga0066388_1004916022	3300005332	Tropical Forest Soil	MRNTALIMIIALGAATTLSATSSPAQAQYVRCIKGRGCVPATQASYNRCFNLALARGESAAWGERRRLDWFIYQCLAGKIPF*
Ga0066388_1006486191	3300005332	Tropical Forest Soil	MRKAILITILSVGGVAGISAATPAQAQYQQCIKGRGCVPTSQRSYNACFNLALARGESAAWGERRSLNWFIYQCLEGKIPFDEPRRARR*
Ga0066388_1011075392	3300005332	Tropical Forest Soil	MHKDILITILTVGAVAAMSAATPAQAQYQQCIKGRGCVPTSQASYNACFNLALARGESSAWGERKSLNWFIYQCLEGKIPFDEPRRARPGRAG*
Ga0066388_1012312752	3300005332	Tropical Forest Soil	MRKVILTAMLAVGAVTAVSTVNSPAQAQYLQCIKGRGCVPATQASYNACFNLALARGESAAWGEHKKLDWFIYQCLAGRIPF*
Ga0066388_1016488821	3300005332	Tropical Forest Soil	MKAILITILTVGAVAAISATNSPAQAQYSQCIKGRGCVPASERSYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPF
Ga0066388_1038490421	3300005332	Tropical Forest Soil	MRNAILTMILVVGAVAAMWTTSSPAQAQYMQCIKGRGCVPASQASYDRCFRLALARGESVAWGERRRLDWFIYQCLAGRIPM*
Ga0070705_1006002011	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRKVILITILTVGAVAAISAAPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDAPLYR*
Ga0066905_1001376224	3300005713	Tropical Forest Soil	MRKAILITILTVGAAAISSASSPAAAQYQQCIKGRGCVPASQPSYNDCFNLALARGESVAWGERRRLDWFIYQCLAGRIPFDEPRRVRRDVPLYR*
Ga0066905_1001926293	3300005713	Tropical Forest Soil	MRNAILITILTVGAVAATSAARSPVQAQYQQCIKGRGCVPASQRSYNDCFNLALARGESAAWGERHSLNWFIYQCLAGKIPFDEPRRARPGRAG*
Ga0066905_1002034012	3300005713	Tropical Forest Soil	MRNTILFAILTVGAVAAISAPRSPAHAQYQQCIKGRGCVPASQPSYDACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPRRARR*
Ga0066905_1012063721	3300005713	Tropical Forest Soil	MPKAILTTMLAVGAVMAASTAQAQYAQCIKGRGCVPTSQASYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFDEPRRAR*
Ga0066905_1012068381	3300005713	Tropical Forest Soil	MKAILVTFLTVGAVAAISAPSSPAQAQYSQCIKGRGCVPASQRSYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFD
Ga0066905_1020018631	3300005713	Tropical Forest Soil	MRKAILITILTVGAVAAISAARSPAQAQYLQCIKGRGCEPTSQASYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFD
Ga0066905_1020145812	3300005713	Tropical Forest Soil	MRKAILITTVAVGAVTAISTVISPAQAQYLQCIKGRGCVPVTQASYNACFNLALARGESAAWGERRRLDWFIYQCLAGRIP
Ga0066903_1000322504	3300005764	Tropical Forest Soil	MKATLITILTVGAVAAISATSSPAQAQYSQCIKGRGCVPASQRSYNACFNLALARGESAAWGERKSLNWFIYQCLAGRIPFDEPNRARLR*
Ga0066903_1000435754	3300005764	Tropical Forest Soil	MKAILVTFLTVGAVAAISAPSSPAQAQYSQCIKGRGCVPASQRSYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFDEPSRARSR*
Ga0066903_1061505682	3300005764	Tropical Forest Soil	MRKVLLISILTVCTAGISAPSSPAQAQYLHCIKGRGCEPTSQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPNRPRARRPG*
Ga0066903_1084386222	3300005764	Tropical Forest Soil	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFDEPRRARR*
Ga0068863_1001265943	3300005841	Switchgrass Rhizosphere	MRKVILITILTVGAVAAISAAPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDA
Ga0068860_1004696261	3300005843	Switchgrass Rhizosphere	MRKVILITILTVGAVAAISAAPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPRRARRDAPLYR*
Ga0081455_100149375	3300005937	Tabebuia Heterophylla Rhizosphere	MRNAILFTILTVGAVAAISTPRSPAQAQYQQCIKGRGCVPASQPSYDACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPRRARR*
Ga0081455_108259241	3300005937	Tabebuia Heterophylla Rhizosphere	MRKAILITILTVGAVAAISAAIPAQAQYQCIKGRGCVPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGRIPFDEPRRARR*
Ga0081540_10263325	3300005983	Tabebuia Heterophylla Rhizosphere	MRKAILTAMLAVGAVTAVSTVNSPAQAQYLECDRWGRGCVPATQASYNACYNLAIARGESPLWGERKKLDWFIFQCLAGRIPR*
Ga0081540_10437293	3300005983	Tabebuia Heterophylla Rhizosphere	MHKAILTTMLAVGVVTAVSTVSSPAEAQYARCISGRGCVPATQASYNACYNLAIARGESPLFGERKSLNWFIYQCLAGRIPR*
Ga0081540_10577541	3300005983	Tabebuia Heterophylla Rhizosphere	MRNVLLVTILAVSTTAILAPSSPAQAQYQQCIKGRGCVPASQQSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDGDSRARGRRPG*
Ga0081540_13400991	3300005983	Tabebuia Heterophylla Rhizosphere	MHKAILITMLAVGAVTAVSTMSSSAQAQYLQCSRGRGCVPATPMSYNACYNLAIARGETSLFGGRRSLDWFIYQCLAGRIPR*
Ga0075364_108586422	3300006051	Populus Endosphere	MRKALLITILTVCTTAISAPNSPAQAQYQQCIKGRGCVPASQRSYDACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEHNRAR
Ga0075021_111144342	3300006354	Watersheds	MRKAILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVLTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDVPLYR*
Ga0079220_116122971	3300006806	Agricultural Soil	RMRKVMLITILTVGAVAVISTARSPAQAQYSQCIKGRGCVPASQASYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPRRARRDAPLYR*
Ga0075428_1013727822	3300006844	Populus Rhizosphere	MRKALLITILTVCTTAISAPNSPAQAQYQQCIKGRGCVPTSQRSYDACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEHNRARPRRPS*
Ga0075431_1003244552	3300006847	Populus Rhizosphere	MRKALLITILTVCTTAISAPNSPAQAQYQQCIKGRGCVPASQRSYDACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEHNRARPRRPS*
Ga0075425_1010202353	3300006854	Populus Rhizosphere	MRKALLITILTVCTTAISAPNSPAQAQYQQCIKGRGCVPTSQRSYDACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDE
Ga0075425_1013359192	3300006854	Populus Rhizosphere	MRNVLLVTILAVSTMAILAPSSPAHAQYQQCIKGRGCVPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDGNDRTRARRRG*
Ga0075424_1003097352	3300006904	Populus Rhizosphere	MRNVLLVTILAVSTMAILAPSSPAHAQYQQCIKGRGCVPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDGESRARARRRG*
Ga0079219_111526752	3300006954	Agricultural Soil	MRNVLLATILAVSTAAIFATSSPAQAQYQQCIKGRGCVPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDGNDRTRARRPG*
Ga0075435_1017986081	3300007076	Populus Rhizosphere	MRKAILITILTVGAVAAISTARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDVPLYR*
Ga0099795_100430093	3300007788	Vadose Zone Soil	MRKVILITVLTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDVPLYR*
Ga0114129_113370181	3300009147	Populus Rhizosphere	MRNTALIIIIALGAATALSATRSPAQAQYLRCIKGRGCVPATQADYNRCFNLALARGESAAWGERRSLDWFIYQCLAGRIPF*
Ga0075423_129776151	3300009162	Populus Rhizosphere	MRKVMLITILTVGAVAVISTARSPAQAQYSQCIKGRGCVPASQASYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPRRARRDAPLYR*
Ga0126380_1000416410	3300010043	Tropical Forest Soil	MRKPILITILTVGAVAISAASSPAQAQYSQCIKGRGCEPATQRSYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFDEPSRARSR*
Ga0126380_100637491	3300010043	Tropical Forest Soil	MRNVLLVAILAVSTTPILAPSSPAQAQYSQCIKGRGCVPASQRSYNDCFNLALARGESAAWGERRSLNWFIYQCLAGKIP
Ga0126380_106131822	3300010043	Tropical Forest Soil	MRKAILTTMLAVGAVTAVSTPSSPAQAQYAQCIKGRGCVPTSQASYNACYNLALARGESVAWGERKSLNWFIYQCLAGKIPFDEPRRAR*
Ga0126380_118668922	3300010043	Tropical Forest Soil	MRKSILITILTVGAVAISAASSPAQAQYSQCIKGRGCEPASQRSYNACFNLALARGESAAWGERKSLNWFIYQCL
Ga0126384_100438393	3300010046	Tropical Forest Soil	MRNTALIMIIALGAAMALSATNSPAQAQYQRCIKGRGCVPATQASYNRCFNLALARGESAAWGERRRLDWFIYQCLAGKIPF*
Ga0126384_100593751	3300010046	Tropical Forest Soil	MHKAILTTMLAVGAVTAVSSVSSPAQAQYAQCIRGRGCVPATQASYNACYNLAIARGESPLFGERRSLNWFIYQCLAGRIPR*
Ga0126384_101754892	3300010046	Tropical Forest Soil	MRKAILITILTVGAVAVISAARSPAQAQYLQCIKGRGCEPTSQASYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFDEPKRARR*
Ga0126384_103997952	3300010046	Tropical Forest Soil	MRNVLLVAILAVSTTPILAPSSPAQAQYSQCIKGRGCVPASQRSYNACFNLALARGESAAWGERKSLNWFIYQ
Ga0126384_104293471	3300010046	Tropical Forest Soil	MRNTALIMIIVLGATTALSATSSPAQAQYVRCIKGRGCVPATQASYNRCFNLALARGESAAWGERRRLDWFIYQCLAGRIPF*
Ga0126384_106239051	3300010046	Tropical Forest Soil	MRKSILITILTVGAVAISAASSPAQAQYSQCIKGRGCEPATQRSYNACFNLALARGESAAWGERKSLNWFIYQ
Ga0126384_120701441	3300010046	Tropical Forest Soil	FTSLNPARRHRMRNAILFTILTVGAAAVISAPNSPAQAQYQHCIRGRGCEPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGRIPFDEPNRARPRRGG*
Ga0126382_100504772	3300010047	Tropical Forest Soil	MPKAILTTMLAVGAVMAASTAQAQYAQCIKGRGCVPTSQASYNACYNLALARGESVAWGERKSLNWFIYQCLAGKIPFDEPRRAR*
Ga0126382_101763632	3300010047	Tropical Forest Soil	MRNALLITILAFSTTAISVPSSPAQAQYQCIKGRGCVPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDGQSRARARRPG*
Ga0126382_102619211	3300010047	Tropical Forest Soil	GLTQPCKEAPMRKVILTAMLAVGAVTAVSTVNSPAQAQYLQCIKGRGCVPATQASYNACFNLALARGESAAWGEHKKLDWFIYQCLAGRIPF*
Ga0126382_106695342	3300010047	Tropical Forest Soil	MRKALLVTILTVCTTAISAPSSPAQAQYQQCIKGRGCVPASQRSYNDCFNLALARGESVAWGERKRLDWFIYQCLEGKIPFDEPSRARARRPG*
Ga0126382_108880121	3300010047	Tropical Forest Soil	MRKAILITILTVGAVAAISAARSPAQAQYLQCIKGRGCEPTSQASYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFDEPKRARR*
Ga0126382_112421542	3300010047	Tropical Forest Soil	VAAISAPRSPAQAQYQQCIKGRGCVPASQPSYNDCFNLALARGESVAWGERRRLDWFIYQCLAGRIPFDEPRRARR*
Ga0126382_112848041	3300010047	Tropical Forest Soil	ILTVGAVAAISAPRSPAQAQYLQCIKGRGCVPASQASYNACFNLALARGESSAWGERKSLNWFIYQCLAGKIPFDEPRRARR*
Ga0126319_10277612	3300010147	Soil	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCIPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDVPLYR*
Ga0126370_114512931	3300010358	Tropical Forest Soil	MRNTILFTILTVGAVAAVSAPRSPAQAQYQQCIKGRGCVPTSQASYNACFNLALARGESSAWGERKSLNWFIYQCLEGKIPFDEPRRARR*
Ga0126376_101380314	3300010359	Tropical Forest Soil	MRKAILITILTVGAVAAISAARSPAQAQYLQCIKGRGCEPTSQASYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFDEPSRARSR*
Ga0126376_112971621	3300010359	Tropical Forest Soil	NTALIMIIALGAATTLSATSSPAQAQYVRCIKGRGCVPATQASYNRCFNLALARGESAAWGERRRLDWFIYQCLAGKIPF*
Ga0126376_113617091	3300010359	Tropical Forest Soil	MRKAILTTMLAVGAVTAVSTPSSPAQAQYAQCIKGRGCVPTSQASYNACYNLALARGESVAWGERKSLNWFIYQCLAGKIPFDDKRPR*
Ga0126376_131302022	3300010359	Tropical Forest Soil	MRNALLITLLAFSTTAISVPSSPAQAQYQCIKGRGCVPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDGHSRARAR*
Ga0126372_101657832	3300010360	Tropical Forest Soil	MRKAILITILTVGAAAVISAPNSPAQAQYQHCIRGRGCEPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGRIPFDEPNRARPRRGG*
Ga0126372_108529912	3300010360	Tropical Forest Soil	MRNTALIMIIVLGAATALSATSSPAQAQYVRCIKGRGCVPATQASYNRCFNLALARGESAAWGERHRLDWFIYQCLAGRIPF*
Ga0126372_114075732	3300010360	Tropical Forest Soil	MKAILITILTVGAVAAISATSSPAQAQYSQCIKGRGCVPASQRSYNACFNLALARGESAAWGERKSLNWFIYQCLAG
Ga0126378_132532801	3300010361	Tropical Forest Soil	MRNTALIMIIVLGAATALSATSSPAQAQYVRCIKGRGCVPATQASYNRCFNLALARGESAAWGERRRLDWFIYQCLAGKIPF*
Ga0126377_100255629	3300010362	Tropical Forest Soil	MRKAILITILTVGAAAISSASSPAAAQYQQCIKGRGCVPASQPSYNDCFNLALARGESVAWGERRRLDWFIYQCLAGRIPFDEPRRARRNVPLYR*
Ga0126377_100954983	3300010362	Tropical Forest Soil	MRKAILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDVPLYR*
Ga0126377_101655094	3300010362	Tropical Forest Soil	MRNAILFTILTVGVVAAISAPRSPAQAQYQQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLEGKIPFDEPKRARPR*
Ga0126377_102725634	3300010362	Tropical Forest Soil	MRKAILITILTVGAVAAISAARSPAQAQYLQCIKGRGCEPTSQASYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFDE
Ga0126377_103047552	3300010362	Tropical Forest Soil	MHKAIIITMLAVGAATAVSTVSSPAQAQYAQCIRGRGCVPATQASYNACYNLAIARGESPFWGERKSLNWFIYQCLAGRIPR*
Ga0126377_103103453	3300010362	Tropical Forest Soil	MRNTALIMIIALSAATALSATSSPAQAQYVRCIKGRGCVPATQASYNRCFNLALARGESAAWGERRRLDWFIYQCLAGRIPF*
Ga0126377_104105013	3300010362	Tropical Forest Soil	MKAILVTFLTVGAVAAISAPSSPAQAQYSQCIKGRGCVPASQRSYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFDE
Ga0126377_108919302	3300010362	Tropical Forest Soil	MRNAILITILTVGAVAAISAPRSPAQAQYLQCIKGRGCVPASQASYNACFNLALARGESSAWGERKSLNWFIYQCLAGKIPFDEPRRARR*
Ga0126377_112473032	3300010362	Tropical Forest Soil	MRKAILTTMLAVGAVTAVSTVNSPALAQYLECDRWGRGCVPATQASYNACYNLAIARGESPLWGERKRLDWFIFQCLAGRIPR*
Ga0126377_123747962	3300010362	Tropical Forest Soil	MRKAILITILSVGAVAAISAARSPAQAQYLQCIKGRGCVPASQASYNACFNLALARGESSAWGERRSLNWFIYQCPAGEIPR*
Ga0126377_130050892	3300010362	Tropical Forest Soil	MRKAIPIAILVVGAAVISAPSSPAQAQYLHCIKGRGCEPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPRRAR
Ga0126379_102058122	3300010366	Tropical Forest Soil	MKAILVTFLTVGAVAAISAPSSPAQAQYSQCIKGRGCVPASQRSYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFDEPNRARLR*
Ga0134124_100619431	3300010397	Terrestrial Soil	MRKVILITILTVGAVAAISAAPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEP
Ga0126383_101165283	3300010398	Tropical Forest Soil	MRNTALIMIIALGAATTLSATSSPAQAQYVRCIKGRGCVPATQASYNRCFNLALARGESAAWGERRRLDWFIYQCLAGRIPF*
Ga0126383_104206911	3300010398	Tropical Forest Soil	VRRHLVRKAILIAILTVGPLAAISAARPPAQAQYLQCIKGRGCVPASQASYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFDEPSRARSR*
Ga0137382_103296911	3300012200	Vadose Zone Soil	MRKVILITVLTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYDACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDGPLYR*
Ga0137399_115612711	3300012203	Vadose Zone Soil	MRKVILITVLTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYDACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDVPLYR*
Ga0137376_111113361	3300012208	Vadose Zone Soil	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGRIPFDEPRRARRDGPLYR*
Ga0137387_105305192	3300012349	Vadose Zone Soil	TILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRVRRDVPLYR*
Ga0137386_106709472	3300012351	Vadose Zone Soil	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRVRRDVPLYR*
Ga0137384_106539231	3300012357	Vadose Zone Soil	MRKAILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRVRRDVPLYR*
Ga0137368_101432943	3300012358	Vadose Zone Soil	MRNTALIMIIAVAAATALSATSSPAQAQYLQCIKGRGCVPATQASYDRCFRLALARGESAAWGERRRLDWFIHQCLAGKIPF*
Ga0150984_1180906182	3300012469	Avena Fatua Rhizosphere	MRKALLITVLTVCTAAISGPTSPAQAQYLHCIKGRGCEPTSQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPNRARSPRPG*
Ga0137397_1000065513	3300012685	Vadose Zone Soil	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYDACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDAPLYR*
Ga0137404_101694293	3300012929	Vadose Zone Soil	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYDACFNLALARGESSAWGERRSLNWFIYQCLAGRIPFDEPRRARRDGPLYR*
Ga0137407_120061611	3300012930	Vadose Zone Soil	MRKAILTTMLAVGAVTAASTVSSPAQAQYQQCIRGRGCVPATQASYNACYNLAIARGESPFWGERRSLNWFIYQCLAGRIPF*
Ga0126375_102577343	3300012948	Tropical Forest Soil	MRKDILITILTVGAVAAMSAATPAQAQYQQCIKGRGCVPASQQSYNACFNLALARGESATWGERRSLNWFIY
Ga0126375_116142131	3300012948	Tropical Forest Soil	MRKAILTTMLAVGAVTAVSTVNSPSQAQYLQCIKGRGCVPATQASYNACFNLALARGESAAWGEHKKLDWFIYQCLAGRIPR*
Ga0126369_101290772	3300012971	Tropical Forest Soil	MRKAILITILSVGGVAGISAATPAQAHYQQCIKGRGCVPTSQRSYNACFNLALARGESAAWGERRSLNWFIYQCLEGKIPFDEPRRARR*
Ga0157376_100852374	3300014969	Miscanthus Rhizosphere	MRKVILITILTVGAVAAISAAPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPF
Ga0137418_101184651	3300015241	Vadose Zone Soil	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDVPLYR*
Ga0132257_1036168531	3300015373	Arabidopsis Rhizosphere	RKVILITILTVGAVAAISAAPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEHNRARPRRPS*
Ga0187785_102859662	3300017947	Tropical Peatland	MRKAILITILTVGAATVISSPSSPAQAQYLHCIKGRGCEPASQRSYNACFNLALARGESAAWGERRSLNWFI
Ga0184610_12101022	3300017997	Groundwater Sediment	MRQVIMTTMLTIGVVSAFLNCPAQAQYAVCIPARGCAPATQASYNACFNLALARGESVAWGERRRLDWFIYQCLAGRIPR
Ga0184608_100705641	3300018028	Groundwater Sediment	RKVILVTILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGRIPFDEPRRARRDGPLYR
Ga0184608_102098511	3300018028	Groundwater Sediment	MRKATLITILTVGAAVAILSASSTAEAQYQQCIKGRGCVPTSQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDGNSRAQVRRPGSR
Ga0184621_100372131	3300018054	Groundwater Sediment	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGRIPFDEPRRARRDGPLYR
Ga0184609_105554422	3300018076	Groundwater Sediment	MQKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGRIPFDEPRRARRDGPLYR
Ga0184612_102457781	3300018078	Groundwater Sediment	MQKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDVPLYR
Ga0184625_101627121	3300018081	Groundwater Sediment	MRKAILITILTVGAAAAISSASSPAEAQYQQCIKGRGCVPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPRRARRDVPLYR
Ga0066655_105312752	3300018431	Grasslands Soil	GAVAATSATSSPAHAQYSQCIKGRGCVPASERSYNACFNLALARGESAAWGERKSLNWFIYQCLAGKIPFDEPKRARR
Ga0190268_117307831	3300018466	Soil	MRNTALIMTIALGASTALWATSSPAQAQYQQCIKGRGCVPATQASYNRCFNLALARGESAAWGERRRLDWFIYQCLAGKIPG
Ga0184646_10088681	3300019259	Groundwater Sediment	MRKVILVTILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGRIPFDEPRRARRDGPLYR
Ga0137408_10371272	3300019789	Vadose Zone Soil	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYDACFNLALARGESSAWGERRSLNWFIYQCLAGRIPFDEPRRARRDGPLYR
Ga0179594_100675652	3300020170	Vadose Zone Soil	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDVPLYR
Ga0222622_110238081	3300022756	Groundwater Sediment	AAVAILSASSTAEAQYQQCIKGRGCVPTSQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDGNSRAQARRPGSR
Ga0179587_105324751	3300026557	Vadose Zone Soil	MRKAILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDVPLYR
Ga0209179_11345941	3300027512	Vadose Zone Soil	MRKVILITVLTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLA
Ga0209177_101829171	3300027775	Agricultural Soil	MRKVMLITILTVGAVAVISTARSPAQAQYSQCIKGRGCVPASQASYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPRRARRDAPLYR
Ga0209465_100965163	3300027874	Tropical Forest Soil	MRNTALIMIIVLGAATALSATSSPAQAQYVRCIKGRGCVPATQASYNRCFNLALARGESAAWGERRRLDWFIYQCLAGRIPF
Ga0209488_100003713	3300027903	Vadose Zone Soil	MRKVILITVLTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDVPLYR
Ga0207428_106804621	3300027907	Populus Rhizosphere	MRKALLITILTVCTTAISAPNSPAQAQYQQCIKGRGCVPTSQRSYDACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEHNRARPRRPS
Ga0307290_101372472	3300028791	Soil	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDGPLYR
Ga0307287_101271582	3300028796	Soil	VGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDVPLYR
Ga0307503_108759591	3300028802	Soil	TVGAVAAISAAPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDAPLYR
Ga0307302_103458662	3300028814	Soil	MRKVILVTILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYDACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDGPLYR
Ga0308189_102269141	3300031058	Soil	GLLITILTVCTAAISAPSSPAQAQYQHCIKGRGCEPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPNRARPRRRG
Ga0307501_100353961	3300031152	Soil	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDAPLYR
Ga0307499_100552412	3300031184	Soil	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYDACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDAPLYR
Ga0307500_100211951	3300031198	Soil	MRKVILITILTVSAVAAISAAPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCL
Ga0307495_101607332	3300031199	Soil	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWDGRRSLNWFIYQCLAGKIPFDE
Ga0308194_103730111	3300031421	Soil	MRKVILITILTVGAVAAISAARSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDVPAIR
Ga0307469_125042041	3300031720	Hardwood Forest Soil	MRNVLLVTILAVSTTTILAPSSPAQAQYQQCIKGRGCVPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPRRARR
Ga0307468_1000071126	3300031740	Hardwood Forest Soil	MRKAILITILTVAAAAAISSASSPAEAQSQCIKGRGCVPATERSYNACFNLALARGESVAWGERRRLDWFIYQCLAGKIPFDEPRRARRDVPLYR
Ga0307468_1001674391	3300031740	Hardwood Forest Soil	MRNAILTMILVVGAVAAMWTMSSPAQAQYMQCIKGRGCVPASQASYDRCFRLALARGESVAWGERRRLDWFIYQCLAGRIPM
Ga0307468_1004560681	3300031740	Hardwood Forest Soil	MRNAILITILTVGAAAAISTASSPAEAQYQQCIKGRGCVPASQRSYNDCFNLALARGESAAWGERRSLNWFIYQCLAGRIPFDEPRRARRDVPTYR
Ga0307468_1018602082	3300031740	Hardwood Forest Soil	MRKVILITILTVGAVAAISSASSPAEAQYSQCIKGRGCVPTSQASYDACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPRRARRDAPLYR
Ga0307470_112982722	3300032174	Hardwood Forest Soil	MRNAILITILTVGAAAAISSASSPAEAQSQQCIKGRGCVPASQPSYNACFNLALARGESVAWGERRRLDWFIYQCLAGKIPFDEPRRARRDVPLYR
Ga0307470_117985092	3300032174	Hardwood Forest Soil	VTILAVSTTTILAPSSPAQAQYQQCIKGRGCVPASQRSYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPNRARPRRPG
Ga0307472_1005492411	3300032205	Hardwood Forest Soil	MRKAILITILTVGAVAAISSASSPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESAAWGERRSLNWFIYQCLAGKIPFDEPRRARRDAPLYR
Ga0373958_0198637_24_308	3300034819	Rhizosphere Soil	MRKVILITILTVGAVAAISAAPAQAQYSQCIKGRGCVPTSQASYNACFNLALARGESSAWGERRSLNWFIYQCLAGKIPFDEPRRARRDAPLYR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047710

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences