NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F047184

Metagenome / Metatranscriptome Family F047184

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F047184
Family Type Metagenome / Metatranscriptome
Number of Sequences 150
Average Sequence Length 60 residues
Representative Sequence MQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLVDMSGEVWTMHREG
Number of Associated Samples 113
Number of Associated Scaffolds 150

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 49.33 %
% of genes near scaffold ends (potentially truncated) 50.67 %
% of genes from short scaffolds (< 2000 bps) 86.67 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (66.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(19.333 % of family members)
Environment Ontology (ENVO) Unclassified
(29.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(62.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 21.69%    β-sheet: 21.69%    Coil/Unstructured: 56.63%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.108.1.0: automated matchesd2vi7a_2vi70.76958
d.108.1.0: automated matchesd6th0a_6th00.74073
d.108.1.1: N-acetyl transferase, NATd1wwza11wwz0.73817
d.108.1.0: automated matchesd5icva_5icv0.72961
d.108.1.0: automated matchesd6e1xa_6e1x0.72819


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 150 Family Scaffolds
PF09397FtsK_gamma 46.00
PF07228SpoIIE 2.67
PF13358DDE_3 2.67
PF00106adh_short 1.33
PF05016ParE_toxin 1.33
PF13602ADH_zinc_N_2 1.33
PF08327AHSA1 1.33
PF13491FtsK_4TM 1.33
PF11154DUF2934 0.67
PF02628COX15-CtaA 0.67
PF028262-Hacid_dh_C 0.67
PF00211Guanylate_cyc 0.67
PF03176MMPL 0.67
PF13560HTH_31 0.67
PF07883Cupin_2 0.67
PF07517SecA_DEAD 0.67
PF14684Tricorn_C1 0.67
PF05025RbsD_FucU 0.67
PF03466LysR_substrate 0.67
PF00873ACR_tran 0.67
PF08770SoxZ 0.67
PF00909Ammonium_transp 0.67
PF03572Peptidase_S41 0.67
PF01656CbiA 0.67

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 150 Family Scaffolds
COG0004Ammonia channel protein AmtBInorganic ion transport and metabolism [P] 0.67
COG0653Preprotein translocase subunit SecA (ATPase, RNA helicase)Intracellular trafficking, secretion, and vesicular transport [U] 0.67
COG0793C-terminal processing protease CtpA/Prc, contains a PDZ domainPosttranslational modification, protein turnover, chaperones [O] 0.67
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 0.67
COG1612Heme A synthaseCoenzyme transport and metabolism [H] 0.67
COG1869D-ribose pyranose/furanose isomerase RbsDCarbohydrate transport and metabolism [G] 0.67
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.67
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 0.67
COG4154L-fucose mutarotase/ribose pyranase, RbsD/FucU familyCarbohydrate transport and metabolism [G] 0.67


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A66.00 %
All OrganismsrootAll Organisms34.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10775943Not Available550Open in IMG/M
3300002245|JGIcombinedJ26739_100225042Not Available1768Open in IMG/M
3300002245|JGIcombinedJ26739_100793172Not Available827Open in IMG/M
3300003219|JGI26341J46601_10156304Not Available635Open in IMG/M
3300004080|Ga0062385_10043276Not Available1898Open in IMG/M
3300004082|Ga0062384_100851121Not Available641Open in IMG/M
3300004082|Ga0062384_101114874All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales570Open in IMG/M
3300004091|Ga0062387_100544591Not Available820Open in IMG/M
3300004091|Ga0062387_100802078All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales702Open in IMG/M
3300004091|Ga0062387_101195668Not Available595Open in IMG/M
3300004092|Ga0062389_100567291All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium1294Open in IMG/M
3300004092|Ga0062389_100761874All Organisms → cellular organisms → Bacteria1145Open in IMG/M
3300004092|Ga0062389_102045879Not Available749Open in IMG/M
3300004092|Ga0062389_102486582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales687Open in IMG/M
3300004092|Ga0062389_102720195Not Available660Open in IMG/M
3300004092|Ga0062389_102989473Not Available632Open in IMG/M
3300004152|Ga0062386_100273604All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1342Open in IMG/M
3300004152|Ga0062386_101397411Not Available583Open in IMG/M
3300004152|Ga0062386_101552323Not Available552Open in IMG/M
3300004152|Ga0062386_101855692All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales503Open in IMG/M
3300005439|Ga0070711_101113803Not Available680Open in IMG/M
3300005533|Ga0070734_10027993All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3603Open in IMG/M
3300005533|Ga0070734_10069916All Organisms → cellular organisms → Bacteria → Proteobacteria2088Open in IMG/M
3300005533|Ga0070734_10120786All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1530Open in IMG/M
3300005534|Ga0070735_10064878All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium2368Open in IMG/M
3300005591|Ga0070761_10873261Not Available568Open in IMG/M
3300005944|Ga0066788_10178241Not Available548Open in IMG/M
3300006176|Ga0070765_101759375Not Available582Open in IMG/M
3300009093|Ga0105240_11200592Not Available803Open in IMG/M
3300009633|Ga0116129_1008271All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4221Open in IMG/M
3300009633|Ga0116129_1102226Not Available830Open in IMG/M
3300009784|Ga0123357_10862292Not Available595Open in IMG/M
3300009826|Ga0123355_10925793All Organisms → cellular organisms → Bacteria941Open in IMG/M
3300010049|Ga0123356_11986003Not Available725Open in IMG/M
3300010339|Ga0074046_10010822All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales6792Open in IMG/M
3300010339|Ga0074046_10265818Not Available1061Open in IMG/M
3300010341|Ga0074045_10116951All Organisms → cellular organisms → Bacteria → Proteobacteria1832Open in IMG/M
3300010371|Ga0134125_12662847Not Available544Open in IMG/M
3300010375|Ga0105239_12484918Not Available604Open in IMG/M
3300010376|Ga0126381_102962634Not Available675Open in IMG/M
3300010379|Ga0136449_103740065All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales574Open in IMG/M
3300010864|Ga0126357_1069402Not Available612Open in IMG/M
3300010864|Ga0126357_1126354All Organisms → cellular organisms → Bacteria1110Open in IMG/M
3300010865|Ga0126346_1253350Not Available607Open in IMG/M
3300010869|Ga0126359_1783332Not Available829Open in IMG/M
3300011120|Ga0150983_10143818Not Available738Open in IMG/M
3300011120|Ga0150983_12011148Not Available605Open in IMG/M
3300011404|Ga0153951_1051133Not Available725Open in IMG/M
3300012177|Ga0153943_1021227All Organisms → cellular organisms → Bacteria → Proteobacteria1473Open in IMG/M
3300012677|Ga0153928_1007390All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3455Open in IMG/M
3300014168|Ga0181534_10271226Not Available906Open in IMG/M
3300014199|Ga0181535_10488893Not Available713Open in IMG/M
3300014200|Ga0181526_10058083Not Available2467Open in IMG/M
3300016294|Ga0182041_11445379Not Available632Open in IMG/M
3300017924|Ga0187820_1154402Not Available693Open in IMG/M
3300017946|Ga0187879_10843514Not Available512Open in IMG/M
3300017966|Ga0187776_10475807All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300017972|Ga0187781_11285942Not Available539Open in IMG/M
3300017994|Ga0187822_10375562Not Available519Open in IMG/M
3300018009|Ga0187884_10207993Not Available805Open in IMG/M
3300018037|Ga0187883_10631761Not Available557Open in IMG/M
3300018038|Ga0187855_10352103Not Available860Open in IMG/M
3300018046|Ga0187851_10663163Not Available588Open in IMG/M
3300018060|Ga0187765_10372147All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium875Open in IMG/M
3300018086|Ga0187769_10762829Not Available731Open in IMG/M
3300019785|Ga0182022_1205351All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1309Open in IMG/M
3300020581|Ga0210399_10222516All Organisms → cellular organisms → Bacteria1572Open in IMG/M
3300021171|Ga0210405_11342104Not Available523Open in IMG/M
3300021406|Ga0210386_10231256All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin1001573Open in IMG/M
3300021406|Ga0210386_11573634Not Available546Open in IMG/M
3300021407|Ga0210383_10542904All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1003Open in IMG/M
3300021433|Ga0210391_11273989Not Available568Open in IMG/M
3300021439|Ga0213879_10268038Not Available519Open in IMG/M
3300021474|Ga0210390_11145302Not Available630Open in IMG/M
3300021475|Ga0210392_11468460Not Available510Open in IMG/M
3300021479|Ga0210410_10150591Not Available2073Open in IMG/M
3300021559|Ga0210409_10497859All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin1001082Open in IMG/M
3300022508|Ga0222728_1130122Not Available500Open in IMG/M
3300022525|Ga0242656_1127838Not Available520Open in IMG/M
3300022527|Ga0242664_1120835Not Available556Open in IMG/M
3300022527|Ga0242664_1134477Not Available535Open in IMG/M
3300022530|Ga0242658_1012485All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1404Open in IMG/M
3300022530|Ga0242658_1150765Not Available599Open in IMG/M
3300022531|Ga0242660_1232465Not Available519Open in IMG/M
3300022716|Ga0242673_1077316Not Available608Open in IMG/M
3300022721|Ga0242666_1098383Not Available674Open in IMG/M
3300022726|Ga0242654_10268979All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria617Open in IMG/M
3300022726|Ga0242654_10421580Not Available516Open in IMG/M
3300025916|Ga0207663_11437426All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans555Open in IMG/M
3300027496|Ga0208987_1056180Not Available709Open in IMG/M
3300027567|Ga0209115_1137382Not Available550Open in IMG/M
3300027692|Ga0209530_1068650Not Available1023Open in IMG/M
3300027729|Ga0209248_10166440Not Available655Open in IMG/M
3300027768|Ga0209772_10016997All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium2040Open in IMG/M
3300027812|Ga0209656_10401535Not Available614Open in IMG/M
3300027824|Ga0209040_10367552Not Available677Open in IMG/M
3300027825|Ga0209039_10072867All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1515Open in IMG/M
3300027825|Ga0209039_10349452Not Available574Open in IMG/M
3300027825|Ga0209039_10429842Not Available501Open in IMG/M
3300027826|Ga0209060_10020609All Organisms → cellular organisms → Bacteria3468Open in IMG/M
3300027826|Ga0209060_10331767All Organisms → cellular organisms → Bacteria → Proteobacteria693Open in IMG/M
3300027889|Ga0209380_10431042Not Available772Open in IMG/M
3300027898|Ga0209067_10970299Not Available501Open in IMG/M
3300027908|Ga0209006_10122102All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2300Open in IMG/M
3300027908|Ga0209006_10227188All Organisms → cellular organisms → Bacteria1612Open in IMG/M
3300027908|Ga0209006_11427326Not Available528Open in IMG/M
3300027986|Ga0209168_10135566All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300029701|Ga0222748_1140026Not Available502Open in IMG/M
3300029882|Ga0311368_10399617Not Available1012Open in IMG/M
3300029944|Ga0311352_11447194Not Available515Open in IMG/M
3300030730|Ga0307482_1076827All Organisms → cellular organisms → Bacteria871Open in IMG/M
3300030730|Ga0307482_1175041Not Available639Open in IMG/M
3300030730|Ga0307482_1214476Not Available591Open in IMG/M
3300030839|Ga0073999_10953444Not Available615Open in IMG/M
3300030878|Ga0265770_1098900All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales591Open in IMG/M
3300031018|Ga0265773_1008791Not Available819Open in IMG/M
3300031022|Ga0138301_1414797All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales731Open in IMG/M
3300031022|Ga0138301_1429591Not Available510Open in IMG/M
3300031234|Ga0302325_10834858All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans1293Open in IMG/M
3300031469|Ga0170819_16713979Not Available799Open in IMG/M
3300031474|Ga0170818_101578512Not Available617Open in IMG/M
3300031525|Ga0302326_11869185Not Available783Open in IMG/M
3300031525|Ga0302326_12700155Not Available617Open in IMG/M
3300031708|Ga0310686_101899000All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria8402Open in IMG/M
3300031708|Ga0310686_113019122Not Available617Open in IMG/M
3300031708|Ga0310686_114052479Not Available4911Open in IMG/M
3300031715|Ga0307476_10991992Not Available619Open in IMG/M
3300031779|Ga0318566_10325922All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300031910|Ga0306923_12151840Not Available561Open in IMG/M
3300031941|Ga0310912_10568966Not Available882Open in IMG/M
3300032008|Ga0318562_10223586All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium1092Open in IMG/M
3300032261|Ga0306920_103055489Not Available630Open in IMG/M
3300032261|Ga0306920_104151593Not Available523Open in IMG/M
3300032515|Ga0348332_11268207Not Available554Open in IMG/M
3300032805|Ga0335078_10552336All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1466Open in IMG/M
3300032892|Ga0335081_10929790Not Available1022Open in IMG/M
3300032893|Ga0335069_10183890Not Available2561Open in IMG/M
3300032895|Ga0335074_11075150Not Available697Open in IMG/M
3300032895|Ga0335074_11296011Not Available602Open in IMG/M
3300032896|Ga0335075_11010197Not Available745Open in IMG/M
3300032897|Ga0335071_10969613All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria797Open in IMG/M
3300032898|Ga0335072_10059176All Organisms → cellular organisms → Bacteria → Proteobacteria5098Open in IMG/M
3300032898|Ga0335072_10884084Not Available839Open in IMG/M
3300032955|Ga0335076_10026269All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans5848Open in IMG/M
3300032955|Ga0335076_10033873All Organisms → cellular organisms → Bacteria5120Open in IMG/M
3300033134|Ga0335073_10212050All Organisms → cellular organisms → Bacteria → Proteobacteria2393Open in IMG/M
3300033290|Ga0318519_11082883Not Available500Open in IMG/M
3300033405|Ga0326727_10115364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3410Open in IMG/M
3300033755|Ga0371489_0003426All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales19004Open in IMG/M
3300034163|Ga0370515_0358707Not Available615Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil19.33%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil16.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil8.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.33%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.67%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland3.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.33%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa3.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.67%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.67%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.67%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil2.67%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog2.00%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.00%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut2.00%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens2.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.33%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.33%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.33%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.33%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.33%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.33%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.67%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.67%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.67%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.67%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.67%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.67%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.67%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.67%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.67%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003219Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005944Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009633Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10EnvironmentalOpen in IMG/M
3300009784Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4Host-AssociatedOpen in IMG/M
3300009826Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1Host-AssociatedOpen in IMG/M
3300010049Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3Host-AssociatedOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010864Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010865Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010869Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011404Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaGHost-AssociatedOpen in IMG/M
3300012177Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaGHost-AssociatedOpen in IMG/M
3300012677Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaGHost-AssociatedOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014199Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300019785Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021439Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03EnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022527Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022530Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022716Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027496Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027567Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027692Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027729Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027768Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030839Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFB (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030878Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031018Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031022Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033755Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fractionEnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1077594313300001593Forest SoilRHQIKDAPPNTWATVHRSDVVTMSELARRGFHLIDMSGEVWTMHREG*
JGIcombinedJ26739_10022504223300002245Forest SoilGNRHQIKDAPPDTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG*
JGIcombinedJ26739_10079317223300002245Forest SoilISPAPGQGRTRSAATGTETPMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG*
JGI26341J46601_1015630413300003219Bog Forest SoilMQHFHVGNIDQIKDAPPNSWATVHSYDRVTFSELVRRGFHLVDMRGELWTMLRAG*
Ga0062385_1004327623300004080Bog Forest SoilMRHFHAGNLHQIKDAPPNTWATVRASDVVTISELARRGFHLVDMTGELWTMRRGD*
Ga0062384_10085112123300004082Bog Forest SoilMQHFELRNLHKIRDMEPHTFATVHSRDAVTFSELARCGFHLVDMSGEVWTMLRPGQRPAPRSKD*
Ga0062384_10111487413300004082Bog Forest SoilMQYFHAGNLHQIKDAPPGAWATVRASDVVTISELARRGFHLVDMSGEVWTMLRGGLEGFSPRSGF*
Ga0062387_10054459123300004091Bog Forest SoilMQHFQHFHAGNLHQIKDAPPGAWAKVHASDVVTISELARRGFHLVDMTGEVWTMHRAG*
Ga0062387_10080207823300004091Bog Forest SoilMQHFHAGNLHQIKDAPPGAWATVRASDVVTISELARRGFHLVDMSGELWTMHRAG*
Ga0062387_10119566813300004091Bog Forest SoilMRHFHAGNLHQIKDAPPNTWATVRASDVVTISELARRGFHLVDMTGELWTMRR
Ga0062389_10056729143300004092Bog Forest SoilMENPMQHFEMRNLHKIRDMEPHTFATVHSRDAVTFSELARCGFHLVDMSGEVWTMLRPGQRPAPRSKD*
Ga0062389_10076187413300004092Bog Forest SoilRNLHKIRDMEPHTFATVHSRDAVTFSELARCGFHLVDMSGEVWTMLRPGQRPAPRSKD*
Ga0062389_10204587913300004092Bog Forest SoilMQHFHSGNLHQIKDALPGAWATVSASDAVTISELARCGFHLVDMSGEVWTMLRGGLKQVA
Ga0062389_10248658213300004092Bog Forest SoilPMQHFHAGNLHQIKDAPPGAWATVRASDVVTISELARRGFHLVDMSGELWTMHRAG*
Ga0062389_10272019523300004092Bog Forest SoilMQHFNAGNLHQIKDAPPDTWATVYASDVVTISELARRGFHLVDMSGEIWTMHRAG*
Ga0062389_10298947333300004092Bog Forest SoilMQHFHAGNLHQIKDAPPGAWATVAASDVVTISELARRGFHLVDMTGAFWTMLRAS*
Ga0062386_10027360433300004152Bog Forest SoilMRHFHSGNLHQIKDAPPGAWATVRASDVVTISELARRGFHLVDMSGHVWTMLRAG*
Ga0062386_10139741113300004152Bog Forest SoilMHRFHKRNLDKIQDAPPNTWATVQCNDVVTFSELVRHGFHLVDMRVQVWTMRRAG*
Ga0062386_10155232313300004152Bog Forest SoilMQHFDQGNLDKIKDVPPNTWATVHCDDMVTFSELVRRGFHLVDMRGELWTMRRAG*
Ga0062386_10185569223300004152Bog Forest SoilMRHFHAGNLHQIKDAPPGAWATVNASDVVTISELARRGFHLVDMSGAVWTMLRGG*
Ga0070711_10111380313300005439Corn, Switchgrass And Miscanthus RhizosphereMQHFHAGNLDKIKDAPPNTWATVHRRDVVTLSELARRGFHLVDMSGEMWTMRRAG*
Ga0070734_1002799343300005533Surface SoilMQHFHAGNLHQIKDAPPGAWATVKANDAVTISELARRGFHLVDMSGDVWTMLRAG*
Ga0070734_1006991623300005533Surface SoilMLDGETDAAFPRGNLEQIKDAPPNSWATVHAEDFVTFSELVRRGFHLIDMRGEIWTVRRAT*
Ga0070734_1012078633300005533Surface SoilMQHFHAGNLEQIKDAPPNAWATVHAQDFVTFSELVRRGFHLIDMRGEIWTLRRAT*
Ga0070735_1006487823300005534Surface SoilEGALDGDEQTETPVQHFHAGNLEKIKDAPPNTWATVNRLDAVTLSELARRGFHLVDMSGEVWTVHRAG*
Ga0070761_1087326123300005591SoilMQHFHAGNLHQIKDAPPGAWATVRASDVVTISELARRGFHLVDMSGEVWTMHRAG*
Ga0066788_1017824113300005944SoilMQHFDVGNCHQIKDAPPDTWATVHCRDVVTMSELARRGFHLVDMSGEVWTMHREG*
Ga0070765_10175937523300006176SoilMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG*
Ga0105240_1120059213300009093Corn RhizosphereMQHFHAGNRHKIKDAPPNTWATVDCRDVVTRSELARRGFHLVDMSGEVWTMRRMG*
Ga0116129_100827123300009633PeatlandMQHFHVGNRHQIKDTAPNTWATVHCRDVVTMSELARRGFHLIDMSGDVWTMHREA*
Ga0116129_110222623300009633PeatlandMQHFHAGNLDKIKDAPPNTWATVHRRDVVTLSELARRGFHLIDMSGEMWTMRRAG*
Ga0123357_1086229213300009784Termite GutMRGHGEEGGRLDHFHAGNLDQIKDAPPNAWATVHCLDEMTMSELARYGFHLVDMSGEVWTMRRVG*
Ga0123355_1092579323300009826Termite GutEGGRLDHFHAGNLDRIKDAPPNAWATVHCLDEMTMSELARHGFHLVDMSGEVWTMRRVG*
Ga0123356_1198600313300010049Termite GutMRGRSNKGERVDHFHAGNLDRIKDAPPNAWATVHCLDKMTMSELARHGFHLVDMSGEVWT
Ga0074046_1001082243300010339Bog Forest SoilMENPMQHFHVGNLDKIRDVQPDAWATVHCNDFVTFSELVRRGFHLVDMRGEIWTMRRPG*
Ga0074046_1026581813300010339Bog Forest SoilMTNQSVESPMQHFHVGNIDQIKDAPPNSWATVHSYDRVTFSELVRRGFHLVDMRGELWTMLRAG*
Ga0074045_1011695123300010341Bog Forest SoilMESPMQHFHVGNIDQIKDAPPNSWATVHSYDRVTFSELVRRGFHLVDMRGELWTMLRAG*
Ga0134125_1266284723300010371Terrestrial SoilEAPGDGRTETAMQHFHAGNRHKIKDAPPNTWATVHSGDVVTRSELARRGFHLIDMSGEVWTMRRGG*
Ga0105239_1248491813300010375Corn RhizosphereMQHFHAGNRHKIKDAPPNTWATVDCRDIVTRSELARRGFHLVDMSGEVWTMRRMG*
Ga0126381_10296263413300010376Tropical Forest SoilMQHFHVGNLDKIKDAPADTWATVHRRDVVTLSELARRGFHLIDMSGEFWTMHREG*
Ga0136449_10374006513300010379Peatlands SoilLVEGGRVRGQEIEERPMQHFHAGNLHQIKDAPPGAWATVHASDVVTISELARRGFHLVDMSSEIWTMHRAG*
Ga0126357_106940223300010864Boreal Forest SoilMQHFDVGNRHQIKDAPPNTWATVHRRDVVTMSELARRGFHLVDMSGEVWTMHREG*
Ga0126357_112635423300010864Boreal Forest SoilERTRSTATDTETKMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG*
Ga0126346_125335013300010865Boreal Forest SoilRTRSTATDTETPMQHFDVGNRHQIKDAPPNTWATVHRRDVVTMSELARRGFHLVDMSGEVWTMHREG*
Ga0126359_178333213300010869Boreal Forest SoilQGRTRSTATDTETPMQHFDVGNRHQIKDAPPNTWATVHRRDVVTMSELARRGFHLVDMSGEVWTMHREG*
Ga0150983_1014381813300011120Forest SoilGEDTLDGDRQTETAMQHFHAGNLDKIKDAPPNTWATVHRRDVVTLSELARRGFHLIDMSGEMWTMRRAG*
Ga0150983_1201114823300011120Forest SoilTAPDTETKMQHFHVGNRHQIKDTPPDTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG*
Ga0153951_105113323300011404Attine Ant Fungus GardensMENPMQHFESRNLHKIRDMEPHTFATVHSRDAVTFSELTRRGFHLVDMSGEVWTMLRPGRPPAPRSTD*
Ga0153943_102122713300012177Attine Ant Fungus GardensMQHFHAGNLHQIKDAPPGAWAKVHASDVVTISELARRGFHLVDMTGEVWTMHRAG*
Ga0153928_100739013300012677Attine Ant Fungus GardensRETSMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLVDMSGEVWTMHREG*
Ga0181534_1027122623300014168BogMQHFHAGNLHQIKDAPPGAWATVHASDAVTISELARRGFHLVDMSGEVWTMHRAG*
Ga0181535_1048889323300014199BogDGKRSKEIPMQHYNAGNLHQIKDAPPDTWATVYASDVVTISELARRGFHLVDMSGEIWTMHRAG*
Ga0181526_1005808323300014200BogMQHYNAGNLHQIKDAPPDTWATVYASDVVTISELARRGFHLVDMSGEIWTMHRAG*
Ga0182041_1144537913300016294SoilIGNLDQIHDLPPNTWVTVDANDVVTFSELSRRGFHLVDMRGKLWTMRRPG
Ga0187820_115440213300017924Freshwater SedimentTPMQHFHAGNRHKIKDAPPNTWATVHSGDVVTRSELARRGFHLIDMSGEVWTMRRGD
Ga0187879_1084351423300017946PeatlandMQHFHAGNLHQIKDAPPGAWATVHASDAVTISELARRGFHLVDMSGEVWTMHRAG
Ga0187776_1047580723300017966Tropical PeatlandMQHFHIGNLDKIREVQPDAWATVHASDFVTFSELVRRGFHLVDMRGEIWTMRRRGVRFKA
Ga0187781_1128594213300017972Tropical PeatlandFDTHNLDRIRDIEPNTWATVRADDVVTISELTRRGFHLVDMRGELWVMRRPG
Ga0187822_1037556223300017994Freshwater SedimentDLTGRALDGRQGTETPMQHFHAGNRHKIKDAPPNTWATVHSGDVVTRSELARRGFHLIDMSGEVWTMRRGG
Ga0187884_1020799323300018009PeatlandMQHFHAGNLHQIKDAPPGAWATVHASDAVTISELARRGFHLVDMSGEVWTMHRA
Ga0187883_1063176113300018037PeatlandMQHYNAGNLHQIKDAPPDTWATVYASDVVTISELARRGFHLVDMSGEIWTMHRAG
Ga0187855_1035210313300018038PeatlandMQHFHAGNLHQIKDAPPDTWATVYASDVVTISELARRGFHLVDMSGEIWTMHRAG
Ga0187851_1066316313300018046PeatlandMQHFNAGNLHQIKDAPPDTWATVYASDVVTISELARRGFHLVDMSGEIWTMHRAG
Ga0187765_1037214713300018060Tropical PeatlandMQHFHAGNLHQIKDAPPDTWATVSASDMVTISELARRGFRLVDMTGEVWTMHRAR
Ga0187769_1076282923300018086Tropical PeatlandMQHFHIGNLDKIRDVKPDAWATVHANDFVTFSELVRRGFHLVDMRGEIWTMRRRG
Ga0182022_120535113300019785FenMSPTGGQGRTRSTALDTETKMQHFDVGNLHRIKDAPPNTWATVHCRDVVTQSELARRGFHLVDMSGEVWTMRRAG
Ga0210399_1022251623300020581SoilRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0210405_1134210413300021171SoilAAEAAISPAPDQGRTRSTAPDTETKMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0210386_1023125613300021406SoilETKMQHFHVGNRHQIKDTSPDTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0210386_1157363423300021406SoilGRVDEEAPSEHFHAGNLERIKDAPPNATAAVHRRDVVTMSELARRGFHLVDMSGEVWTMRRAG
Ga0210383_1054290413300021407SoilATEPAISPALSPGRTGSTAPDTETPMQHFHVGNRHQIKDAPPNTWATVHRSDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0210391_1127398923300021433SoilLCDAAEAAISPASGQGRTRSTATDTETKMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0213879_1026803813300021439Bulk SoilMENTMQHFHAGNLDKIRDVEPDAWATVHANDFVTFSELVRRGFHLVDMRGEIWTMRRPG
Ga0210390_1114530223300021474SoilMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLVDMSGEVWTMHREG
Ga0210392_1146846023300021475SoilSPTLGHGRTRSTATDTETPMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLVDMSGEVWTMHREG
Ga0210410_1015059123300021479SoilSPASGQGRTRSTATETETPMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLVDMSGEVWTMHREG
Ga0210409_1049785923300021559SoilAPGQGRTRSAATGTETPMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0222728_113012213300022508SoilGTRSTATETKMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0242656_112783813300022525SoilTRSTATDTETPMQHFHVGNRHQIKDAPPNTWATVNCRDVVTMSELARRGFHLVDMSGELWTMRRGG
Ga0242664_112083523300022527SoilRTRSTATDTETPMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLVDMSGEVWTMHREG
Ga0242664_113447713300022527SoilRTRSTATDTETPMQHFHVGNRHQIKDAPPNTWATVNCRDVVTMSELARRGFHLVDMSGEVWTMRRGG
Ga0242658_101248513300022530SoilTATDTETPMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLVDMSGEVWTMHREG
Ga0242658_115076523300022530SoilTRSTATDTETPMQHFHVGNRHQIKDAPPNTWATVNCRDVVTMSELARRGFHLVDMSGEVWTMRRGG
Ga0242660_123246513300022531SoilGRTRSTAPETETKMQHFHVGNRHQIKDAPPDTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0242673_107731623300022716SoilMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLVDMSGEFWTMHREG
Ga0242666_109838313300022721SoilRVRRQQIEERSMQHFHAGNLHQIKDAPPGAWATVHASDAVTISELARRGFHLVDMSGEDWTMHRAG
Ga0242654_1026897913300022726SoilIRTRSTATETETPMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0242654_1042158013300022726SoilSTAPETETKMQHFHVGNRHQIKDAPPDTWATVHCRDVVTMSELARRGFHLVDMSGEVWTMHREG
Ga0207663_1143742613300025916Corn, Switchgrass And Miscanthus RhizosphereNLDRIRDAPPKATAAVHRHDVMTMSELARRGFHLVDMSGEVWTMRREG
Ga0208987_105618013300027496Forest SoilRMRSRATDTERPMQHFHVGNRHQIKDAPPDTWATVHCRDVVTMSELARRGFHLIDMSGQVWTMHREG
Ga0209115_113738213300027567Forest SoilTAPDTETKMQHFHVGNRHQIKDTPPDTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0209530_106865023300027692Forest SoilMQHFHVGNRHQIKDTPPDTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0209248_1016644023300027729Bog Forest SoilMQHFHAGNLHQIKDAPPGAWATVRASDVVTISELARRGFHLVDMSGEVWTMHRAG
Ga0209772_1001699723300027768Bog Forest SoilMQHFHAGNLHQIKDAPPGAWATVHAGDAVTISELARRGFHLVDMSGEVWTMHRAG
Ga0209656_1040153513300027812Bog Forest SoilMQHFHVGNIDQIKDAPPNSWATVHSYDRVTFSELVRRGFHLVDMRGELWTMLRAG
Ga0209040_1036755213300027824Bog Forest SoilMQHFHVGNIDQIKDAPPNSWATVHSYDRVTFSELVRRGFHLVDMRGELWTML
Ga0209039_1007286723300027825Bog Forest SoilMQHFHVGNIDQIKDAPPNSWATVHSYDRVTFSELARRGFHLVDMRGELWTMLRAG
Ga0209039_1034945223300027825Bog Forest SoilMENPMQHFHVGNLDKIRDVQPDAWATVHCNDFVTFSELVRRGFHLVDMRGEIWTMRRPG
Ga0209039_1042984213300027825Bog Forest SoilMRHFHAGNLHQIKDAPPGAWATVNASDVVTISELARRGFHLVDMSGHVWTMLRAG
Ga0209060_1002060943300027826Surface SoilMQHFHAGNLHQIKDAPPGAWATVKANDAVTISELARRGFHLVDMSGDVWTMLRAG
Ga0209060_1033176723300027826Surface SoilMGRRSIGRDLLDFEGSKEKPMQHFHAGNLEQIKDAPPNAWATVHAQDFVTFSELVRRGFHLIDMRGEIWTLRRAT
Ga0209380_1043104213300027889SoilATDTETPMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLVDMSGEFWTMHREG
Ga0209067_1097029913300027898WatershedsMRHFHAGNLHQIKDAPPGAWATVNASDVVTISELARRGFHLVDMSGAVWTMLRGG
Ga0209006_1012210223300027908Forest SoilMKLCSAAEPAISPAGGQGRTRSTAPETETKMQHFHVGNRHQIKDAPPDTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0209006_1022718823300027908Forest SoilLTATDTETLMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLVDMSGEVWTMHREG
Ga0209006_1142732613300027908Forest SoilMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLVDMSGEVWTMHR
Ga0209168_1013556623300027986Surface SoilEGALDGDEQTETPVQHFHAGNLEKIKDAPPNTWATVNRLDAVTLSELARRGFHLVDMSGEVWTVHRAG
Ga0222748_114002613300029701SoilSKEKPMQHFHAGNLHQIKDAPPGAWATVAASDVVTISELARRGFHLVDMSGEVWTMHRAG
Ga0311368_1039961723300029882PalsaMQHFHAGNLHQIKDAPPGAWATVHARDAVTISELARRGFHLVDMSGEVWTMHRAG
Ga0311352_1144719413300029944PalsaMQHFHAGNLHQIKDAPPGAWATVHASDAVTISELARRGFHLVDMRGEVWTMHRAG
Ga0307482_107682723300030730Hardwood Forest SoilEDTLDGDPKTETAMQHFHAGNLDKIKDAPPNTWATVDRRDVVTLSELARRGFHLVDMSGEMWTMRRAG
Ga0307482_117504123300030730Hardwood Forest SoilDTETPMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMRRAG
Ga0307482_121447623300030730Hardwood Forest SoilRSTPPDTETPMQHFHVGNRHEIKDAPPNTWATVHCRDVVTMSELARRGFHLVDMSGEVWTMHREG
Ga0073999_1095344413300030839SoilTATDTETKMQHFDVGNRHQIKDAPPNTWATVHRRDVVTMSELARRGFHLVDMSGEVWTMHREG
Ga0265770_109890013300030878SoilPQQIEERSMQHFHAGNLHQIKDAPPGAWATVHASDAVTISELARRGFHLVDMRGEVWTMHRAG
Ga0265773_100879113300031018SoilTETSMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLVDMSGEVWTMHREG
Ga0138301_141479713300031022SoilRMRPAATDTETSMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLVDMSGEVWTMHREG
Ga0138301_142959113300031022SoilMDRETSMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHRE
Ga0302325_1083485823300031234PalsaMQHFELRNLHKIRDMEPHTFATVHSRDTVTFSELARRGFHLVDMSGEVWTMLRPGQRPASQPGRSP
Ga0170819_1671397923300031469Forest SoilMAPDTETKMQHFHVGNRHQIKDAPPDTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0170818_10157851213300031474Forest SoilTETPMQHFHVGNRHQIKDTPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0302326_1186918513300031525PalsaNLDRIRDSQPNASATVHRHDVVTISELTRRGFHLVDMSGEIWTMRRSG
Ga0302326_1270015523300031525PalsaTRSMENPMQHFELRNLHKIRDMEPHTFATVHSRDTVTFSELARRGFHLVDMSGEVWTMLRPGQAPAPRSGRSS
Ga0310686_10189900093300031708SoilMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMHREG
Ga0310686_11301912213300031708SoilQHFHVGNRHQIKDTPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWMMHREG
Ga0310686_11405247933300031708SoilMQHFESRNLHKIRDMGPHTFATVHSKDAVTFSELARCGFHLVDMSGEVWTMLRPGQAPAHQSGNS
Ga0307476_1099199213300031715Hardwood Forest SoilKPAISPIPGQGRTRSTATDTETPMQHFHVGNRHQIKDAPPNTWATVHCRDVVTMSELARRGFHLIDMSGEVWTMRRAG
Ga0318566_1032592223300031779SoilMQHFHAGNRHKIKDTPPNTSATVHCRDVVTMSELARRGFHLVDMSGEVWTMRREG
Ga0306923_1215184023300031910SoilMQHFHAGNRHKIKDTPPNTSATVHCRDVVTMSELARRGFHLVDMSGEVWT
Ga0310912_1056896623300031941SoilQHFHAGNRHKIKDTPPNTSATVHCRDVVTMSELARRGFHLVDMSGEVWTMRREG
Ga0318562_1022358623300032008SoilMQHFHAGNLHQIKDAPPNTWATVRATDVVTISELARRGFHLVDKRGDVWTMHRAV
Ga0306920_10305548913300032261SoilAPRSREDAIDGDGQTETPMQHFHAGNLDKIKDAPPNTWATVHCRDIVTMSELARRGFHLVDMSGEIWTMRREG
Ga0306920_10415159313300032261SoilMSLALDPPEDAVDGDRQTETSMQHFHAGNRHKIKDTPPNTSATVHCRDVVTMSELARRGFHLVDMSGEVWTMRREG
Ga0348332_1126820713300032515Plant LitterHFDVGNRHQIKDAPPNTWATVHRRDVVTMSELARRGFHLVDMSGEVWTMHREG
Ga0335078_1055233623300032805SoilMQHFHAGNRHKIKDAPPNTWATVHCRDVLTMSELARRGFHLVDMSGEVWMMRREG
Ga0335081_1092979023300032892SoilMQHFHAGNLHQIKDAPPGAWATVDASDVVTISELARRGFHLVDMSGEVWTMHRAG
Ga0335069_1018389033300032893SoilMQHFHAGNLHQIKDAPPDTWATVNASDTVTISELARRGFHLVDMRGEIWTMHRAG
Ga0335074_1107515013300032895SoilSDEQTETPMQHFHAGNLEKIKDAPPNTWATVHCRDIVTMSELARRGFHLVDMSGEVWTMHRAG
Ga0335074_1129601113300032895SoilLDGDEQTDTSMQHFHVGNLEKIKDAPPNTWATVHCRDIVTMSELARRGFHLVDMSGEVWTMHRAG
Ga0335075_1101019723300032896SoilPMQHFHAGNLEKIKDAPPNTWATVHCRDIVTMSELARRGFHLVDMSGEVWTMHRAG
Ga0335071_1096961323300032897SoilMQHFHAGNLDKIRDAPPDAWATVRADDVVTFSELVRRGFHLVDMRGEIWTMRRPG
Ga0335072_1005917613300032898SoilMQHFHVGNLEKIKDAPPNTWATVHCRDIVTMSELARRGFHLVDMSGE
Ga0335072_1088408423300032898SoilTPMQHFHAGNLEKIKDAPPNTWATVHCRDIVTMSELARRGFHLVDMSGEVWTMHRAG
Ga0335076_1002626933300032955SoilMQHFHAGNLHQIKDAPPGAWATVRASDVVTISELARRGFHLVDMTGDVWTMHRAG
Ga0335076_1003387323300032955SoilMQHFHAGNLHQIKDAPPGAWATVRASDVVTISELARRGFHLVDMTGEVWTMHRAR
Ga0335073_1021205023300033134SoilMRHFHAGNLHQIKDALPDTWATVNARDVVTISELARRGFHLVDMTGEVWTMHRAG
Ga0318519_1108288313300033290SoilVQRSNPPYMSLALDPPEDAVDGDRQTETSMQHFHAGNRHKIKDTPPNTSATVHCRDVVTMSELARRGFHLVDMSGEVWTMRREG
Ga0326727_1011536413300033405Peat SoilMQHFHIGNLDKIRDVQPDAWATVHCNDFVTFSELVRRGFHLVDMRGEIWTMRRPG
Ga0371489_0003426_6940_71193300033755Peat SoilMENAMQHFHIGNLDKIRDVQPDAWATVHCNDFVTFSELVRRGFHLVDMRGEIWTMRRPG
Ga0370515_0358707_1_1443300034163Untreated Peat SoilLHQIKDAPPGAWATVHASDAVTISELARRGFHLVDMSGEVWTMHRAG


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