Metagenome Family F046902

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F046902
Family Type	Metagenome
Number of Sequences	150
Average Sequence Length	50 residues
Representative Sequence	MNEDTPETVLGPVEERTAPLNVAGAVPQIVADDVTDDLKILLGEFEGPLDLL
Number of Associated Samples	115
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.00 %
% of genes near scaffold ends (potentially truncated)	99.33 %
% of genes from short scaffolds (< 2000 bps)	95.33 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (74.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.333 % of family members)
Environment Ontology (ENVO)	Unclassified (46.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 25.00% Coil/Unstructured: 75.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF00579	tRNA-synt_1b	84.67
PF02163	Peptidase_M50	8.67
PF09821	AAA_assoc_C	0.67
PF00749	tRNA-synt_1c	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG0162	Tyrosyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	84.67
COG0180	Tryptophanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	84.67
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.00 %
Unclassified	root	N/A	26.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.00 %
Unclassified	root	N/A	26.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.00 %
Unclassified	root	N/A	26.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.67 %
Unclassified	root	N/A	26.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.33 %

Name	Rank	Taxonomy	Distribution
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	28.67 %
Unclassified	root	N/A	26.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.33 %

Name	Rank	Taxonomy	Distribution
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	28.67 %
Unclassified	root	N/A	26.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.33 %

Name	Rank	Taxonomy	Distribution
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	28.67 %
Unclassified	root	N/A	26.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.00 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	23.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.33 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	5.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.00 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	23.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.33 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	5.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.33 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0800307	All Organisms → cellular organisms → Bacteria → Proteobacteria	4328	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10669027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	537	Open in IMG/M
3300000559\|F14TC_100496193	All Organisms → cellular organisms → Bacteria	3086	Open in IMG/M
3300000953\|JGI11615J12901_10227431	Not Available	864	Open in IMG/M
3300000956\|JGI10216J12902_104624916	Not Available	1021	Open in IMG/M
3300000956\|JGI10216J12902_105742696	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300003993\|Ga0055468_10040373	Not Available	1143	Open in IMG/M
3300004156\|Ga0062589_100491494	Not Available	1031	Open in IMG/M
3300004156\|Ga0062589_101300358	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300004157\|Ga0062590_101734464	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300004157\|Ga0062590_102403301	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300004479\|Ga0062595_100905494	All Organisms → cellular organisms → Bacteria → Proteobacteria	744	Open in IMG/M
3300004480\|Ga0062592_100563620	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300004480\|Ga0062592_102550480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	515	Open in IMG/M
3300004643\|Ga0062591_102593607	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300005093\|Ga0062594_100300940	All Organisms → cellular organisms → Bacteria → Acidobacteria	1220	Open in IMG/M
3300005093\|Ga0062594_103112018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	519	Open in IMG/M
3300005184\|Ga0066671_10259467	Not Available	1074	Open in IMG/M
3300005280\|Ga0065696_1279314	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300005293\|Ga0065715_10134371	All Organisms → cellular organisms → Bacteria	1956	Open in IMG/M
3300005293\|Ga0065715_10830213	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300005294\|Ga0065705_10829553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300005294\|Ga0065705_10845375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	594	Open in IMG/M
3300005294\|Ga0065705_11084550	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	526	Open in IMG/M
3300005295\|Ga0065707_10478368	All Organisms → cellular organisms → Bacteria → Proteobacteria	736	Open in IMG/M
3300005295\|Ga0065707_10627894	Not Available	675	Open in IMG/M
3300005334\|Ga0068869_100775646	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300005344\|Ga0070661_101693017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	536	Open in IMG/M
3300005345\|Ga0070692_10455215	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300005345\|Ga0070692_10798669	Not Available	644	Open in IMG/M
3300005345\|Ga0070692_11101309	Not Available	561	Open in IMG/M
3300005354\|Ga0070675_101251185	Not Available	683	Open in IMG/M
3300005364\|Ga0070673_100436839	Not Available	1176	Open in IMG/M
3300005364\|Ga0070673_101748929	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005440\|Ga0070705_100218961	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300005457\|Ga0070662_100332060	Not Available	1242	Open in IMG/M
3300005468\|Ga0070707_100507227	Not Available	1168	Open in IMG/M
3300005545\|Ga0070695_101577237	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300005547\|Ga0070693_101659269	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005549\|Ga0070704_100946491	Not Available	777	Open in IMG/M
3300005549\|Ga0070704_102061995	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300005564\|Ga0070664_100577666	Not Available	1041	Open in IMG/M
3300005577\|Ga0068857_101187543	Not Available	738	Open in IMG/M
3300005577\|Ga0068857_101335337	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300005578\|Ga0068854_101475137	All Organisms → cellular organisms → Bacteria → Proteobacteria	617	Open in IMG/M
3300005578\|Ga0068854_102141405	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005618\|Ga0068864_101008912	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300005618\|Ga0068864_101984488	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005618\|Ga0068864_102312542	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	544	Open in IMG/M
3300005719\|Ga0068861_100844479	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300005840\|Ga0068870_10646655	Not Available	724	Open in IMG/M
3300005841\|Ga0068863_100710077	All Organisms → cellular organisms → Bacteria → Proteobacteria	1000	Open in IMG/M
3300005841\|Ga0068863_102293532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	549	Open in IMG/M
3300005843\|Ga0068860_100218026	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300005883\|Ga0075299_1019081	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300006804\|Ga0079221_10773603	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300006806\|Ga0079220_11337625	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300006845\|Ga0075421_102617888	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	523	Open in IMG/M
3300006854\|Ga0075425_100953985	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300006880\|Ga0075429_100230470	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300006880\|Ga0075429_100764202	Not Available	846	Open in IMG/M
3300006894\|Ga0079215_10662683	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	696	Open in IMG/M
3300006894\|Ga0079215_11581783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	520	Open in IMG/M
3300006904\|Ga0075424_101276159	Not Available	781	Open in IMG/M
3300006904\|Ga0075424_101296177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	775	Open in IMG/M
3300007004\|Ga0079218_10523789	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300009098\|Ga0105245_10888351	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300009100\|Ga0075418_10213408	All Organisms → cellular organisms → Bacteria	2055	Open in IMG/M
3300009100\|Ga0075418_11853120	Not Available	656	Open in IMG/M
3300009101\|Ga0105247_11033696	Not Available	644	Open in IMG/M
3300009101\|Ga0105247_11536707	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	544	Open in IMG/M
3300009147\|Ga0114129_11479517	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300009147\|Ga0114129_11485276	Not Available	833	Open in IMG/M
3300009156\|Ga0111538_10348284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1875	Open in IMG/M
3300009156\|Ga0111538_13204958	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	570	Open in IMG/M
3300009156\|Ga0111538_13679308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	531	Open in IMG/M
3300009174\|Ga0105241_12045193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300009553\|Ga0105249_12888026	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	551	Open in IMG/M
3300009789\|Ga0126307_10691362	Not Available	823	Open in IMG/M
3300010036\|Ga0126305_10578272	Not Available	754	Open in IMG/M
3300010040\|Ga0126308_11382235	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	500	Open in IMG/M
3300010044\|Ga0126310_11402889	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	569	Open in IMG/M
3300010045\|Ga0126311_11518143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	562	Open in IMG/M
3300010045\|Ga0126311_11929554	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	502	Open in IMG/M
3300010047\|Ga0126382_11621618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300010362\|Ga0126377_11150523	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300010375\|Ga0105239_12800787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300010397\|Ga0134124_10641558	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300010397\|Ga0134124_11475399	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300010397\|Ga0134124_11639932	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300010399\|Ga0134127_10049432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3474	Open in IMG/M
3300010399\|Ga0134127_12736574	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	573	Open in IMG/M
3300010400\|Ga0134122_11169549	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300010400\|Ga0134122_12762781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	543	Open in IMG/M
3300010401\|Ga0134121_12454646	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	563	Open in IMG/M
3300010403\|Ga0134123_13574241	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	504	Open in IMG/M
3300011119\|Ga0105246_11822052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	582	Open in IMG/M
3300012189\|Ga0137388_10376718	Not Available	1312	Open in IMG/M
3300012198\|Ga0137364_10246681	Not Available	1319	Open in IMG/M
3300012200\|Ga0137382_10345069	Not Available	1044	Open in IMG/M
3300012357\|Ga0137384_10943434	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300012582\|Ga0137358_10582645	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300012923\|Ga0137359_10612054	Not Available	955	Open in IMG/M
3300012948\|Ga0126375_10876628	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300012957\|Ga0164303_10746451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300013306\|Ga0163162_10218239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2037	Open in IMG/M
3300013307\|Ga0157372_13363195	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	509	Open in IMG/M
3300013308\|Ga0157375_13511206	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	522	Open in IMG/M
3300014325\|Ga0163163_11939589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300014326\|Ga0157380_10096049	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2456	Open in IMG/M
3300014745\|Ga0157377_10719329	Not Available	727	Open in IMG/M
3300014968\|Ga0157379_10187268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1870	Open in IMG/M
3300015077\|Ga0173483_10509510	Not Available	643	Open in IMG/M
3300015373\|Ga0132257_102610973	Not Available	657	Open in IMG/M
3300018422\|Ga0190265_10107571	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2632	Open in IMG/M
3300018422\|Ga0190265_12205996	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300018469\|Ga0190270_12886047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	543	Open in IMG/M
3300019789\|Ga0137408_1333087	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300022892\|Ga0247753_1050365	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	535	Open in IMG/M
3300025728\|Ga0207655_1229573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	536	Open in IMG/M
3300025900\|Ga0207710_10490089	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300025907\|Ga0207645_10685260	Not Available	696	Open in IMG/M
3300025920\|Ga0207649_11239876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	590	Open in IMG/M
3300025922\|Ga0207646_10428470	Not Available	1194	Open in IMG/M
3300025923\|Ga0207681_10243261	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300025923\|Ga0207681_11820866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	508	Open in IMG/M
3300025925\|Ga0207650_10313033	Not Available	1284	Open in IMG/M
3300025927\|Ga0207687_11145954	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300025939\|Ga0207665_11219308	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300025942\|Ga0207689_10140075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1992	Open in IMG/M
3300025942\|Ga0207689_11285980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300025981\|Ga0207640_11447659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	616	Open in IMG/M
3300026035\|Ga0207703_10473384	Not Available	1173	Open in IMG/M
3300026088\|Ga0207641_10614790	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300026088\|Ga0207641_11379890	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300026095\|Ga0207676_11635692	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	642	Open in IMG/M
3300026121\|Ga0207683_11328306	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300026142\|Ga0207698_10873681	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300027886\|Ga0209486_10496935	Not Available	757	Open in IMG/M
3300027909\|Ga0209382_11204863	Not Available	774	Open in IMG/M
3300028138\|Ga0247684_1062009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	609	Open in IMG/M
3300028380\|Ga0268265_10585746	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300028381\|Ga0268264_12322519	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	543	Open in IMG/M
3300031548\|Ga0307408_101723532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300031943\|Ga0310885_10385630	Not Available	743	Open in IMG/M
3300031944\|Ga0310884_10085411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1511	Open in IMG/M
3300032002\|Ga0307416_100399026	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300032017\|Ga0310899_10273301	Not Available	775	Open in IMG/M
3300032205\|Ga0307472_101935889	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	589	Open in IMG/M
3300033412\|Ga0310810_10926160	Not Available	760	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.00%
Host-Associated	Host-Associated	48.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.33%
Plants	Host-Associated → Plants	48.00%
Aquatic	Environmental → Aquatic	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.33%
Marine	Environmental → Aquatic → Marine	0.67%
Roots	Host-Associated → Plants → Roots	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.00%
Loam	Environmental → Terrestrial → Soil → Loam	8.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.67%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.67%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.33%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.67%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.67%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.00%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.00%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.33%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.67%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.67%
Switchgrass Rhizosphere Bulk Soil	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.67%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005280	Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005883	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300025728	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_08003071	3300000033	Soil	MSDETPDVVVESTEQAPVPLNVAGAIPQIVSDDTTDDLKVLLGEFEGPLDLLLHLIRQEX
ICChiseqgaiiFebDRAFT_106690272	3300000363	Soil	MNDQTPETITETVEEQPAQLNVAGATPHIVPDDVTDDLKIL
F14TC_1004961931	3300000559	Soil	MIDDAPDTPTELVEIPSTPLKVAGAVPQIVSDDVTDDLKILLGEFEGPLDLLLHLIRQEQVSIY
JGI11615J12901_102274312	3300000953	Soil	MDEKIPETAEEHVAPLNVAGAVPHIVPDDDTDDLKILLGEFEGPLDLLLHL
JGI10216J12902_1046249162	3300000956	Soil	MNEETPETGVETVDERPAQLNVAGASPHIVEDDTTDDLKILLGEFEGPLD
JGI10216J12902_1057426961	3300000956	Soil	MNEETPETVVETIDERPAQLNVAGAAPHIVEDDATDDLKILLGEFEGPLD
Ga0055468_100403731	3300003993	Natural And Restored Wetlands	MDEDTPETPVETVETRLAPLNVAGATPQIAPDDVTDELNIT
Ga0062589_1004914942	3300004156	Soil	MDENTPEVTEERTAPLKVAGAVPHIVSDDQTDDLKILLGE
Ga0062589_1013003582	3300004156	Soil	MDDNKTDLVEERAPLNVAGAVPQIVSDDTTDDLKILLGEFEGPLDLLLHLIRQEHVSIY
Ga0062590_1017344642	3300004157	Soil	MDDETPETLPQKVEQAATQLNVAGAMPRIVEDDVTDDLKILLGEFEGPLDLLLHLIRQE
Ga0062590_1024033012	3300004157	Soil	MNEETLETSVEAREESTPQSVASGAEPEVAAAAQLNVAGAMPQIVPDDVTDDLKILLGEFEGPLDLLLHLIRQEHVSIY
Ga0062595_1009054941	3300004479	Soil	MSEETPDISEERAPLNVAGAVPQIVSDDTTDDLKILLGEFEGPLDLLLHLI
Ga0062592_1005636201	3300004480	Soil	MDEETTKAAVKTVAERTTPLNVAGAMPHIVSDDVTDDLKILLGEFEGPLDLLLH
Ga0062592_1025504801	3300004480	Soil	VTDDNTPETAVETAEERAPLNVAGAMPRIVSDDTTDDLKILLGEFEGPLDL
Ga0062591_1025936071	3300004643	Soil	MDDNTPEISEERAPLNVAGAVPQIVADDVTDDLKILLGEFEGPLDLLLHLIRQE
Ga0062594_1003009401	3300005093	Soil	MNEETPETVLQPAEERATPLNVAGAMPQIVTDDVTDDLKILLGEFEGPL
Ga0062594_1031120181	3300005093	Soil	MNDDTPEAAALERVEERTAPLNVAGAVPHIVADDVTDDLKILLGEFEGPLDLLLH
Ga0066671_102594671	3300005184	Soil	MDEETSEVRATPLKVAGAVPQIVADDTTDDLKILLGEFEG
Ga0065696_12793142	3300005280	Switchgrass Rhizosphere Bulk Soil	MNEETPEVVETIEERQAPLNVAGATPHIISDDVTDDLKILLGEFEGPLDLLLHLI
Ga0065715_101343711	3300005293	Miscanthus Rhizosphere	MDETPETSTELAEAQTTPLKVAGAVPQIVPDDVTDELKILLGEFEGPLDLL
Ga0065715_108302132	3300005293	Miscanthus Rhizosphere	MDDNNPDVVEERAPLNVAGAVPHIVAGDNTDDLKILLGEFEGPLDLLLHLIRQEHVSIYD
Ga0065705_108295532	3300005294	Switchgrass Rhizosphere	MSEDTPEAALETVAERSGPLNVARAVPHIVSDDVTDDLKILLGEFEGP
Ga0065705_108453751	3300005294	Switchgrass Rhizosphere	MTMDETPETSKKSVEGQTTPLNVAGAVPQIVSDDLTDDLKILLGEFEGPLD
Ga0065705_110845502	3300005294	Switchgrass Rhizosphere	MDEETSKAEPTAPLNVAGAVPHIVADDNTDDLKILLGEFEGPLDL
Ga0065707_104783681	3300005295	Switchgrass Rhizosphere	MDENNPQETSEDRAAPLKVAGAVPQIVTDDDTDDLKILLGEFEGPLDLLLHLIRQ
Ga0065707_106278941	3300005295	Switchgrass Rhizosphere	MNEDTPEAPLEERTVPLNVAGAVPQIVSDDVTDDLKILLGEFEGPL
Ga0068869_1007756462	3300005334	Miscanthus Rhizosphere	MSDETPEVAIEATEQASVPLNVAGAVPQIVSDDTTDDLKVLLGEFEGPLD
Ga0070661_1016930171	3300005344	Corn Rhizosphere	MVTADDTDLMDDNNPDVVEERAPLNVAGAVPHIVSDDNTDDLK
Ga0070692_104552151	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MDEETPKAEPAAQLNVAGAVPHIVSDDNTDDLKILLGEFEGPLDLL
Ga0070692_107986692	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MNEDTPDTIEERPTLLNVAGAVPQIVPDDLTDDLKIHLGEFDGPL
Ga0070692_111013092	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MNEETPETVLQPAEERATPLNVAGAMPQIVTDDVTDDLKIL
Ga0070675_1012511852	3300005354	Miscanthus Rhizosphere	MNDNIPEAVETAEERTSLNVAGAVPQIVSDDTTDDLKILLGEFEGPLD
Ga0070673_1004368392	3300005364	Switchgrass Rhizosphere	MDENNPQAALEISEERAAPLNVAGAIPQIVPDDDTDDLKILLGEFEGPLDL
Ga0070673_1017489292	3300005364	Switchgrass Rhizosphere	MSDNTPETAIEAAEERTPLNVAGAVPQIVSDDTTDDLKILLGEFEGPLDLLLHLIRQE
Ga0070705_1002189611	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDEETTKLEPGVPLNVAGAIPQIVRDDNTDDLKILLGEFEGPLDLLLHLIRQEHVSIYDI
Ga0070662_1003320601	3300005457	Corn Rhizosphere	MDETPETSTELAEAQTTPLNVAGAIPQIVPDDVTDELKILLGEFEGPL
Ga0070707_1005072272	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LTEENTPETVVDAAAERPAPLNVAGAVPQIVADDNTDDLKILLG
Ga0070695_1015772372	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LDEEIQKTAVKTSETPLKVAGAVPRIVSDDVTDDLKILLGEFEGPLDLLLHLIRQEQVSI
Ga0070693_1016592691	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VDEETVAAPKEATTGTAEPTVTQLNVAGAVPRIVPDDVTDDLKILLGEFEGPLDLLLHLIRQEQVSIYD
Ga0070704_1009464911	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MNEETPETIVETVDGQPAPLNVAGATPHIVSDDLTDDLKILLGEFEGP
Ga0070704_1020619951	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MNEETPETVIETRDEVVTPLKVAGASPQIVADDVTDDLKILLGEFEGPLDLLLHLIRQEH
Ga0070664_1005776661	3300005564	Corn Rhizosphere	MDEETSKAEPTGPLNVAGAIPQIVSDDNTDDLKILLGEFEGPLDL
Ga0068857_1011875432	3300005577	Corn Rhizosphere	MDENNPQTPLNVAGAVPQIVSDDDTDDLKILLGEFE
Ga0068857_1013353372	3300005577	Corn Rhizosphere	MDEDTPIEQPVAPLNVAGAVPRIVSDDTTDDLKILLGEFEGPLDLLL
Ga0068854_1014751371	3300005578	Corn Rhizosphere	MSEEAPELIAETREETVTPLNVAGAVPQIVPDDATDDLKILLGEFEGPLDLLLHLIRQEQVSI
Ga0068854_1021414052	3300005578	Corn Rhizosphere	MDETPETSTELAEAQTTPLNVAGAIPQIVPDDVTDELKILLGEFEGPLDLLLHLIRQ
Ga0068864_1010089121	3300005618	Switchgrass Rhizosphere	LKDDFLSETGEERAPLNVAGAVPHIVSDDNTDDLKILLGEFEGPLDLL
Ga0068864_1019844881	3300005618	Switchgrass Rhizosphere	MDENTPEDGEERVVLLNVAGAVPHIVADDNTDDLKILLGEFEGPLDLLLHLIRQE
Ga0068864_1023125422	3300005618	Switchgrass Rhizosphere	MNEETPERVVETIEEQSAPLNVAGATPQIVADDVTDDLKILLGEFEGPLD
Ga0068861_1008444791	3300005719	Switchgrass Rhizosphere	MDEDTPIEQPMAPLNVAGAVPRIVSDDNTDDLKILLGEFEGPLDL
Ga0068870_106466552	3300005840	Miscanthus Rhizosphere	MDENNPQETSEDRAAPLNVAGAVPQIVADDESDDLKILLGE
Ga0068863_1007100772	3300005841	Switchgrass Rhizosphere	MNDDTPEAAALERVEERTAPLNVAGAVPHIVADDVTDDLKILLGEFEGPLDLLLHLIRQEHVSIYD
Ga0068863_1022935322	3300005841	Switchgrass Rhizosphere	MDENTPEVTEERTAPLKVAGAVPHIVSDDQTDDLKILLGEF
Ga0068860_1002180261	3300005843	Switchgrass Rhizosphere	MDENRPEVTEERTAPLKVAGAVPHIVSDDQTDDLKILLGEFEGPLDLLLHLIRQEHV
Ga0075299_10190812	3300005883	Rice Paddy Soil	LIDDTNPDLVEGRAPLNVAGAVPQIVSDDTTDDLKILLGEFEGPLDLLLHLIRQEHVSIY
Ga0079221_107736032	3300006804	Agricultural Soil	MSEEAPELIVETREETVTPLNVAGAVPQIVSDEVTDDLKILLGEFEGPL
Ga0079220_113376252	3300006806	Agricultural Soil	MSEETPDTSEERPPLNVAGAVPQIVTDDTTDDLKILL
Ga0075421_1026178882	3300006845	Populus Rhizosphere	MDEETPDERPAPLNVAGASPHIVSDDVTDDLKILLGDF
Ga0075425_1009539851	3300006854	Populus Rhizosphere	VELIVDEEIQESAVETSEAPLKVAGAVPRIVSDEITDDLKILLGEFEGPLDLLL
Ga0075429_1002304703	3300006880	Populus Rhizosphere	VDDETPDIALETTEPAAAQINVAGAVPRIVSDDVTDDLKILLGEFEGPLDLLLHLI
Ga0075429_1007642022	3300006880	Populus Rhizosphere	MNEDTPETVLGPVEERTAPLNVAGAVPQIVADDVTDDLKILLGEFEGPLDLL
Ga0079215_106626832	3300006894	Agricultural Soil	MNEESPETVLETREESTTSLNVAGAMPQIVADDVTDDLKILLGEFEGPLDLLLHLIRQEHVS
Ga0079215_115817832	3300006894	Agricultural Soil	MTENTPEATVEAREEATTPLNVAGAMPQIVSDDVTDDLKILLG
Ga0075424_1012761592	3300006904	Populus Rhizosphere	MSEEAPELIAEKREESATPLNVAGAVPQIVTDDVTDDLKILLGEFEGPL
Ga0075424_1012961771	3300006904	Populus Rhizosphere	VDEEIQKTAVKTSETPLKVAGAVPRIVSDDVTDDLKILLGEFEGPLDLLLHLIRQEQVSI
Ga0079218_105237892	3300007004	Agricultural Soil	MNEETPETVLETVEERTAPLKVAGAVPQIVSDDVTDDLTILLGEFEGPLDLLLHLIRQEHVSIYD
Ga0105245_108883511	3300009098	Miscanthus Rhizosphere	MDENKQLEISEERSAPLNVAGAVPQIVPDDDTDDLKILLGEFEGPLD
Ga0075418_102134081	3300009100	Populus Rhizosphere	MNEDTPETVLGPVEERTAPLNVAGAVPQIVADDVTDDLKILLGEFEGP
Ga0075418_118531202	3300009100	Populus Rhizosphere	MNEETPETVVETVEGQSAPLNVAGATPQIVSDDNTDDL
Ga0105247_110336961	3300009101	Switchgrass Rhizosphere	MNEETPETIVETVDGQTAPLNVAGATPHIVSDDLTDDLKILLGEFEGPLDLLL
Ga0105247_115367071	3300009101	Switchgrass Rhizosphere	MSEETPDISEERAPLNVAGAVPQIVADDTTDDLKILLGEFEGPLDLLLHLIRQEHVSIYD
Ga0114129_114795172	3300009147	Populus Rhizosphere	MDEETSKAEPAAQLNVAGAVPHIVADDNTDDLKILLGEFEGPLDLLLHLIRQEHVSI
Ga0114129_114852762	3300009147	Populus Rhizosphere	MTMDETPKTSTESAEGQTTPLNVAGAVPQIVSDDLTDDLKILLGEFEGPLDLLLH
Ga0111538_103482841	3300009156	Populus Rhizosphere	MTMDETPKTSTESAEGQTTPLNVAGAVPQIVSDDLTDDLKILLGEFEG
Ga0111538_132049582	3300009156	Populus Rhizosphere	MDDVPESTGVEPAEQPNATLNVAGAVLRLAPDDITDDIKIFLGEFEGPLDLLL
Ga0111538_136793081	3300009156	Populus Rhizosphere	MNDDTPEVAALERVEERTAPLNVAGAVPHIVADDVTDDLKILLGEF
Ga0105241_120451931	3300009174	Corn Rhizosphere	MDENNPQAQLNVAGAVPQIVSDDDTDDLKILFGEF
Ga0105249_128880262	3300009553	Switchgrass Rhizosphere	VTEDITPEIAVETTEARAPLNVAGAIPHIVSDDTTDDLKILLGEFEGPL
Ga0126307_106913622	3300009789	Serpentine Soil	LIDDNNPDTVEERATLNVAGAMPHIVADDTTDDLKILLGEFEGPLDLLLHLIR
Ga0126305_105782721	3300010036	Serpentine Soil	LKKNEDTTEPSAKVVETRTAQLNVAGAVPQIVSDDLTDDLKILLGEFEGPLD
Ga0126308_113822351	3300010040	Serpentine Soil	MDEDTLEPRTALLNVAGATPQIVSDDVTDDLKIVLGEF
Ga0126310_114028892	3300010044	Serpentine Soil	MNEDTPKTTLETVEQRTAPLNVAGAVPHITANDVTDDLTIRLGEFEGPL
Ga0126311_115181431	3300010045	Serpentine Soil	LTDDNIPETAEERAPLNVAGAVPHIVADDNTDELTIRLG
Ga0126311_119295542	3300010045	Serpentine Soil	VEENTPKARLETMEERTAPLNVAGAVPQIVSDDTTDDLKILLGEFEGPLDLLLHLIRQEHVS
Ga0126382_116216182	3300010047	Tropical Forest Soil	LDEETPKVEPAAPLNVAGAVPQIVPDDNTDDLKILLGEFEGPLDL
Ga0126377_111505231	3300010362	Tropical Forest Soil	MSEDTPEMVTETVEERPTPLKVAGAVPQIVPDDVTDDLKILLGEFEGPLDL
Ga0105239_128007872	3300010375	Corn Rhizosphere	VTDDNTPETAVAEERAPLNVAGAVPQIVSDDTTDDLKILLGEFE
Ga0134124_106415582	3300010397	Terrestrial Soil	MDDNNPQTPLNVAGAVPHIVPDDDSDDLKILLGEFEGPLDLLLHLIRQE
Ga0134124_114753991	3300010397	Terrestrial Soil	MSEETPDDRPVPLNVAGAAPQIVADDVTDDLKILLGEFEGPLDLL
Ga0134124_116399321	3300010397	Terrestrial Soil	MDENNPQAPLNVAGAVPQIVPDDDTDDLKILLGEF
Ga0134127_100494325	3300010399	Terrestrial Soil	MDETPETSKELAEPQTTPLNVAGAIPQIVADDLTDDLKILLGEFE
Ga0134127_127365742	3300010399	Terrestrial Soil	MDENNPQEISEERAAPLNVAGAVPQIVADDDTDDLKILLGEFEGPLDLLLHLIRQEHV
Ga0134122_111695492	3300010400	Terrestrial Soil	MDDNNPDVVEERAPLNVAGAVPHIVSDDNTDDLKILLGEFEGPLDSLLHLIRQEHVSI*
Ga0134122_127627811	3300010400	Terrestrial Soil	MDEETSKVEPTASLNVAGAVPHIVADDNTDDLKILLGEFEGPLDLLLHLIR
Ga0134121_124546462	3300010401	Terrestrial Soil	VDEEIQKTAVETSETPLKVAGAVPRIVADDVTDDLKILLGEFEGPLDLLLHLIR
Ga0134123_135742412	3300010403	Terrestrial Soil	MMSEEAPELIVETQEESVTPLKVAGAMPHIVPDDVTDDLKILLGEFEGPLDLL
Ga0105246_118220522	3300011119	Miscanthus Rhizosphere	MDDNPEISEERTPLNVAGAVPQIVSDDTTDDLKILLGEFEGPLDLLLHLIR
Ga0137388_103767183	3300012189	Vadose Zone Soil	MDDTPETTVEPTDQPSAPLKVAGAMPQIVSDDTTDDLKLLLGEFEGPLDL
Ga0137364_102466811	3300012198	Vadose Zone Soil	MDDTPETTREATDKAPVQLKVAGAVPQIVSDDMTDDLKILLGEFEG
Ga0137382_103450692	3300012200	Vadose Zone Soil	VKMDDTRETATDQVAAPLKVAGAKPHIVSDDVTDDLKILLGEFEGPLDLLLH
Ga0137384_109434341	3300012357	Vadose Zone Soil	MDDSPETTVEPTDQPSAPLKVAGAMPQIVSDDTTDDLKLLLGEFEGPLDLLL
Ga0137358_105826451	3300012582	Vadose Zone Soil	MDETPETALEPTDQPSAPLKVAGAMPQIVSDDTTDDLKILLGEFEGPLDLLLHLIRQ
Ga0137359_106120541	3300012923	Vadose Zone Soil	MDETPETALEPTDQPSAPLKVAGAMPQIVSDDTTDDLKILLGEFEGPLDL
Ga0126375_108766281	3300012948	Tropical Forest Soil	MTDDTPETAMDTVEQSSAPLNVAGATPRIVPDDVTDDLKILLGEFEGPLDLLLHLIRQEQVS
Ga0164303_107464511	3300012957	Soil	MDENNPQEISQDRVGQLKVAGAVPHIVSDDDTDDLKILLGEFEGPLDLLLHLIRQEHVSIYDI
Ga0163162_102182391	3300013306	Switchgrass Rhizosphere	MNEDTPDTVEERPTLLNVAGAVPQIVPDDLTDDLKIHLGEFEGPLDLLLHLI
Ga0157372_133631951	3300013307	Corn Rhizosphere	MNDQTPETAAQPAVEEQPAPLNVAGATPQIVSDDVTDDLKILLGEFEG
Ga0157375_135112061	3300013308	Miscanthus Rhizosphere	MDDNNPDVVEERAPLNVAGAVPHIVAGDNTDDLKILLGDFEGPL
Ga0163163_119395892	3300014325	Switchgrass Rhizosphere	MTMDEETPKLEAVTPLNVAGAVPHIVSDDDTDDLKILLGEFEGPLDLLLHLIRQEHVSI
Ga0157380_100960491	3300014326	Switchgrass Rhizosphere	MDDETPETLPQKVEQAATQLNVAGAMPRIVEDDVTDDLKILLGEFEGPLDLLLHL
Ga0157377_107193291	3300014745	Miscanthus Rhizosphere	VTDDNTPDTAVETAEERAPLNVAGAVPHIVADDNTDDLKILLGEFEGPLDLLLHLIR
Ga0157379_101872681	3300014968	Switchgrass Rhizosphere	MDENTPEVTEERTAPLKVAGAVPHIVSDDQTDDLKILLGEFEGPLDLLLHLIRQEHVS
Ga0173483_105095102	3300015077	Soil	MDDNPEISEERTPLNVAGAVPQIVTDDTTDDLKILLG
Ga0132257_1026109732	3300015373	Arabidopsis Rhizosphere	MDETPESIAAEPAEQTNATLNVAGAVPRLAPDDITDDIKIFLGEFEGPLDL
Ga0190265_101075714	3300018422	Soil	MNEETPETVVEVVEERAAPLKVAGAVPRIVSNDVTDDLTILLGEF
Ga0190265_122059962	3300018422	Soil	MNDQTPETVAEPVEKPAPLNVAGATPQIVSDDVTDDLKIRLGEFEGPLDLLLHLIR
Ga0190270_128860472	3300018469	Soil	VEDESPETVVKQVTQSSTQLNVAGAMPRIVSDDLTDDLKILLGEFEGPLDLLLHLIRQE
Ga0137408_13330871	3300019789	Vadose Zone Soil	MDEIPKAAQERTEQSSTTLSVAGASPEEIVADNLTDDLKIVLGEFEGPLDLLLHL
Ga0247753_10503651	3300022892	Soil	MDENTPEVTEERTAPLKVAGAVPHIVSDDQTDDLKILLGEFEGPLDLLLHLIRQEH
Ga0207655_12295731	3300025728	Miscanthus Rhizosphere	MDETKPQAVVETSEDRAAPLNVAGAVPHIVADDDTDDLKILLGEFEGPLDLLLHLIRQE
Ga0207710_104900891	3300025900	Switchgrass Rhizosphere	MDDNNPQTPLNVAGAVPHIVPDDDSDDLKILLGEFEGPLDL
Ga0207645_106852602	3300025907	Miscanthus Rhizosphere	MDDNPEISEERTPLNVAGAVPQIVTDDTTDDLKILLGEFEGPL
Ga0207649_112398762	3300025920	Corn Rhizosphere	MVTADDTDLMDDNNPDVVEERAPLNVAGAVPHIVSDDNTDDLKILLGEFE
Ga0207646_104284702	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LTEENTPETVVDAAAERPAPLNVAGAVPQIVADDNTDDLKILLGEFEGPLDLLLHLIRQE
Ga0207681_102432613	3300025923	Switchgrass Rhizosphere	MDDETPETLPQKVEQAATQLNVAGAMPRIVEDDVTDDLKILLGEFEGPLDLL
Ga0207681_118208661	3300025923	Switchgrass Rhizosphere	MDETPETSTELAEAQTTPLNVAGAIPQIVPDDVTDELKILLGEF
Ga0207650_103130332	3300025925	Switchgrass Rhizosphere	MNEDTPDTIEERPTLLNVAGAVPQIVPDDLTDDLKIHLGEFEGPLDLLLHLIRQ
Ga0207687_111459541	3300025927	Miscanthus Rhizosphere	MDENKPLEISEERSAPLNVAGAVPQIVPDDDTDDLKILLGEFEGPLD
Ga0207665_112193081	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSEEAPELIAETREESVTPLNVAGAVPQIVSDDTTDDLKILLGEFEGPLDLLLHLIRQEQVSI
Ga0207689_101400751	3300025942	Miscanthus Rhizosphere	MKEDTPDTVEERTTLLNVAGAVPQIVPDDLTDDLKIHLGEFEGPLDLLLHLIRQEQVS
Ga0207689_112859802	3300025942	Miscanthus Rhizosphere	MDENNPPETSEDRAAPLNVAGAIPHIVSDDDTDDLKILLGEFEG
Ga0207640_114476591	3300025981	Corn Rhizosphere	MDEETPIEQPVVPLNVAGAVPRIVSDDNTDDLKILLGEFEGPLDLLL
Ga0207703_104733841	3300026035	Switchgrass Rhizosphere	MDENTPEVTEERTAPLKVAGAVPHIVSDDQTDDLKILLGEFE
Ga0207641_106147903	3300026088	Switchgrass Rhizosphere	VDEDTPETVLETTGQVTAQLNVAGAMPTIVSDDVTDDLKVLLGEFEGPLDLLLH
Ga0207641_113798902	3300026088	Switchgrass Rhizosphere	MSEETPDDRPVLLNVAGAAPQIVPDDVTDDLKILLGE
Ga0207676_116356921	3300026095	Switchgrass Rhizosphere	MSEEAPELIVETREESATPLNVAGAVPQIVTDDVTDDLKILLGEFEGPL
Ga0207683_113283062	3300026121	Miscanthus Rhizosphere	LKDDYLSETGEERAPLNVAGAVPHIVSDDNTDDLKILLGEFE
Ga0207698_108736812	3300026142	Corn Rhizosphere	MNEDTPERVMEAAEERATPLKVAGAVPQIVSDDVTDDLKILLG
Ga0209486_104969352	3300027886	Agricultural Soil	MSEDTPDERPALLKVAGAAPQIVADDVTDDLKILLGEFEGPL
Ga0209382_112048632	3300027909	Populus Rhizosphere	MDEETPDERPAPLNVAGASPHIVSDDVTDDLKILLGDFEGPL
Ga0247684_10620091	3300028138	Soil	MNEEPKSEETTAPLNVAGAVPQIVPDDLTDDLKILLGEFEGPLDLLLHLIRHEH
Ga0268265_105857462	3300028380	Switchgrass Rhizosphere	MDEDTPIEQPVAPLNVAGAVPRIVSDDTTDDLKILLGEFEGPLDLLLHLIRQ
Ga0268264_123225191	3300028381	Switchgrass Rhizosphere	MDENRPEVTEERTAPLKVAGAVPHIVSDDQTDDLKILLGEFEGPLDLLLHLIRQEHVS
Ga0307408_1017235321	3300031548	Rhizosphere	MSEDTPDERPALLNVAGAAPQIVADDVTDDLKILLGEFEGPLDLLL
Ga0310885_103856301	3300031943	Soil	MTMDETPETSKESAEGQTAPLKVAGAVPQIVSDDLTDDLKILLGEFEGP
Ga0310884_100854113	3300031944	Soil	MTMDETPETVKESVEGQTTPLNVAGAVPQIVSDDLTDDLKILLGEFEGPLDLL
Ga0307416_1003990263	3300032002	Rhizosphere	MDEDTPVEQPTAPLNVAGAVPHIVSDDNTDDLKILLGEFEGPLDLLLHLIRQEQV
Ga0310899_102733011	3300032017	Soil	MTMDETPETAKESVEGQTTPLNVAGAVPQIVSDDLTDDLKILLGEFEGP
Ga0307472_1019358892	3300032205	Hardwood Forest Soil	VDEENPETIVKTSEAPLNVAGAVPKIVSDDVTDDLKILLGEFEGPLDLLLH
Ga0310810_109261601	3300033412	Soil	MDENNPQTPLNVAGAVPQIVSDDDTDDLKILLGEFEGPLDLLLHLI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F046902

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences