Metagenome / Metatranscriptome Family F047262

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F047262
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	46 residues
Representative Sequence	AATLNALDGAITSNMAIVPTTNGSISVFGSNPTYLILDNFGYFAP
Number of Associated Samples	118
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.14 %
% of genes near scaffold ends (potentially truncated)	88.00 %
% of genes from short scaffolds (< 2000 bps)	86.67 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (64.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (12.000 % of family members)
Environment Ontology (ENVO)	Unclassified (24.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 2.74% Coil/Unstructured: 97.26%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF01820	Dala_Dala_lig_N	2.67
PF13620	CarboxypepD_reg	2.00
PF07478	Dala_Dala_lig_C	2.00
PF02245	Pur_DNA_glyco	2.00
PF00106	adh_short	1.33
PF01436	NHL	1.33
PF00313	CSD	1.33
PF01555	N6_N4_Mtase	0.67
PF03091	CutA1	0.67
PF00456	Transketolase_N	0.67
PF13418	Kelch_4	0.67
PF06210	DUF1003	0.67
PF05593	RHS_repeat	0.67
PF03551	PadR	0.67
PF04379	DUF525	0.67
PF13439	Glyco_transf_4	0.67
PF04542	Sigma70_r2	0.67
PF03050	DDE_Tnp_IS66	0.67
PF14319	Zn_Tnp_IS91	0.67
PF00854	PTR2	0.67
PF00117	GATase	0.67
PF05199	GMC_oxred_C	0.67
PF13360	PQQ_2	0.67
PF00589	Phage_integrase	0.67
PF00005	ABC_tran	0.67
PF07969	Amidohydro_3	0.67
PF02223	Thymidylate_kin	0.67
PF08448	PAS_4	0.67
PF16640	Big_3_5	0.67
PF14312	FG-GAP_2	0.67
PF01904	DUF72	0.67
PF13641	Glyco_tranf_2_3	0.67
PF04909	Amidohydro_2	0.67
PF13229	Beta_helix	0.67
PF13751	DDE_Tnp_1_6	0.67
PF07676	PD40	0.67
PF00069	Pkinase	0.67
PF01450	IlvC	0.67
PF00202	Aminotran_3	0.67
PF04366	Ysc84	0.67
PF03928	HbpS-like	0.67
PF03720	UDPG_MGDP_dh_C	0.67
PF01935	DUF87	0.67
PF05685	Uma2	0.67
PF09411	PagL	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.67
COG1181	D-alanine-D-alanine ligase or related ATP-grasp enzyme	Cell wall/membrane/envelope biogenesis [M]	2.67
COG2094	3-methyladenine DNA glycosylase Mpg	Replication, recombination and repair [L]	2.00
COG0059	Ketol-acid reductoisomerase	Amino acid transport and metabolism [E]	1.33
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	0.67
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	0.67
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.67
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.67
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.67
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.67
COG1324	Divalent cation tolerance protein CutA	Inorganic ion transport and metabolism [P]	0.67
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.67
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.67
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.67
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.67
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.67
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.67
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.67
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.67
COG2967	Uncharacterized conserved protein ApaG affecting Mg2+/Co2+ transport	Inorganic ion transport and metabolism [P]	0.67
COG3104	Dipeptide/tripeptide permease	Amino acid transport and metabolism [E]	0.67
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.67
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.67
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	0.67
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.67
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.67
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.67 %
Unclassified	root	N/A	35.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.67 %
Unclassified	root	N/A	35.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.67 %
Unclassified	root	N/A	35.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.33 %
Unclassified	root	N/A	35.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.67 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.33 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.67 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.67 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4.00 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	2.67 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	1.33 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.33 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.67 %
Micropepsales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales	0.67 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.67 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	2.67 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.33 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	1.33 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.33 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.67 %
Micropepsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae	0.67 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.67 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.67 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2.67 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	2.00 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1.33 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.33 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.67 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.67 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	0.67 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.67 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.67 %
Rhizomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium	0.67 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.67 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2.67 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	2.00 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1.33 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.33 %
Nostoc	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	0.67 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.67 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	0.67 %
unclassified Rhizomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium	0.67 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.67 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	0.67 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.67 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2.67 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	2.00 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1.33 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.33 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.67 %
Ilumatobacter coccineus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter coccineus	0.67 %
Rhizomicrobium sp. SCGC AG-212-E05	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium → Rhizomicrobium sp. SCGC AG-212-E05	0.67 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.67 %
Nostoc	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	0.67 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.67 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002914\|JGI25617J43924_10200703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300004114\|Ga0062593_102443920	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300004479\|Ga0062595_100084652	Not Available	1620	Open in IMG/M
3300004479\|Ga0062595_101481126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300004479\|Ga0062595_101701920	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300004479\|Ga0062595_102360664	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300005337\|Ga0070682_102045983	Not Available	504	Open in IMG/M
3300005434\|Ga0070709_10457376	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300005434\|Ga0070709_10862008	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005435\|Ga0070714_101506103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300005435\|Ga0070714_101671044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	622	Open in IMG/M
3300005436\|Ga0070713_102368330	Not Available	514	Open in IMG/M
3300005437\|Ga0070710_10863425	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	651	Open in IMG/M
3300005439\|Ga0070711_100666827	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300005518\|Ga0070699_100896140	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300005531\|Ga0070738_10006251	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12614	Open in IMG/M
3300005541\|Ga0070733_10048544	All Organisms → cellular organisms → Bacteria → Acidobacteria	2657	Open in IMG/M
3300005541\|Ga0070733_10843256	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300005541\|Ga0070733_10964194	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005542\|Ga0070732_10410880	Not Available	817	Open in IMG/M
3300005542\|Ga0070732_10958822	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005614\|Ga0068856_101590530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300005944\|Ga0066788_10056984	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300006055\|Ga0097691_1147529	Not Available	631	Open in IMG/M
3300006059\|Ga0075017_101464197	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300006162\|Ga0075030_101603805	Not Available	509	Open in IMG/M
3300006162\|Ga0075030_101655892	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	500	Open in IMG/M
3300006173\|Ga0070716_100934286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	681	Open in IMG/M
3300006173\|Ga0070716_101214940	Not Available	606	Open in IMG/M
3300006358\|Ga0068871_100954157	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300006797\|Ga0066659_10155722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1629	Open in IMG/M
3300006806\|Ga0079220_10861128	Not Available	696	Open in IMG/M
3300007265\|Ga0099794_10300005	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300009089\|Ga0099828_11330264	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300009090\|Ga0099827_10003747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8763	Open in IMG/M
3300009090\|Ga0099827_10015365	All Organisms → cellular organisms → Bacteria	5136	Open in IMG/M
3300009137\|Ga0066709_100024879	All Organisms → cellular organisms → Bacteria	6163	Open in IMG/M
3300009137\|Ga0066709_101683548	Not Available	901	Open in IMG/M
3300009148\|Ga0105243_12977497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300009177\|Ga0105248_13035864	Not Available	534	Open in IMG/M
3300009523\|Ga0116221_1208055	All Organisms → cellular organisms → Bacteria → Acidobacteria	847	Open in IMG/M
3300009551\|Ga0105238_12686242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300009644\|Ga0116121_1085263	Not Available	988	Open in IMG/M
3300010048\|Ga0126373_13073666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter coccineus	520	Open in IMG/M
3300010362\|Ga0126377_13212356	Not Available	528	Open in IMG/M
3300010373\|Ga0134128_10891496	Not Available	985	Open in IMG/M
3300010399\|Ga0134127_13131217	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300011120\|Ga0150983_14352126	Not Available	596	Open in IMG/M
3300011120\|Ga0150983_14657792	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	573	Open in IMG/M
3300011120\|Ga0150983_14787521	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300011269\|Ga0137392_10882345	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300011270\|Ga0137391_11046484	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	663	Open in IMG/M
3300012189\|Ga0137388_11017433	Not Available	764	Open in IMG/M
3300012211\|Ga0137377_11422856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	621	Open in IMG/M
3300012212\|Ga0150985_112866831	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	554	Open in IMG/M
3300012361\|Ga0137360_10794536	Not Available	814	Open in IMG/M
3300012362\|Ga0137361_11712268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300012363\|Ga0137390_10771811	All Organisms → cellular organisms → Bacteria → Acidobacteria	920	Open in IMG/M
3300012469\|Ga0150984_123456029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	570	Open in IMG/M
3300012917\|Ga0137395_10186557	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300012917\|Ga0137395_11122093	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300012922\|Ga0137394_11415545	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	556	Open in IMG/M
3300012927\|Ga0137416_11707891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300012927\|Ga0137416_11888052	Not Available	547	Open in IMG/M
3300012971\|Ga0126369_12854123	Not Available	566	Open in IMG/M
3300012986\|Ga0164304_10294018	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300012989\|Ga0164305_11658900	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300012989\|Ga0164305_12089187	Not Available	519	Open in IMG/M
3300013105\|Ga0157369_10339484	Not Available	1560	Open in IMG/M
3300013297\|Ga0157378_10206546	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300013297\|Ga0157378_10555898	Not Available	1154	Open in IMG/M
3300013307\|Ga0157372_11982359	Not Available	669	Open in IMG/M
3300014156\|Ga0181518_10311478	Not Available	781	Open in IMG/M
3300014162\|Ga0181538_10339349	All Organisms → cellular organisms → Bacteria → Acidobacteria	810	Open in IMG/M
3300014200\|Ga0181526_10162181	Not Available	1433	Open in IMG/M
3300014201\|Ga0181537_10396272	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300014491\|Ga0182014_10083538	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1990	Open in IMG/M
3300014491\|Ga0182014_10134518	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300014491\|Ga0182014_10373161	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300014502\|Ga0182021_10942474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium → Rhizomicrobium sp. SCGC AG-212-E05	1038	Open in IMG/M
3300014658\|Ga0181519_10197616	Not Available	1268	Open in IMG/M
3300014838\|Ga0182030_11214547	Not Available	643	Open in IMG/M
3300014839\|Ga0182027_10048438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5342	Open in IMG/M
3300015193\|Ga0167668_1051117	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300015193\|Ga0167668_1102973	Not Available	525	Open in IMG/M
3300015245\|Ga0137409_11104672	Not Available	632	Open in IMG/M
3300017975\|Ga0187782_11647506	Not Available	507	Open in IMG/M
3300017988\|Ga0181520_10436126	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	942	Open in IMG/M
3300017988\|Ga0181520_10446381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	927	Open in IMG/M
3300018034\|Ga0187863_10039299	All Organisms → cellular organisms → Bacteria	2750	Open in IMG/M
3300018034\|Ga0187863_10312096	Not Available	874	Open in IMG/M
3300018037\|Ga0187883_10030600	Not Available	2922	Open in IMG/M
3300018038\|Ga0187855_10338295	All Organisms → cellular organisms → Bacteria → Acidobacteria	879	Open in IMG/M
3300018043\|Ga0187887_10273188	Not Available	999	Open in IMG/M
3300018044\|Ga0187890_10296347	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	908	Open in IMG/M
3300018044\|Ga0187890_10389242	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300018044\|Ga0187890_10723493	Not Available	562	Open in IMG/M
3300019789\|Ga0137408_1190655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	762	Open in IMG/M
3300021374\|Ga0213881_10080626	Not Available	1397	Open in IMG/M
3300021374\|Ga0213881_10165583	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300021377\|Ga0213874_10304017	Not Available	601	Open in IMG/M
3300021420\|Ga0210394_10555224	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300021559\|Ga0210409_10115692	All Organisms → cellular organisms → Bacteria → Acidobacteria	2467	Open in IMG/M
3300022724\|Ga0242665_10346714	Not Available	531	Open in IMG/M
3300025544\|Ga0208078_1023695	All Organisms → cellular organisms → Bacteria → Proteobacteria	1378	Open in IMG/M
3300025579\|Ga0207927_1117271	Not Available	587	Open in IMG/M
3300025619\|Ga0207926_1097817	Not Available	718	Open in IMG/M
3300025898\|Ga0207692_10440649	Not Available	818	Open in IMG/M
3300025906\|Ga0207699_10748768	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300025906\|Ga0207699_11264558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300025916\|Ga0207663_10185832	All Organisms → cellular organisms → Bacteria → Acidobacteria	1488	Open in IMG/M
3300025928\|Ga0207700_10823080	Not Available	831	Open in IMG/M
3300025949\|Ga0207667_11663834	Not Available	606	Open in IMG/M
3300026078\|Ga0207702_11763670	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	611	Open in IMG/M
3300027795\|Ga0209139_10007007	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4246	Open in IMG/M
3300027867\|Ga0209167_10007107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5430	Open in IMG/M
3300027910\|Ga0209583_10172571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	902	Open in IMG/M
3300027911\|Ga0209698_10904392	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300027965\|Ga0209062_1013999	All Organisms → cellular organisms → Bacteria → Acidobacteria	5580	Open in IMG/M
3300029636\|Ga0222749_10449748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300029944\|Ga0311352_10427973	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300031239\|Ga0265328_10350677	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300031446\|Ga0170820_16341184	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300031524\|Ga0302320_11740747	Not Available	598	Open in IMG/M
3300031718\|Ga0307474_10955950	Not Available	678	Open in IMG/M
3300031720\|Ga0307469_10991641	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300031754\|Ga0307475_10360648	Not Available	1168	Open in IMG/M
3300031820\|Ga0307473_10734603	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300031938\|Ga0308175_101329386	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300031938\|Ga0308175_101484126	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300031962\|Ga0307479_10494224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1207	Open in IMG/M
3300031962\|Ga0307479_10877100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300031996\|Ga0308176_12390547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	564	Open in IMG/M
3300032205\|Ga0307472_100799784	Not Available	861	Open in IMG/M
3300032205\|Ga0307472_102531955	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	522	Open in IMG/M
3300032783\|Ga0335079_10443771	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1392	Open in IMG/M
3300032805\|Ga0335078_10092826	All Organisms → cellular organisms → Bacteria → Acidobacteria	4374	Open in IMG/M
3300032893\|Ga0335069_10268259	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300032955\|Ga0335076_11433282	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	577	Open in IMG/M
3300033134\|Ga0335073_10900320	Not Available	932	Open in IMG/M
3300033158\|Ga0335077_11362381	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300033887\|Ga0334790_218268	Not Available	540	Open in IMG/M
3300034091\|Ga0326724_0141985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1502	Open in IMG/M
3300034125\|Ga0370484_0008123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2184	Open in IMG/M
3300034125\|Ga0370484_0115511	Not Available	707	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.67%
Host-Associated	Host-Associated	11.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.33%
Aquatic	Environmental → Aquatic	15.33%
Plants	Host-Associated → Plants	11.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.33%
Freshwater	Environmental → Aquatic → Freshwater	12.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.67%
Sediment	Environmental → Aquatic → Sediment	3.33%
Peat	Environmental → Terrestrial → Peat	2.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.67%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.33%
Roots	Host-Associated → Plants → Roots	1.33%
Peat Moss	Host-Associated → Plants → Peat Moss	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.00%
Loam	Environmental → Terrestrial → Soil → Loam	12.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.00%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.33%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.33%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.00%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.33%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.67%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.00%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.33%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.67%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.33%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.33%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.33%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.33%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.67%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.67%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.67%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.67%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.67%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.67%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.67%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.67%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.67%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25617J43924_102007032	3300002914	Grasslands Soil	IDGAVTSNMAIVPTTNGSVSAFAPNPTHLVLDIFGYFAP*
Ga0062593_1024439202	3300004114	Soil	QGQPQPQVATLNAVDAAVTSNLAIVPTANGNISAFVSNATQLVLDIFGYFAP*
Ga0062595_1000846523	3300004479	Soil	AIDGAITSNLAIVPAANGSISIFGSNPTHVVMDISGYFVAP*
Ga0062595_1014811262	3300004479	Soil	MWPQGQTQPLAATLNAYDGAITNNMAIVPSTSGAVSVSPLAPTHLVLDIFGYFAP*
Ga0062595_1017019201	3300004479	Soil	TLNAIDGAITSNLAIVPAANGSISIFGSNPTHVVMDISGYFVP*
Ga0062595_1023606641	3300004479	Soil	PQAQTQPLAATLNAYDGAITNNMAIVPTTTGSISVYPSAPTHLVLDIVGYFAP*
Ga0070682_1020459832	3300005337	Corn Rhizosphere	LSLWGDGGDPRPNASVLNAPDGVVTSNMALVPTTNGSVDAFASDSTHLILDLSGYFAP*
Ga0070709_104573762	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRPLAATLNAYDGAVTNNMAIVPTTTGSVSVFPSAATHLVLDLFGYFAP*
Ga0070709_108620081	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	PTVATLNAVDGALTSNLAIVPGTNGSISVFPSNPTHLVLDLFGYFAP*
Ga0070714_1015061032	3300005435	Agricultural Soil	TLWPQGQTQPNVATLNAVDAAVTSNLAIVPTVNGTVSAFASNPSHLVLDIFGYFGQ*
Ga0070714_1016710441	3300005435	Agricultural Soil	VSTLNAGDGFVTSNLAIVPTTNGLISSFASDPVHLVLDLSGYFAP*
Ga0070713_1023683301	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	STLNAIDGAVTSNMAIVPTNNGSIDVFVSNPTHVVLDIFGYFAP*
Ga0070710_108634252	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	STLNASDGFVTSNLAIVPTTNGLISSFASNPVHLILDLSGYFAP*
Ga0070711_1006668271	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MWPQGQMRPLAATLNAYDGAVTNNMAIVPTTTGSVCVFPSAATHLVPDLFGYFAP*
Ga0070699_1008961401	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LNAGDGAITSNLAIVPAANGSISIFGSNPTHVVMDISGYFVAP*
Ga0070738_100062511	3300005531	Surface Soil	VSSNMAIVPTTNANISAYASDPTFLILDLLGYFAP*
Ga0070733_100485443	3300005541	Surface Soil	ATLNASDGAVTNNMAIIPTTNGSISAFATDPTHLVLDIFAYFAP*
Ga0070733_108432561	3300005541	Surface Soil	PLAATLNDYDGTVTNNMAIVPTTTGSISIFPSNPTHLVLDIFGYFAP*
Ga0070733_109641942	3300005541	Surface Soil	QPLAATLNAYDGAVTNNMAIVPTTTGSISVFPSNPTHLVLDIFGYFGP*
Ga0070732_104108801	3300005542	Surface Soil	APGTSTLNSFDGAVTSNMAIVSTNNGSVNAFASAPTQLVLDIFGYFAP*
Ga0070732_109588221	3300005542	Surface Soil	PPGPFGFLTMWPEGEPQPPTATLNALDGAITSKMAIVPTKNGSITAFASNPTYLILDIFGFYAP*
Ga0068856_1015905301	3300005614	Corn Rhizosphere	NASVLNAPDGVVTSNMAVVPTTNGSVSAFASDSTHLILDLSGYFAP*
Ga0066788_100569842	3300005944	Soil	MRWTGAITSNLAIVPTANGSISVFPSNPTHLVVDISGYFGQ*
Ga0097691_11475293	3300006055	Arctic Peat Soil	AITSNLALVPTANGSISAFASDLAHLIVDISGYFGQ*
Ga0075017_1014641972	3300006059	Watersheds	LNAIDGAVTSNMAIVPAQSGAISVFALDPTHLVLDIFGYFAP*
Ga0075030_1016038051	3300006162	Watersheds	RPVVATLNAVDGAITSNMAIVPTTNGSISAFASNPTHLVMDISGYFGQ*
Ga0075030_1016558921	3300006162	Watersheds	TLNAMDGAITSNMAIVPATNGTISAFPSNPTHLILDILGYFGQ*
Ga0070716_1009342862	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	NAGDGAVTSNMAIVPTTNGSISAFVPDLSHLVLDISGFFAP*
Ga0070716_1012149402	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	ATLNDTDGAVTNNMAIVPTTTGSVSVFPLFPTHLVLDIFSYFAP*
Ga0068871_1009541572	3300006358	Miscanthus Rhizosphere	QGQSQPLAATLNAYDGAITNNMAIVPTTTGSISVFPVNPTHLVLDIFGFFAP*
Ga0066659_101557221	3300006797	Soil	LVSTLNAGDGAVTSNLAIVPTTNGSVSAFVSQPSHLVLDISGFFAP*
Ga0079220_108611281	3300006806	Agricultural Soil	QPIASILNSIDSAVTSNMAIVPTSNGSVKAFVSNPADLVLDIFGYFAP*
Ga0099794_103000051	3300007265	Vadose Zone Soil	GQPQPPTATLNAGDGAVTSNLAIIPTVNGSVSAFALSPTHLVLDVFGYFAP*
Ga0099828_113302642	3300009089	Vadose Zone Soil	AVDGAITSNLAIVPTTNGSIAVFPSAPTHLVLDLFGYFAP*
Ga0099827_100037477	3300009090	Vadose Zone Soil	AVTSNMAIVPTTNGSVSAFAPNPTHLVLDIFGYFAP*
Ga0099827_100153652	3300009090	Vadose Zone Soil	MWPQGQTLPLAATLNAYDGAITNNMAIVPTTTGSVSVFPSAPTHLVLDIFAYFAP*
Ga0066709_1000248794	3300009137	Grasslands Soil	LWPQGQAQPLVATLNAIDGAITSNMAITPTQNGSISAYALNPAHLVLDIFGYFAP*
Ga0066709_1016835482	3300009137	Grasslands Soil	LNAIDGAVTSNMAIVPTANGSISIFSSQPTHLVIDISGFFEP*
Ga0105243_129774971	3300009148	Miscanthus Rhizosphere	QPQPVVSTLNAIDGAITSNLAITPIQNGSISAFALNPTHLILDIFGYFAP*
Ga0105248_130358641	3300009177	Switchgrass Rhizosphere	ITSNMAIVPVGSGSISVFGSNPTHLILDVSGYLAP*
Ga0116230_111122882	3300009510	Host-Associated	DGAVTSNTAIVGTTNGSIGIFAANPTVLTLDVYGYFAP*
Ga0116221_12080551	3300009523	Peatlands Soil	AASLNALDGAITSNLAIVPTTNGSISVFPFNPTHLVLDLFGYFAP*
Ga0105238_126862421	3300009551	Corn Rhizosphere	VSTLNDLDGSITNNLAIVPTNNGAISVFATDSTHLVMDVFGYFAP*
Ga0116121_10852632	3300009644	Peatland	SSLDQTVTSNLAIVPTTNGSISTYAANPTQLVLDIFGYFGP*
Ga0126373_130736661	3300010048	Tropical Forest Soil	TMWPQGQPQPLAATLNAFDGAITNNMAIVPTTNGSVSIFPTGPTHLVLDAFGFFAP*
Ga0126377_132123562	3300010362	Tropical Forest Soil	TLNAVDGVVTSNMAIVPTTNLSVSAFGPNPTHLVLDISGYFAP*
Ga0134128_108914961	3300010373	Terrestrial Soil	TLHAIDGAITSNLAIVPAANGSISIFGSNPMHVVMDISGYFVAP*
Ga0134127_131312171	3300010399	Terrestrial Soil	TLNAIDGAITNNMAIVPTNNGSISVFPTAPTHLVLDVFGFFAP*
Ga0150983_143521261	3300011120	Forest Soil	QGQPLPLAATLNASDGAVTNNMAIIPTTNGSISAFATDPTHLVLDIFAYFAP*
Ga0150983_146577922	3300011120	Forest Soil	PQGQTRPLASTLNAQDGAITSNLAIVPTTNGSISAFATAPTHVVMDISGYFGQ*
Ga0150983_147875212	3300011120	Forest Soil	AVTSNMAIVSTTNGSVNAFGSNPTQLVLDIFGYFAP*
Ga0137392_108823451	3300011269	Vadose Zone Soil	LWPQGAVQPFVSTLNAVDGFVTSNMAIVLTTNGSVSAFATNSTHLVLDISGYFAP*
Ga0137391_110464841	3300011270	Vadose Zone Soil	AYDGAITNNMAIVPTTTGSISVFPSAPTHLVLDIFGYFAP*
Ga0137388_110174332	3300012189	Vadose Zone Soil	TMWPQGQTQPPTATLNAYDATITNNMAIVPTTTGSISVFPSALTQLVLDVFGYFAP*
Ga0137377_114228562	3300012211	Vadose Zone Soil	TLNAWDATVTSNMAIVPTTNGSVSAFANDSTHLVLDISAYFAP*
Ga0150985_1128668311	3300012212	Avena Fatua Rhizosphere	LNSLDAAVTSNLAIVPTYNGSASAFASNTTHLALDLNGFFAP*
Ga0137360_107945362	3300012361	Vadose Zone Soil	LWPNGTPQPGTSTLNAFDGAVTSNMAIVATNNGSVNVFTSSPTQLVLDIFGYFAP*
Ga0137361_117122682	3300012362	Vadose Zone Soil	VPPAPLGFLTMWPQGQPQPPTATLNAGDGAVTSNLAIIATVNGSVSAFALNPTHLVLDVFGYFAP*
Ga0137390_107718111	3300012363	Vadose Zone Soil	QPLAATLNDTDGAVTNNMAIVPTTTGSVSVFPIAPTHLVLDIFAYFAP*
Ga0150984_1234560292	3300012469	Avena Fatua Rhizosphere	AGVATLNSLDAAVTSNMAIVPTYNGSASAFASNATQLVLDLNGFFAP*
Ga0137395_101865571	3300012917	Vadose Zone Soil	GQPQPPTATLNAGDGAVTSNMAIIPTVNGSVSAFALNLTHLVVDVFAYFAP*
Ga0137395_111220931	3300012917	Vadose Zone Soil	NAYDGAITNNMAIVPTTTGSISVFPSAPTHLVLDIFGYFAP*
Ga0137394_114155451	3300012922	Vadose Zone Soil	MWPQGQPLPLAATLNAGDGAVTSNLAIIPTTNGSVSAFALNPTHLVLDIFGYFAP*
Ga0137416_117078912	3300012927	Vadose Zone Soil	WPQGQPQPPTATLNAGDGAVTSNMAIIPTVNGSVSAFALSPTHLVLDVFGYFAP*
Ga0137416_118880521	3300012927	Vadose Zone Soil	PTATLNAGDGAVTSNVAIIPTVNGSVSAFALSSTHLVLDVFGYFAP*
Ga0126369_128541231	3300012971	Tropical Forest Soil	IDGAITSNLAIVPAANGSISIFGSNPTHVIMDISGYFVP*
Ga0164304_102940182	3300012986	Soil	QPQPPTATLNAGDGAVTSNLGIIPTANGSVSTYAISPTHLVLDIFGYFAP*
Ga0164305_116589001	3300012989	Soil	QGQMRPLAAGLNAYDGAVTNNMAIVPTTTGSVCVFPSAATHLVPDLFGYFAP*
Ga0164305_120891871	3300012989	Soil	GQTQPLAATLNAYDGAVTNNMAIVPTTTGSISVFPSAPTHLILDLFGYFAP*
Ga0157370_118066561	3300013104	Corn Rhizosphere	ITSNMAIVPATNGSISAFGTHPVDLILDMSGYFAP*
Ga0157369_103394844	3300013105	Corn Rhizosphere	QPNASALNAPDGTVTSNMAIVPTTDGSISAFASQSTHLILDIFGYFAP*
Ga0157378_102065461	3300013297	Miscanthus Rhizosphere	ATLNASDGAVTNNMAIIRTTNGAISAFATDLTHMVLDIFAYFAP*
Ga0157378_105558982	3300013297	Miscanthus Rhizosphere	GAVTSNLAIVPATNGVISVFASNPTHLIVDIAGYFGQ*
Ga0157372_119823591	3300013307	Corn Rhizosphere	LWPHGTGAQPNASALNAPDGTVTSNMAIVPTTDGSISAFASQSTHLILDIFGYFAP*
Ga0181518_103114781	3300014156	Bog	TVTSNLAIVPTTNESISTFASNTTQLVLDLFAYFALP*
Ga0181538_103393491	3300014162	Bog	LDQTVTSNLAIVPTTNLSISTFAANPSQLILDIFGFFAP*
Ga0181526_101621811	3300014200	Bog	LNALDGAITSNMALVPTTNGSISSYVYVPSTTYLILDIFGYFAP*
Ga0181537_103962721	3300014201	Bog	PLAATLSATDQTVTSNMAIVPASNGAISAFASNPTQLILDMFGFFAP*
Ga0182014_100835381	3300014491	Bog	QTMPVVSTLNALDGAVTSNLAIVPTASGSISIFPSNPTHVVMDISGYFGP*
Ga0182014_101345181	3300014491	Bog	QTMPVVSTLNALDGAVTSNLAIVPTASGSISIFPSNPTHVVLDISGYFAP*
Ga0182014_103731611	3300014491	Bog	GQTMPVASTLNALDGSVTSNLAIVPTLDGSISVFPSNPTHVVMDISAYFGP*
Ga0182021_109424742	3300014502	Fen	ITSNLAIVPTTNGSISAFPSNPTHLILDISGYFGQ*
Ga0181519_101976162	3300014658	Bog	PQPVVSTLNAIDGDITSNLAIVPTNNTEISAFADSSTYLVLDLFGYFAP*
Ga0182030_112145471	3300014838	Bog	PLAATLNAVDGAITSNMAIVPTTNGSITAYPSNPTYLILDIFGFFAP*
Ga0182027_100484385	3300014839	Fen	MPVVSTLNALDGAVTSNLAIVPTASGSISVFPSNPTHVVMDISAYFGP*
Ga0167668_10511171	3300015193	Glacier Forefield Soil	ATLNAGDGAVTSNMAIIPTVNGSVSAFALSPTHLVLDVFGYFAP*
Ga0167668_11029732	3300015193	Glacier Forefield Soil	PWYDGAVTNNMAVVPTTTGSVSVFPLAPTQLVLDIFGYFAP*
Ga0137409_111046721	3300015245	Vadose Zone Soil	AMLNAGDGAVTSNLAIIPTVNGSVSAFALNPTHLVLDVFGYFAP*
Ga0187782_116475061	3300017975	Tropical Peatland	GASMPVVSTLNALDGAITSDMAIVPTTNGEISAYASNQTQLVLDLFGYFAP
Ga0181520_104361262	3300017988	Bog	GAITSNMPLVPTANGSISSYVYVPTTTYLILDLFGYFAP
Ga0181520_104463813	3300017988	Bog	STLNALDGAITSNMALVPTTNGSISSYVYVPSTTYLILDLFGYLAP
Ga0187863_100392991	3300018034	Peatland	PLVATLSALDATVTSNLAIVPTTNGSISTFASNPTQLILDIFGFFAP
Ga0187863_103120962	3300018034	Peatland	VSTLNALDGSITSNLAIVPTSNTQISAFADGSTYLVLDIFGYFAP
Ga0187883_100306002	3300018037	Peatland	LWPQGIVQPVVSTLNAENGDITSNMAIVPTSNTQISAFASNTTYLVLDLFGYFAP
Ga0187855_103119602	3300018038	Peatland	TQPVVSTLNALDGAITSNMALVPTTNGSISSYVYVPSTTYLILDVFGYFAP
Ga0187855_103382952	3300018038	Peatland	ATLSATDQTVTSNMAIVPASNGAISAFASNPTQLILDMFGFFAP
Ga0187887_102731882	3300018043	Peatland	QPLAATLSALDQTVTSNLAIVPTTNGSISTYAANPTQLVLDIFGYFGP
Ga0187890_102963471	3300018044	Peatland	GITAANMAIVPTDNGSISAYVTNPTFLVLDIFGYFAP
Ga0187890_103892422	3300018044	Peatland	ATDQTVTSNMAIVPASNGAISAFASNPTQLILDMFGFFAP
Ga0187890_107234931	3300018044	Peatland	PLAATLSALDQTVTSNLAIVPTTNGSVSTYAANPTQLVLDLFGYFAP
Ga0137408_11906551	3300019789	Vadose Zone Soil	LFRRLNAIDGSITSNLAIVPTNNGQISSFASNPVQLILDISGYFAP
Ga0210388_101322071	3300021181	Soil	VTSNLAIVPGAGGSISVFPFNPTQLVLDLFGYFAP
Ga0213881_100806261	3300021374	Exposed Rock	LNALDAAITSNLALVPTASGLLNAFASNPTHLILDISGFFAP
Ga0213881_101655831	3300021374	Exposed Rock	NAVDGAITSNMALVPTNNGSISAFASNPTNLVLDIFGYFGP
Ga0213874_103040172	3300021377	Plant Roots	NASALNAPDGAVTSNLAIVPATDGSVNAFASQSTHLILDISGYFAP
Ga0210383_113466421	3300021407	Soil	ITSNMAIVPTTTGSISVFGSSPTYLILDNFGYIAP
Ga0210394_105552241	3300021420	Soil	GAITNNMAIVPTKNGSISVFPSGPTQLVLDLFGYFAP
Ga0210409_101156921	3300021559	Soil	DGAVTNNMAVVPATTGSVSVFPSAPTHLVLDIFGYFAP
Ga0242665_103467141	3300022724	Soil	STLNAGDSAITSNMAIVSTTNGSISAFVPDPSHLVLDLSGFFGP
Ga0208078_10236953	3300025544	Arctic Peat Soil	QVSTLNASDGAVTSNMAIVPTNNGSINVFVSNQTHVVLDIFGYFAP
Ga0207927_11172711	3300025579	Arctic Peat Soil	GVSTLNALDASVTSNLAIVPTGNGSISAFASDPTHLILDISGYFGQ
Ga0207926_10978171	3300025619	Arctic Peat Soil	LWQQGQTRPVVSTLNALDGAITSNLAIVPTGNGSISAFGSDMTHLILDISGYFGQ
Ga0207692_104406492	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	NASDGAVTNNMAIIRTTNGAISAFATDLTHMVLDIFAYFAP
Ga0207699_107487681	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	QPTVATLNAVDGALTSNLAIVPGTNGSISVFPSNPTHLVLDLFGYFAP
Ga0207699_112645582	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	PQPRTATLNAGDGAVTSNLAIIPTANGSVSTYAISPTHLVLDIFGYFAP
Ga0207663_101858324	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PAVSTLNALDGAVTSNLAIVPTYNRSISAFPTNPVRLVLDMFGYFAP
Ga0207700_108230802	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	QPTVATLNAVDGALTSNLAIVPSTNGSISVFPSNPTHLVLDLFGYFAP
Ga0207667_116638341	3300025949	Corn Rhizosphere	VSTLNALDGAITSNLAIVPAAVGGSISAYASATTHLILDIFGYMAP
Ga0207702_117636701	3300026078	Corn Rhizosphere	NAHDGAVTSNMAIVPTTNGLISAFGSNPVHLVLDISGYFAP
Ga0209139_100070072	3300027795	Bog Forest Soil	VSTLNAPDGTITSNRAIVPTANGSINAYATNSTNLILDPSCHFAP
Ga0209167_100071075	3300027867	Surface Soil	WPQGPARPLAATLNASDGAVTNNMAIIPTTNGSISAFATDPTHLVLDIFAYFAP
Ga0209583_101725711	3300027910	Watersheds	GQPLPLASTLNAGDGAVTSNLAIIPTTNGSVSAFALNPTHLVLDIFAYFAP
Ga0209698_109043922	3300027911	Watersheds	NSEGSVASNMAIVPTINGFIDAYASQPTYLIIDVYGYFAP
Ga0209062_10139995	3300027965	Surface Soil	AVSSNMAIVPTTNANISAYASDPTFLILDLLGYFAP
Ga0222749_104497481	3300029636	Soil	QGQSQPLVATLNAYDGAVTNNMAIVPATTGSISVFPSAPTHLVLDIFGYFAP
Ga0311352_104279731	3300029944	Palsa	VTSNMAIVPTTNTDISAYATNDTYLVLDMFGYFAP
Ga0265328_103506772	3300031239	Rhizosphere	WPQGIPQPVVSTLNALDGAITGNMAVVPSNNGSISIFAPQPTHLVLDLFGFFGQ
Ga0170820_163411842	3300031446	Forest Soil	TLNAIDGAITSNLAIVPAANGSISIFGSNPTHVVMYISGYFLAP
Ga0302320_117407472	3300031524	Bog	GQTRPVVSTLNALDGAITSNLAIVPTSNGSISVFPSNPTHLVVDIYGYFAQ
Ga0307474_109559502	3300031718	Hardwood Forest Soil	LAATLNALDGAITSNMAIVPTTTGSISVFGSSPTYLILDNFGYIAP
Ga0307469_109916413	3300031720	Hardwood Forest Soil	GFLTMWPQGQPQPLAATLNAGDGAVTSNLAIIPTNNGSVSAFAPSSTHLVLDVFAYFAP
Ga0307475_103606481	3300031754	Hardwood Forest Soil	PRPLAATLNASDGAITNNMAIIPSTNGSISAFTTDPTHLILDIFAFFAP
Ga0307473_107346031	3300031820	Hardwood Forest Soil	TLNSYDGAVTNNMTIVPTTTGSVSVFPFNPTHLVLDIFGYFAP
Ga0308175_1013293862	3300031938	Soil	QAQAQPGVATVNALDRAVTSNMAIVPATSGSISAFASNLTHLILDIFGYFAP
Ga0308175_1014841263	3300031938	Soil	QGQPQPTVATLNSLDGAVTSNLAIVPTSNGSTSAFATNVTHLVFDLNGFFAP
Ga0307479_104942241	3300031962	Hardwood Forest Soil	FGYLTLWAQGQPQPLVATLNAIDGAITSNMAIVPTQNGSISVFALNPAHLVLDIFGYFAP
Ga0307479_108771001	3300031962	Hardwood Forest Soil	PQGALGYLTLWAQGAAQPFVSTLNAWDATVTSNMAIVPTTNGSVSAFATDSTHLVLDISAYFAP
Ga0308176_123905471	3300031996	Soil	LWPQGQVQPGVATLNALDGVVTSNLAIVPTANGSVSSYATNPSHLIVDLFGYFAP
Ga0307472_1007997842	3300032205	Hardwood Forest Soil	LLPLAATLNASDGAVTNNMAIIRTTNGAISAFATDLTHLVLDIFAYFAP
Ga0307472_1025319551	3300032205	Hardwood Forest Soil	ITNNMAIVPTTNGSISVFPSAPTHLVLDIFGYFAP
Ga0335079_104437711	3300032783	Soil	AATLNALDGAITSNMAIVPTTNGSISVFGSNPTYLILDNFGYFAP
Ga0335078_100928262	3300032805	Soil	VAAGHVGPMASTLNAADGAITGNMVIVPTANGSISAYASNQTQLVLDLFGYFAP
Ga0335069_102682591	3300032893	Soil	VVATLNAVDGAVTSNLAIVPTNNGSISAFLSNPAYLVLDIFGYFAQ
Ga0335076_114332822	3300032955	Soil	ITSNMAIVPTTNGSISVFGSNPTYLILDNFGYFAP
Ga0335073_109003203	3300033134	Soil	EPVVSTLNAYDGAVTSNLAIVPTINGEIDSFASNWTNLILDVFGYFAP
Ga0335077_113623812	3300033158	Soil	MASTLNAADGAITGNMVIVPTANGSISAYASNQTQLVLDLFGYFAP
Ga0334790_218268_402_539	3300033887	Soil	ATLSALDATVTSNLADVPTTNGSISTFASNTTQLVLDLFAYFSLP
Ga0326724_0141985_1369_1500	3300034091	Peat Soil	TLNAVDGAITNNMAIVPTANGSISAYASDPTHLILDIFGYFAP
Ga0370484_0008123_1_123	3300034125	Untreated Peat Soil	ALDGAITSNLAIVPTTNGWIGAFASDPTHMVVDISGYFGQ
Ga0370484_0115511_13_141	3300034125	Untreated Peat Soil	LNALDGAITSNLAIVPTTNGWISSFASDMAHLIVDISGYFGQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047262

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences