Metagenome / Metatranscriptome Family F047162

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047162
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	53 residues
Representative Sequence	MAEEQGRGTGAGRPALNIERIYSTTVPAEELARTLADHFRAQEFEAQVYRTS
Number of Associated Samples	99
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.27 %
% of genes near scaffold ends (potentially truncated)	87.33 %
% of genes from short scaffolds (< 2000 bps)	74.67 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (38.667 % of family members)
Environment Ontology (ENVO)	Unclassified (34.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.25% β-sheet: 0.00% Coil/Unstructured: 63.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF02955	GSH-S_ATP	4.67
PF08031	BBE	3.33
PF02517	Rce1-like	2.67
PF13561	adh_short_C2	2.00
PF02866	Ldh_1_C	2.00
PF01546	Peptidase_M20	2.00
PF13460	NAD_binding_10	2.00
PF13191	AAA_16	1.33
PF00440	TetR_N	1.33
PF13384	HTH_23	1.33
PF08014	DUF1704	1.33
PF14329	DUF4386	1.33
PF13365	Trypsin_2	1.33
PF00561	Abhydrolase_1	1.33
PF00106	adh_short	0.67
PF06441	EHN	0.67
PF00196	GerE	0.67
PF06094	GGACT	0.67
PF14325	DUF4383	0.67
PF04075	F420H2_quin_red	0.67
PF12680	SnoaL_2	0.67
PF00892	EamA	0.67
PF00909	Ammonium_transp	0.67
PF04264	YceI	0.67
PF01323	DSBA	0.67
PF01161	PBP	0.67
PF05988	DUF899	0.67
PF01551	Peptidase_M23	0.67
PF17101	Stealth_CR1	0.67
PF14207	DpnD-PcfM	0.67
PF11139	SfLAP	0.67
PF02738	MoCoBD_1	0.67
PF00202	Aminotran_3	0.67
PF07730	HisKA_3	0.67
PF07690	MFS_1	0.67
PF01070	FMN_dh	0.67
PF12697	Abhydrolase_6	0.67
PF06439	3keto-disac_hyd	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG0189	Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily	Translation, ribosomal structure and biogenesis [J]	9.33
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	3.33
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	2.67
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	2.67
COG0039	Malate/lactate dehydrogenase	Energy production and conversion [C]	2.00
COG3930	Uncharacterized conserved protein, DUF1704 domain	Function unknown [S]	1.33
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.67
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.67
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.67
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.67
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.67
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.67
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.67
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.67
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.67
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.67
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
All Organisms	root	All Organisms	47.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
cellular organisms	root	All Organisms → cellular organisms	47.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	32.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3.33 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.67 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.67 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.67 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.67 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.67 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.67 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	2.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1.33 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.67 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.67 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.67 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.67 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.67 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.67 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.67 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.67 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	2.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1.33 %
unclassified Streptosporangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae	0.67 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.67 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.67 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.67 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.67 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.67 %
Agromyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	0.67 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	1.33 %
unclassified Microlunatus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → unclassified Microlunatus	1.33 %
Amycolatopsis pithecellobii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis pithecellobii	0.67 %
Rhodococcus cavernicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus cavernicola	0.67 %
unclassified Mycolicibacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → unclassified Mycolicibacterium	0.67 %
unclassified Agromyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → unclassified Agromyces	0.67 %
Streptosporangiaceae bacterium NEAU-GS5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	0.67 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	0.67 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	0.67 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.67 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
Arthrobacter sp. ISL-28	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. ISL-28	1.33 %
Microlunatus sp. Gsoil 973	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → unclassified Microlunatus → Microlunatus sp. Gsoil 973	1.33 %
Agromyces sp. Soil535	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → unclassified Agromyces → Agromyces sp. Soil535	0.67 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	0.67 %
Mycolicibacterium sp. YH-1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → unclassified Mycolicibacterium → Mycolicibacterium sp. YH-1	0.67 %
Amycolatopsis pithecellobii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis pithecellobii	0.67 %
Rhodococcus cavernicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus cavernicola	0.67 %
Streptosporangiaceae bacterium NEAU-GS5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	0.67 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	0.67 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.67 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000443\|F12B_12311333	Not Available	608	Open in IMG/M
3300000559\|F14TC_101429026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300000787\|JGI11643J11755_11824420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	944	Open in IMG/M
3300000956\|JGI10216J12902_103868037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1850	Open in IMG/M
3300001686\|C688J18823_10724579	Not Available	632	Open in IMG/M
3300004157\|Ga0062590_102733568	Not Available	526	Open in IMG/M
3300004463\|Ga0063356_101248027	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300004463\|Ga0063356_106324321	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005718\|Ga0068866_10111873	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300005937\|Ga0081455_10070703	All Organisms → cellular organisms → Bacteria	2896	Open in IMG/M
3300005937\|Ga0081455_10859951	Not Available	566	Open in IMG/M
3300006194\|Ga0075427_10084484	Not Available	577	Open in IMG/M
3300006573\|Ga0074055_11605550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. ISL-28	757	Open in IMG/M
3300006581\|Ga0074048_13330651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. ISL-28	712	Open in IMG/M
3300006918\|Ga0079216_11307452	Not Available	593	Open in IMG/M
3300009789\|Ga0126307_10046927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3369	Open in IMG/M
3300009840\|Ga0126313_10190926	Not Available	1568	Open in IMG/M
3300010036\|Ga0126305_10338047	Not Available	984	Open in IMG/M
3300010036\|Ga0126305_10800076	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300010039\|Ga0126309_10006408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4616	Open in IMG/M
3300010039\|Ga0126309_10249009	Not Available	1006	Open in IMG/M
3300010039\|Ga0126309_11022038	Not Available	556	Open in IMG/M
3300010040\|Ga0126308_10060853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	2223	Open in IMG/M
3300010041\|Ga0126312_10032613	All Organisms → cellular organisms → Bacteria	3478	Open in IMG/M
3300010041\|Ga0126312_10512245	Not Available	859	Open in IMG/M
3300010041\|Ga0126312_10682398	Not Available	741	Open in IMG/M
3300010042\|Ga0126314_10161174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → unclassified Microlunatus → Microlunatus sp. Gsoil 973	1567	Open in IMG/M
3300010044\|Ga0126310_10534581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → unclassified Microlunatus → Microlunatus sp. Gsoil 973	863	Open in IMG/M
3300010044\|Ga0126310_11369712	Not Available	575	Open in IMG/M
3300010044\|Ga0126310_11546670	Not Available	546	Open in IMG/M
3300010045\|Ga0126311_10222629	Not Available	1387	Open in IMG/M
3300010045\|Ga0126311_10235965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → unclassified Agromyces → Agromyces sp. Soil535	1351	Open in IMG/M
3300010045\|Ga0126311_11296451	Not Available	605	Open in IMG/M
3300011000\|Ga0138513_100071937	Not Available	534	Open in IMG/M
3300012506\|Ga0157324_1052724	Not Available	534	Open in IMG/M
3300012892\|Ga0157294_10213088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	575	Open in IMG/M
3300012915\|Ga0157302_10199005	Not Available	717	Open in IMG/M
3300012938\|Ga0162651_100005864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1361	Open in IMG/M
3300012939\|Ga0162650_100003073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1792	Open in IMG/M
3300012941\|Ga0162652_100013346	Not Available	1057	Open in IMG/M
3300012941\|Ga0162652_100057033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	645	Open in IMG/M
3300013306\|Ga0163162_11648907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300015077\|Ga0173483_10810419	Not Available	542	Open in IMG/M
3300015201\|Ga0173478_10637854	Not Available	559	Open in IMG/M
3300015373\|Ga0132257_102962890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis pithecellobii	619	Open in IMG/M
3300015374\|Ga0132255_100351557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2135	Open in IMG/M
3300015374\|Ga0132255_102381617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	808	Open in IMG/M
3300018028\|Ga0184608_10004206	All Organisms → cellular organisms → Bacteria	4539	Open in IMG/M
3300018028\|Ga0184608_10319286	Not Available	682	Open in IMG/M
3300018054\|Ga0184621_10062405	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300018066\|Ga0184617_1067282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	946	Open in IMG/M
3300018067\|Ga0184611_1091022	Not Available	1054	Open in IMG/M
3300018072\|Ga0184635_10182766	Not Available	837	Open in IMG/M
3300018073\|Ga0184624_10021212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2426	Open in IMG/M
3300018073\|Ga0184624_10042805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1804	Open in IMG/M
3300018073\|Ga0184624_10088801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus cavernicola	1310	Open in IMG/M
3300018074\|Ga0184640_10262000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	785	Open in IMG/M
3300018075\|Ga0184632_10073647	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M
3300018081\|Ga0184625_10007742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4873	Open in IMG/M
3300018081\|Ga0184625_10010761	All Organisms → cellular organisms → Bacteria	4207	Open in IMG/M
3300018081\|Ga0184625_10186323	Not Available	1087	Open in IMG/M
3300018465\|Ga0190269_10387288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	858	Open in IMG/M
3300018469\|Ga0190270_11686348	Not Available	687	Open in IMG/M
3300018481\|Ga0190271_13347126	Not Available	537	Open in IMG/M
3300018481\|Ga0190271_13402986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300018481\|Ga0190271_13718772	Not Available	511	Open in IMG/M
3300018920\|Ga0190273_11841507	Not Available	553	Open in IMG/M
3300019233\|Ga0184645_1345625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300019767\|Ga0190267_10056192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1378	Open in IMG/M
3300019767\|Ga0190267_10517166	Not Available	711	Open in IMG/M
3300019767\|Ga0190267_11117755	Not Available	568	Open in IMG/M
3300019867\|Ga0193704_1002100	All Organisms → cellular organisms → Bacteria	3881	Open in IMG/M
3300019867\|Ga0193704_1023308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1257	Open in IMG/M
3300019867\|Ga0193704_1098486	Not Available	513	Open in IMG/M
3300019869\|Ga0193705_1003228	All Organisms → cellular organisms → Bacteria	3578	Open in IMG/M
3300019873\|Ga0193700_1003876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2240	Open in IMG/M
3300019884\|Ga0193741_1003769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4167	Open in IMG/M
3300020005\|Ga0193697_1032186	Not Available	1310	Open in IMG/M
3300020005\|Ga0193697_1133009	Not Available	568	Open in IMG/M
3300022756\|Ga0222622_11196842	Not Available	559	Open in IMG/M
3300025942\|Ga0207689_10919931	Not Available	738	Open in IMG/M
3300025961\|Ga0207712_11130897	Not Available	698	Open in IMG/M
3300027907\|Ga0207428_10043902	Not Available	3608	Open in IMG/M
3300028704\|Ga0307321_1009120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1667	Open in IMG/M
3300028705\|Ga0307276_10194805	Not Available	531	Open in IMG/M
3300028708\|Ga0307295_10001310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	5443	Open in IMG/M
3300028708\|Ga0307295_10001466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5182	Open in IMG/M
3300028708\|Ga0307295_10117345	Not Available	725	Open in IMG/M
3300028710\|Ga0307322_10082895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300028712\|Ga0307285_10151873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	634	Open in IMG/M
3300028716\|Ga0307311_10001526	All Organisms → cellular organisms → Bacteria	4848	Open in IMG/M
3300028716\|Ga0307311_10038203	Not Available	1253	Open in IMG/M
3300028721\|Ga0307315_10104803	Not Available	835	Open in IMG/M
3300028722\|Ga0307319_10013445	All Organisms → cellular organisms → Bacteria	2496	Open in IMG/M
3300028722\|Ga0307319_10279623	Not Available	551	Open in IMG/M
3300028744\|Ga0307318_10021463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2081	Open in IMG/M
3300028744\|Ga0307318_10079371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1100	Open in IMG/M
3300028744\|Ga0307318_10090307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1032	Open in IMG/M
3300028744\|Ga0307318_10338536	Not Available	529	Open in IMG/M
3300028754\|Ga0307297_10290169	Not Available	589	Open in IMG/M
3300028755\|Ga0307316_10031264	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300028771\|Ga0307320_10061678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1394	Open in IMG/M
3300028771\|Ga0307320_10349994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300028787\|Ga0307323_10226927	Not Available	673	Open in IMG/M
3300028793\|Ga0307299_10137014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	919	Open in IMG/M
3300028796\|Ga0307287_10226390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	709	Open in IMG/M
3300028807\|Ga0307305_10417672	Not Available	605	Open in IMG/M
3300028810\|Ga0307294_10260197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618	Open in IMG/M
3300028814\|Ga0307302_10149617	Not Available	1130	Open in IMG/M
3300028814\|Ga0307302_10379932	Not Available	698	Open in IMG/M
3300028819\|Ga0307296_10249038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	966	Open in IMG/M
3300028819\|Ga0307296_10486999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → unclassified Mycolicibacterium → Mycolicibacterium sp. YH-1	675	Open in IMG/M
3300028824\|Ga0307310_10000837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10900	Open in IMG/M
3300028828\|Ga0307312_10027827	All Organisms → cellular organisms → Bacteria	3274	Open in IMG/M
3300028828\|Ga0307312_10066096	Not Available	2186	Open in IMG/M
3300028872\|Ga0307314_10010693	Not Available	1983	Open in IMG/M
3300028876\|Ga0307286_10002093	All Organisms → cellular organisms → Bacteria	5840	Open in IMG/M
3300031058\|Ga0308189_10473361	Not Available	534	Open in IMG/M
3300031091\|Ga0308201_10007811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1845	Open in IMG/M
3300031114\|Ga0308187_10008009	Not Available	2041	Open in IMG/M
3300031548\|Ga0307408_101851975	Not Available	578	Open in IMG/M
3300031731\|Ga0307405_11976652	Not Available	521	Open in IMG/M
3300031740\|Ga0307468_102458828	Not Available	509	Open in IMG/M
3300031824\|Ga0307413_10235340	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300031901\|Ga0307406_11616731	Not Available	573	Open in IMG/M
3300031911\|Ga0307412_10679795	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	881	Open in IMG/M
3300031911\|Ga0307412_12156852	Not Available	518	Open in IMG/M
3300031995\|Ga0307409_100344058	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300031995\|Ga0307409_100434012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1263	Open in IMG/M
3300031995\|Ga0307409_100460829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1229	Open in IMG/M
3300031995\|Ga0307409_100908437	Not Available	894	Open in IMG/M
3300031995\|Ga0307409_101505741	Not Available	700	Open in IMG/M
3300032002\|Ga0307416_101549667	Not Available	768	Open in IMG/M
3300032004\|Ga0307414_10960732	Not Available	785	Open in IMG/M
3300032005\|Ga0307411_11729327	Not Available	579	Open in IMG/M
3300032005\|Ga0307411_11786085	Not Available	571	Open in IMG/M
3300032126\|Ga0307415_100939259	Not Available	800	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.67%
Host-Associated	Host-Associated	23.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.00%
Plants	Host-Associated → Plants	23.33%
Aquatic	Environmental → Aquatic	12.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.00%
Sediment	Environmental → Aquatic → Sediment	12.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.33%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	3.33%
Freshwater	Environmental → Aquatic → Freshwater	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.33%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	3.33%
Loam	Environmental → Terrestrial → Soil → Loam	2.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.33%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	3.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	38.67%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	15.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	12.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.67%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	3.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.00%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.33%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.33%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.33%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F12B_123113331	3300000443	Soil	MTEMQGRRTGALNIERIYSTTVPAEELARTLADHFRAQEFEAQVYRTSENRTVMQARKE
F14TC_1014290261	3300000559	Soil	MAEGQSSGTGAGRPALNFERIYGTTVSADEVAQALADHFRSQEF
JGI11643J11755_118244203	3300000787	Soil	MAEEQGGGTGAGRPALNIERIYSTTVRAEELARTLAEHFRAQDFEAQVYRTSGDR
JGI10216J12902_1038680371	3300000956	Soil	MTEQQGSSMSAGRPALNFERIYGTTVSADEVAQALANHFRAQEFEAQVYRSN
C688J18823_107245791	3300001686	Soil	MAEGQSSSMSAGRPALNFERIYGTTVSADEVAQALADHFRAQEFEAQVYRSNENR
Ga0062590_1027335681	3300004157	Soil	MAEQQQGGVTAGGRPALNYERIYGTTVSAEEVARALADHFRAQEFEAQVYSTSENRTVMQARKESLWRQLLG
Ga0063356_1012480273	3300004463	Arabidopsis Thaliana Rhizosphere	MAEEQGRGTGAGRPALNIERIYSTTVPAEELARTLADHFRAQEFEAQVYRTS
Ga0063356_1063243211	3300004463	Arabidopsis Thaliana Rhizosphere	MAEEQGRGPRVGRPALNFERIYGTTVPAEEVARALADHFRAQEFEAQVYRSSENRTV
Ga0068866_101118732	3300005718	Miscanthus Rhizosphere	MFWSEEWSERKMADEQRRGTGALNFERIYSTTVPAEEVARALADHF
Ga0081455_100707035	3300005937	Tabebuia Heterophylla Rhizosphere	MTEEQGRGVGGGRPALNIERIYSTTVPAEELAQTLADHFRAQDFEAQVYRTSGD
Ga0081455_108599512	3300005937	Tabebuia Heterophylla Rhizosphere	MTEEQGSATRAGRPALNIERIYSTTVPAEELARTLADHFR
Ga0075427_100844842	3300006194	Populus Rhizosphere	MAEEQGRATGAGRPALNIERIYSTTVPAEELARTLADHFRAQEFEAQVYRTSGDRTVMQARKES
Ga0074055_116055502	3300006573	Soil	MAEEQGRGTRAGRPALNIERIYSTTVPAEELARTLGDHFRAQEFEAQVYRTSGDRTVMQARKESLWRQLL
Ga0074048_133306511	3300006581	Soil	MAEEQGRGTRAGRPALNIERIYSTTVPAEELARTLGDHFRAQEFEAQVYRTSGDR
Ga0079216_113074522	3300006918	Agricultural Soil	MAEEQGRATGAGRPALNIERIYRTTVTAEEIARALADHFRAQEFEAQVYR
Ga0075418_121088932	3300009100	Populus Rhizosphere	MAEEQGRGTGTGRPALNIERIYQTTIPAEELARTL
Ga0075423_102249331	3300009162	Populus Rhizosphere	MDGTEASVEGTKMAEMRGRGTGAGRPVLNIERIYSTTVSAEELARALADHFRAQDFE
Ga0126307_100469276	3300009789	Serpentine Soil	MTEMQGRGTGALNIERIYSTTVSAEELARTLADHFRPQEFEAQVYRTSENRTVMQARKKSLWLRDSS*
Ga0126307_101525771	3300009789	Serpentine Soil	MAWSESGGNEMTEVQGRSTGALNIERIYQTTVPADE
Ga0126307_106635951	3300009789	Serpentine Soil	MTEVRGWSTGALNIERIYQTTVPADELAKTLADHFRAQE
Ga0126307_107540781	3300009789	Serpentine Soil	MTEVPGWSTGALNIERIYQTTVPADELAKTLADHFRAQE
Ga0126313_101909261	3300009840	Serpentine Soil	MAEGQGSSTGAGRPALNFERIYGTTVPAEEVAQALADHFRKQ
Ga0126305_103380471	3300010036	Serpentine Soil	MTQQQGSGAAAGQRPALNIERIYQTTVTAEELAQALANHFRAQE
Ga0126305_108000761	3300010036	Serpentine Soil	MADEQGSGSGAGRPALNIERIYVTNVSAEELARTLADHFRAQE
Ga0126309_100064087	3300010039	Serpentine Soil	MAEEQGRATGAGRPALNIERIYRTTVTAEEIARALADHFRAQEFEAQVYRTSEDRTVMQARKE
Ga0126309_102490092	3300010039	Serpentine Soil	MAEEQSRATGAGRAALNIERIYSTTVTAEEIARALADHFRAQEFEAQVYRTSEDRTVMQARKE
Ga0126309_110220381	3300010039	Serpentine Soil	MADGQGRGMGAGRPALNIERIYSTTVPAEELAQALADHFRAQEFETQVYRTSEDRT*
Ga0126308_100608533	3300010040	Serpentine Soil	MADEQGSGRGAGRPALNIERIYITAVPADELARTLADHFRAQEFEAQVYSTSGNRTVMQA
Ga0126312_100326138	3300010041	Serpentine Soil	MTEVQGRGTGALNIERIYSTTVPADELAKTLADHFRAQEFEAQVYRTSGDRTV
Ga0126312_105122452	3300010041	Serpentine Soil	MTEVQGRGTGALNIERIYQTTVPADELAKTLADHFRAQEFEEQVYSTSGDRTVMQARKESQWRQ
Ga0126312_106823981	3300010041	Serpentine Soil	MAEMQGKGMGAGRPALNIERIYSTTVPAEELARAL
Ga0126314_101611741	3300010042	Serpentine Soil	MAEEQGRGAGAGRPALNFERIYGTTVSADEVAKALADHFRAQ
Ga0126310_105345811	3300010044	Serpentine Soil	MAEGQGRGAGAGRPALNFERIYGTTVSADEVAQALADHFRTQEFEAQVYRSSENRTV
Ga0126310_108284931	3300010044	Serpentine Soil	MTEVQGRGTGALNIERIYQTTVPADELAKTLADHFRAQEFEAQVYSTS
Ga0126310_112911521	3300010044	Serpentine Soil	MTEVQGRSTGALNIERIYQTTVPADELAKTLADHFRAQEFEAQVYST
Ga0126310_113697121	3300010044	Serpentine Soil	MAEEQGRGAGAGRPALNFERIYGTTVSADEVAKALADHFRAQEFEAQVYR
Ga0126310_115466702	3300010044	Serpentine Soil	MTEMQGRGTGALNIERIYSTTVSAEELARTLADHFRPQEFEAQVYRTSENRTVMQARK
Ga0126311_102226291	3300010045	Serpentine Soil	MTEVQGRGTGALNIERIYSTTVPVEELARTLADHFRLQEFETQVYRTSENRTVMQARKES
Ga0126311_102359653	3300010045	Serpentine Soil	MAEEQGRATGGGRTALNIERIYSTTVTAEEIARALAD
Ga0126311_112964511	3300010045	Serpentine Soil	MTEVQGRGTGALNIERIYQTTVPADELAKTLADHFRAQEFEAQVYSTSGDRT
Ga0138513_1000719371	3300011000	Soil	MADQQGRGTGALNFERIYSTTVPAEEVARALADHFRMQEFEA
Ga0157324_10527242	3300012506	Arabidopsis Rhizosphere	MADERGRGTGALNFERIYSTTVPAEEVARALADHFRMQDFEAQVYLSNENRTVMQARKESLW
Ga0157294_102130882	3300012892	Soil	MAEEQGGGSGGRPALNIERIYSTTVPAEELARTLADHFRAQEFEAQVYRTSGDRTVMQARKESLWRQLLGVTY
Ga0157302_101990051	3300012915	Soil	MAEEQGRGAGAGRPALNFERIYGTTVSAEEVAQALADH
Ga0162651_1000058641	3300012938	Soil	MAEEQGSGSAGRPALNIERIYSTTVPAEELARTLADHFRAQEFEAQVYRTSGDRTVMQARKE
Ga0162650_1000030733	3300012939	Soil	MAEEQNRGTGAARPALNIERIYSTTVPAEELARALA
Ga0162652_1000133461	3300012941	Soil	MTEGHGRGTGALNFERIYSTTVPAEELARTLADHFRAQDFETQVYRTSENRTVMQARK
Ga0162652_1000570332	3300012941	Soil	MAEEQGSGSSAGRPALNIERIYSTTVPAEELAGTLADHFRAQE
Ga0163162_116489072	3300013306	Switchgrass Rhizosphere	MADEQRRGTGALNFERIYSTTVPAEEVARALADHL
Ga0173483_108104191	3300015077	Soil	MAGEQGRGAGAGRPALNFERIYGTTVSAEEVAQALADHFRAQEF
Ga0173478_106378542	3300015201	Soil	MAEQQQGGVTAGGRPALNYERIYGTTVSAEEVARALADHFRAQ
Ga0132257_1029628901	3300015373	Arabidopsis Rhizosphere	MAEEQGTGTPSGRPALNFERIYGTTVSAEEVARALADHFR
Ga0132255_1003515573	3300015374	Arabidopsis Rhizosphere	MADERGRGTGALNFERIYSTTVPAEEVARALADHFRMQDFEAQVYLSNENRTVMQARK
Ga0132255_1023816171	3300015374	Arabidopsis Rhizosphere	MAEEQGTGTPSGRPALNFERIYGTTVSAEEVARALADHFRGQEFEAQVYRSHENRTVMQARKESLWRQ
Ga0184608_100042065	3300018028	Groundwater Sediment	MADEQSRGTGALNFERIYSTTVPAEEVARALADHFRMQDFEAQVYRS
Ga0184608_103192861	3300018028	Groundwater Sediment	MADKQGRGTGALNFERIYSTTVPAEEVARALADHFRMQEFEAQVYRSNENRTVMQARKESLWRQLLG
Ga0184634_102267901	3300018031	Groundwater Sediment	MTEVQGRSTGALNIERIYQTTVPADELAKTVADHF
Ga0184621_100624051	3300018054	Groundwater Sediment	MAEEQGRGVGAGRPALNIERIYSTTVPADELARTLADHFRAQECEAQVYRTSGDRTVMQARKES
Ga0184617_10672822	3300018066	Groundwater Sediment	MAEEQGRATGAGRSALNIERIYSTTVTAEEIARALADHFRAQEFEAQVYRTSENRTVMQARKESLW
Ga0184617_11434821	3300018066	Groundwater Sediment	MTEVQGRSTGALNIERIYQTTVPADELAKTLADHFRAQEFEAQVYS
Ga0184611_10910221	3300018067	Groundwater Sediment	MTEVQGRGTAALNIQRVYETTVTAEELARTLADHFRAQEFETQVYLTSENRTVMQARKESLWRQLLGVTYA
Ga0184635_101827661	3300018072	Groundwater Sediment	MAEEQGSGSGAGRPALNIERIYSTTVSAEELARTLADHFRAQEFEAQVYRTS
Ga0184624_100212123	3300018073	Groundwater Sediment	MADGQGRGTGALNFERIYSTTVPAEEVARALADHFRVQDFEAQVYRSNE
Ga0184624_100428051	3300018073	Groundwater Sediment	MAEEQGKGIGAGRPALNIERIYSTTVPAEELARTLADHFRAQEFEAQVYRTSGDRTVMQ
Ga0184624_100888012	3300018073	Groundwater Sediment	MFWSEQWSEREMADEQSRGTGALNFERIYSTTVPAEEVARALADHFRMQDFE
Ga0184640_102620002	3300018074	Groundwater Sediment	MADKQGRGTGALNFERIYSTTVPSEEVARALADHFRMQEFEAQVYRSNENRTVMQARKESLWRQ
Ga0184632_100736472	3300018075	Groundwater Sediment	MAETQGRGTGALNIERIYSTTVPTEELARTLADHFRAQEFETQVYLTSENRTVMQAR
Ga0184625_100077425	3300018081	Groundwater Sediment	MAETQGRGTGALNIERIYSTTVPTEELARTLADHFRAQEFETQVYLTSENRTVMQARKESLWRHLLGVTYALTVVF
Ga0184625_100107611	3300018081	Groundwater Sediment	MAEEQGRGVGAGRPALNIERIYSTTVPADELARTLADHFRAQEFEAQVYRTSGDRTVMQA
Ga0184625_101863233	3300018081	Groundwater Sediment	MAEQQVSGTGAGRPALNIERIYSTTVSAEELARALADHFRAQEFE
Ga0190269_103872881	3300018465	Soil	MAEEQGRGTGAGRPALNIERIYSTTVPAEELARTLADHFRAQ
Ga0190270_116863482	3300018469	Soil	MAEEQGRATGAGRPALNIERIYSTTVTAEEIARALAD
Ga0190271_133471262	3300018481	Soil	MTEVQGRGTAALNIQRVYETTVTAEELARTLADHFRAQEFETQVYRTSENRTVMQARKESLWR
Ga0190271_134029861	3300018481	Soil	MAEEQDRGTGAGRPALNIERIYSTTVPAEELARALADHFRAQEFEAQVYRTSGDRTVMQA
Ga0190271_137187721	3300018481	Soil	MADEQGSGTGAGRPALNIERIYSTTVSAEELARTLADHFRAQ
Ga0190273_118415071	3300018920	Soil	MADEQGSGMVAGRPALNIERIYSTTVAAEEIARALADHFRAQE
Ga0184645_13456251	3300019233	Groundwater Sediment	MAEEQGRGVGAGRPALNIERIYSTTVPADELARTLADHFRAQEFQAQVYRTSGDRTVMQARKE
Ga0190267_100561922	3300019767	Soil	MADTQGGGATTGRPALNFERIYGTTVSAEDVARALADHFRTQEFEAQVYRTSENRTGWSGRSAA
Ga0190267_105171661	3300019767	Soil	MAEEQGRGTGAGRPALNFERIYGTTVSAEEVARALADHFRTQEFEAQVYRSSENRTVMQA
Ga0190267_111177551	3300019767	Soil	MAEEQGRGAGSGRPALNFERIYGTTVSADEVAQALADHFRTQ
Ga0193704_10021006	3300019867	Soil	MADEQSRGTGALNFERIYSTTVPAEEVARALADHFRMQDFEAQVYRSNENRTVMQARKESLWRQLLG
Ga0193704_10233081	3300019867	Soil	MAEEQSSGSAGRPALNIERIYSTTVPAEELARTLADHFRAQEFEAQVYRTSGDRTVMQ
Ga0193704_10984861	3300019867	Soil	MTEVQGRSTGALNIERIYQTTVPADELAKTLADHFRAQEFEAQVYSTSGDRTVM
Ga0193705_10032285	3300019869	Soil	MADEQSRGTGALNFERIYSTTVPAEEVARALADHFRMQDFEAQVYRSNENR
Ga0193700_10038761	3300019873	Soil	MAEMQGRGTGAGRPALNIERIYSTTVSAEELARALADHFRAQEFEAQVYRTSG
Ga0193741_10037696	3300019884	Soil	MTEEQGKGTSAGRPALNIERIYSTTISAEELARTLADHFRAQEFEAQVYRTSGDRTVMQARKESLWRQ
Ga0193697_10321861	3300020005	Soil	MADEQRRGTGALNFERIYSTTVPAEEVARALADHFRMQDFEAQV
Ga0193697_11330092	3300020005	Soil	MAEEQGKGIGAGRPALNIERIYSTTVPAEELARALADHFRAQEFEAQVYRTSGD
Ga0222623_100720401	3300022694	Groundwater Sediment	MAETQGRGTGALNIERIYSTTVPTEELARTLADHFRAQEFE
Ga0222622_111968421	3300022756	Groundwater Sediment	MAEEQGRGTGAGRPALNIERIYSTTVPAEELARTLADHFRAQEFEAQVYRTSGDRTVMQARKESLWRQL
Ga0207689_109199312	3300025942	Miscanthus Rhizosphere	MAEMQGRGTGAGRPVLNIERIYSTTVSAEELARALADHFRAQDFEAQVYRTSGDRTVMQ
Ga0207712_111308972	3300025961	Switchgrass Rhizosphere	MAEMQGRGTGAGRPVLNIERIYSTTVSAEELARALADHFRAQDFEAQVYRTSGDRTVMQARKESLW
Ga0207428_100439024	3300027907	Populus Rhizosphere	MTEQARGTGASRPALNFERIYGTTVSADEVARALADHFRAQEFEVQVYLSNENRTVMQAR
Ga0307321_10091203	3300028704	Soil	MAEEQSSGSAGRPALNIERIYSTTVPAEELARTLADHFRAQEFEAQVYRTSGD
Ga0307276_101948051	3300028705	Soil	MADEQGRGTGALNFERIYSTTVPAEVVARALADHF
Ga0307295_100013101	3300028708	Soil	MADAQGGGTTTGRPALNFERIYGTTVSAEEVARALADHFR
Ga0307295_100014665	3300028708	Soil	MADGQGRGTGALNFERIYSTTVPAEEVARALADHFRMQEFEAQVYRSNENRTVMQARK
Ga0307295_101173451	3300028708	Soil	MAEMQGKGTGAGRPALNIERIYSTTVPAEELARTLADHFRAQEFE
Ga0307322_100828952	3300028710	Soil	MADEQRRGTGALNFERIYSTTVPAEEVARALADHFRMQDFEAQVYRSNENRTVMQARKES
Ga0307285_101518732	3300028712	Soil	MAEEQGTGSAGRPALNIERIYSTTVPAEELARTLADHFRAQEFEAQVYRTSGDRTVMQARKES
Ga0307311_100015261	3300028716	Soil	MADEQSRGTGALNFERIYSTTVPAEEVARALADHFRMQDFEAQVYRSNENRTVMQAR
Ga0307311_100382033	3300028716	Soil	MADEQGRGTGAGRPALNFERIYGTTVAAEEVARALADHFRTQEFEV
Ga0307315_101048031	3300028721	Soil	MADEQGRGTGGGRPALNFERIYGTTVPAEEVARALADHFRMQEFEVQVYRSSENRTVMQARKESLWR
Ga0307319_100134451	3300028722	Soil	MAEEQGRGVGAGRPALNIERIYSTTVPADELARTLADHFRAQEFEAQVYRTSENRTV
Ga0307319_102796231	3300028722	Soil	MAAEQGNGTGAGRVPALNFERIYRTTVPAEELAGALADHFHAHEFEAQ
Ga0307318_100214633	3300028744	Soil	MTEQQSSSTRASRPALNIERIYSTTVPAEELARTLADHFRAQEF
Ga0307318_100793712	3300028744	Soil	MAEEQGTGTPSSRPALNFERIYGTTVSAEDVARALADHFRGQEFEAQVYRSHENRTVMQA
Ga0307318_100903071	3300028744	Soil	MADEQGRGTGPGRPALNFERIYGTTVAAEEVARALADHFRMQEFEVQVYRSSENRTVMQARKESLWRQLLGVT
Ga0307318_103385361	3300028744	Soil	MTEMQRRGTGALNIERIYSTTVPAEELARTLADHFRGQEFETQVYRTSENRTVMQARKE
Ga0307297_102901691	3300028754	Soil	MADEQGRGTGAGRPALNFERIYGTTVAAEEVARALADHFRTHLA
Ga0307316_100312641	3300028755	Soil	MADGQGRGTGALNFERIYSTTVPAEEVARALADHFRMQ
Ga0307320_100616783	3300028771	Soil	MAAEQGNGTGAGRVPALNFERIYRTTVPAEELAQALADHFHAREFEAQ
Ga0307320_103499941	3300028771	Soil	MAEEQGRGTGAGRPALNIERIYSTTVPAEELARTLADH
Ga0307323_102269271	3300028787	Soil	MADEQRRGTGALNFERIYSTTVPAEEVARALADHFRMQDFE
Ga0307299_101370141	3300028793	Soil	MAEEQGTGSAGRPALNIERIYSTTVPAEELARTLADHFRAQEFEAQVYRTSGDRTVMQA
Ga0307287_102263901	3300028796	Soil	MAEEQGRGTGAGRPALNIERIYSTTVPAEELARTLAD
Ga0307305_104176721	3300028807	Soil	MAEEQGKGIGAGRPALNIERIYSTTVPAEELARTLADHFRAQEFEAQVYRTSGDRTVMQARKESLWR
Ga0307294_102601972	3300028810	Soil	MADGQGRGTGALNFERIYSTTVPAEEVARALADHFRMQEFEAQVYRSNENRTVM
Ga0307302_101496171	3300028814	Soil	MAETQGRGTGALNIERIYSTTVPTEELARTLADHFRAQEFETQVYRTSENRTVMQARKESLWRQLLGV
Ga0307302_103799321	3300028814	Soil	MAEEQGSGSGAGRPALNIERIYSTTVSAEELARTLADHFRAQEFEAQVYRTSGDRTVMQARKESMWRQL
Ga0307296_102490381	3300028819	Soil	MADEQGRGTGAGRPALNFERIYGTTVAAEEVARALADHFRMQE
Ga0307296_104869991	3300028819	Soil	MAEEQGRATGAGRSALNIERIYSTTVTAEEIARALADHFRAQEFEAQVYRTSENRTVMQARKESLWRQLLGVT
Ga0307310_100008371	3300028824	Soil	MADGQGRGTGALNFERIYSTTVPAEEVARALADHFRMQEFEAQVYRSNENRTVMQARKESLWRQLLGVAYAL
Ga0307312_100278276	3300028828	Soil	MAEMQGRGTGAGRPALNIERIYSTTVSAEELARALADHFRAQEFEAQVYRTSGDRTVMQA
Ga0307312_100660963	3300028828	Soil	MADAQGGGTTTGRPALNFERIYGTTVSAEEVARALADHFRTQEFEAQV
Ga0307314_100106932	3300028872	Soil	MADEQRRGTGALNFERIYSTTVPAEVVARALADHFRMQEFEAQVY
Ga0307286_100020937	3300028876	Soil	MADEQRRGTGALNFERIYSTTVPAEEVARALADHFRMQ
Ga0308189_104733612	3300031058	Soil	MADTQGGGTTTGRPALNFERIYGTTVSAEDVARALADHFRTQEFEAQVY
Ga0308201_100078111	3300031091	Soil	MAEEQGTGSAGRPALNIERIYSTTVPAEELARTLADHFRAQEFEAQVYRTSGDRTVMQ
Ga0308187_100080092	3300031114	Soil	MADEQRRGTGALNFERIYSTTVPAEEVARALADHFRMQDFEAQVYR
Ga0307408_1010665951	3300031548	Rhizosphere	MTEVQGRSTGALNIERIYQTTVPADELAKTLADHFRAQEFEAQVYSTS
Ga0307408_1018519751	3300031548	Rhizosphere	MEWLGATAEGAEMAEEQGRGAGAGRPALNFERIYGTTVSADEVAQALADHFRMQEFEAQVYRSNENRTV
Ga0307405_119766521	3300031731	Rhizosphere	MAEEQGRGAGAGRPALNFERIYGTTVSADEVAQALADHFRTQEFEVQVYRSSENRTVMQARKE
Ga0307468_1024588281	3300031740	Hardwood Forest Soil	MGAAQGGGTGASPVPALNIERIYSTTVPAEELAQALADHFR
Ga0307413_102353403	3300031824	Rhizosphere	MADGQSRGASAGGAALNFERIYSTTVSADEVAKALADHFRMQEFEAQVYRS
Ga0307406_116167311	3300031901	Rhizosphere	MAEEQGRATGAGRAALNIERIYRTTVPAEEIARALADHFRAQEFEVQVYRTSGDRTVMQARKESLWR
Ga0307412_106797952	3300031911	Rhizosphere	MADGQSRGASAGGAALNFERIYSTTVSADEVAKALADHFRMQEFEAQVYRSSENRTVMQARK
Ga0307412_111836682	3300031911	Rhizosphere	MTEVQGRGTGALNIERIYQTTVPADELAKTLADHFRAQEF
Ga0307412_121568521	3300031911	Rhizosphere	MTEMQGRGTGALNIERIYSTTVSAEELARTLADHFRPQEFEAQVYRTSENRTVMQARKKS
Ga0307409_1003440581	3300031995	Rhizosphere	MTEVQGGGTAASRPALNYERIYGTTVSAEEVARALADHFRTQEFEAQVYSTHENRTVMQARKESLWRQ
Ga0307409_1004340121	3300031995	Rhizosphere	MADEQGSGRGAGRPALNIERIYITAVPAEELARTLADHFRAQEFEAQ
Ga0307409_1004608291	3300031995	Rhizosphere	MTQQQGSGAAAGRPALNIERIYQTTVTAEELAQALANHFRAQEFEAQVYRTSGERTVMQARKES
Ga0307409_1009084371	3300031995	Rhizosphere	MTEVQGRSTGALNIERIYQTTVPADELAKTLADHFRAQEFEAQVYRTSGDRTVMQAR
Ga0307409_1015057411	3300031995	Rhizosphere	MTEMQGRGTGALNIERIYSTTVSAEELARTLADHFRPQEFEAQVYRTSENRTVMQARKKSLWLRDSS
Ga0307416_1015496672	3300032002	Rhizosphere	MAEEQGRGAGAGRPALNFERIYGTTVSADEVAQALADHFRTQEFEVQVYRSSENRTVMQARKESLWRQLLGVTY
Ga0307414_109607321	3300032004	Rhizosphere	MTEQQGRSTGALNIERIYQTTVPADELAKTLADHFRAQEFEAQVYRTSGDRTVM
Ga0307411_105023413	3300032005	Rhizosphere	MDGTEASVEGTEMTEVQARGTGALNIERIYSTTVPAEELAQALADHFRAQEFEAQVYRTS
Ga0307411_117293272	3300032005	Rhizosphere	MADGQSRGASAGGAALNFERIYSTTVSADEVAKALADHFRMQEFEAQVYRSSENRT
Ga0307411_117860851	3300032005	Rhizosphere	MAEEQGRGAGAGRPALNFERIYGTTVSADEVAQALADHFRTQEFEAQVYRS
Ga0307415_1009392592	3300032126	Rhizosphere	MTQQQGSGAAAGRPALNIERIYQTTVTAEELAQAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047162

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences